Pregenerated sensors for TIMM50 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003438Ensembl transcript IDs: ENSMUST00000081946.5
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCACTCATGGCACCCAGCCCTGTGGTGGTGCTCAGTCACTGTGAATaGCGACCGAGTCCAAGACCTCACCCCAGTGCCCCATCTGGACTC | + |
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Preference number: 1 (lower is better) Translates to: ALMAPSPVVVLSHCE*RPSPRPHPSAPSGL Trigger: GAGTCCAGATGGGGCACTGGGGTGAGGTCTTGGACTCGGTCGTCATTCACAGTGACTGAGCACCACCACAGGGCTGGGTGCCATGAGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| 3UTR CCA 90 bp | AGGAGCCCCACTCCAACGAGGCACTCATGGCACCCAGCCCTGTGGTaGTGCTCAGTCACTGTGAATGACGACCGAGTCCAAGACCTCACC | + |
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Preference number: 1 (lower is better) Translates to: RSPTPTRHSWHPALW*CSVTVNDDRVQDLT Trigger: GGTGAGGTCTTGGACTCGGTCGTCATTCACAGTGACTGAGCACCACCACAGGGCTGGGTGCCATGAGTGCCTCGTTGGAGTGGGGCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| 3UTR CCA 90 bp | TTTCAGTTTCAGGCTGGCAGGAGCCCCACTCCAACGAGGCACTCATaGCACCCAGCCCTGTGGTGGTGCTCAGTCACTGTGAATGACGAC | + |
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Preference number: 1 (lower is better) Translates to: FQFQAGRSPTPTRHS*HPALWWCSVTVNDD Trigger: GTCGTCATTCACAGTGACTGAGCACCACCACAGGGCTGGGTGCCATGAGTGCCTCGTTGGAGTGGGGCTCCTGCCAGCCTGAAACTGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| 3UTR CCA 90 bp | ATGGGAAGACATGTGCAGCAGAAACCCAGGTTTTCAGTTTCAGGCTaGCAGGAGCCCCACTCCAACGAGGCACTCATGGCACCCAGCCCT | + |
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Preference number: 1 (lower is better) Translates to: MGRHVQQKPRFSVSG*QEPHSNEALMAPSP Trigger: AGGGCTGGGTGCCATGAGTGCCTCGTTGGAGTGGGGCTCCTGCCAGCCTGAAACTGAAAACCTGGGTTTCTGCTGCACATGTCTTCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| 3UTR CCA 90 bp | ACCCCAGTGCCCCATCTGGACTCTGGACACAGGCATTGTGGCATCTaGGACTCGCTTTATTGGACACATAGCTGTCCACACTTTGCCGTG | + |
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Preference number: 1 (lower is better) Translates to: TPVPHLDSGHRHCGI*DSLYWTHSCPHFAV Trigger: CACGGCAAAGTGTGGACAGCTATGTGTCCAATAAAGCGAGTCCCAGATGCCACAATGCCTGTGTCCAGAGTCCAGATGGGGCACTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| 3UTR GCA 90 bp | AGAGCCAGAGAAAGAGGGAGGGAGAGAGAGAGAGGGGCTTTTCTTTaGCAACTCATAGAGTATATGGGAAGACATGTGCAGCAGAAACCC | + |
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Preference number: 1 (lower is better) Translates to: RARERGRERERGAFL*QLIEYMGRHVQQKP Trigger: GGGTTTCTGCTGCACATGTCTTCCCATATACTCTATGAGTTGGCAAAGAAAAGCCCCTCTCTCTCTCTCCCTCCCTCTTTCTCTGGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| 3UTR-3UTR CCA 90 bp | CTCACCCCAGTGCCCCATCTGGACTCTGGACACAGGCATTGTGGCATCTGGGACTTGCCGTGTAAGGGCTaGGGCCCAAGGCTCAGGCAT | + |
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Preference number: 2 (lower is better) Translates to: LTPVPHLDSGHRHCGIWDLPCKG*GPRLRH Trigger: ATGCCTGAGCCTTGGGCCCCAGCCCTTACACGGCAA...GTCCCAGATGCCACAATGCCTGTGTCCAGAGTCCAGATGGGGCACTGGGGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| 3UTR-3UTR CCA 90 bp | TCAGTTTCAGGCTGGCAGGAGCCCCACTCCAACGAGGCACTCATGGCACCCAGCTGGGACTCGCTTTATTaGACACATAGCTGTCCACAC | + |
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Preference number: 2 (lower is better) Translates to: SVSGWQEPHSNEALMAPSWDSLY*THSCPH Trigger: GTGTGGACAGCTATGTGTCCAATAAAGCGAGTCCCA...GCTGGGTGCCATGAGTGCCTCGTTGGAGTGGGGCTCCTGCCAGCCTGAAACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| 3UTR-3UTR CCA 90 bp | ATGTGCAGCAGAAACCCAGGTTTTCAGTTTCAGGCTGGCAGGAGCCCCACTCCACACCCAGCCCTGTGGTaGTGCTCAGTCACTGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: MCSRNPGFQFQAGRSPTPHPALW*CSVTVN Trigger: ATTCACAGTGACTGAGCACCACCACAGGGCTGGGTG...TGGAGTGGGGCTCCTGCCAGCCTGAAACTGAAAACCTGGGTTTCTGCTGCACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| 3UTR-3UTR CCA 90 bp | CGGCTCCCCAGAGGCCAGACTTCTCTTTATTTCTACAGCACACAAGGAGTCCAGTTTTCAGTTTCAGGCTaGCAGGAGCCCCACTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: RLPRGQTSLYFYSTQGVQFSVSG*QEPHSN Trigger: GTTGGAGTGGGGCTCCTGCCAGCCTGAAACTGAAAA...CTGGACTCCTTGTGTGCTGTAGAAATAAAGAGAAGTCTGGCCTCTGGGGAGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| 3UTR CAA 90 bp | CAGAGCCAGAGAAAGAGGGAGGGAGAGAGAGAGAGGGGCTTTTCTTaGCCAACTCATAGAGTATATGGGAAGACATGTGCAGCAGAAACC | + |
