Pregenerated sensors for TIMM44 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002949Ensembl transcript IDs: ENSMUST00000003029.14
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | AAGCTCTTCCCTTGTCCAGCTGGTTTCACAGCTGCCCTGAAGAACTaGGGGCAGAAGCTTGTTCACAGCTGTATCAGATGTGGCAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: KLFPCPAGFTAALKN*GQKLVHSCIRCGKV Trigger: CACTTTGCCACATCTGATACAGCTGTGAACAAGCTTCTGCCCCAAGTTCTTCAGGGCAGCTGTGAAACCAGCTGGACAAGGGAAGAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| 3UTR-3UTR CCA 90 bp | CTTCCCTTGTCCAGCTGGTTTCACAGCTGCCCTGAAGAACTTGGGGCAGAAGCTCAGCTGTATCAGATGTaGCAAAGTGTCTCTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: LPLSSWFHSCPEELGAEAQLYQM*QSVSVC Trigger: ACACACAGAGACACTTTGCCACATCTGATACAGCTG...AGCTTCTGCCCCAAGTTCTTCAGGGCAGCTGTGAAACCAGCTGGACAAGGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| 3UTR CCA 72 bp | CAGCAGGCCAGGCCTCACCCGACAGGAGTCCTGGGCTaGGGCCTTCTGACACTGCCAGCAACCCCTGTGACG | + |
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Preference number: 3 (lower is better) Translates to: QQARPHPTGVLG*GLLTLPATPVT Trigger: CGTCACAGGGGTTGCTGGCAGTGTCAGAAGGCCCCAGCCCAGGACTCCTGTCGGGTGAGGCCTGGCCTGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| 3UTR-3UTR CAA 90 bp | CCCGACAGGAGTCCTGGGCTGGGGCCTTCTGACACTGCCAGCAACCCCTGTGACCCCCAAGCTCTTCCCTaGTCCAGCTGGTTTCACAGC | + |
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Preference number: 3 (lower is better) Translates to: PDRSPGLGPSDTASNPCDPQALP*SSWFHS Trigger: GCTGTGAAACCAGCTGGACAAGGGAAGAGCTTGGGG...GTCACAGGGGTTGCTGGCAGTGTCAGAAGGCCCCAGCCCAGGACTCCTGTCGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| 3UTR-3UTR CAA 90 bp | GGACCTAAAGTGGCTTGGAAGGCAATGCCAGTGGACTACTTAGAACAGCAGGCCGCTGCCCTGAAGAACTaGGGGCAGAAGCTTGTTCAC | + |
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Preference number: 3 (lower is better) Translates to: GPKVAWKAMPVDYLEQQAAALKN*GQKLVH Trigger: GTGAACAAGCTTCTGCCCCAAGTTCTTCAGGGCAGC...GGCCTGCTGTTCTAAGTAGTCCACTGGCATTGCCTTCCAAGCCACTTTAGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| 3UTR TCA 72 bp | TCAGATGTGGCAAAGTGTCTCTGTGTGTCTGTCCCATaGTGGTCTAGCCTCGAGCTGCCTAGACTCCATTGC | + |
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Preference number: 3 (lower is better) Translates to: SDVAKCLCVSVP*WSSLELPRLHC Trigger: GCAATGGAGTCTAGGCAGCTCGAGGCTAGACCATCATGGGACAGACACACAGAGACACTTTGCCACATCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| 3UTR TCA 72 bp | AGCTCTTCCCTTGTCCAGCTGGTTTCACAGCTGCCCTaGAGAACTTGGGGCAGAAGCTTGTTCACAGCTGTA | + |
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Preference number: 3 (lower is better) Translates to: SSSLVQLVSQLP*RTWGRSLFTAV Trigger: TACAGCTGTGAACAAGCTTCTGCCCCAAGTTCTTCAGGGCAGCTGTGAAACCAGCTGGACAAGGGAAGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR TCA 90 bp | GACAGGAGTCCTGGGCTGGGGCCTTCTGACACTGCCAGCAACCCCTGTGACGGACTCTGTGCTGGAGGCTaGGATGTCCAGAAGGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: DRSPGLGPSDTASNPCDGLCAGG*DVQKAP Trigger: TGGCGCCTTCTGGACATCTCAGCCTCCAGCACAGAG...TCCGTCACAGGGGTTGCTGGCAGTGTCAGAAGGCCCCAGCCCAGGACTCCTGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR GCA 90 bp | GTGTGTCTGTCCCATGATGGTCTAGCCTCGAGCTGCCTAGACTCCATTGCTGCCCCCAGAGCCTTGGCCTaGTGGATAGGGTGGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VCLSHDGLASSCLDSIAAPRALA*WIGWAS Trigger: GCTGGCCCACCCTATCCAGCAGGCCAAGGCTCTGGG...GGCAGCAATGGAGTCTAGGCAGCTCGAGGCTAGACCATCATGGGACAGACACAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CCA 90 bp | CCGACAGGAGTCCTGGGCTGGGGCCTTCTGACACTGCCAGCAACCCCTGTGACGTGGCTGGAGAGAAATTaGATTCCGCTGCCTAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: PTGVLGWGLLTLPATPVTWLERN*IPLPRH Trigger: GTGCCTAGGCAGCGGAATCCAATTTCTCTCCAGCCA...CGTCACAGGGGTTGCTGGCAGTGTCAGAAGGCCCCAGCCCAGGACTCCTGTCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CCA 90 bp | CCGACAGGAGTCCTGGGCTGGGGCCTTCTGACACTGCCAGCAACCCCTGTGACGGGGGTAGGTTGTGGCTaGAGAGAAATTGGATTCCGC | + |
