Pregenerated sensors for TIMM9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021079Ensembl transcript IDs: ENSMUST00000021486.10, ENSMUST00000166120.9, ENSMUST00000220482.2, ENSMUST00000221367.2, ENSMUST00000221559.2, ENSMUST00000221797.2, ENSMUST00000221815.2, ENSMUST00000221892.2
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAGCAGGGTGCCGGTCAGCATCGGGTCCCCCACGTGTACTCATGTaGCACCACACTCTCACTTCCACAGTTCCAACTGCTCAGGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: EAGCRSASGPPRVLM*HHTLTSTVPTAQGQ Trigger: CTGGCCCTGAGCAGTTGGAACTGTGGAAGTGAGAGTGTGGTGGCACATGAGTACACGTGGGGGACCCGATGCTGACCGGCACCCTGCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR TCA 90 bp | GCTCCTGCTGTGTCAGGGGATTCTCCACCATGTGAATCCTTGTTCTaGCTGCAGCAGCTGCTGGCAATCTTTCAGTGCAAGTCCCCGCCT | + |
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Preference number: 1 (lower is better) Translates to: APAVSGDSPPCESLF*LQQLLAIFQCKSPP Trigger: AGGCGGGGACTTGCACTGAAAGATTGCCAGCAGCTGCTGCAGTCAGAACAAGGATTCACATGGTGGAGAATCCCCTGACACAGCAGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000021486.10 ENSMUST00000166120.9 ENSMUST00000220482.2 ENSMUST00000221367.2 ENSMUST00000221559.2 ENSMUST00000221797.2 ENSMUST00000221892.2 |
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| 3UTR GCA 90 bp | CTGCTGTGTCAGGGGATTCTCCACCATGTGAATCCTTGTTCTGACTaGAGCAGCTGCTGGCAATCTTTCAGTGCAAGTCCCCGCCTCAGG | + |
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Preference number: 1 (lower is better) Translates to: LLCQGILHHVNPCSD*SSCWQSFSASPRLR Trigger: CCTGAGGCGGGGACTTGCACTGAAAGATTGCCAGCAGCTGCTGCAGTCAGAACAAGGATTCACATGGTGGAGAATCCCCTGACACAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000021486.10 ENSMUST00000166120.9 ENSMUST00000220482.2 ENSMUST00000221367.2 ENSMUST00000221559.2 ENSMUST00000221797.2 ENSMUST00000221892.2 |
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| 3UTR TCA 90 bp | ATGGTGGACCACGGCTCCTGCTGTGTCAGGGGATTCTCCACCATGTaGATCCTTGTTCTGACTGCAGCAGCTGCTGGCAATCTTTCAGTG | + |
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Preference number: 1 (lower is better) Translates to: MVDHGSCCVRGFSTM*ILVLTAAAAGNLSV Trigger: CACTGAAAGATTGCCAGCAGCTGCTGCAGTCAGAACAAGGATTCACATGGTGGAGAATCCCCTGACACAGCAGGAGCCGTGGTCCACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000021486.10 ENSMUST00000166120.9 ENSMUST00000220482.2 ENSMUST00000221367.2 ENSMUST00000221559.2 ENSMUST00000221797.2 ENSMUST00000221892.2 |
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| 3UTR GCA 90 bp | CAGGGGATTCTCCACCATGTGAATCCTTGTTCTGACTGCAGCAGCTaGTGGCAATCTTTCAGTGCAAGTCCCCGCCTCAGGACCTCTCTA | + |
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Preference number: 1 (lower is better) Translates to: QGILHHVNPCSDCSS*WQSFSASPRLRTSL Trigger: TAGAGAGGTCCTGAGGCGGGGACTTGCACTGAAAGATTGCCAGCAGCTGCTGCAGTCAGAACAAGGATTCACATGGTGGAGAATCCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221797.2 |
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| 3UTR TCA 90 bp | TCAGGGCCAGACAAAGTGTGTCAGGCTTTTTCAGCAACGCCACCTTaGCAAAGGCAGACAAAGAGCATCTCCTGTGTTGCCAGGTGGTGC | + |
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Preference number: 1 (lower is better) Translates to: SGPDKVCQAFSATPP*QRQTKSISCVARWC Trigger: GCACCACCTGGCAACACAGGAGATGCTCTTTGTCTGCCTTTGTCAAGGTGGCGTTGCTGAAAAAGCCTGACACACTTTGTCTGGCCCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR CCA 90 bp | TGGAAGAAGTCTCTCACTCTGAGCAGATATACAAAGACCCTTATATaGACACTGGAAGCAGGGTGCCGGTCAGCATCGGGTCCCCCACGT | + |
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Preference number: 1 (lower is better) Translates to: WKKSLTLSRYTKTLI*TLEAGCRSASGPPR Trigger: ACGTGGGGGACCCGATGCTGACCGGCACCCTGCTTCCAGTGTCCATATAAGGGTCTTTGTATATCTGCTCAGAGTGAGAGACTTCTTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR CCA 90 bp | GTGTTTTTCTCTGGTGGTTTCCATTGGTCAGGTAGTCATGACAGATaGTGGACCACGGCTCCTGCTGTGTCAGGGGATTCTCCACCATGT | + |