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Preference number: 2 (lower is better) Translates to: QSQRKREGERERGFS*PTHRVYGKTCAAET Trigger: GGTTTCTGCTGCACATGTCTTCCCATATACTCTATGAGTTGGCAAAGAAAAGCCCCTCTCTCTCTCTCCCTCCCTCTTTCTCTGGCTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| 3UTR-3UTR CCA 90 bp | GAGAGAGAGAGGGGCTTTTCTTTGCCAACTCATAGAGTATATGGGAAGACATGTCCCCAGTGCCCCATCTaGACTCTGGACACAGGCATT | + |
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Preference number: 2 (lower is better) Translates to: ERERGFSLPTHRVYGKTCPQCPI*TLDTGI Trigger: AATGCCTGTGTCCAGAGTCCAGATGGGGCACTGGGG...ACATGTCTTCCCATATACTCTATGAGTTGGCAAAGAAAAGCCCCTCTCTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| 3UTR CCA 72 bp | CAGGCTGGCAGGAGCCCCACTCCAACGAGGCACTCATaGCACCCAGCCCTGTGGTGGTGCTCAGTCACTGTG | + |
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Preference number: 3 (lower is better) Translates to: QAGRSPTPTRHS*HPALWWCSVTV Trigger: CACAGTGACTGAGCACCACCACAGGGCTGGGTGCCATGAGTGCCTCGTTGGAGTGGGGCTCCTGCCAGCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| 3UTR-3UTR CAA 90 bp | AGTTTCAGGCTGGCAGGAGCCCCACTCCAACGAGGCACTCATGGCACCCAGCCCCTCTGGACACAGGCATaGTGGCATCTGGGACTCGCT | + |
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Preference number: 3 (lower is better) Translates to: SFRLAGAPLQRGTHGTQPLWTQA*WHLGLA Trigger: AGCGAGTCCCAGATGCCACAATGCCTGTGTCCAGAG...GGGCTGGGTGCCATGAGTGCCTCGTTGGAGTGGGGCTCCTGCCAGCCTGAAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| 3UTR TCA 72 bp | GCACCCAGCCCTGTGGTGGTGCTCAGTCACTGTGAATaGCGACCGAGTCCAAGACCTCACCCCAGTGCCCCA | + |
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Preference number: 3 (lower is better) Translates to: APSPVVVLSHCE*RPSPRPHPSAP Trigger: TGGGGCACTGGGGTGAGGTCTTGGACTCGGTCGTCATTCACAGTGACTGAGCACCACCACAGGGCTGGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| 3UTR TCA 72 bp | CATGGCACCCAGCCCTGTGGTGGTGCTCAGTCACTGTaGATGACGACCGAGTCCAAGACCTCACCCCAGTGC | + |
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Preference number: 3 (lower is better) Translates to: HGTQPCGGAQSL*MTTESKTSPQC Trigger: GCACTGGGGTGAGGTCTTGGACTCGGTCGTCATTCACAGTGACTGAGCACCACCACAGGGCTGGGTGCCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| 3UTR GCA 72 bp | CCAACGAGGCACTCATGGCACCCAGCCCTGTGGTGGTaGTCAGTCACTGTGAATGACGACCGAGTCCAAGAC | + |
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Preference number: 3 (lower is better) Translates to: PTRHSWHPALWW*SVTVNDDRVQD Trigger: GTCTTGGACTCGGTCGTCATTCACAGTGACTGAGCACCACCACAGGGCTGGGTGCCATGAGTGCCTCGTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| 3UTR CCA 72 bp | ACGACCGAGTCCAAGACCTCACCCCAGTGCCCCATCTaGACTCTGGACACAGGCATTGTGGCATCTGGGACT | + |
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Preference number: 3 (lower is better) Translates to: TTESKTSPQCPI*TLDTGIVASGT Trigger: AGTCCCAGATGCCACAATGCCTGTGTCCAGAGTCCAGATGGGGCACTGGGGTGAGGTCTTGGACTCGGTCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| 3UTR CCA 72 bp | ACTCCAACGAGGCACTCATGGCACCCAGCCCTGTGGTaGTGCTCAGTCACTGTGAATGACGACCGAGTCCAA | + |
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Preference number: 3 (lower is better) Translates to: TPTRHSWHPALW*CSVTVNDDRVQ Trigger: TTGGACTCGGTCGTCATTCACAGTGACTGAGCACCACCACAGGGCTGGGTGCCATGAGTGCCTCGTTGGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| 3UTR CCA 72 bp | GGACACATAGCTGTCCACACTTTGCCGTGTAAGGGCTaGGGCCCAAGGCTCAGGCATCAAGTCTCTGAGGAA | + |
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Preference number: 3 (lower is better) Translates to: GHIAVHTLPCKG*GPRLRHQVSEE Trigger: TTCCTCAGAGACTTGATGCCTGAGCCTTGGGCCCCAGCCCTTACACGGCAAAGTGTGGACAGCTATGTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| 3UTR CCA 72 bp | CATGTGCAGCAGAAACCCAGGTTTTCAGTTTCAGGCTaGCAGGAGCCCCACTCCAACGAGGCACTCATGGCA | + |
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Preference number: 3 (lower is better) Translates to: HVQQKPRFSVSG*QEPHSNEALMA Trigger: TGCCATGAGTGCCTCGTTGGAGTGGGGCTCCTGCCAGCCTGAAACTGAAAACCTGGGTTTCTGCTGCACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| 3UTR CCA 72 bp | CCCCATCTGGACTCTGGACACAGGCATTGTGGCATCTaGGACTCGCTTTATTGGACACATAGCTGTCCACAC | + |