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Preference number: 4 (lower is better) Translates to: PTGVLGWGLLTLPATPVTGVGCG*REIGFR Trigger: GCGGAATCCAATTTCTCTCCAGCCACAACCTACCCC...CGTCACAGGGGTTGCTGGCAGTGTCAGAAGGCCCCAGCCCAGGACTCCTGTCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CCA 90 bp | CCCGACAGGAGTCCTGGGCTGGGGCCTTCTGACACTGCCAGCAACCCCTGTGACGGTAACGATCAGCACTaGGCCCTGCTCCATCATCTT | + |
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Preference number: 4 (lower is better) Translates to: PDRSPGLGPSDTASNPCDGNDQH*ALLHHL Trigger: AAGATGATGGAGCAGGGCCCAGTGCTGATCGTTACC...GTCACAGGGGTTGCTGGCAGTGTCAGAAGGCCCCAGCCCAGGACTCCTGTCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR TCA 90 bp | GAAGGCAATGCCAGTGGACTACTTAGAACAGCAGGCCAGGCCTCACCCGACAGGCCTGGGAGATGGCTTTaGAGGCTGCCGTCTTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: EGNASGLLRTAGQASPDRPGRWL*RLPSCP Trigger: TGGGCAAGACGGCAGCCTTCAAAGCCATCTCCCAGG...CCTGTCGGGTGAGGCCTGGCCTGCTGTTCTAAGTAGTCCACTGGCATTGCCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CCA 90 bp | CCGACAGGAGTCCTGGGCTGGGGCCTTCTGACACTGCCAGCAACCCCTGTGACGCCATGGGGTAGGTTGTaGCTGGAGAGAAATTGGATT | + |
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Preference number: 4 (lower is better) Translates to: PTGVLGWGLLTLPATPVTPWGRL*LERNWI Trigger: AATCCAATTTCTCTCCAGCCACAACCTACCCCATGG...CGTCACAGGGGTTGCTGGCAGTGTCAGAAGGCCCCAGCCCAGGACTCCTGTCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR GCA 90 bp | GAAGGCAATGCCAGTGGACTACTTAGAACAGCAGGCCAGGCCTCACCCGACAGGGATGGCTTTGAAGGCTaGCGTCTTGCCCAGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: EGNASGLLRTAGQASPDRDGFEG*RLAQLL Trigger: GAGAAGCTGGGCAAGACGGCAGCCTTCAAAGCCATC...CCTGTCGGGTGAGGCCTGGCCTGCTGTTCTAAGTAGTCCACTGGCATTGCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR GCA 90 bp | ACGCACTGGGAGACAGTCCCCATCCTGCTAGACACCCCAAGCTCTTCCCTTGTCATCAGCACTGGGCCCTaGTCCATCATCTTGCCCATG | + |
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Preference number: 4 (lower is better) Translates to: THWETVPILLDTPSSSLVISTGP*SIILPM Trigger: CATGGGCAAGATGATGGAGCAGGGCCCAGTGCTGAT...GACAAGGGAAGAGCTTGGGGTGTCTAGCAGGATGGGGACTGTCTCCCAGTGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CCA 90 bp | CCGACAGGAGTCCTGGGCTGGGGCCTTCTGACACTGCCAGCAACCCCTGTGACGATTTATACTTCCTTCTaGCTTCCTGGAGAGCATCCG | + |
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Preference number: 4 (lower is better) Translates to: PTGVLGWGLLTLPATPVTIYTSF*LPGEHP Trigger: CGGATGCTCTCCAGGAAGCCAGAAGGAAGTATAAAT...CGTCACAGGGGTTGCTGGCAGTGTCAGAAGGCCCCAGCCCAGGACTCCTGTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CCA 90 bp | CCTTGTCCAGCTGGTTTCACAGCTGCCCTGAAGAACTTGGGGCAGAAGCTTGTTAGAGCCTTGGCCTGCTaGATAGGGTGGGCCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PCPAGFTAALKNLGQKLVRALAC*IGWASW Trigger: CCAGCTGGCCCACCCTATCCAGCAGGCCAAGGCTCT...AACAAGCTTCTGCCCCAAGTTCTTCAGGGCAGCTGTGAAACCAGCTGGACAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CCA 90 bp | CCGACAGGAGTCCTGGGCTGGGGCCTTCTGACACTGCCAGCAACCCCTGTGACGACTCTTCTAGCTTCTTaGCCTCATCTCGGAACTTTT | + |
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Preference number: 4 (lower is better) Translates to: PTGVLGWGLLTLPATPVTTLLAS*PHLGTF Trigger: AAAAGTTCCGAGATGAGGCCAAGAAGCTAGAAGAGT...CGTCACAGGGGTTGCTGGCAGTGTCAGAAGGCCCCAGCCCAGGACTCCTGTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR TCA 90 bp | CCTTGTCCAGCTGGTTTCACAGCTGCCCTGAAGAACTTGGGGCAGAAGCTTGTTAGGCAGCATAAGGGTTaGGCTCCTCCTGGTCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: PCPAGFTAALKNLGQKLVRQHKG*APPGLC Trigger: GCAGAGACCAGGAGGAGCTCAACCCTTATGCTGCCT...AACAAGCTTCTGCCCCAAGTTCTTCAGGGCAGCTGTGAAACCAGCTGGACAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CCA 90 bp | ACGCACTGGGAGACAGTCCCCATCCTGCTAGACACCCCAAGCTCTTCCCTTGTCGTCCTTGTCAAAGGTTaGGTCCACTCTCAGGATCTC | + |
