Pregenerated sensors for TIMM22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020843Ensembl transcript IDs: ENSMUST00000021203.7, ENSMUST00000120699.8, ENSMUST00000152183.2, ENSMUST00000164102.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AATGGTCCACGTGGACAAGGCTTGGCTTGTTCAACTGATGGCTACTaGCAGCTGAGGCCCCTCTGTGCCAAGGTAGCTGTGATGGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: NGPRGQGLACSTDGY*QLRPLCAKVAVMAA Trigger: TGCTGCCATCACAGCTACCTTGGCACAGAGGGGCCTCAGCTGTCAGTAGCCATCAGTTGAACAAGCCAAGCCTTGTCCACGTGGACCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR GCA 90 bp | CTTGCACACAGAAGGAAGAAGAGCTTCCCGGCTATGGGCAAACACTaGCACTTCCCTATTCAAAGCTGGGGAGCTGAGCCAGGTCAGAAC | + |
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Preference number: 1 (lower is better) Translates to: LAHRRKKSFPAMGKH*HFPIQSWGAEPGQN Trigger: GTTCTGACCTGGCTCAGCTCCCCAGCTTTGAATAGGGAAGTGGCAGTGTTTGCCCATAGCCGGGAAGCTCTTCTTCCTTCTGTGTGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR TCA 90 bp | ATGCCAGCAGTAAAGATACCAAACGCGCCTCCCAAGACAAACCCCTaGCTGTTAACCCCAGGGTCAAGAGAGACATCTCCGGGTTCAAGG | + |
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Preference number: 1 (lower is better) Translates to: MPAVKIPNAPPKTNP*LLTPGSRETSPGSR Trigger: CCTTGAACCCGGAGATGTCTCTCTTGACCCTGGGGTTAACAGTCAGGGGTTTGTCTTGGGAGGCGCGTTTGGTATCTTTACTGCTGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164102.2 |
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| 3UTR TCA 90 bp | GGCTATGGGCAAACACTGCCACTTCCCTATTCAAAGCTGGGGAGCTaGGCCAGGTCAGAACTGAGCCTGGTTCAAAGCTTAATGCGTAAC | + |
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Preference number: 1 (lower is better) Translates to: GYGQTLPLPYSKLGS*ARSELSLVQSLMRN Trigger: GTTACGCATTAAGCTTTGAACCAGGCTCAGTTCTGACCTGGCTCAGCTCCCCAGCTTTGAATAGGGAAGTGGCAGTGTTTGCCCATAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR TCA 90 bp | CCACCAAAAGCCAAAGAAAAGCTTAGCGGAGAACAGGAGTGGTGGTaGACAGGCCTCTGCCATCTGATCTGGGCCAGTAGCTACAGTATG | + |
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Preference number: 1 (lower is better) Translates to: PPKAKEKLSGEQEWW*TGLCHLIWASSYSM Trigger: CATACTGTAGCTACTGGCCCAGATCAGATGGCAGAGGCCTGTTCACCACCACTCCTGTTCTCCGCTAAGCTTTTCTTTGGCTTTTGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR GCA 90 bp | GGCATAAGTTTACTTTGCCCTGCCCTGGGACTCATGATGGATACTTaGACACAGAAGGAAGAAGAGCTTCCCGGCTATGGGCAAACACTG | + |
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Preference number: 1 (lower is better) Translates to: GISLLCPALGLMMDT*TQKEEELPGYGQTL Trigger: CAGTGTTTGCCCATAGCCGGGAAGCTCTTCTTCCTTCTGTGTGCAAGTATCCATCATGAGTCCCAGGGCAGGGCAAAGTAAACTTATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR GCA 90 bp | AACCTGGTTGGAATTCAAGTGGAAAAGTATGGTTGTTCCAATGGCTaGAGAGAGCGATCGAGCAGCGAGGTGTGTCCTTCACACCATCAA | + |
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Preference number: 1 (lower is better) Translates to: NLVGIQVEKYGCSNG*RERSSSEVCPSHHQ Trigger: TTGATGGTGTGAAGGACACACCTCGCTGCTCGATCGCTCTCTGCAGCCATTGGAACAACCATACTTTTCCACTTGAATTCCAACCAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
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| 3UTR CCA 90 bp | GAAAAACCTGGTTGGAATTCAAGTGGAAAAGTATGGTTGTTCCAATaGCTGCAGAGAGCGATCGAGCAGCGAGGTGTGTCCTTCACACCA | + |
|
Preference number: 1 (lower is better) Translates to: EKPGWNSSGKVWLFQ*LQRAIEQRGVSFTP Trigger: TGGTGTGAAGGACACACCTCGCTGCTCGATCGCTCTCTGCAGCCATTGGAACAACCATACTTTTCCACTTGAATTCCAACCAGGTTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
