Pregenerated sensors for TIMM23 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013701Ensembl transcript IDs: ENSMUST00000013845.13, ENSMUST00000163379.2, ENSMUST00000170331.8, ENSMUST00000226683.2
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGTTGGAGCAGGGAACCTTTCATGTGCTCCCAGTTGTTATACAGTaGATAGAGACTGGTGAGTGTCAGTCCTGCCAGGCCACCGCGTGC | + |
|
Preference number: 1 (lower is better) Translates to: LLEQGTFHVLPVVIQ*IETGECQSCQATAC Trigger: GCACGCGGTGGCCTGGCAGGACTGACACTCACCAGTCTCTATGCACTGTATAACAACTGGGAGCACATGAAAGGTTCCCTGCTCCAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163379.2 ENSMUST00000170331.8 |
||
| 3UTR TCA 90 bp | AACCTTTCATGTGCTCCCAGTTGTTATACAGTGCATAGAGACTGGTaGGTGTCAGTCCTGCCAGGCCACCGCGTGCTATTCCTCGAAGAC | + |
|
Preference number: 1 (lower is better) Translates to: NLSCAPSCYTVHRDW*VSVLPGHRVLFLED Trigger: GTCTTCGAGGAATAGCACGCGGTGGCCTGGCAGGACTGACACTCACCAGTCTCTATGCACTGTATAACAACTGGGAGCACATGAAAGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163379.2 ENSMUST00000170331.8 |
||
| 3UTR GCA 90 bp | CTCCCAGTTGTTATACAGTGCATAGAGACTGGTGAGTGTCAGTCCTaGCAGGCCACCGCGTGCTATTCCTCGAAGACCACCTGTACATTT | + |
|
Preference number: 1 (lower is better) Translates to: LPVVIQCIETGECQS*QATACYSSKTTCTF Trigger: AAATGTACAGGTGGTCTTCGAGGAATAGCACGCGGTGGCCTGGCAGGACTGACACTCACCAGTCTCTATGCACTGTATAACAACTGGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163379.2 ENSMUST00000170331.8 |
||
| 3UTR TCA 90 bp | ACTATGAAGTGTCCCCCATTCCTGAGGTGCCAAAAATCTTCAGAGTaGCTGTTGGAGCAGGGAACCTTTCATGTGCTCCCAGTTGTTATA | + |
|
Preference number: 1 (lower is better) Translates to: TMKCPPFLRCQKSSE*LLEQGTFHVLPVVI Trigger: TATAACAACTGGGAGCACATGAAAGGTTCCCTGCTCCAACAGTCACTCTGAAGATTTTTGGCACCTCAGGAATGGGGGACACTTCATAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000163379.2 ENSMUST00000170331.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGCCAAAAATCTTCAGAGTGACTGTTGGAGCAGGGAACCTTTCATGTGCTCCCTGCCAGGCCACCGCGTaGTATTCCTCGAAGACCACC | + |
|
Preference number: 2 (lower is better) Translates to: VPKIFRVTVGAGNLSCAPCQATA*YSSKTT Trigger: GGTGGTCTTCGAGGAATAGCACGCGGTGGCCTGGCA...GGGAGCACATGAAAGGTTCCCTGCTCCAACAGTCACTCTGAAGATTTTTGGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163379.2 ENSMUST00000170331.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAGGAGAAGAGAACACATACTCAGTGAGCCACCAAGGGGTTGGCTTCCACTCAGTGCATAGAGACTGGTaGGTGTCAGTCCTGCCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: KGEENTYSVSHQGVGFHSVHRDW*VSVLPG Trigger: GCCTGGCAGGACTGACACTCACCAGTCTCTATGCAC...TGAGTGGAAGCCAACCCCTTGGTGGCTCACTGAGTATGTGTTCTCTTCTCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170331.8 |
||
| 3UTR-3UTR TCA 90 bp | CCAAAAATCTTCAGAGTGACTGTTGGAGCAGGGAACCTTTCATGTGCTCCCAGTGTGCATAGAGACTGGTaGGTGTCAGTCCTGCCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: PKIFRVTVGAGNLSCAPSVHRDW*VSVLPG Trigger: GCCTGGCAGGACTGACACTCACCAGTCTCTATGCAC...ACTGGGAGCACATGAAAGGTTCCCTGCTCCAACAGTCACTCTGAAGATTTTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163379.2 ENSMUST00000170331.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGTTTTCCAGTTTGGGGTGCAAGATCATCTCCAAAGGAGAAGAGAACACATACTGCCAGGCCACCGCGTaGTATTCCTCGAAGACCACC | + |