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Preference number: 1 (lower is better) Translates to: VFFSGGFHWSGSHDR*WTTAPAVSGDSPPC Trigger: ACATGGTGGAGAATCCCCTGACACAGCAGGAGCCGTGGTCCACCATCTGTCATGACTACCTGACCAATGGAAACCACCAGAGAAAAACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000021486.10 ENSMUST00000166120.9 ENSMUST00000221367.2 ENSMUST00000221559.2 ENSMUST00000221797.2 ENSMUST00000221892.2 |
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| 3UTR CCA 90 bp | TTTTTCTCTGGTGGTTTCCATTGGTCAGGTAGTCATGACAGATGGTaGACCACGGCTCCTGCTGTGTCAGGGGATTCTCCACCATGTGAA | + |
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Preference number: 1 (lower is better) Translates to: FFSGGFHWSGSHDRW*TTAPAVSGDSPPCE Trigger: TTCACATGGTGGAGAATCCCCTGACACAGCAGGAGCCGTGGTCCACCATCTGTCATGACTACCTGACCAATGGAAACCACCAGAGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000021486.10 ENSMUST00000166120.9 ENSMUST00000221367.2 ENSMUST00000221559.2 ENSMUST00000221797.2 ENSMUST00000221892.2 |
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| 3UTR CCA 90 bp | ACTTGGGAGGCAGAGGCAGGCGGATCTCTAAATTGGAGGCCAGCCTaGTCTACACAGAGAAGAAACCCTGTCTTGAAAAGCCAAAAGGAA | + |
|
Preference number: 1 (lower is better) Translates to: TWEAEAGGSLNWRPA*STQRRNPVLKSQKE Trigger: TTCCTTTTGGCTTTTCAAGACAGGGTTTCTTCTCTGTGTAGACCAGGCTGGCCTCCAATTTAGAGATCCGCCTGCCTCTGCCTCCCAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR GCA 90 bp | ACCTGGCATCTTGGGTTCCTGACTGCTTTAGTTCCTCTAAGCATCTaGATGGAAATGGCAGCCCAGTCAGAAAGAAGAAATGAAGTGCTT | + |
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Preference number: 1 (lower is better) Translates to: TWHLGFLTALVPLSI*MEMAAQSERRNEVL Trigger: AAGCACTTCATTTCTTCTTTCTGACTGGGCTGCCATTTCCATGCAGATGCTTAGAGGAACTAAAGCAGTCAGGAACCCAAGATGCCAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR TCA 90 bp | ATTTGTAAGAATCTTTACTTTCTGGTTAGCCTTTCAGGCAGGGGCTaGAGATTGGATTTACTTTCCAATCCCATGAGCCACCTGTGCACT | + |
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Preference number: 1 (lower is better) Translates to: ICKNLYFLVSLSGRG*RLDLLSNPMSHLCT Trigger: AGTGCACAGGTGGCTCATGGGATTGGAAAGTAAATCCAATCTTCAGCCCCTGCCTGAAAGGCTAACCAGAAAGTAAAGATTCTTACAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221797.2 |
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| 3UTR-3UTR TCA 90 bp | GACACTGGAAGCAGGGTGCCGGTCAGCATCGGGTCCCCCACGTGTACTCATGTGTCAGCAACGCCACCTTaGCAAAGGCAGACAAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: DTGSRVPVSIGSPTCTHVSATPP*QRQTKS Trigger: GCTCTTTGTCTGCCTTTGTCAAGGTGGCGTTGCTGA...CACATGAGTACACGTGGGGGACCCGATGCTGACCGGCACCCTGCTTCCAGTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTTATATGGACACTGGAAGCAGGGTGCCGGTCAGCATCGGGTCCCCCACGTGGGCGGATCTCTAAATTaGAGGCCAGCCTGGTCTACA | + |
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Preference number: 2 (lower is better) Translates to: PLYGHWKQGAGQHRVPHVGGSLN*RPAWST Trigger: TGTAGACCAGGCTGGCCTCCAATTTAGAGATCCGCC...CACGTGGGGGACCCGATGCTGACCGGCACCCTGCTTCCAGTGTCCATATAAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR-3UTR GCA 90 bp | GGTCCCCCACGTGTACTCATGTGCCACCACACTCTCACTTCCACAGTTCCAACTGAGCATCTCCTGTGTTaGCAGGTGGTGCCACACGCC | + |
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Preference number: 2 (lower is better) Translates to: GPPRVLMCHHTLTSTVPTEHLLC*QVVPHA Trigger: GGCGTGTGGCACCACCTGGCAACACAGGAGATGCTC...AGTTGGAACTGTGGAAGTGAGAGTGTGGTGGCACATGAGTACACGTGGGGGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR-3UTR TCA 90 bp | GACACTGGAAGCAGGGTGCCGGTCAGCATCGGGTCCCCCACGTGTACTCATGTGGGCCTTGATGCAGTGTaGCTGTTAAATTCAACCTGG | + |
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Preference number: 2 (lower is better) Translates to: DTGSRVPVSIGSPTCTHVGLDAV*LLNSTW Trigger: CCAGGTTGAATTTAACAGTCACACTGCATCAAGGCC...CACATGAGTACACGTGGGGGACCCGATGCTGACCGGCACCCTGCTTCCAGTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTTATATGGACACTGGAAGCAGGGTGCCGGTCAGCATCGGGTCCCCCACGTGGGCCTTGATGCAGTGTaGCTGTTAAATTCAACCTGG | + |