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Preference number: 3 (lower is better) Translates to: PHLDSGHRHCGI*DSLYWTHSCPH Trigger: GTGTGGACAGCTATGTGTCCAATAAAGCGAGTCCCAGATGCCACAATGCCTGTGTCCAGAGTCCAGATGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR GCA 90 bp | GGAGCCCCACTCCAACGAGGCACTCATGGCACCCAGCCCTGTGGTGGTGCTCAGAGCTCGGCCAGGCGCTaGTGCTCCTCCTGCTCAAGC | + |
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Preference number: 4 (lower is better) Translates to: GAPLQRGTHGTQPCGGAQSSARR*CSSCSS Trigger: GCTTGAGCAGGAGGAGCAGCAGCGCCTGGCCGAGCT...CTGAGCACCACCACAGGGCTGGGTGCCATGAGTGCCTCGTTGGAGTGGGGCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR GCA 90 bp | CCCACTCCAACGAGGCACTCATGGCACCCAGCCCTGTGGTGGTGCTCAGTCACTTCGGCCAGGCGCTGCTaGTCCTCCTGCTCAAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: PTPTRHSWHPALWWCSVTSARRC*SSCSSR Trigger: CCGGCTTGAGCAGGAGGAGCAGCAGCGCCTGGCCGA...AGTGACTGAGCACCACCACAGGGCTGGGTGCCATGAGTGCCTCGTTGGAGTGGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR CCA 90 bp | CTCACCCCAGTGCCCCATCTGGACTCTGGACACAGGCATTGTGGCATCTGGGACGTGGCCCCTGGGCCTTaGAGCCCCCACGGTTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: LTPVPHLDSGHRHCGIWDVAPGP*SPHGWQ Trigger: TTGCCAACCGTGGGGGCTCCAAGGCCCAGGGGCCAC...GTCCCAGATGCCACAATGCCTGTGTCCAGAGTCCAGATGGGGCACTGGGGTGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR GCA 90 bp | CTCACCCCAGTGCCCCATCTGGACTCTGGACACAGGCATTGTGGCATCTGGGACCCCGGTCATCTGAGTTaGCATCCCAGGGCCGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LTPVPHLDSGHRHCGIWDPGHLS*HPRAAG Trigger: CCCTGCGGCCCTGGGATGGCAACTCAGATGACCGGG...GTCCCAGATGCCACAATGCCTGTGTCCAGAGTCCAGATGGGGCACTGGGGTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR GCA 90 bp | CAGTTTCAGGCTGGCAGGAGCCCCACTCCAACGAGGCACTCATGGCACCCAGCCCCAAAGGAGAGGCCCTaGCTGTTGGACTTGGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: QFQAGRSPTPTRHSWHPAPKERP*LLDLES Trigger: GCTCTCCAAGTCCAACAGGCAGGGCCTCTCCTTTGG...GGCTGGGTGCCATGAGTGCCTCGTTGGAGTGGGGCTCCTGCCAGCCTGAAACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR CCA 90 bp | ACCCCAGTGCCCCATCTGGACTCTGGACACAGGCATTGTGGCATCTGGGACTCGAGAGGCCCTGCCTGTTaGACTTGGAGAGCTCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TPVPHLDSGHRHCGIWDSRGPAC*TWRARP Trigger: TGGCCGAGCTCTCCAAGTCCAACAGGCAGGGCCTCT...CGAGTCCCAGATGCCACAATGCCTGTGTCCAGAGTCCAGATGGGGCACTGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR GCA 90 bp | TCAGTTTCAGGCTGGCAGGAGCCCCACTCCAACGAGGCACTCATGGCACCCAGCCTGCCGCTGTTTGAATaGCTCCAGTGGGTCATCCTC | + |
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Preference number: 4 (lower is better) Translates to: SVSGWQEPHSNEALMAPSLPLFE*LQWVIL Trigger: GAGGATGACCCACTGGAGGCATTCAAACAGCGGCAG...GCTGGGTGCCATGAGTGCCTCGTTGGAGTGGGGCTCCTGCCAGCCTGAAACTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR TCA 90 bp | AGGAGTCCAGAGCCAGAGAAAGAGGGAGGGAGAGAGAGAGAGGGGCTTTTCTTTCAGTCGGCTGGCGAGTaGGCCAAAGGAGAGGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: RSPEPEKEGGREREGLFFQSAGE*AKGEAL Trigger: CAGGGCCTCTCCTTTGGCTCACTCGCCAGCCGACTG...AAAGAAAAGCCCCTCTCTCTCTCTCCCTCCCTCTTTCTCTGGCTCTGGACTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR CCA 90 bp | GCCCCATCTGGACTCTGGACACAGGCATTGTGGCATCTGGGACTCGCTTTATTGCCTGCCTGTTGGACTTaGAGAGCTCGGCCAGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: APSGLWTQALWHLGLALLPACWT*RARPGA Trigger: AGCGCCTGGCCGAGCTCTCCAAGTCCAACAGGCAGG...CAATAAAGCGAGTCCCAGATGCCACAATGCCTGTGTCCAGAGTCCAGATGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR TCA 90 bp | TTTCAGGCTGGCAGGAGCCCCACTCCAACGAGGCACTCATGGCACCCAGCCCTGGACTGGTGGGCTCGATaGTCATCTGTCTGTAATCTT | + |
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Preference number: 4 (lower is better) Translates to: FQAGRSPTPTRHSWHPALDWWAR*SSVCNL Trigger: AAGATTACAGACAGATGATCATCGAGCCCACCAGTC...CAGGGCTGGGTGCCATGAGTGCCTCGTTGGAGTGGGGCTCCTGCCAGCCTGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR CCA 90 bp | TGGTGCTCAGTCACTGTGAATGACGACCGAGTCCAAGACCTCACCCCAGTGCCCCCTCCATATATCTGGTaGCGTCCCGGAACAGACGGT | + |
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Preference number: 4 (lower is better) Translates to: WCSVTVNDDRVQDLTPVPPPYIW*RPGTDG Trigger: ACCGTCTGTTCCGGGACGCCACCAGATATATGGAGG...GGGCACTGGGGTGAGGTCTTGGACTCGGTCGTCATTCACAGTGACTGAGCACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR GCA 90 bp | GAGGCGGCTCCCCAGAGGCCAGACTTCTCTTTATTTCTACAGCACACAAGGAGTAGCGACCACTCTGGGTaGAGAAGGACCCCGGTAAGC | + |