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Preference number: 4 (lower is better) Translates to: THWETVPILLDTPSSSLVVLVKG*VHSQDL Trigger: GAGATCCTGAGAGTGGACCCAACCTTTGACAAGGAC...GACAAGGGAAGAGCTTGGGGTGTCTAGCAGGATGGGGACTGTCTCCCAGTGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR TCA 90 bp | CCCTTGTCCAGCTGGTTTCACAGCTGCCCTGAAGAACTTGGGGCAGAAGCTTGTCATAGCACCAGTCTTTaGGAATGTCAAGCTCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: PLSSWFHSCPEELGAEACHSTSL*ECQAPR Trigger: CCGGGGAGCTTGACATTCTCAAAGACTGGTGCTATG...ACAAGCTTCTGCCCCAAGTTCTTCAGGGCAGCTGTGAAACCAGCTGGACAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR TCA 90 bp | GGACCTAAAGTGGCTTGGAAGGCAATGCCAGTGGACTACTTAGAACAGCAGGCCCGCCTTTGGAGTTCTTaGTCACCATCACCACCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GPKVAWKAMPVDYLEQQARLWSS*SPSPPG Trigger: CCCAGGTGGTGATGGTGATCAAGAACTCCAAAGGCG...GGCCTGCTGTTCTAAGTAGTCCACTGGCATTGCCTTCCAAGCCACTTTAGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR GCA 90 bp | GGACCTAAAGTGGCTTGGAAGGCAATGCCAGTGGACTACTTAGAACAGCAGGCCCTGGTCTCTGCAGAGTaGCCACACGTACAGCATTCG | + |
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Preference number: 4 (lower is better) Translates to: GPKVAWKAMPVDYLEQQALVSAE*PHVQHS Trigger: CGAATGCTGTACGTGTGGGCACTCTGCAGAGACCAG...GGCCTGCTGTTCTAAGTAGTCCACTGGCATTGCCTTCCAAGCCACTTTAGGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CCA 90 bp | GACAGGAGTCCTGGGCTGGGGCCTTCTGACACTGCCAGCAACCCCTGTGACGGACAGAAGAATAAGATTTaGTCAGTGTCAGCTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: DRSPGLGPSDTASNPCDGQKNKI*SVSALF Trigger: GAAGAGAGCTGACACTGACCAAATCTTATTCTTCTG...TCCGTCACAGGGGTTGCTGGCAGTGTCAGAAGGCCCCAGCCCAGGACTCCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CCA 90 bp | GAAGCTTGTTCACAGCTGTATCAGATGTGGCAAAGTGTCTCTGTGTGTCTGTCCACTCCGCTGACTGCTTaGCTGTCCTGGCGGCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: EACSQLYQMWQSVSVCLSTPLTA*LSWRPL Trigger: AAGAGGCCGCCAGGACAGCCAAGCAGTCAGCGGAGT...GGACAGACACACAGAGACACTTTGCCACATCTGATACAGCTGTGAACAAGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CCA 90 bp | CTTCCCTTGTCCAGCTGGTTTCACAGCTGCCCTGAAGAACTTGGGGCAGAAGCTAAGTCCTTCCACTGCTaGTACCACTTGGAGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: LPLSSWFHSCPEELGAEAKSFHC*YHLESL Trigger: CAAGGACTCCAAGTGGTACCAGCAGTGGAAGGACTT...AGCTTCTGCCCCAAGTTCTTCAGGGCAGCTGTGAAACCAGCTGGACAAGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CCA 90 bp | CCTTGTCCAGCTGGTTTCACAGCTGCCCTGAAGAACTTGGGGCAGAAGCTTGTTGGATCTGCTCTGTGCTaGAGGCTGAGATGTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: PCPAGFTAALKNLGQKLVGSALC*RLRCPE Trigger: TTCTGGACATCTCAGCCTCCAGCACAGAGCAGATCC...AACAAGCTTCTGCCCCAAGTTCTTCAGGGCAGCTGTGAAACCAGCTGGACAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR GCA 90 bp | CAAAGTGTCTCTGTGTGTCTGTCCCATGATGGTCTAGCCTCGAGCTGCCTAGACTTGAAGTCCTTCCACTaGTGGTACCACTTGGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: QSVSVCLSHDGLASSCLDLKSFH*WYHLES Trigger: GGACTCCAAGTGGTACCAGCAGTGGAAGGACTTCAA...GTCTAGGCAGCTCGAGGCTAGACCATCATGGGACAGACACACAGAGACACTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CCA 90 bp | GAAGCTTGTTCACAGCTGTATCAGATGTGGCAAAGTGTCTCTGTGTGTCTGTCCATTCGGGAGTGGAACTaGAAGCCCAGAGCCTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: EACSQLYQMWQSVSVCLSIREWN*KPRALA Trigger: GGCCAAGGCTCTGGGCTTCCAGTTCCACTCCCGAAT...GGACAGACACACAGAGACACTTTGCCACATCTGATACAGCTGTGAACAAGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CCA 90 bp | GCTCTTCTGCGCTTTGGTGTTTTATTAGGTCCAGATCTTAGGCTTATGTACAGGGGGTTGAGCTCCTCCTaGTCTCTGCAGAGTGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: ALLRFGVLLGPDLRLMYRGLSSS*SLQSAH Trigger: GTGGGCACTCTGCAGAGACCAGGAGGAGCTCAACCC...CCTGTACATAAGCCTAAGATCTGGACCTAATAAAACACCAAAGCGCAGAAGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR TCA 90 bp | GTGTGTCTGTCCCATGATGGTCTAGCCTCGAGCTGCCTAGACTCCATTGCTGCCTGGCTAATTCTTGTTTaGTGTTATCTAGCAAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: VCLSHDGLASSCLDSIAAWLILV*CYLASL Trigger: CAGGCTTGCTAGATAACATCAAACAAGAATTAGCCA...GGCAGCAATGGAGTCTAGGCAGCTCGAGGCTAGACCATCATGGGACAGACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR TCA 90 bp | GCTCTTCTGCGCTTTGGTGTTTTATTAGGTCCAGATCTTAGGCTTATGTACAGGCTTCTACCCCCTCCTTaGTCTTCCGGCCAAGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: ALLRFGVLLGPDLRLMYRLLPPP*SSGQGH Trigger: GTGACCTTGGCCGGAAGATCAAGGAGGGGGTAGAAG...CCTGTACATAAGCCTAAGATCTGGACCTAATAAAACACCAAAGCGCAGAAGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR GCA 90 bp | GCTCTTCTGCGCTTTGGTGTTTTATTAGGTCCAGATCTTAGGCTTATGTACAGGGCTCCTCCTGGTCTCTaGAGAGTGCCCACACGTACA | + |