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Preference number: 2 (lower is better) Translates to: PLYGHWKQGAGQHRVPHVGLDAV*LLNSTW Trigger: CCAGGTTGAATTTAACAGTCACACTGCATCAAGGCC...CACGTGGGGGACCCGATGCTGACCGGCACCCTGCTTCCAGTGTCCATATAAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTGTTGCCAGGTGGTGCCACACGCCTTTGATCCCAGGACTTGGGAGGCAGAGGACTGCAGCAGCTGCTaGCAATCTTTCAGTGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: LCCQVVPHAFDPRTWEAEDCSSC*QSFSAS Trigger: ACTTGCACTGAAAGATTGCCAGCAGCTGCTGCAGTC...CTCTGCCTCCCAAGTCCTGGGATCAAAGGCGTGTGGCACCACCTGGCAACACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221797.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCCCCCACGTGTACTCATGTGCCACCACACTCTCACTTCCACAGTTCCAACTTCCTGTGTTGCCAGGTaGTGCCACACGCCTTTGATC | + |
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Preference number: 2 (lower is better) Translates to: GPPRVLMCHHTLTSTVPTSCVAR*CHTPLI Trigger: GATCAAAGGCGTGTGGCACCACCTGGCAACACAGGA...AGTTGGAACTGTGGAAGTGAGAGTGTGGTGGCACATGAGTACACGTGGGGGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTTATATGGACACTGGAAGCAGGGTGCCGGTCAGCATCGGGTCCCCCACGTGTCTTGGGTTCCTGACTaGTTTAGTTCCTCTAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: PLYGHWKQGAGQHRVPHVSWVPD*FSSSKH Trigger: ATGCTTAGAGGAACTAAAGCAGTCAGGAACCCAAGA...CACGTGGGGGACCCGATGCTGACCGGCACCCTGCTTCCAGTGTCCATATAAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCATGACAGATGGTGGACCACGGCTCCTGCTGTGTCAGGGGATTCTCCACCAGACTGCAGCAGCTGCTaGCAATCTTTCAGTGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: SHDRWWTTAPAVSGDSPPDCSSC*QSFSAS Trigger: ACTTGCACTGAAAGATTGCCAGCAGCTGCTGCAGTC...TGGTGGAGAATCCCCTGACACAGCAGGAGCCGTGGTCCACCATCTGTCATGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000021486.10 ENSMUST00000166120.9 ENSMUST00000220482.2 ENSMUST00000221367.2 ENSMUST00000221559.2 ENSMUST00000221797.2 ENSMUST00000221892.2 |
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| 3UTR-3UTR CCA 90 bp | CTTATATGGACACTGGAAGCAGGGTGCCGGTCAGCATCGGGTCCCCCACGTGTAGCATCTGCATGGAAATaGCAGCCCAGTCAGAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: LIWTLEAGCRSASGPPRVASAWK*QPSQKE Trigger: TTCTTTCTGACTGGGCTGCCATTTCCATGCAGATGC...TACACGTGGGGGACCCGATGCTGACCGGCACCCTGCTTCCAGTGTCCATATAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR CAA 90 bp | CTCAGGGCCAGACAAAGTGTGTCAGGCTTTTTCAGCAACGCCACCTaGACAAAGGCAGACAAAGAGCATCTCCTGTGTTGCCAGGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: LRARQSVSGFFSNAT*TKADKEHLLCCQVV Trigger: CACCACCTGGCAACACAGGAGATGCTCTTTGTCTGCCTTTGTCAAGGTGGCGTTGCTGAAAAAGCCTGACACACTTTGTCTGGCCCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTCCTGTGTTGCCAGGTGGTGCCACACGCCTTTGATCCCAGGACTTGGGAGGGAAGAAACCCTGTCTTaGAAAGCCAAAAGGAACATC | + |
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Preference number: 2 (lower is better) Translates to: ISCVARWCHTPLIPGLGREETLS*KAKRNI Trigger: GATGTTCCTTTTGGCTTTTCAAGACAGGGTTTCTTC...CCTCCCAAGTCCTGGGATCAAAGGCGTGTGGCACCACCTGGCAACACAGGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTTCCATTGGTCAGGTAGTCATGACAGATGGTGGACCACGGCTCCTGCTGTGAATCCTTGTTCTGACTaGAGCAGCTGCTGGCAATCT | + |