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Preference number: 4 (lower is better) Translates to: EAAPQRPDFSLFLQHTRSSDHSG*RRTPVS Trigger: GCTTACCGGGGTCCTTCTGCACCCAGAGTGGTCGCT...ACTCCTTGTGTGCTGTAGAAATAAAGAGAAGTCTGGCCTCTGGGGAGCCGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR CCA 90 bp | GGAGCCCCACTCCAACGAGGCACTCATGGCACCCAGCCCTGTGGTGGTGCTCAGCACACTATCAATGAGTaGAAATGCAGTCATGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: GAPLQRGTHGTQPCGGAQHTINE*KCSHAS Trigger: ACTGGCATGACTGCATTTCCACTCATTGATAGTGTG...CTGAGCACCACCACAGGGCTGGGTGCCATGAGTGCCTCGTTGGAGTGGGGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR CCA 90 bp | TCGAGGCGGCTCCCCAGAGGCCAGACTTCTCTTTATTTCTACAGCACACAAGGAGAGGCCACAGTCGGCTaGCGAGTGAGCCAAAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SRRLPRGQTSLYFYSTQGEATVG*RVSQRR Trigger: TCTCCTTTGGCTCACTCGCCAGCCGACTGTGGCCTC...TCCTTGTGTGCTGTAGAAATAAAGAGAAGTCTGGCCTCTGGGGAGCCGCCTCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| 3UTR CAA 72 bp | GGGACTCGCTTTATTGGACACATAGCTGTCCACACTTaGCCGTGTAAGGGCTGGGGCCCAAGGCTCAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: GTRFIGHIAVHT*PCKGWGPRLRH Trigger: ATGCCTGAGCCTTGGGCCCCAGCCCTTACACGGCAAAGTGTGGACAGCTATGTGTCCAATAAAGCGAGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR TCA 90 bp | GTTTCAGGCTGGCAGGAGCCCCACTCCAACGAGGCACTCATGGCACCCAGCCCTAGTCATGCCAGTCTCTaGTGTGAAGATGACTATTTC | + |
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Preference number: 4 (lower is better) Translates to: VSGWQEPHSNEALMAPSPSHASL*CEDDYF Trigger: GAAATAGTCATCTTCACATCAGAGACTGGCATGACT...AGGGCTGGGTGCCATGAGTGCCTCGTTGGAGTGGGGCTCCTGCCAGCCTGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR CCA 90 bp | GAGTCCAGAGCCAGAGAAAGAGGGAGGGAGAGAGAGAGAGGGGCTTTTCTTTGCGTCCCTCCATATATCTaGTGGCGTCCCGGAACAGAC | + |
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Preference number: 4 (lower is better) Translates to: ESRARERGRERERGAFLCVPPYI*WRPGTD Trigger: GTCTGTTCCGGGACGCCACCAGATATATGGAGGGAC...GCAAAGAAAAGCCCCTCTCTCTCTCTCCCTCCCTCTTTCTCTGGCTCTGGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR TCA 90 bp | AGAAACCCAGGTTTTCAGTTTCAGGCTGGCAGGAGCCCCACTCCAACGAGGCACAAATATAGACGATGCTaGCAGTCCCACCAGCTCCGA | + |
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Preference number: 4 (lower is better) Translates to: RNPGFQFQAGRSPTPTRHKYRRC*QSHQLR Trigger: TCGGAGCTGGTGGGACTGTCAGCATCGTCTATATTT...GTGCCTCGTTGGAGTGGGGCTCCTGCCAGCCTGAAACTGAAAACCTGGGTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR GCA 90 bp | GAGAGAGAGAGGGGCTTTTCTTTGCCAACTCATAGAGTATATGGGAAGACATGTTCGGAGCCTGGCTGGTaGTGTGGCCCCTGGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: ERERGFSLPTHRVYGKTCSEPGW*CGPWAL Trigger: CAAGGCCCAGGGGCCACAGCACCAGCCAGGCTCCGA...ACATGTCTTCCCATATACTCTATGAGTTGGCAAAGAAAAGCCCCTCTCTCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR CCA 90 bp | CCCTCGAGGCGGCTCCCCAGAGGCCAGACTTCTCTTTATTTCTACAGCACACAACGGACGTCCTCCACTTaGTTCAGTGCAATGGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: PSRRLPRGQTSLYFYSTQRTSST*FSAMVL Trigger: CAAGACCATTGCACTGAACCAAGTGGAGGACGTCCG...TTGTGTGCTGTAGAAATAAAGAGAAGTCTGGCCTCTGGGGAGCCGCCTCGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR GCA 90 bp | GTGCAGCAGAAACCCAGGTTTTCAGTTTCAGGCTGGCAGGAGCCCCACTCCAACGGAAAGCTTCCTTCTTaGAGTCCACGACTACTACTC | + |
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Preference number: 4 (lower is better) Translates to: VQQKPRFSVSGWQEPHSNGKLPS*SPRLLL Trigger: GAGTAGTAGTCGTGGACTGCAAGAAGGAAGCTTTCC...GTTGGAGTGGGGCTCCTGCCAGCCTGAAACTGAAAACCTGGGTTTCTGCTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR GCA 90 bp | ATTGTGGCATCTGGGACTCGCTTTATTGGACACATAGCTGTCCACACTTTGCCGTGCTCAAGCCGGCTCTaGCGCTGTTTGAATGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: IVASGTRFIGHIAVHTLPCSSRL*RCLNAS Trigger: GGAGGCATTCAAACAGCGGCAGAGCCGGCTTGAGCA...CGGCAAAGTGTGGACAGCTATGTGTCCAATAAAGCGAGTCCCAGATGCCACAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR CCA 90 bp | GCTCCCCAGAGGCCAGACTTCTCTTTATTTCTACAGCACACAAGGAGTCCAGAGAGAGGGGCAAGCTGCTaGAACAAGGTCTCGATGCCT | + |