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Preference number: 4 (lower is better) Translates to: ALLRFGVLLGPDLRLMYRAPPGL*RVPTRT Trigger: TGTACGTGTGGGCACTCTGCAGAGACCAGGAGGAGC...CCTGTACATAAGCCTAAGATCTGGACCTAATAAAACACCAAAGCGCAGAAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR TCA 90 bp | GTGTGTCTGTCCCATGATGGTCTAGCCTCGAGCTGCCTAGACTCCATTGCTGCCACACTTTGCTTTCTTTaGATTTTGCTCCAGCAAACT | + |
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Preference number: 4 (lower is better) Translates to: VCLSHDGLASSCLDSIAATLCFL*ILLQQT Trigger: AGTTTGCTGGAGCAAAATTCAAAGAAAGCAAAGTGT...GGCAGCAATGGAGTCTAGGCAGCTCGAGGCTAGACCATCATGGGACAGACACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CCA 90 bp | GCTCTTCTGCGCTTTGGTGTTTTATTAGGTCCAGATCTTAGGCTTATGTACAGGTCCAGAATTCGGGAGTaGAACTGGAAGCCCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: ALLRFGVLLGPDLRLMYRSRIRE*NWKPRA Trigger: GGCTCTGGGCTTCCAGTTCCACTCCCGAATTCTGGA...CCTGTACATAAGCCTAAGATCTGGACCTAATAAAACACCAAAGCGCAGAAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR TCA 90 bp | GAAGCTTGTTCACAGCTGTATCAGATGTGGCAAAGTGTCTCTGTGTGTCTGTCCCAACGTTGTTATCTTTaGAGTCCTTCCACTGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: EACSQLYQMWQSVSVCLSQRCYL*SPSTAG Trigger: ACCAGCAGTGGAAGGACTTCAAAGATAACAACGTTG...GGACAGACACACAGAGACACTTTGCCACATCTGATACAGCTGTGAACAAGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS GCA 90 bp | GTCTTGCCCAGCTTCTCCCCGCTCTTGGACACTGACTCCGCTGACTaGTTGGCTGTCCTGGCGGCCTCTTCTACCCCCTCCTTGATCTTC | + |
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Preference number: 5 (lower is better) Translates to: VLPSFSPLLDTDSAD*LAVLAASSTPSLIF Trigger: GAAGATCAAGGAGGGGGTAGAAGAGGCCGCCAGGACAGCCAAGCAGTCAGCGGAGTCAGTGTCCAAGAGCGGGGAGAAGCTGGGCAAGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS GCA 90 bp | GCGCCAGGCAGCATAAGGGTTGAGCTCCTCCTGGTCTCTGCAGAGTaGCCACACGTACAGCATTCGCTGCACCTTGTCCGGGTCACCATC | + |
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Preference number: 5 (lower is better) Translates to: APGSIRVELLLVSAE*PHVQHSLHLVRVTI Trigger: GATGGTGACCCGGACAAGGTGCAGCGAATGCTGTACGTGTGGGCACTCTGCAGAGACCAGGAGGAGCTCAACCCTTATGCTGCCTGGCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CAA 90 bp | CCGACAGGAGTCCTGGGCTGGGGCCTTCTGACACTGCCAGCAACCCCTGTGACGGGTCCTTGTCAAAGGTaGGGTCCACTCTCAGGATCT | + |
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Preference number: 5 (lower is better) Translates to: PTGVLGWGLLTLPATPVTGPCQR*GPLSGS Trigger: AGATCCTGAGAGTGGACCCAACCTTTGACAAGGACC...CGTCACAGGGGTTGCTGGCAGTGTCAGAAGGCCCCAGCCCAGGACTCCTGTCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS TCA 90 bp | TGCTGGAGGCTGAGATGTCCAGAAGGCGCCAGGCAGCATAAGGGTTaGGCTCCTCCTGGTCTCTGCAGAGTGCCCACACGTACAGCATTC | + |
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Preference number: 5 (lower is better) Translates to: CWRLRCPEGARQHKG*APPGLCRVPTRTAF Trigger: GAATGCTGTACGTGTGGGCACTCTGCAGAGACCAGGAGGAGCTCAACCCTTATGCTGCCTGGCGCCTTCTGGACATCTCAGCCTCCAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CCA 90 bp | CTGGCCGGCTTATCTGGTAGCTTGAACCATGGGGTAGGTTGTGGCTaGAGAGAAATTGGATTCCGCTGCCTAGGCACCTCCGCGGACAGC | + |
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Preference number: 5 (lower is better) Translates to: LAGLSGSLNHGVGCG*REIGFRCLGTSADS Trigger: GCTGTCCGCGGAGGTGCCTAGGCAGCGGAATCCAATTTCTCTCCAGCCACAACCTACCCCATGGTTCAAGCTACCAGATAAGCCGGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CAA 90 bp | GACAGGAGTCCTGGGCTGGGGCCTTCTGACACTGCCAGCAACCCCTGTGACGGAGGCTTATCTGGTAGCTaGAACCATGGGGTAGGTTGT | + |