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| 3UTR TCA 90 bp | GGTTTTGTAAGCTGTAGGCATGACCATCAGCCAATCCAATGCCTTTaGGGAGGCAGAGGAGTTACCAGCATGTTGCAATACATCCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: GFVSCRHDHQPIQCL*GGRGVTSMLQYIQE Trigger: TTCCTGGATGTATTGCAACATGCTGGTAACTCCTCTGCCTCCTCAAAGGCATTGGATTGGCTGATGGTCATGCCTACAGCTTACAAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR GCA 90 bp | ATCTCTGGAACTAGAGTTACAGATGGTTGTAACCCACAATGTAGGTaGTGGGAACCAAACCTGGGACCTCTGGTATTAACTACTGAGCCT | + |
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Preference number: 1 (lower is better) Translates to: ISGTRVTDGCNPQCR*WEPNLGPLVLTTEP Trigger: AGGCTCAGTAGTTAATACCAGAGGTCCCAGGTTTGGTTCCCAGCACCTACATTGTGGGTTACAACCATCTGTAACTCTAGTTCCAGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR TCA 90 bp | CTAGAGATCAGGAACAGATGTGTCTGCAAACTGCTGTTTGGTTTATaGGCTCATACTGACCCCCAGCCATCTAAAACAGGAAGCTATTCA | + |
|
Preference number: 1 (lower is better) Translates to: LEIRNRCVCKLLFGL*AHTDPQPSKTGSYS Trigger: TGAATAGCTTCCTGTTTTAGATGGCTGGGGGTCAGTATGAGCTCATAAACCAAACAGCAGTTTGCAGACACATCTGTTCCTGATCTCTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR CAA 90 bp | GCAGCGAGGTGTGTCCTTCACACCATCAACTGTAGAGGGATGCACTaGGCTTCACCCCTGAAGCAGTCCAAGTGTGTAGAAACTGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: AARCVLHTINCRGMH*ASPLKQSKCVETAP Trigger: TGGAGCAGTTTCTACACACTTGGACTGCTTCAGGGGTGAAGCCAAGTGCATCCCTCTACAGTTGATGGTGTGAAGGACACACCTCGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
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| 3UTR CAA 90 bp | TGGCAGGGTGACCACAGTAAGACATTCACGGACCTTTCACCTGGGTaGGGGCCCAAGACCAAGGGTTTTGTAAGCTGTAGGCATGACCAT | + |
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Preference number: 2 (lower is better) Translates to: WQGDHSKTFTDLSPG*GPKTKGFVSCRHDH Trigger: ATGGTCATGCCTACAGCTTACAAAACCCTTGGTCTTGGGCCCCAACCCAGGTGAAAGGTCCGTGAATGTCTTACTGTGGTCACCCTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR-3UTR TCA 90 bp | CCAATGCCTTTGAGGAGGCAGAGGAGTTACCAGCATGTTGCAATACATCCAGGAAGGGAGAGGCCTTGCTaGTGGAGTGGCTGTGGTAAC | + |
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Preference number: 2 (lower is better) Translates to: PMPLRRQRSYQHVAIHPGRERPC*WSGCGN Trigger: GTTACCACAGCCACTCCATCAGCAAGGCCTCTCCCT...TCCTGGATGTATTGCAACATGCTGGTAACTCCTCTGCCTCCTCAAAGGCATTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR-3UTR TCA 90 bp | AACCTGGTTGGAATTCAAGTGGAAAAGTATGGTTGTTCCAATGGCTGCAGAGAGTCCACAGAGCAGCTCTaGAGGTGGCTGGCGTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: NLVGIQVEKYGCSNGCRESTEQL*RWLASS Trigger: AGAGGACGCCAGCCACCTTCAGAGCTGCTCTGTGGA...CTCTCTGCAGCCATTGGAACAACCATACTTTTCCACTTGAATTCCAACCAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
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| 3UTR CAA 90 bp | TGGCATAAGTTTACTTTGCCCTGCCCTGGGACTCATGATGGATACTaGCACACAGAAGGAAGAAGAGCTTCCCGGCTATGGGCAAACACT | + |