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Preference number: 4 (lower is better) Translates to: APQRPDFSLFLQHTRSPERGASC*NKVSMP Trigger: AGGCATCGAGACCTTGTTCCAGCAGCTTGCCCCTCT...CTCTGGACTCCTTGTGTGCTGTAGAAATAAAGAGAAGTCTGGCCTCTGGGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR TCA 90 bp | AGAGGGGCTTTTCTTTGCCAACTCATAGAGTATATGGGAAGACATGTGCAGCAGGGTTGGCAATTTCAGTaGCCTGCTCGGGAGTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: RGAFLCQLIEYMGRHVQQGWQFQ*PARECG Trigger: CCCGCACTCCCGAGCAGGTCACTGAAATTGCCAACC...CTGCTGCACATGTCTTCCCATATACTCTATGAGTTGGCAAAGAAAAGCCCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR TCA 90 bp | AGGCCAGACTTCTCTTTATTTCTACAGCACACAAGGAGTCCAGAGCCAGAGAAAGTCCGGCGCAACTGCTaGACCAGAATTGGATCGCTG | + |
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Preference number: 4 (lower is better) Translates to: RPDFSLFLQHTRSPEPEKVRRNC*TRIGSL Trigger: CAGCGATCCAATTCTGGTTCAGCAGTTGCGCCGGAC...TTTCTCTGGCTCTGGACTCCTTGTGTGCTGTAGAAATAAAGAGAAGTCTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS-3UTR CCA 90 bp | AGGCATTGTGGCATCTGGGACTCGCTTTATTGGACACATAGCTGTCCACACTTTGACTACTACTCGGGCTaGGTCCCGATTCAGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RHCGIWDSLYWTHSCPHFDYYSG*VPIQTG Trigger: TCCTGTCTGAATCGGGACCCAGCCCGAGTAGTAGTC...AAAGTGTGGACAGCTATGTGTCCAATAAAGCGAGTCCCAGATGCCACAATGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS-3UTR TCA 90 bp | ACCCAGGTTTTCAGTTTCAGGCTGGCAGGAGCCCCACTCCAACGAGGCACTCATTCTGTCTGTAATCTTTaGAGTATTTGTATGTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TQVFSFRLAGAPLQRGTHSVCNL*SICMSG Trigger: GCCGGACATACAAATACTTCAAAGATTACAGACAGA...ATGAGTGCCTCGTTGGAGTGGGGCTCCTGCCAGCCTGAAACTGAAAACCTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS-3UTR TCA 90 bp | AGGCCAGACTTCTCTTTATTTCTACAGCACACAAGGAGTCCAGAGCCAGAGAAAACAGACGGTAGGAGATaGAACCGTGAGGGTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RPDFSLFLQHTRSPEPEKTDGRR*NREGPH Trigger: GTGTGGACCCTCACGGTTTCATCTCCTACCGTCTGT...TTTCTCTGGCTCTGGACTCCTTGTGTGCTGTAGAAATAAAGAGAAGTCTGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS-3UTR TCA 90 bp | AGAGGCCAGACTTCTCTTTATTTCTACAGCACACAAGGAGTCCAGAGCCAGAGATCAGTGCAATGGTCTTaGGGAAGGCAGACAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGQTSLYFYSTQGVQSQRSVQWS*GRQTGP Trigger: TGGACCTGTCTGCCTTCCTCAAGACCATTGCACTGA...TCTCTGGCTCTGGACTCCTTGTGTGCTGTAGAAATAAAGAGAAGTCTGGCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS-3UTR TCA 90 bp | GCTTTTCTTTGCCAACTCATAGAGTATATGGGAAGACATGTGCAGCAGAAACCCGGCTCTGCCGCTGTTTaGATGCCTCCAGTGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AFLCQLIEYMGRHVQQKPGSAAV*MPPVGH Trigger: ATGACCCACTGGAGGCATTCAAACAGCGGCAGAGCC...GGGTTTCTGCTGCACATGTCTTCCCATATACTCTATGAGTTGGCAAAGAAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS-3UTR CCA 90 bp | CGAGGCGGCTCCCCAGAGGCCAGACTTCTCTTTATTTCTACAGCACACAAGGAGATTCATCAGGAATCTTaGTACCATTTTCATCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RGGSPEARLLFISTAHKEIHQES*YHFHPQ Trigger: CTGTGGATGAAAATGGTACCAAGATTCCTGATGAAT...CTCCTTGTGTGCTGTAGAAATAAAGAGAAGTCTGGCCTCTGGGGAGCCGCCTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS-3UTR CCA 90 bp | AGGCCAGACTTCTCTTTATTTCTACAGCACACAAGGAGTCCAGAGCCAGAGAAACAAGGTCTCGATGCCTaGACGCTTCTTAAACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPDFSLFLQHTRSPEPEKQGLDA*TLLKPP Trigger: TGGAGGTTTAAGAAGCGTCCAGGCATCGAGACCTTG...TTTCTCTGGCTCTGGACTCCTTGTGTGCTGTAGAAATAAAGAGAAGTCTGGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS-3UTR TCA 90 bp | AGGCATTGTGGCATCTGGGACTCGCTTTATTGGACACATAGCTGTCCACACTTTGAGATGTCCTTCACATaGTGTCCCTCCATATATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RHCGIWDSLYWTHSCPHFEMSFT*CPSIYL Trigger: CAGATATATGGAGGGACATCATGTGAAGGACATCTC...AAAGTGTGGACAGCTATGTGTCCAATAAAGCGAGTCCCAGATGCCACAATGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAGAGGGGCTTTTCTTTGCCAACTCATAGAGTATATGGGAAGACATGTGCTCCACTTGGTTCAGTaGAATGGTCTTGAGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RERGAFLCQLIEYMGRHVLHLVQ*NGLEEG Trigger: GCCTTCCTCAAGACCATTGCACTGAACCAAGTGGAG...CACATGTCTTCCCATATACTCTATGAGTTGGCAAAGAAAAGCCCCTCTCTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS-3UTR CAA 90 bp | CCCACTCCAACGAGGCACTCATGGCACCCAGCCCTGTGGTGGTGCTCAGTCACTGAGAGGCCCTGCCTGTaGGACTTGGAGAGCTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PTPTRHSWHPALWWCSVTERPCL*DLESSA Trigger: GGCCGAGCTCTCCAAGTCCAACAGGCAGGGCCTCTC...AGTGACTGAGCACCACCACAGGGCTGGGTGCCATGAGTGCCTCGTTGGAGTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS TCA 90 bp | CCCGGTCATCTGAGTTGCCATCCCAGGGCCGCAGGGCAACACCGTTaGAGGGCTGGAGGCGGAAAGCTTCCTTCTTGCAGTCCACGACTA | + |