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Preference number: 5 (lower is better) Translates to: DRSPGLGPSDTASNPCDGGLSGS*NHGVGC Trigger: ACAACCTACCCCATGGTTCAAGCTACCAGATAAGCC...TCCGTCACAGGGGTTGCTGGCAGTGTCAGAAGGCCCCAGCCCAGGACTCCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CAA 90 bp | GGACCTAAAGTGGCTTGGAAGGCAATGCCAGTGGACTACTTAGAACAGCAGGCCTGGAAGCCCAGAGCCTaGGCCTGCTGGATAGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: GPKVAWKAMPVDYLEQQAWKPRA*ACWIGW Trigger: CCACCCTATCCAGCAGGCCAAGGCTCTGGGCTTCCA...GGCCTGCTGTTCTAAGTAGTCCACTGGCATTGCCTTCCAAGCCACTTTAGGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CAA 90 bp | CCCTTGTCCAGCTGGTTTCACAGCTGCCCTGAAGAACTTGGGGCAGAAGCTTGTCCCTGCTCCATCATCTaGCCCATGGCCAGGTCCACA | + |
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Preference number: 5 (lower is better) Translates to: PLSSWFHSCPEELGAEACPCSII*PMARST Trigger: TGTGGACCTGGCCATGGGCAAGATGATGGAGCAGGG...ACAAGCTTCTGCCCCAAGTTCTTCAGGGCAGCTGTGAAACCAGCTGGACAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CAA 90 bp | GTGTGTCTGTCCCATGATGGTCTAGCCTCGAGCTGCCTAGACTCCATTGCTGCCGAACCATGGGGTAGGTaGTGGCTGGAGAGAAATTGG | + |
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Preference number: 5 (lower is better) Translates to: VCLSHDGLASSCLDSIAAEPWGR*WLERNW Trigger: CCAATTTCTCTCCAGCCACAACCTACCCCATGGTTC...GGCAGCAATGGAGTCTAGGCAGCTCGAGGCTAGACCATCATGGGACAGACACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CAA 90 bp | GAAGGCAATGCCAGTGGACTACTTAGAACAGCAGGCCAGGCCTCACCCGACAGGTACCACTTGGAGTCCTaGTGTAGCACAACCCCTAAT | + |
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Preference number: 5 (lower is better) Translates to: EGNASGLLRTAGQASPDRYHLES*CSTTPN Trigger: ATTAGGGGTTGTGCTACACAAGGACTCCAAGTGGTA...CCTGTCGGGTGAGGCCTGGCCTGCTGTTCTAAGTAGTCCACTGGCATTGCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CAA 90 bp | CTTCCCTTGTCCAGCTGGTTTCACAGCTGCCCTGAAGAACTTGGGGCAGAAGCTCACTGCTGGTACCACTaGGAGTCCTTGTGTAGCACA | + |
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Preference number: 5 (lower is better) Translates to: LPLSSWFHSCPEELGAEAHCWYH*ESLCST Trigger: TGTGCTACACAAGGACTCCAAGTGGTACCAGCAGTG...AGCTTCTGCCCCAAGTTCTTCAGGGCAGCTGTGAAACCAGCTGGACAAGGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CAA 90 bp | CCCTTGTCCAGCTGGTTTCACAGCTGCCCTGAAGAACTTGGGGCAGAAGCTTGTTCGCCTTTGGAGTTCTaGATCACCATCACCACCTGG | + |
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Preference number: 5 (lower is better) Translates to: PLSSWFHSCPEELGAEACSPLEF*ITITTW Trigger: CCAGGTGGTGATGGTGATCAAGAACTCCAAAGGCGA...ACAAGCTTCTGCCCCAAGTTCTTCAGGGCAGCTGTGAAACCAGCTGGACAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CAA 90 bp | AACAAAACAAAAGGACCTAAAGTGGCTTGGAAGGCAATGCCAGTGGACTACTTATTGAAGGCTGCCGTCTaGCCCAGCTTCTCCCCGCTC | + |
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Preference number: 5 (lower is better) Translates to: NKTKGPKVAWKAMPVDYLLKAAV*PSFSPL Trigger: GAGCGGGGAGAAGCTGGGCAAGACGGCAGCCTTCAA...TAAGTAGTCCACTGGCATTGCCTTCCAAGCCACTTTAGGTCCTTTTGTTTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CAA 90 bp | GGACCTAAAGTGGCTTGGAAGGCAATGCCAGTGGACTACTTAGAACAGCAGGCCTCATACACCTCGCCTTaGGAGTTCTTGATCACCATC | + |
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Preference number: 5 (lower is better) Translates to: GPKVAWKAMPVDYLEQQASYTSP*EFLITI Trigger: GATGGTGATCAAGAACTCCAAAGGCGAGGTGTATGA...GGCCTGCTGTTCTAAGTAGTCCACTGGCATTGCCTTCCAAGCCACTTTAGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CAA 90 bp | AACAAAACAAAAGGACCTAAAGTGGCTTGGAAGGCAATGCCAGTGGACTACTTAAGCTTCTCCCCGCTCTaGGACACTGACTCCGCTGAC | + |
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Preference number: 5 (lower is better) Translates to: NKTKGPKVAWKAMPVDYLSFSPL*DTDSAD Trigger: GTCAGCGGAGTCAGTGTCCAAGAGCGGGGAGAAGCT...TAAGTAGTCCACTGGCATTGCCTTCCAAGCCACTTTAGGTCCTTTTGTTTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CAA 90 bp | CAAAGTGTCTCTGTGTGTCTGTCCCATGATGGTCTAGCCTCGAGCTGCCTAGACACAACGTTGTTATCTTaGAAGTCCTTCCACTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: QSVSVCLSHDGLASSCLDTTLLS*KSFHCW Trigger: CCAGCAGTGGAAGGACTTCAAAGATAACAACGTTGT...GTCTAGGCAGCTCGAGGCTAGACCATCATGGGACAGACACACAGAGACACTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CAA 90 bp | GTGTGTCTGTCCCATGATGGTCTAGCCTCGAGCTGCCTAGACTCCATTGCTGCCCGGTTGAATACAACGTaGTTATCTTTGAAGTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: VCLSHDGLASSCLDSIAARLNTT*LSLKSF Trigger: GAAGGACTTCAAAGATAACAACGTTGTATTCAACCG...GGCAGCAATGGAGTCTAGGCAGCTCGAGGCTAGACCATCATGGGACAGACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CCA 90 bp | CGCACAGTTTCTGATTCGATGGATTTATACTTCCTTCTGGCTTCCTaGAGAGCATCCGACTCTTCTAGCTTCTTGGCCTCATCTCGGAAC | + |