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Preference number: 2 (lower is better) Translates to: GFHWSGSHDRWWTTAPAVNPCSD*SSCWQS Trigger: AGATTGCCAGCAGCTGCTGCAGTCAGAACAAGGATT...CACAGCAGGAGCCGTGGTCCACCATCTGTCATGACTACCTGACCAATGGAAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021486.10 ENSMUST00000166120.9 ENSMUST00000221367.2 ENSMUST00000221559.2 ENSMUST00000221797.2 ENSMUST00000221892.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTGCTGGCAATCTTTCAGTGCAAGTCCCCGCCTCAGGACCTCTCTACCGTGGTCTTGGGTTCCTGACTaGTTTAGTTCCTCTAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: SCWQSFSASPRLRTSLPWSWVPD*FSSSKH Trigger: ATGCTTAGAGGAACTAAAGCAGTCAGGAACCCAAGA...CCACGGTAGAGAGGTCCTGAGGCGGGGACTTGCACTGAAAGATTGCCAGCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221797.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGGTGGTTTCCATTGGTCAGGTAGTCATGACAGATGGTGGACCACGGCTCCTGACTGCAGCAGCTGCTaGCAATCTTTCAGTGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: SGGFHWSGSHDRWWTTAPDCSSC*QSFSAS Trigger: ACTTGCACTGAAAGATTGCCAGCAGCTGCTGCAGTC...AGGAGCCGTGGTCCACCATCTGTCATGACTACCTGACCAATGGAAACCACCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021486.10 ENSMUST00000166120.9 ENSMUST00000221367.2 ENSMUST00000221559.2 ENSMUST00000221797.2 ENSMUST00000221892.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTCCATTGGTCAGGTAGTCATGACAGATGGTGGACCACGGCTCCTGCTGTGTGACTGCAGCAGCTGCTaGCAATCTTTCAGTGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: VSIGQVVMTDGGPRLLLCDCSSC*QSFSAS Trigger: ACTTGCACTGAAAGATTGCCAGCAGCTGCTGCAGTC...ACACAGCAGGAGCCGTGGTCCACCATCTGTCATGACTACCTGACCAATGGAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021486.10 ENSMUST00000166120.9 ENSMUST00000221367.2 ENSMUST00000221559.2 ENSMUST00000221797.2 ENSMUST00000221892.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGATATACAAAGACCCTTATATGGACACTGGAAGCAGGGTGCCGGTCAGCATTGTGAATCCTTGTTCTaGCTGCAGCAGCTGCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: ADIQRPLYGHWKQGAGQHCESLF*LQQLLA Trigger: TGCCAGCAGCTGCTGCAGTCAGAACAAGGATTCACA...ATGCTGACCGGCACCCTGCTTCCAGTGTCCATATAAGGGTCTTTGTATATCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221797.2 |
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| 3UTR-3UTR CCA 90 bp | TACAAAGACCCTTATATGGACACTGGAAGCAGGGTGCCGGTCAGCATCGGGTCCTTCAACCTGGCATCTTaGGTTCCTGACTGCTTTAGT | + |
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Preference number: 2 (lower is better) Translates to: YKDPYMDTGSRVPVSIGSFNLAS*VPDCFS Trigger: ACTAAAGCAGTCAGGAACCCAAGATGCCAGGTTGAA...GGACCCGATGCTGACCGGCACCCTGCTTCCAGTGTCCATATAAGGGTCTTTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR-3UTR CCA 90 bp | CACCTTGACAAAGGCAGACAAAGAGCATCTCCTGTGTTGCCAGGTGGTGCCACAAATTGGAGGCCAGCCTaGTCTACACAGAGAAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: HLDKGRQRASPVLPGGATNWRPA*STQRRN Trigger: GTTTCTTCTCTGTGTAGACCAGGCTGGCCTCCAATT...TGTGGCACCACCTGGCAACACAGGAGATGCTCTTTGTCTGCCTTTGTCAAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAGATATACAAAGACCCTTATATGGACACTGGAAGCAGGGTGCCGGTCAGCAGGCGGATCTCTAAATTaGAGGCCAGCCTGGTCTACA | + |
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Preference number: 2 (lower is better) Translates to: SRYTKTLIWTLEAGCRSAGGSLN*RPAWST Trigger: TGTAGACCAGGCTGGCCTCCAATTTAGAGATCCGCC...TGCTGACCGGCACCCTGCTTCCAGTGTCCATATAAGGGTCTTTGTATATCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR-3UTR TCA 90 bp | TACCATTTTTACCGCACAGGAAGGCCTTCTGTTTTGACTCTTTCTGGTGAACAGTGTGAATCCTTGTTCTaGCTGCAGCAGCTGCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: YHFYRTGRPSVLTLSGEQCESLF*LQQLLA Trigger: TGCCAGCAGCTGCTGCAGTCAGAACAAGGATTCACA...CTGTTCACCAGAAAGAGTCAAAACAGAAGGCCTTCCTGTGCGGTAAAAATGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000021486.10 ENSMUST00000166120.9 ENSMUST00000221559.2 ENSMUST00000221797.2 ENSMUST00000221892.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCCTTCTGTTTTGACTCTTTCTGGTGAACAGTGTTTTTCTCTGGTGGTTTCCTGTGAATCCTTGTTCTaGCTGCAGCAGCTGCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: RPSVLTLSGEQCFSLVVSCESLF*LQQLLA Trigger: TGCCAGCAGCTGCTGCAGTCAGAACAAGGATTCACA...GGAAACCACCAGAGAAAAACACTGTTCACCAGAAAGAGTCAAAACAGAAGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000021486.10 ENSMUST00000166120.9 ENSMUST00000221559.2 ENSMUST00000221797.2 ENSMUST00000221892.2 |