|
Preference number: 5 (lower is better) Translates to: PGHLSCHPRAAGQHR*RAGGGKLPSCSPRL Trigger: TAGTCGTGGACTGCAAGAAGGAAGCTTTCCGCCTCCAGCCCTTCAACGGTGTTGCCCTGCGGCCCTGGGATGGCAACTCAGATGACCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS TCA 90 bp | CCAGGCGCTGCTGCTCCTCCTGCTCAAGCCGGCTCTGCCGCTGTTTaGATGCCTCCAGTGGGTCATCCTCTAGAGCATAGTGCTCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGAAAPPAQAGSAAV*MPPVGHPLEHSAPA Trigger: TGCTGGAGCACTATGCTCTAGAGGATGACCCACTGGAGGCATTCAAACAGCGGCAGAGCCGGCTTGAGCAGGAGGAGCAGCAGCGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS-3UTR CAA 90 bp | AGGAGTCCAGAGCCAGAGAAAGAGGGAGGGAGAGAGAGAGAGGGGCTTTTCTTTTGTGGCCCCTGGGCCTaGGAGCCCCCACGGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSPEPEKEGGREREGLFFCGPWA*EPPRLA Trigger: TGCCAACCGTGGGGGCTCCAAGGCCCAGGGGCCACA...AAAGAAAAGCCCCTCTCTCTCTCTCCCTCCCTCTTTCTCTGGCTCTGGACTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS TCA 90 bp | AATGGTCTTGAGGAAGGCAGACAGGTCCAGCAAGACCCGGTCATCTaGGTTGCCATCCCAGGGCCGCAGGGCAACACCGTTGAAGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NGLEEGRQVQQDPVI*VAIPGPQGNTVEGL Trigger: CAGCCCTTCAACGGTGTTGCCCTGCGGCCCTGGGATGGCAACTCAGATGACCGGGTCTTGCTGGACCTGTCTGCCTTCCTCAAGACCATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS CCA 90 bp | GCCTGGACGCTTCTTAAACCTCCAGCCAGTGGCCAGCGACCACTCTaGGTGCAGAAGGACCCCGGTAAGCTCCAGGACCAGTGTATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: AWTLLKPPASGQRPL*VQKDPGKLQDQCIR Trigger: CCTTATACACTGGTCCTGGAGCTTACCGGGGTCCTTCTGCACCCAGAGTGGTCGCTGGCCACTGGCTGGAGGTTTAAGAAGCGTCCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS CCA 90 bp | TCTGAGTTGCCATCCCAGGGCCGCAGGGCAACACCGTTGAAGGGCTaGAGGCGGAAAGCTTCCTTCTTGCAGTCCACGACTACTACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SELPSQGRRATPLKG*RRKASFLQSTTTTR Trigger: CCGAGTAGTAGTCGTGGACTGCAAGAAGGAAGCTTTCCGCCTCCAGCCCTTCAACGGTGTTGCCCTGCGGCCCTGGGATGGCAACTCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS CCA 90 bp | GACCAGTGTATAAGGTGGCTGGTAGTAGGGCTCCCGCAGAGGGTCTaGGAGAAGGCAGGGACTGGTGGGCTCGATGATCATCTGTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: DQCIRWLVVGLPQRV*EKAGTGGLDDHLSV Trigger: TACAGACAGATGATCATCGAGCCCACCAGTCCCTGCCTTCTCCCAGACCCTCTGCGGGAGCCCTACTACCAGCCACCTTATACACTGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS CCA 90 bp | TATTTCATACAGAGGGGCAAGCTGCTGGAACAAGGTCTCGATGCCTaGACGCTTCTTAAACCTCCAGCCAGTGGCCAGCGACCACTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: YFIQRGKLLEQGLDA*TLLKPPASGQRPLW Trigger: CCAGAGTGGTCGCTGGCCACTGGCTGGAGGTTTAAGAAGCGTCCAGGCATCGAGACCTTGTTCCAGCAGCTTGCCCCTCTGTATGAAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS CCA 90 bp | GAGGCGGAAAGCTTCCTTCTTGCAGTCCACGACTACTACTCGGGCTaGGTCCCGATTCAGACAGGAGATGTCCTTCACATGATGTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: EAESFLLAVHDYYSG*VPIQTGDVLHMMSL Trigger: GAGGGACATCATGTGAAGGACATCTCCTGTCTGAATCGGGACCCAGCCCGAGTAGTAGTCGTGGACTGCAAGAAGGAAGCTTTCCGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS-3UTR CAA 90 bp | GTGCAGCAGAAACCCAGGTTTTCAGTTTCAGGCTGGCAGGAGCCCCACTCCAACTTCAGTGCAATGGTCTaGAGGAAGGCAGACAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VQQKPRFSVSGWQEPHSNFSAMV*RKADRS Trigger: GGACCTGTCTGCCTTCCTCAAGACCATTGCACTGAA...GTTGGAGTGGGGCTCCTGCCAGCCTGAAACTGAAAACCTGGGTTTCTGCTGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS-3UTR CAA 90 bp | AGAGGGGCTTTTCTTTGCCAACTCATAGAGTATATGGGAAGACATGTGCAGCAGCCCTGCCTGTTGGACTaGGAGAGCTCGGCCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RGAFLCQLIEYMGRHVQQPCLLD*ESSARR Trigger: GCGCCTGGCCGAGCTCTCCAAGTCCAACAGGCAGGG...CTGCTGCACATGTCTTCCCATATACTCTATGAGTTGGCAAAGAAAAGCCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS-3UTR CAA 90 bp | AGAGGGGCTTTTCTTTGCCAACTCATAGAGTATATGGGAAGACATGTGCAGCAGACCCGGTCATCTGAGTaGCCATCCCAGGGCCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGAFLCQLIEYMGRHVQQTRSSE*PSQGRR Trigger: CCTGCGGCCCTGGGATGGCAACTCAGATGACCGGGT...CTGCTGCACATGTCTTCCCATATACTCTATGAGTTGGCAAAGAAAAGCCCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS-3UTR CAA 90 bp | AGAGGGGCTTTTCTTTGCCAACTCATAGAGTATATGGGAAGACATGTGCAGCAGCGCAGGGCAACACCGTaGAAGGGCTGGAGGCGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RGAFLCQLIEYMGRHVQQRRATP*KGWRRK