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Preference number: 5 (lower is better) Translates to: RTVSDSMDLYFLLAS*RASDSSSFLASSRN Trigger: GTTCCGAGATGAGGCCAAGAAGCTAGAAGAGTCGGATGCTCTCCAGGAAGCCAGAAGGAAGTATAAATCCATCGAATCAGAAACTGTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CCA 90 bp | CACTGGTACGCACAGTTTCTGATTCGATGGATTTATACTTCCTTCTaGCTTCCTGGAGAGCATCCGACTCTTCTAGCTTCTTGGCCTCAT | + |
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Preference number: 5 (lower is better) Translates to: HWYAQFLIRWIYTSF*LPGEHPTLLASWPH Trigger: ATGAGGCCAAGAAGCTAGAAGAGTCGGATGCTCTCCAGGAAGCCAGAAGGAAGTATAAATCCATCGAATCAGAAACTGTGCGTACCAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CCA 90 bp | AAGCGGTTGAATACAACGTTGTTATCTTTGAAGTCCTTCCACTGCTaGTACCACTTGGAGTCCTTGTGTAGCACAACCCCTAATGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: KRLNTTLLSLKSFHC*YHLESLCSTTPNAS Trigger: GGAAGCATTAGGGGTTGTGCTACACAAGGACTCCAAGTGGTACCAGCAGTGGAAGGACTTCAAAGATAACAACGTTGTATTCAACCGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CAA 90 bp | GGACCTAAAGTGGCTTGGAAGGCAATGCCAGTGGACTACTTAGAACAGCAGGCCATCTCAAAGAAGCGGTaGAATACAACGTTGTTATCT | + |
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Preference number: 5 (lower is better) Translates to: GPKVAWKAMPVDYLEQQAISKKR*NTTLLS Trigger: AGATAACAACGTTGTATTCAACCGCTTCTTTGAGAT...GGCCTGCTGTTCTAAGTAGTCCACTGGCATTGCCTTCCAAGCCACTTTAGGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS GCA 90 bp | AAGAAGCGGTTGAATACAACGTTGTTATCTTTGAAGTCCTTCCACTaGTGGTACCACTTGGAGTCCTTGTGTAGCACAACCCCTAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: KKRLNTTLLSLKSFH*WYHLESLCSTTPNA Trigger: AGCATTAGGGGTTGTGCTACACAAGGACTCCAAGTGGTACCAGCAGTGGAAGGACTTCAAAGATAACAACGTTGTATTCAACCGCTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CAA 90 bp | GAAGCTTGTTCACAGCTGTATCAGATGTGGCAAAGTGTCTCTGTGTGTCTGTCCTTAGCCTCGAACACTTaGCTTTCTTTGAATTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: EACSQLYQMWQSVSVCLSLASNT*LSLNFA Trigger: AGCAAAATTCAAAGAAAGCAAAGTGTTCGAGGCTAA...GGACAGACACACAGAGACACTTTGCCACATCTGATACAGCTGTGAACAAGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CAA 90 bp | GCTCTTCTGCGCTTTGGTGTTTTATTAGGTCCAGATCTTAGGCTTATGTACAGGTTGGCTAATTCTTGTTaGATGTTATCTAGCAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ALLRFGVLLGPDLRLMYRLANSC*MLSSKP Trigger: AGGCTTGCTAGATAACATCAAACAAGAATTAGCCAA...CCTGTACATAAGCCTAAGATCTGGACCTAATAAAACACCAAAGCGCAGAAGAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS-3UTR CAA 90 bp | AACAAAACAAAAGGACCTAAAGTGGCTTGGAAGGCAATGCCAGTGGACTACTTAAACACTTTGCTTTCTTaGAATTTTGCTCCAGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: NKTKGPKVAWKAMPVDYLNTLLS*NFAPAN Trigger: GTTTGCTGGAGCAAAATTCAAAGAAAGCAAAGTGTT...TAAGTAGTCCACTGGCATTGCCTTCCAAGCCACTTTAGGTCCTTTTGTTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS GCA 72 bp | AGCTTCTCCCCGCTCTTGGACACTGACTCCGCTGACTaGTTGGCTGTCCTGGCGGCCTCTTCTACCCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SFSPLLDTDSAD*LAVLAASSTPS Trigger: GGAGGGGGTAGAAGAGGCCGCCAGGACAGCCAAGCAGTCAGCGGAGTCAGTGTCCAAGAGCGGGGAGAAGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CAA 90 bp | TTGCCCAGCTTCTCCCCGCTCTTGGACACTGACTCCGCTGACTGCTaGGCTGTCCTGGCGGCCTCTTCTACCCCCTCCTTGATCTTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LPSFSPLLDTDSADC*AVLAASSTPSLIFR Trigger: CCGGAAGATCAAGGAGGGGGTAGAAGAGGCCGCCAGGACAGCCAAGCAGTCAGCGGAGTCAGTGTCCAAGAGCGGGGAGAAGCTGGGCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CAA 72 bp | TTCTCCCCGCTCTTGGACACTGACTCCGCTGACTGCTaGGCTGTCCTGGCGGCCTCTTCTACCCCCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FSPLLDTDSADC*AVLAASSTPSL Trigger: CAAGGAGGGGGTAGAAGAGGCCGCCAGGACAGCCAAGCAGTCAGCGGAGTCAGTGTCCAAGAGCGGGGAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CAA 72 bp | TTGAAGGCTGCCGTCTTGCCCAGCTTCTCCCCGCTCTaGGACACTGACTCCGCTGACTGCTTGGCTGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LKAAVLPSFSPL*DTDSADCLAVL Trigger: CAGGACAGCCAAGCAGTCAGCGGAGTCAGTGTCCAAGAGCGGGGAGAAGCTGGGCAAGACGGCAGCCTTCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS TCA 72 bp | CTGAGATGTCCAGAAGGCGCCAGGCAGCATAAGGGTTaGGCTCCTCCTGGTCTCTGCAGAGTGCCCACACGT | + |