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Preference number: 2 (lower is better) Translates to: WHKFTLPCPGTHDGY*HTEGRRASRLWANT Trigger: AGTGTTTGCCCATAGCCGGGAAGCTCTTCTTCCTTCTGTGTGCAAGTATCCATCATGAGTCCCAGGGCAGGGCAAAGTAAACTTATGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR CAA 90 bp | AGAGCAACGCTCCCAGAGTTCCTTAGAGGTTTCCTAGCCTTTCCATaGGATTTGTCACTCTTTGGGCCAGCTGGCATCTTTTGTCAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: RATLPEFLRGFLAFP*DLSLFGPAGIFCQR Trigger: CCTCTGACAAAAGATGCCAGCTGGCCCAAAGAGTGACAAATCCAATGGAAAGGCTAGGAAACCTCTAAGGAACTCTGGGAGCGTTGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR CAA 90 bp | ACGCTCCCAGAGTTCCTTAGAGGTTTCCTAGCCTTTCCATTGGATTaGTCACTCTTTGGGCCAGCTGGCATCTTTTGTCAGAGGTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: TLPEFLRGFLAFPLD*SLFGPAGIFCQRCE Trigger: TTCACACCTCTGACAAAAGATGCCAGCTGGCCCAAAGAGTGACAAATCCAATGGAAAGGCTAGGAAACCTCTAAGGAACTCTGGGAGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR-3UTR GCA 90 bp | GGTGAAGGATTTACAGACAATACAGGAAGCACTCCTAAGCCTGTTTCCAGAGCTAACCCACAATGTAGGTaGTGGGAACCAAACCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: GEGFTDNTGSTPKPVSRANPQCR*WEPNLG Trigger: TCCCAGGTTTGGTTCCCAGCACCTACATTGTGGGTT...AGCTCTGGAAACAGGCTTAGGAGTGCTTCCTGTATTGTCTGTAAATCCTTCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR-3UTR CCA 90 bp | ACACAGAAGGAAGAAGAGCTTCCCGGCTATGGGCAAACACTGCCACTTCCCTATCCTGAAAAACCTGGTTaGAATTCAAGTGGAAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: TQKEEELPGYGQTLPLPYPEKPG*NSSGKV Trigger: TACTTTTCCACTTGAATTCCAACCAGGTTTTTCAGG...ATAGGGAAGTGGCAGTGTTTGCCCATAGCCGGGAAGCTCTTCTTCCTTCTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR-3UTR CCA 90 bp | CCAATGCCTTTGAGGAGGCAGAGGAGTTACCAGCATGTTGCAATACATCCAGGATGGTTGGAATTCAAGTaGAAAAGTATGGTTGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: PMPLRRQRSYQHVAIHPGWLEFK*KSMVVP Trigger: TGGAACAACCATACTTTTCCACTTGAATTCCAACCA...TCCTGGATGTATTGCAACATGCTGGTAACTCCTCTGCCTCCTCAAAGGCATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR-3UTR TCA 90 bp | GGTGAAGGATTTACAGACAATACAGGAAGCACTCCTAAGCCTGTTTCCAGAGCTAGCAAAGATACTAACTaGAATCACATAATTGCCTCG | + |
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Preference number: 2 (lower is better) Translates to: GEGFTDNTGSTPKPVSRASKDTN*NHIIAS Trigger: CGAGGCAATTATGTGATTTCAGTTAGTATCTTTGCT...AGCTCTGGAAACAGGCTTAGGAGTGCTTCCTGTATTGTCTGTAAATCCTTCACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR TCA 72 bp | GTCCAAGTGTGTAGAAACTGCTCCACAGAGCAGCTCTaGAGGTGGCTGGCGTCCTCTTTCCTTCCCGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: VQVCRNCSTEQL*RWLASSFLPGC Trigger: ACAGCCGGGAAGGAAAGAGGACGCCAGCCACCTTCAGAGCTGCTCTGTGGAGCAGTTTCTACACACTTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
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| 3UTR TCA 72 bp | CGTGGACAAGGCTTGGCTTGTTCAACTGATGGCTACTaGCAGCTGAGGCCCCTCTGTGCCAAGGTAGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: RGQGLACSTDGY*QLRPLCAKVAV Trigger: CACAGCTACCTTGGCACAGAGGGGCCTCAGCTGTCAGTAGCCATCAGTTGAACAAGCCAAGCCTTGTCCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR-3UTR CAA 90 bp | TGGCTGAAGGTAGCCAGTTCCAAGCCTCGGCTGAGCCTCCTACACAGAAGCAGGGCCTTTCCATTGGATTaGTCACTCTTTGGGCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: WLKVASSKPRLSLLHRSRAFPLD*SLFGPA Trigger: AGCTGGCCCAAAGAGTGACAAATCCAATGGAAAGGC...CCTGCTTCTGTGTAGGAGGCTCAGCCGAGGCTTGGAACTGGCTACCTTCAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR TCA 72 bp | GCCAAAGAAAAGCTTAGCGGAGAACAGGAGTGGTGGTaGACAGGCCTCTGCCATCTGATCTGGGCCAGTAGC | + |
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Preference number: 3 (lower is better) Translates to: AKEKLSGEQEWW*TGLCHLIWASS Trigger: GCTACTGGCCCAGATCAGATGGCAGAGGCCTGTTCACCACCACTCCTGTTCTCCGCTAAGCTTTTCTTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR TCA 72 bp | GAATGGTCCACGTGGACAAGGCTTGGCTTGTTCAACTaGTGGCTACTGACAGCTGAGGCCCCTCTGTGCCAA | + |