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| 3UTR-3UTR GCA 90 bp | CGGTGCTTTCTCTGGGTAGACCTACAAACTGAGCACTATCCTTGGCTTGCAATTAATCCTTGTTCTGACTaGAGCAGCTGCTGGCAATCT | + |
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Preference number: 2 (lower is better) Translates to: RCFLWVDLQTEHYPWLAINPCSD*SSCWQS Trigger: AGATTGCCAGCAGCTGCTGCAGTCAGAACAAGGATT...AATTGCAAGCCAAGGATAGTGCTCAGTTTGTAGGTCTACCCAGAGAAAGCACCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221797.2 |
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| 3UTR-3UTR TCA 90 bp | TCTAAATTGGAGGCCAGCCTGGTCTACACAGAGAAGAAACCCTGTCTTGAAAAGGAAGGCCTTCTGTTTTaGCTCTTTCTGGTGAACAGT | + |
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Preference number: 2 (lower is better) Translates to: SKLEASLVYTEKKPCLEKEGLLF*LFLVNS Trigger: ACTGTTCACCAGAAAGAGTCAAAACAGAAGGCCTTC...CTTTTCAAGACAGGGTTTCTTCTCTGTGTAGACCAGGCTGGCCTCCAATTTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221797.2 |
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| 3UTR-3UTR CCA 90 bp | TACCATTTTTACCGCACAGGAAGGCCTTCTGTTTTGACTCTTTCTGGTGAACAGTCTGGTGGTTTCCATTaGTCAGGTAGTCATGACAGA | + |
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Preference number: 2 (lower is better) Translates to: YHFYRTGRPSVLTLSGEQSGGFH*SGSHDR Trigger: TCTGTCATGACTACCTGACCAATGGAAACCACCAGA...CTGTTCACCAGAAAGAGTCAAAACAGAAGGCCTTCCTGTGCGGTAAAAATGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000021486.10 ENSMUST00000166120.9 ENSMUST00000221559.2 ENSMUST00000221797.2 ENSMUST00000221892.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTTATGCTTTCACCTACTGATGAGAATTAAGGTTTATGAAGTCTCTACAGGTGATGGATTTACTTTGTaGTTTATGACAAACGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: CLCFHLLMRIKVYEVSTGDGFTL*FMTNVG Trigger: CCCCACGTTTGTCATAAATCACAAAGTAAATCCATC...ACCTGTAGAGACTTCATAAACCTTAATTCTCATCAGTAGGTGAAAGCATAAACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221797.2 |
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| 3UTR GCA 72 bp | AGGCAGACAAAGAGCATCTCCTGTGTTGCCAGGTGGTaGCACACGCCTTTGATCCCAGGACTTGGGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: RQTKSISCVARW*HTPLIPGLGRQ Trigger: CTGCCTCCCAAGTCCTGGGATCAAAGGCGTGTGGCACCACCTGGCAACACAGGAGATGCTCTTTGTCTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR GCA 72 bp | TGCCGGTCAGCATCGGGTCCCCCACGTGTACTCATGTaGCACCACACTCTCACTTCCACAGTTCCAACTGCT | + |
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Preference number: 3 (lower is better) Translates to: CRSASGPPRVLM*HHTLTSTVPTA Trigger: AGCAGTTGGAACTGTGGAAGTGAGAGTGTGGTGGCACATGAGTACACGTGGGGGACCCGATGCTGACCGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR-3UTR CAA 90 bp | AGTTCCAACTGCTCAGGGCCAGACAAAGTGTGTCAGGCTTTTTCAGCAACGCCACCCAGGAGGCCTGCTTaGGCTGCCAGGGCTTCATTC | + |
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Preference number: 3 (lower is better) Translates to: SSNCSGPDKVCQAFSATPPRRPA*AARASF Trigger: GAATGAAGCCCTGGCAGCCAAAGCAGGCCTCCTGGG...TGGCGTTGCTGAAAAAGCCTGACACACTTTGTCTGGCCCTGAGCAGTTGGAACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221797.2 |
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| 3UTR CCA 72 bp | CAAAGGCAGACAAAGAGCATCTCCTGTGTTGCCAGGTaGTGCCACACGCCTTTGATCCCAGGACTTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: QRQTKSISCVAR*CHTPLIPGLGR Trigger: CCTCCCAAGTCCTGGGATCAAAGGCGTGTGGCACCACCTGGCAACACAGGAGATGCTCTTTGTCTGCCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR-3UTR CAA 90 bp | CTGTGTTGCCAGGTGGTGCCACACGCCTTTGATCCCAGGACTTGGGAGGCAGAGGGAAGGCCTTCTGTTTaGACTCTTTCTGGTGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: LCCQVVPHAFDPRTWEAEGRPSV*TLSGEQ Trigger: CTGTTCACCAGAAAGAGTCAAAACAGAAGGCCTTCC...CTCTGCCTCCCAAGTCCTGGGATCAAAGGCGTGTGGCACCACCTGGCAACACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221797.2 |