|
Preference number: 6 (lower is better) Translates to: LRCPEGARQHKG*APPGLCRVPTR Trigger: ACGTGTGGGCACTCTGCAGAGACCAGGAGGAGCTCAACCCTTATGCTGCCTGGCGCCTTCTGGACATCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CCA 72 bp | CATCACCACCTGGGCCTGAAAGGTAACGATCAGCACTaGGCCCTGCTCCATCATCTTGCCCATGGCCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: HHHLGLKGNDQH*ALLHHLAHGQV Trigger: GACCTGGCCATGGGCAAGATGATGGAGCAGGGCCCAGTGCTGATCGTTACCTTTCAGGCCCAGGTGGTGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS TCA 72 bp | CCTTCTTCACTGACTCTACACCCTGGGAGATGGCTTTaGAGGCTGCCGTCTTGCCCAGCTTCTCCCCGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PSSLTLHPGRWL*RLPSCPASPRS Trigger: AGAGCGGGGAGAAGCTGGGCAAGACGGCAGCCTTCAAAGCCATCTCCCAGGGTGTAGAGTCAGTGAAGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS GCA 72 bp | TGGTCTCTGCAGAGTGCCCACACGTACAGCATTCGCTaGACCTTGTCCGGGTCACCATCATACACCTCGCCT | + |
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Preference number: 6 (lower is better) Translates to: WSLQSAHTYSIR*TLSGSPSYTSP Trigger: AGGCGAGGTGTATGATGGTGACCCGGACAAGGTGCAGCGAATGCTGTACGTGTGGGCACTCTGCAGAGACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS GCA 72 bp | AGCATAAGGGTTGAGCTCCTCCTGGTCTCTGCAGAGTaGCCACACGTACAGCATTCGCTGCACCTTGTCCGG | + |
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Preference number: 6 (lower is better) Translates to: SIRVELLLVSAE*PHVQHSLHLVR Trigger: CCGGACAAGGTGCAGCGAATGCTGTACGTGTGGGCACTCTGCAGAGACCAGGAGGAGCTCAACCCTTATGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CAA 90 bp | TCCGCTGACTGCTTGGCTGTCCTGGCGGCCTCTTCTACCCCCTCCTaGATCTTCCGGCCAAGGTCACTCTTACTGACTTCATCAAGACTC | + |
|
Preference number: 6 (lower is better) Translates to: SADCLAVLAASSTPS*IFRPRSLLLTSSRL Trigger: GAGTCTTGATGAAGTCAGTAAGAGTGACCTTGGCCGGAAGATCAAGGAGGGGGTAGAAGAGGCCGCCAGGACAGCCAAGCAGTCAGCGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CAA 72 bp | TGCTTGGCTGTCCTGGCGGCCTCTTCTACCCCCTCCTaGATCTTCCGGCCAAGGTCACTCTTACTGACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CLAVLAASSTPS*IFRPRSLLLTS Trigger: TGAAGTCAGTAAGAGTGACCTTGGCCGGAAGATCAAGGAGGGGGTAGAAGAGGCCGCCAGGACAGCCAAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS TCA 72 bp | CTGTCCAAGCACGCTCTCGTCAAGCTCCTTCTTCACTaGCTCTACACCCTGGGAGATGGCTTTGAAGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: LSKHALVKLLLH*LYTLGDGFEGC Trigger: GCAGCCTTCAAAGCCATCTCCCAGGGTGTAGAGTCAGTGAAGAAGGAGCTTGACGAGAGCGTGCTTGGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CAA 72 bp | GTCTTTGAGAAAAGACCTCCTAGCAAGTCAGTGACCTaGTCGGTTAAGGCCCGCGACGCCCGGATGAGGACA | + |
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Preference number: 6 (lower is better) Translates to: VFEKRPPSKSVT*SVKARDARMRT Trigger: TGTCCTCATCCGGGCGTCGCGGGCCTTAACCGACAAGGTCACTGACTTGCTAGGAGGTCTTTTCTCAAAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CAA 72 bp | GTGTCAGCTCTCTTCCTGGCCGGCTTATCTGGTAGCTaGAACCATGGGGTAGGTTGTGGCTGGAGAGAAATT | + |
|
Preference number: 6 (lower is better) Translates to: VSALFLAGLSGS*NHGVGCGWREI Trigger: AATTTCTCTCCAGCCACAACCTACCCCATGGTTCAAGCTACCAGATAAGCCGGCCAGGAAGAGAGCTGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CAA 90 bp | GACATTTCTGTCTTTGAGAAAAGACCTCCTAGCAAGTCAGTGACCTaGTCGGTTAAGGCCCGCGACGCCCGGATGAGGACATTGTCACTT | + |
|