Trigger: TTTCCGCCTCCAGCCCTTCAACGGTGTTGCCCTGCG...CTGCTGCACATGTCTTCCCATATACTCTATGAGTTGGCAAAGAAAAGCCCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS GCA 90 bp | CCAGTCTCTGATGTGAAGATGACTATTTCATACAGAGGGGCAAGCTaGTGGAACAAGGTCTCGATGCCTGGACGCTTCTTAAACCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PVSDVKMTISYRGAS*WNKVSMPGRFLNLQ Trigger: CTGGAGGTTTAAGAAGCGTCCAGGCATCGAGACCTTGTTCCAGCAGCTTGCCCCTCTGTATGAAATAGTCATCTTCACATCAGAGACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS CCA 90 bp | GTCTCTGATGTGAAGATGACTATTTCATACAGAGGGGCAAGCTGCTaGAACAAGGTCTCGATGCCTGGACGCTTCTTAAACCTCCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VSDVKMTISYRGASC*NKVSMPGRFLNLQP Trigger: TGGCTGGAGGTTTAAGAAGCGTCCAGGCATCGAGACCTTGTTCCAGCAGCTTGCCCCTCTGTATGAAATAGTCATCTTCACATCAGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS-3UTR CAA 90 bp | TGTGGCATCTGGGACTCGCTTTATTGGACACATAGCTGTCCACACTTTGCCGTGAATTCATCAGGAATCTaGGTACCATTTTCATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: CGIWDSLYWTHSCPHFAVNSSGI*VPFSST Trigger: TGTGGATGAAAATGGTACCAAGATTCCTGATGAATT...CACGGCAAAGTGTGGACAGCTATGTGTCCAATAAAGCGAGTCCCAGATGCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS CCA 90 bp | ATCTTTGAAGTATTTGTATGTCCGGCGCAACTGCTGAACCAGAATTaGATCGCTGTCGAATTCATCAGGAATCTTGGTACCATTTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: IFEVFVCPAQLLNQN*IAVEFIRNLGTIFI Trigger: GATGAAAATGGTACCAAGATTCCTGATGAATTCGACAGCGATCCAATTCTGGTTCAGCAGTTGCGCCGGACATACAAATACTTCAAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS CCA 90 bp | ACTGCTGAACCAGAATTGGATCGCTGTCGAATTCATCAGGAATCTTaGTACCATTTTCATCCACAGGGTTGTTTCCAAAAATATAGACGA | + |
|
Preference number: 5 (lower is better) Translates to: TAEPELDRCRIHQES*YHFHPQGCFQKYRR Trigger: TCGTCTATATTTTTGGAAACAACCCTGTGGATGAAAATGGTACCAAGATTCCTGATGAATTCGACAGCGATCCAATTCTGGTTCAGCAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS CAA 72 bp | CGGCTGGCGAGTGAGCCAAAGGAGAGGCCCTGCCTGTaGGACTTGGAGAGCTCGGCCAGGCGCTGCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RLASEPKERPCL*DLESSARRCCS Trigger: GGAGCAGCAGCGCCTGGCCGAGCTCTCCAAGTCCAACAGGCAGGGCCTCTCCTTTGGCTCACTCGCCAGCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS GCA 72 bp | CACAGTCGGCTGGCGAGTGAGCCAAAGGAGAGGCCCTaGCTGTTGGACTTGGAGAGCTCGGCCAGGCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HSRLASEPKERP*LLDLESSARRC Trigger: GCAGCGCCTGGCCGAGCTCTCCAAGTCCAACAGGCAGGGCCTCTCCTTTGGCTCACTCGCCAGCCGACTGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS TCA 72 bp | GGGCTGCTTGGAGCGAGGCCACAGTCGGCTGGCGAGTaGGCCAAAGGAGAGGCCCTGCCTGTTGGACTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GLLGARPQSAGE*AKGEALPVGLG Trigger: TCCAAGTCCAACAGGCAGGGCCTCTCCTTTGGCTCACTCGCCAGCCGACTGTGGCCTCGCTCCAAGCAGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS CAA 90 bp | GTCTTGAGGAAGGCAGACAGGTCCAGCAAGACCCGGTCATCTGAGTaGCCATCCCAGGGCCGCAGGGCAACACCGTTGAAGGGCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VLRKADRSSKTRSSE*PSQGRRATPLKGWR Trigger: CCTCCAGCCCTTCAACGGTGTTGCCCTGCGGCCCTGGGATGGCAACTCAGATGACCGGGTCTTGCTGGACCTGTCTGCCTTCCTCAAGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS TCA 72 bp | GAGGAAGGCAGACAGGTCCAGCAAGACCCGGTCATCTaGGTTGCCATCCCAGGGCCGCAGGGCAACACCGTT | + |
|
Preference number: 6 (lower is better) Translates to: EEGRQVQQDPVI*VAIPGPQGNTV Trigger: AACGGTGTTGCCCTGCGGCCCTGGGATGGCAACTCAGATGACCGGGTCTTGCTGGACCTGTCTGCCTTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS CCA 72 bp | CCATCCCAGGGCCGCAGGGCAACACCGTTGAAGGGCTaGAGGCGGAAAGCTTCCTTCTTGCAGTCCACGACT | + |
|
Preference number: 6 (lower is better) Translates to: PSQGRRATPLKG*RRKASFLQSTT Trigger: AGTCGTGGACTGCAAGAAGGAAGCTTTCCGCCTCCAGCCCTTCAACGGTGTTGCCCTGCGGCCCTGGGATGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS CAA 90 bp | ACCCGGTCATCTGAGTTGCCATCCCAGGGCCGCAGGGCAACACCGTaGAAGGGCTGGAGGCGGAAAGCTTCCTTCTTGCAGTCCACGACT | + |
|