|
Preference number: 2 (lower is better) Translates to: WFSSLGCKIISKGEENTYCQATA*YSSKTT Trigger: GGTGGTCTTCGAGGAATAGCACGCGGTGGCCTGGCA...GTATGTGTTCTCTTCTCCTTTGGAGATGATCTTGCACCCCAAACTGGAAAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170331.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAGAGAACACATACTCAGTGAGCCACCAAGGGGTTGGCTTCCACTCACTGAGGAGGGAACCTTTCATGTaGTCCCAGTTGTTATACAGT | + |
|
Preference number: 2 (lower is better) Translates to: EENTYSVSHQGVGFHSLRREPFM*SQLLYS Trigger: ACTGTATAACAACTGGGAGCACATGAAAGGTTCCCT...CCTCAGTGAGTGGAAGCCAACCCCTTGGTGGCTCACTGAGTATGTGTTCTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170331.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGCCAAAAATCTTCAGAGTGACTGTTGGAGCAGGGAACCTTTCATGTGCTCCCCTTCAGAGTGACTGTTaGAGCAGGGAACCTTTCATG | + |
|
Preference number: 2 (lower is better) Translates to: VPKIFRVTVGAGNLSCAPLQSDC*SREPFM Trigger: CATGAAAGGTTCCCTGCTCCAACAGTCACTCTGAAG...GGGAGCACATGAAAGGTTCCCTGCTCCAACAGTCACTCTGAAGATTTTTGGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163379.2 ENSMUST00000170331.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCATCTCCAAAGGAGAAGAGAACACATACTCAGTGAGCCACCAAGGGGTTGGCTTTTCCAGTTTGGGGTaGAAGATCATCTCCAAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: IISKGEENTYSVSHQGVGFSSLG*KIISKG Trigger: TCCTTTGGAGATGATCTTGCACCCCAAACTGGAAAA...GCCAACCCCTTGGTGGCTCACTGAGTATGTGTTCTCTTCTCCTTTGGAGATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000013845.13 ENSMUST00000170331.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAATCTTCAGAGTGACTGTTGGAGCAGGGAACCTTTCATGTGCTCCCAGTTGTAGGGAACCTTTCATGTaGTCCCAGTTGTTATACAGT | + |
|
Preference number: 2 (lower is better) Translates to: KIFRVTVGAGNLSCAPSCREPFM*SQLLYS Trigger: ACTGTATAACAACTGGGAGCACATGAAAGGTTCCCT...ACAACTGGGAGCACATGAAAGGTTCCCTGCTCCAACAGTCACTCTGAAGATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163379.2 ENSMUST00000170331.8 |
||
| 3UTR-3UTR CCA 90 bp | CAACTCCAGACTGGCTTATTAATTGATCTGGATGACTATGAAGTGTCCCCCATTCTTCAGAGTGACTGTTaGAGCAGGGAACCTTTCATG | + |
|
Preference number: 2 (lower is better) Translates to: QLQTGLLIDLDDYEVSPILQSDC*SREPFM Trigger: CATGAAAGGTTCCCTGCTCCAACAGTCACTCTGAAG...AATGGGGGACACTTCATAGTCATCCAGATCAATTAATAAGCCAGTCTGGAGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170331.8 |
||
| 3UTR GCA 72 bp | GTTATACAGTGCATAGAGACTGGTGAGTGTCAGTCCTaGCAGGCCACCGCGTGCTATTCCTCGAAGACCACC | + |
|
Preference number: 3 (lower is better) Translates to: VIQCIETGECQS*QATACYSSKTT Trigger: GGTGGTCTTCGAGGAATAGCACGCGGTGGCCTGGCAGGACTGACACTCACCAGTCTCTATGCACTGTATAAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163379.2 ENSMUST00000170331.8 |
||