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| 3UTR TCA 72 bp | CACGGCTCCTGCTGTGTCAGGGGATTCTCCACCATGTaGATCCTTGTTCTGACTGCAGCAGCTGCTGGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: HGSCCVRGFSTM*ILVLTAAAAGN Trigger: ATTGCCAGCAGCTGCTGCAGTCAGAACAAGGATTCACATGGTGGAGAATCCCCTGACACAGCAGGAGCCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000021486.10 ENSMUST00000166120.9 ENSMUST00000220482.2 ENSMUST00000221367.2 ENSMUST00000221559.2 ENSMUST00000221797.2 ENSMUST00000221892.2 |
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| 3UTR CCA 72 bp | CACCATGTGAATCCTTGTTCTGACTGCAGCAGCTGCTaGCAATCTTTCAGTGCAAGTCCCCGCCTCAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: HHVNPCSDCSSC*QSFSASPRLRT Trigger: GGTCCTGAGGCGGGGACTTGCACTGAAAGATTGCCAGCAGCTGCTGCAGTCAGAACAAGGATTCACATGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000021486.10 ENSMUST00000166120.9 ENSMUST00000220482.2 ENSMUST00000221367.2 ENSMUST00000221559.2 ENSMUST00000221797.2 ENSMUST00000221892.2 |
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| 3UTR CCA 72 bp | GGTGGTTTCCATTGGTCAGGTAGTCATGACAGATGGTaGACCACGGCTCCTGCTGTGTCAGGGGATTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: GGFHWSGSHDRW*TTAPAVSGDSP Trigger: TGGAGAATCCCCTGACACAGCAGGAGCCGTGGTCCACCATCTGTCATGACTACCTGACCAATGGAAACCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021486.10 ENSMUST00000166120.9 ENSMUST00000221367.2 ENSMUST00000221559.2 ENSMUST00000221797.2 ENSMUST00000221892.2 |
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| 3UTR GCA 72 bp | ACCTTGACAAAGGCAGACAAAGAGCATCTCCTGTGTTaGCAGGTGGTGCCACACGCCTTTGATCCCAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: TLTKADKEHLLC*QVVPHAFDPRT Trigger: AGTCCTGGGATCAAAGGCGTGTGGCACCACCTGGCAACACAGGAGATGCTCTTTGTCTGCCTTTGTCAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR CCA 72 bp | GCAGAGGCAGGCGGATCTCTAAATTGGAGGCCAGCCTaGTCTACACAGAGAAGAAACCCTGTCTTGAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: AEAGGSLNWRPA*STQRRNPVLKS Trigger: GCTTTTCAAGACAGGGTTTCTTCTCTGTGTAGACCAGGCTGGCCTCCAATTTAGAGATCCGCCTGCCTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR-3UTR CAA 90 bp | ATCTCCTGTGTTGCCAGGTGGTGCCACACGCCTTTGATCCCAGGACTTGGGAGGAGAAGAAACCCTGTCTaGAAAAGCCAAAAGGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: ISCVARWCHTPLIPGLGRRRNPV*KSQKEH Trigger: ATGTTCCTTTTGGCTTTTCAAGACAGGGTTTCTTCT...CCTCCCAAGTCCTGGGATCAAAGGCGTGTGGCACCACCTGGCAACACAGGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR TCA 72 bp | ACCAGGAACAATAGTGTGCTCTCTGCCCAGCCTTCGTaGCAAACTAGATTTGGCTGGGCTTCAGTCTGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: TRNNSVLSAQPS*QTRFGWASVWS Trigger: ACTCCAGACTGAAGCCCAGCCAAATCTAGTTTGTCACGAAGGCTGGGCAGAGAGCACACTATTGTTCCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221797.2 |
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| 3UTR GCA 72 bp | CATGTGCCACCACACTCTCACTTCCACAGTTCCAACTaGTCAGGGCCAGACAAAGTGTGTCAGGCTTTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: HVPPHSHFHSSN*SGPDKVCQAFS Trigger: TGAAAAAGCCTGACACACTTTGTCTGGCCCTGAGCAGTTGGAACTGTGGAAGTGAGAGTGTGGTGGCACATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR CCA 72 bp | TCTCTCACTCTGAGCAGATATACAAAGACCCTTATATaGACACTGGAAGCAGGGTGCCGGTCAGCATCGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SLTLSRYTKTLI*TLEAGCRSASG Trigger: ACCCGATGCTGACCGGCACCCTGCTTCCAGTGTCCATATAAGGGTCTTTGTATATCTGCTCAGAGTGAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR TCA 72 bp | GGCCAGCCTGGTCTACACAGAGAAGAAACCCTGTCTTaGAAAGCCAAAAGGAACATCTGCTCTGGAACCACA | + |
|