Preference number: 6 (lower is better) Translates to: TRSSELPSQGRRATP*KGWRRKASFLQSTT Trigger: AGTCGTGGACTGCAAGAAGGAAGCTTTCCGCCTCCAGCCCTTCAACGGTGTTGCCCTGCGGCCCTGGGATGGCAACTCAGATGACCGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS TCA 72 bp | CTGAGTTGCCATCCCAGGGCCGCAGGGCAACACCGTTaGAGGGCTGGAGGCGGAAAGCTTCCTTCTTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LSCHPRAAGQHR*RAGGGKLPSCS Trigger: ACTGCAAGAAGGAAGCTTTCCGCCTCCAGCCCTTCAACGGTGTTGCCCTGCGGCCCTGGGATGGCAACTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS CCA 72 bp | AAGGACCCCGGTAAGCTCCAGGACCAGTGTATAAGGTaGCTGGTAGTAGGGCTCCCGCAGAGGGTCTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: KDPGKLQDQCIR*LVVGLPQRVWE Trigger: CTCCCAGACCCTCTGCGGGAGCCCTACTACCAGCCACCTTATACACTGGTCCTGGAGCTTACCGGGGTCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS CAA 72 bp | TCTGAGTTGCCATCCCAGGGCCGCAGGGCAACACCGTaGAAGGGCTGGAGGCGGAAAGCTTCCTTCTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SELPSQGRRATP*KGWRRKASFLQ Trigger: CTGCAAGAAGGAAGCTTTCCGCCTCCAGCCCTTCAACGGTGTTGCCCTGCGGCCCTGGGATGGCAACTCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS CAA 72 bp | AAGGCAGACAGGTCCAGCAAGACCCGGTCATCTGAGTaGCCATCCCAGGGCCGCAGGGCAACACCGTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KADRSSKTRSSE*PSQGRRATPLK Trigger: CTTCAACGGTGTTGCCCTGCGGCCCTGGGATGGCAACTCAGATGACCGGGTCTTGCTGGACCTGTCTGCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS CAA 90 bp | CGCAGGGCAACACCGTTGAAGGGCTGGAGGCGGAAAGCTTCCTTCTaGCAGTCCACGACTACTACTCGGGCTGGGTCCCGATTCAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: RRATPLKGWRRKASF*QSTTTTRAGSRFRQ Trigger: CTGTCTGAATCGGGACCCAGCCCGAGTAGTAGTCGTGGACTGCAAGAAGGAAGCTTTCCGCCTCCAGCCCTTCAACGGTGTTGCCCTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS CCA 72 bp | CAGAGGGGCAAGCTGCTGGAACAAGGTCTCGATGCCTaGACGCTTCTTAAACCTCCAGCCAGTGGCCAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: QRGKLLEQGLDA*TLLKPPASGQR Trigger: TCGCTGGCCACTGGCTGGAGGTTTAAGAAGCGTCCAGGCATCGAGACCTTGTTCCAGCAGCTTGCCCCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS CAA 72 bp | ACACCGTTGAAGGGCTGGAGGCGGAAAGCTTCCTTCTaGCAGTCCACGACTACTACTCGGGCTGGGTCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: TPLKGWRRKASF*QSTTTTRAGSR Trigger: TCGGGACCCAGCCCGAGTAGTAGTCGTGGACTGCAAGAAGGAAGCTTTCCGCCTCCAGCCCTTCAACGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS CAA 72 bp | AGCATAGTGCTCCAGCACCGTCCGGACGTCCTCCACTaGGTTCAGTGCAATGGTCTTGAGGAAGGCAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: SIVLQHRPDVLH*VQCNGLEEGRQ Trigger: CTGTCTGCCTTCCTCAAGACCATTGCACTGAACCAAGTGGAGGACGTCCGGACGGTGCTGGAGCACTATGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS CCA 72 bp | AGCTTCCTTCTTGCAGTCCACGACTACTACTCGGGCTaGGTCCCGATTCAGACAGGAGATGTCCTTCACATG | + |
|
Preference number: 6 (lower is better) Translates to: SFLLAVHDYYSG*VPIQTGDVLHM Trigger: CATGTGAAGGACATCTCCTGTCTGAATCGGGACCCAGCCCGAGTAGTAGTCGTGGACTGCAAGAAGGAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS TCA 72 bp | CATCCACAGGGTTGTTTCCAAAAATATAGACGATGCTaGCAGTCCCACCAGCTCCGAGCAAACCGGCGATCC | + |
|
Preference number: 6 (lower is better) Translates to: HPQGCFQKYRRC*QSHQLRANRRS Trigger: GGATCGCCGGTTTGCTCGGAGCTGGTGGGACTGTCAGCATCGTCTATATTTTTGGAAACAACCCTGTGGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS GCA 72 bp | GATGTGAAGATGACTATTTCATACAGAGGGGCAAGCTaGTGGAACAAGGTCTCGATGCCTGGACGCTTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: DVKMTISYRGAS*WNKVSMPGRFL Trigger: TAAGAAGCGTCCAGGCATCGAGACCTTGTTCCAGCAGCTTGCCCCTCTGTATGAAATAGTCATCTTCACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS CCA 72 bp | GTGAAGATGACTATTTCATACAGAGGGGCAAGCTGCTaGAACAAGGTCTCGATGCCTGGACGCTTCTTAAAC | + |
|
Preference number: 6 (lower is better) Translates to: VKMTISYRGASC*NKVSMPGRFLN Trigger: GTTTAAGAAGCGTCCAGGCATCGAGACCTTGTTCCAGCAGCTTGCCCCTCTGTATGAAATAGTCATCTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
||
| CDS CCA 72 bp | GTATTTGTATGTCCGGCGCAACTGCTGAACCAGAATTaGATCGCTGTCGAATTCATCAGGAATCTTGGTACC | + |
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Preference number: 6 (lower is better) Translates to: VFVCPAQLLNQN*IAVEFIRNLGT Trigger: GGTACCAAGATTCCTGATGAATTCGACAGCGATCCAATTCTGGTTCAGCAGTTGCGCCGGACATACAAATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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| CDS CAA 72 bp | AGTATTTGTATGTCCGGCGCAACTGCTGAACCAGAATaGGATCGCTGTCGAATTCATCAGGAATCTTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: SICMSGATAEPE*DRCRIHQESWY Trigger: GTACCAAGATTCCTGATGAATTCGACAGCGATCCAATTCTGGTTCAGCAGTTGCGCCGGACATACAAATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081946.5 |
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