| 3UTR CCA 72 bp | AGAAGAGAACACATACTCAGTGAGCCACCAAGGGGTTaGCTTCCACTCACTGAGGGCAAGCAGTGCAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: RREHILSEPPRG*LPLTEGKQCSP Trigger: TGGACTGCACTGCTTGCCCTCAGTGAGTGGAAGCCAACCCCTTGGTGGCTCACTGAGTATGTGTTCTCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013845.13 ENSMUST00000170331.8 |
||
| 3UTR GCA 72 bp | CAGGGAACCTTTCATGTGCTCCCAGTTGTTATACAGTaGATAGAGACTGGTGAGTGTCAGTCCTGCCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: QGTFHVLPVVIQ*IETGECQSCQA Trigger: GGCCTGGCAGGACTGACACTCACCAGTCTCTATGCACTGTATAACAACTGGGAGCACATGAAAGGTTCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163379.2 ENSMUST00000170331.8 |
||
| 3UTR-3UTR CAA 90 bp | CACATACTCAGTGAGCCACCAAGGGGTTGGCTTCCACTCACTGAGGGCAAGCAGAATCAGAGTCTCCAATaGTTCAAAGTAACTGTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: HILSEPPRGWLPLTEGKQNQSLQ*FKVTVG Trigger: ACCTACAGTTACTTTGAACAATTGGAGACTCTGATT...CTGCTTGCCCTCAGTGAGTGGAAGCCAACCCCTTGGTGGCTCACTGAGTATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000013845.13 ENSMUST00000170331.8 |
||
| 3UTR TCA 72 bp | CTGAGGGCAAGCAGTGCAGTCCAGGCTAACCATCCATaGTCTTTGTCACAGCAAATCAGAGTCTCCAATTGT | + |
|
Preference number: 3 (lower is better) Translates to: LRASSAVQANHP*SLSQQIRVSNC Trigger: ACAATTGGAGACTCTGATTTGCTGTGACAAAGATCATGGATGGTTAGCCTGGACTGCACTGCTTGCCCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013845.13 ENSMUST00000170331.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCCAGTTTGGGGTGCAAGATCATCTCCAAAGGAGAAGAGAACACATACTCATGCCAGGCCACCGCGTaGTATTCCTCGAAGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: FSSLGCKIISKGEENTYSCQATA*YSSKTT Trigger: GGTGGTCTTCGAGGAATAGCACGCGGTGGCCTGGCA...TGAGTATGTGTTCTCTTCTCCTTTGGAGATGATCTTGCACCCCAAACTGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013845.13 |
||
| CDS-3UTR GCA 90 bp | ACATACTCAGTGAGCCACCAAGGGGTTGGCTTCCACTCACTGAGGGCAAGCAGTAGGGAACCTTTCATGTaGTCCCAGTTGTTATACAGT | + |
|
Preference number: 4 (lower is better) Translates to: TYSVSHQGVGFHSLRASSREPFM*SQLLYS Trigger: ACTGTATAACAACTGGGAGCACATGAAAGGTTCCCT...ACTGCTTGCCCTCAGTGAGTGGAAGCCAACCCCTTGGTGGCTCACTGAGTATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013845.13 |
||
| CDS-3UTR TCA 90 bp | CAACTCCAGACTGGCTTATTAATTGATCTGGATGACTATGAAGTGTCCCCCATTGTGCATAGAGACTGGTaGGTGTCAGTCCTGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QLQTGLLIDLDDYEVSPIVHRDW*VSVLPG Trigger: GCCTGGCAGGACTGACACTCACCAGTCTCTATGCAC...AATGGGGGACACTTCATAGTCATCCAGATCAATTAATAAGCCAGTCTGGAGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013845.13 |
||
| CDS-3UTR TCA 90 bp | TTAATTGATCTGGATGACTATGAAGTGTCCCCCATTCCTGAGGTGCCAAAAATCGTGCATAGAGACTGGTaGGTGTCAGTCCTGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LIDLDDYEVSPIPEVPKIVHRDW*VSVLPG Trigger: GCCTGGCAGGACTGACACTCACCAGTCTCTATGCAC...GATTTTTGGCACCTCAGGAATGGGGGACACTTCATAGTCATCCAGATCAATTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000013845.13 ENSMUST00000226683.2 |
||