Preference number: 6 (lower is better) Translates to: DISVFEKRPPSKSVT*SVKARDARMRTLSL Trigger: AAGTGACAATGTCCTCATCCGGGCGTCGCGGGCCTTAACCGACAAGGTCACTGACTTGCTAGGAGGTCTTTTCTCAAAGACAGAAATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CAA 90 bp | TCAGTGACCTTGTCGGTTAAGGCCCGCGACGCCCGGATGAGGACATaGTCACTTTCATCATACTTCATCTTCATCTCAAAGAAGCGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SVTLSVKARDARMRT*SLSSYFIFISKKRL Trigger: CAACCGCTTCTTTGAGATGAAGATGAAGTATGATGAAAGTGACAATGTCCTCATCCGGGCGTCGCGGGCCTTAACCGACAAGGTCACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CAA 72 bp | TTGAAGTCCTTCCACTGCTGGTACCACTTGGAGTCCTaGTGTAGCACAACCCCTAATGCTTCCTCATTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LKSFHCWYHLES*CSTTPNASSLA Trigger: GGCTAATGAGGAAGCATTAGGGGTTGTGCTACACAAGGACTCCAAGTGGTACCAGCAGTGGAAGGACTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CAA 72 bp | TCTCACACTGATGAAGAAAGTGGTCCTTGTCAAAGGTaGGGTCCACTCTCAGGATCTCCGTTAGCACCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SHTDEESGPCQR*GPLSGSPLAPL Trigger: CAGAGGTGCTAACGGAGATCCTGAGAGTGGACCCAACCTTTGACAAGGACCACTTTCTTCATCAGTGTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CAA 72 bp | TTGTCGGTTAAGGCCCGCGACGCCCGGATGAGGACATaGTCACTTTCATCATACTTCATCTTCATCTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LSVKARDARMRT*SLSSYFIFISK Trigger: CTTTGAGATGAAGATGAAGTATGATGAAAGTGACAATGTCCTCATCCGGGCGTCGCGGGCCTTAACCGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CAA 90 bp | TTGTTATCTTTGAAGTCCTTCCACTGCTGGTACCACTTGGAGTCCTaGTGTAGCACAACCCCTAATGCTTCCTCATTAGCCTCGAACACT | + |
|
Preference number: 6 (lower is better) Translates to: LLSLKSFHCWYHLES*CSTTPNASSLASNT Trigger: AGTGTTCGAGGCTAATGAGGAAGCATTAGGGGTTGTGCTACACAAGGACTCCAAGTGGTACCAGCAGTGGAAGGACTTCAAAGATAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CAA 72 bp | TTGTTATCTTTGAAGTCCTTCCACTGCTGGTACCACTaGGAGTCCTTGTGTAGCACAACCCCTAATGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLSLKSFHCWYH*ESLCSTTPNAS Trigger: GGAAGCATTAGGGGTTGTGCTACACAAGGACTCCAAGTGGTACCAGCAGTGGAAGGACTTCAAAGATAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CAA 90 bp | AATACAACGTTGTTATCTTTGAAGTCCTTCCACTGCTGGTACCACTaGGAGTCCTTGTGTAGCACAACCCCTAATGCTTCCTCATTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: NTTLLSLKSFHCWYH*ESLCSTTPNASSLA Trigger: GGCTAATGAGGAAGCATTAGGGGTTGTGCTACACAAGGACTCCAAGTGGTACCAGCAGTGGAAGGACTTCAAAGATAACAACGTTGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CCA 72 bp | GCACAGTTTCTGATTCGATGGATTTATACTTCCTTCTaGCTTCCTGGAGAGCATCCGACTCTTCTAGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: AQFLIRWIYTSF*LPGEHPTLLAS Trigger: AGAAGCTAGAAGAGTCGGATGCTCTCCAGGAAGCCAGAAGGAAGTATAAATCCATCGAATCAGAAACTGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CCA 72 bp | AATACAACGTTGTTATCTTTGAAGTCCTTCCACTGCTaGTACCACTTGGAGTCCTTGTGTAGCACAACCCCT | + |
|
Preference number: 6 (lower is better) Translates to: NTTLLSLKSFHC*YHLESLCSTTP Trigger: AGGGGTTGTGCTACACAAGGACTCCAAGTGGTACCAGCAGTGGAAGGACTTCAAAGATAACAACGTTGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CAA 72 bp | ATCTCAAAGAAGCGGTTGAATACAACGTTGTTATCTTaGAAGTCCTTCCACTGCTGGTACCACTTGGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ISKKRLNTTLLS*KSFHCWYHLES Trigger: GGACTCCAAGTGGTACCAGCAGTGGAAGGACTTCAAAGATAACAACGTTGTATTCAACCGCTTCTTTGAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CAA 90 bp | TTCATCTTCATCTCAAAGAAGCGGTTGAATACAACGTTGTTATCTTaGAAGTCCTTCCACTGCTGGTACCACTTGGAGTCCTTGTGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: FIFISKKRLNTTLLS*KSFHCWYHLESLCS Trigger: GCTACACAAGGACTCCAAGTGGTACCAGCAGTGGAAGGACTTCAAAGATAACAACGTTGTATTCAACCGCTTCTTTGAGATGAAGATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CAA 72 bp | ACAACCCCTAATGCTTCCTCATTAGCCTCGAACACTTaGCTTTCTTTGAATTTTGCTCCAGCAAACTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: TTPNASSLASNT*LSLNFAPANSV Trigger: GACAGAGTTTGCTGGAGCAAAATTCAAAGAAAGCAAAGTGTTCGAGGCTAATGAGGAAGCATTAGGGGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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| CDS CAA 72 bp | TTCATCTTCATCTCAAAGAAGCGGTTGAATACAACGTaGTTATCTTTGAAGTCCTTCCACTGCTGGTACCAC | + |
|
Preference number: 6 (lower is better) Translates to: FIFISKKRLNTT*LSLKSFHCWYH Trigger: GTGGTACCAGCAGTGGAAGGACTTCAAAGATAACAACGTTGTATTCAACCGCTTCTTTGAGATGAAGATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003029.14 |
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