Preference number: 3 (lower is better) Translates to: GQPGLHREETLS*KAKRNICSGTT Trigger: TGTGGTTCCAGAGCAGATGTTCCTTTTGGCTTTTCAAGACAGGGTTTCTTCTCTGTGTAGACCAGGCTGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR TCA 72 bp | GACAAAGTGTGTCAGGCTTTTTCAGCAACGCCACCTTaGCAAAGGCAGACAAAGAGCATCTCCTGTGTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: DKVCQAFSATPP*QRQTKSISCVA Trigger: GGCAACACAGGAGATGCTCTTTGTCTGCCTTTGTCAAGGTGGCGTTGCTGAAAAAGCCTGACACACTTTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR CCA 72 bp | ATCTGCTCTGGAACCACAACTCAGCTGCTCCATACTTaGTCTATAAAACGGTCGGCCTTGATGCAGTGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: ICSGTTTQLLHT*SIKRSALMQCD Trigger: GTCACACTGCATCAAGGCCGACCGTTTTATAGACCAAGTATGGAGCAGCTGAGTTGTGGTTCCAGAGCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR TCA 72 bp | CCGCACAGGAAGGCCTTCTGTTTTGACTCTTTCTGGTaGACAGTGTTTTTCTCTGGTGGTTTCCATTGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PHRKAFCFDSFW*TVFFSGGFHWS Trigger: TGACCAATGGAAACCACCAGAGAAAAACACTGTTCACCAGAAAGAGTCAAAACAGAAGGCCTTCCTGTGCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000021486.10 ENSMUST00000166120.9 ENSMUST00000221559.2 ENSMUST00000221797.2 ENSMUST00000221892.2 |
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| 3UTR TCA 72 bp | TACTTGGTCTATAAAACGGTCGGCCTTGATGCAGTGTaGCTGTTAAATTCAACCTGGCATCTTGGGTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: YLVYKTVGLDAV*LLNSTWHLGFL Trigger: CAGGAACCCAAGATGCCAGGTTGAATTTAACAGTCACACTGCATCAAGGCCGACCGTTTTATAGACCAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR TCA 72 bp | CAGGGAGCGGTGCTTTCTCTGGGTAGACCTACAAACTaGGCACTATCCTTGGCTTGCAATTTTATAGCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: QGAVLSLGRPTN*ALSLACNFIAL Trigger: TAAAGCTATAAAATTGCAAGCCAAGGATAGTGCTCAGTTTGTAGGTCTACCCAGAGAAAGCACCGCTCCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221797.2 |
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| 3UTR TCA 72 bp | TCCAAAAGGCAACACAAAATAATCATTTCTGTATTCTaGAGGAGCCACCACAGGGAGCGGTGCTTTCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SKRQHKIIISVF*RSHHRERCFLW Trigger: CCAGAGAAAGCACCGCTCCCTGTGGTGGCTCCTTCAGAATACAGAAATGATTATTTTGTGTTGCCTTTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221797.2 |
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| 3UTR CCA 72 bp | AACCCTGTCTTGAAAAGCCAAAAGGAACATCTGCTCTaGAACCACAACTCAGCTGCTCCATACTTGGTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: NPVLKSQKEHLL*NHNSAAPYLVY Trigger: ATAGACCAAGTATGGAGCAGCTGAGTTGTGGTTCCAGAGCAGATGTTCCTTTTGGCTTTTCAAGACAGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR TCA 72 bp | AATTACCTAACAACTAGATCTGGGCATGCAGTTTACTaGCTTCTCTGCTGGAAGAAGTCTCTCACTCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: NYLTTRSGHAVY*LLCWKKSLTLS Trigger: GCTCAGAGTGAGAGACTTCTTCCAGCAGAGAAGTCAGTAAACTGCATGCCCAGATCTAGTTGTTAGGTAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR TCA 72 bp | AATCTTTACTTTCTGGTTAGCCTTTCAGGCAGGGGCTaGAGATTGGATTTACTTTCCAATCCCATGAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: NLYFLVSLSGRG*RLDLLSNPMSH Trigger: GTGGCTCATGGGATTGGAAAGTAAATCCAATCTTCAGCCCCTGCCTGAAAGGCTAACCAGAAAGTAAAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221797.2 |
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| 3UTR GCA 72 bp | ACTGTTAAATTCAACCTGGCATCTTGGGTTCCTGACTaGTTTAGTTCCTCTAAGCATCTGCATGGAAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: TVKFNLASWVPD*FSSSKHLHGNG Trigger: GCCATTTCCATGCAGATGCTTAGAGGAACTAAAGCAGTCAGGAACCCAAGATGCCAGGTTGAATTTAACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR TCA 72 bp | TTTACTGACTTCTCTGCTGGAAGAAGTCTCTCACTCTaGGCAGATATACAAAGACCCTTATATGGACACTGG | + |
|
Preference number: 3 (lower is better) Translates to: FTDFSAGRSLSL*ADIQRPLYGHW Trigger: CCAGTGTCCATATAAGGGTCTTTGTATATCTGCTCAGAGTGAGAGACTTCTTCCAGCAGAGAAGTCAGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR CCA 72 bp | GAGGAGGTAACTATGGTGATAAGGAAGGATGGATTGTaGGCAAAAGGACATACCTCAGTCATGATAGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: EEVTMVIRKDGL*AKGHTSVMIEK Trigger: TTTCTCTATCATGACTGAGGTATGTCCTTTTGCCCACAATCCATCCTTCCTTATCACCATAGTTACCTCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221797.2 |