| CDS-3UTR GCA 90 bp | TTATTAATTGATCTGGATGACTATGAAGTGTCCCCCATTCCTGAGGTGCCAAAATGCCAGGCCACCGCGTaGTATTCCTCGAAGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: LLIDLDDYEVSPIPEVPKCQATA*YSSKTT Trigger: GGTGGTCTTCGAGGAATAGCACGCGGTGGCCTGGCA...TTTTGGCACCTCAGGAATGGGGGACACTTCATAGTCATCCAGATCAATTAATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000013845.13 ENSMUST00000226683.2 |
||
| 3UTR CAA 72 bp | TATGGCCTGAATTTGGAGAGTAAGTGGTTTTCCAGTTaGGGGTGCAAGATCATCTCCAAAGGAGAAGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YGLNLESKWFSS*GCKIISKGEEN Trigger: GTTCTCTTCTCCTTTGGAGATGATCTTGCACCCCAAACTGGAAAACCACTTACTCTCCAAATTCAGGCCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000013845.13 |
||
| CDS-3UTR GCA 90 bp | TTAATTGATCTGGATGACTATGAAGTGTCCCCCATTCCTGAGGTGCCAAAAATCAGGGAACCTTTCATGTaGTCCCAGTTGTTATACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LIDLDDYEVSPIPEVPKIREPFM*SQLLYS Trigger: ACTGTATAACAACTGGGAGCACATGAAAGGTTCCCT...GATTTTTGGCACCTCAGGAATGGGGGACACTTCATAGTCATCCAGATCAATTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000013845.13 ENSMUST00000226683.2 |
||
| 3UTR CAA 72 bp | TCCATGATCTTTGTCACAGCAAATCAGAGTCTCCAATaGTTCAAAGTAACTGTAGGTACAAGACAGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SMIFVTANQSLQ*FKVTVGTRQKA Trigger: TGCTTTCTGTCTTGTACCTACAGTTACTTTGAACAATTGGAGACTCTGATTTGCTGTGACAAAGATCATGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013845.13 ENSMUST00000170331.8 |
||
| CDS-3UTR CAA 90 bp | TGCCAGGCCACCGCGTGCTATTCCTCGAAGACCACCTGTACATTTATACAACATCCGCTGGTGGATTTGTaGCTACTTCCTCCGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: CQATACYSSKTTCTFIQHPLVDL*LLPPPP Trigger: AGGTGGCGGAGGAAGTAGCAACAAATCCACCAGCGG...ATGTTGTATAAATGTACAGGTGGTCTTCGAGGAATAGCACGCGGTGGCCTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163379.2 ENSMUST00000170331.8 |
||
| CDS-3UTR CAA 90 bp | AATCTTCAGAGTGACTGTTGGAGCAGGGAACCTTTCATGTGCTCCCAGTTGTTACCGCTGGTGGATTTGTaGCTACTTCCTCCGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: NLQSDCWSREPFMCSQLLPLVDL*LLPPPP Trigger: AGGTGGCGGAGGAAGTAGCAACAAATCCACCAGCGG...TAACAACTGGGAGCACATGAAAGGTTCCCTGCTCCAACAGTCACTCTGAAGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163379.2 ENSMUST00000170331.8 |
||
| CDS-3UTR CAA 90 bp | CAGTCCAGGCTAACCATCCATGATCTTTGTCACAGCAAATCAGAGTCTCCAATTCCGCTGGTGGATTTGTaGCTACTTCCTCCGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: QSRLTIHDLCHSKSESPIPLVDL*LLPPPP Trigger: AGGTGGCGGAGGAAGTAGCAACAAATCCACCAGCGG...AATTGGAGACTCTGATTTGCTGTGACAAAGATCATGGATGGTTAGCCTGGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000013845.13 ENSMUST00000170331.8 |
||
| CDS-3UTR CAA 90 bp | TTAATTGATCTGGATGACTATGAAGTGTCCCCCATTCCTGAGGTGCCAAAAATCCCGCTGGTGGATTTGTaGCTACTTCCTCCGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: LIDLDDYEVSPIPEVPKIPLVDL*LLPPPP Trigger: AGGTGGCGGAGGAAGTAGCAACAAATCCACCAGCGG...GATTTTTGGCACCTCAGGAATGGGGGACACTTCATAGTCATCCAGATCAATTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000013845.13 ENSMUST00000170331.8 ENSMUST00000226683.2 |
||