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| CDS-3UTR GCA 90 bp | AGTCATGACAGATGGTGGACCACGGCTCCTGCTGTGTCAGGGGATTCTCCACCAGCCAGGGCTTCATTCTaGTCTTCAGGTTTCACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHDRWWTTAPAVSGDSPPARASF*SSGFTS Trigger: AGAGGTGAAACCTGAAGAGCAGAATGAAGCCCTGGC...TGGTGGAGAATCCCCTGACACAGCAGGAGCCGTGGTCCACCATCTGTCATGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221892.2 |
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| 3UTR CAA 72 bp | AGGCCAGCCTGGTCTACACAGAGAAGAAACCCTGTCTaGAAAAGCCAAAAGGAACATCTGCTCTGGAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: RPAWSTQRRNPV*KSQKEHLLWNH Trigger: GTGGTTCCAGAGCAGATGTTCCTTTTGGCTTTTCAAGACAGGGTTTCTTCTCTGTGTAGACCAGGCTGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000221797.2 ENSMUST00000221815.2 |
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| 3UTR CAA 72 bp | TCTTACCATTTTTACCGCACAGGAAGGCCTTCTGTTTaGACTCTTTCTGGTGAACAGTGTTTTTCTCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SYHFYRTGRPSV*TLSGEQCFSLV Trigger: CACCAGAGAAAAACACTGTTCACCAGAAAGAGTCAAAACAGAAGGCCTTCCTGTGCGGTAAAAATGGTAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000021486.10 ENSMUST00000166120.9 ENSMUST00000221559.2 ENSMUST00000221797.2 ENSMUST00000221892.2 |
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| CDS-3UTR CAA 90 bp | CTGACTGCAGCAGCTGCTGGCAATCTTTCAGTGCAAGTCCCCGCCTCAGGACCTCCCAGGAGGCCTGCTTaGGCTGCCAGGGCTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: LTAAAAGNLSVQVPASGPPRRPA*AARASF Trigger: GAATGAAGCCCTGGCAGCCAAAGCAGGCCTCCTGGG...AGGTCCTGAGGCGGGGACTTGCACTGAAAGATTGCCAGCAGCTGCTGCAGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021486.10 ENSMUST00000166120.9 ENSMUST00000220482.2 ENSMUST00000221367.2 ENSMUST00000221559.2 ENSMUST00000221892.2 |
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| CDS-3UTR CAA 90 bp | GTAGTCATGACAGATGGTGGACCACGGCTCCTGCTGTGTCAGGGGATTCTCCACCCCAGGAGGCCTGCTTaGGCTGCCAGGGCTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: VVMTDGGPRLLLCQGILHPRRPA*AARASF Trigger: GAATGAAGCCCTGGCAGCCAAAGCAGGCCTCCTGGG...GTGGAGAATCCCCTGACACAGCAGGAGCCGTGGTCCACCATCTGTCATGACTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000021486.10 ENSMUST00000166120.9 ENSMUST00000220482.2 ENSMUST00000221367.2 ENSMUST00000221559.2 ENSMUST00000221892.2 |
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| CDS-3UTR CAA 90 bp | CTTGTTCTGACTGCAGCAGCTGCTGGCAATCTTTCAGTGCAAGTCCCCGCCTCACCCAGGAGGCCTGCTTaGGCTGCCAGGGCTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: LVLTAAAAGNLSVQVPASPRRPA*AARASF Trigger: GAATGAAGCCCTGGCAGCCAAAGCAGGCCTCCTGGG...TGAGGCGGGGACTTGCACTGAAAGATTGCCAGCAGCTGCTGCAGTCAGAACAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000021486.10 ENSMUST00000166120.9 ENSMUST00000220482.2 ENSMUST00000221367.2 ENSMUST00000221559.2 ENSMUST00000221892.2 |
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| CDS-3UTR CAA 90 bp | GGTGGTTTCCATTGGTCAGGTAGTCATGACAGATGGTGGACCACGGCTCCTGCTCCCAGGAGGCCTGCTTaGGCTGCCAGGGCTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: GGFHWSGSHDRWWTTAPAPRRPA*AARASF Trigger: GAATGAAGCCCTGGCAGCCAAAGCAGGCCTCCTGGG...AGCAGGAGCCGTGGTCCACCATCTGTCATGACTACCTGACCAATGGAAACCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021486.10 ENSMUST00000166120.9 ENSMUST00000221367.2 ENSMUST00000221559.2 ENSMUST00000221892.2 |
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| CDS-3UTR CAA 90 bp | AGGCCTTCTGTTTTGACTCTTTCTGGTGAACAGTGTTTTTCTCTGGTGGTTTCCCCCAGGAGGCCTGCTTaGGCTGCCAGGGCTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: RPSVLTLSGEQCFSLVVSPRRPA*AARASF Trigger: GAATGAAGCCCTGGCAGCCAAAGCAGGCCTCCTGGG...GGAAACCACCAGAGAAAAACACTGTTCACCAGAAAGAGTCAAAACAGAAGGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000021486.10 ENSMUST00000166120.9 ENSMUST00000221559.2 ENSMUST00000221892.2 |
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