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Preference number: 3 (lower is better) Translates to: EWSTWTRLGLFN*WLLTAEAPLCQ Trigger: TTGGCACAGAGGGGCCTCAGCTGTCAGTAGCCATCAGTTGAACAAGCCAAGCCTTGTCCACGTGGACCATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR GCA 72 bp | AGGGTAGAAGGGTTGCTATACAGCAGGGGAAAAGACTaGTGGCTGAAGGTAGCCAGTTCCAAGCCTCGGCTG | + |
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Preference number: 3 (lower is better) Translates to: RVEGLLYSRGKD*WLKVASSKPRL Trigger: CAGCCGAGGCTTGGAACTGGCTACCTTCAGCCAGCAGTCTTTTCCCCTGCTGTATAGCAACCCTTCTACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR CCA 72 bp | GTAGAAGGGTTGCTATACAGCAGGGGAAAAGACTGCTaGCTGAAGGTAGCCAGTTCCAAGCCTCGGCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: VEGLLYSRGKDC*LKVASSKPRLS Trigger: GCTCAGCCGAGGCTTGGAACTGGCTACCTTCAGCCAGCAGTCTTTTCCCCTGCTGTATAGCAACCCTTCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR GCA 72 bp | AGAAGGAAGAAGAGCTTCCCGGCTATGGGCAAACACTaGCACTTCCCTATTCAAAGCTGGGGAGCTGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: RRKKSFPAMGKH*HFPIQSWGAEP Trigger: TGGCTCAGCTCCCCAGCTTTGAATAGGGAAGTGGCAGTGTTTGCCCATAGCCGGGAAGCTCTTCTTCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR-3UTR CAA 90 bp | TGGCTGAAGGTAGCCAGTTCCAAGCCTCGGCTGAGCCTCCTACACAGAAGCAGGTTCCTAGCCTTTCCATaGGATTTGTCACTCTTTGGG | + |
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Preference number: 3 (lower is better) Translates to: WLKVASSKPRLSLLHRSRFLAFP*DLSLFG Trigger: CCCAAAGAGTGACAAATCCAATGGAAAGGCTAGGAA...CCTGCTTCTGTGTAGGAGGCTCAGCCGAGGCTTGGAACTGGCTACCTTCAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR TCA 72 bp | GTAAAGATACCAAACGCGCCTCCCAAGACAAACCCCTaGCTGTTAACCCCAGGGTCAAGAGAGACATCTCCG | + |
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Preference number: 3 (lower is better) Translates to: VKIPNAPPKTNP*LLTPGSRETSP Trigger: CGGAGATGTCTCTCTTGACCCTGGGGTTAACAGTCAGGGGTTTGTCTTGGGAGGCGCGTTTGGTATCTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164102.2 |
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| 3UTR TCA 72 bp | CAAACACTGCCACTTCCCTATTCAAAGCTGGGGAGCTaGGCCAGGTCAGAACTGAGCCTGGTTCAAAGCTTA | + |
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Preference number: 3 (lower is better) Translates to: QTLPLPYSKLGS*ARSELSLVQSL Trigger: TAAGCTTTGAACCAGGCTCAGTTCTGACCTGGCTCAGCTCCCCAGCTTTGAATAGGGAAGTGGCAGTGTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR CCA 72 bp | TACTTGCACACAGAAGGAAGAAGAGCTTCCCGGCTATaGGCAAACACTGCCACTTCCCTATTCAAAGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: YLHTEGRRASRL*ANTATSLFKAG Trigger: CCCAGCTTTGAATAGGGAAGTGGCAGTGTTTGCCCATAGCCGGGAAGCTCTTCTTCCTTCTGTGTGCAAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR-3UTR CAA 90 bp | GACAAACCCCTGACTGTTAACCCCAGGGTCAAGAGAGACATCTCCGGGTTCAAGCCTAAACGCGTTGTCTaGATAAGGAATCCTAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: DKPLTVNPRVKRDISGFKPKRVV*IRNPKA Trigger: AGCCTTAGGATTCCTTATCAAGACAACGCGTTTAGG...CTTGAACCCGGAGATGTCTCTCTTGACCCTGGGGTTAACAGTCAGGGGTTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164102.2 |
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| 3UTR TCA 72 bp | AGCTGTAGGCATGACCATCAGCCAATCCAATGCCTTTaGGGAGGCAGAGGAGTTACCAGCATGTTGCAATAC | + |
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Preference number: 3 (lower is better) Translates to: SCRHDHQPIQCL*GGRGVTSMLQY Trigger: GTATTGCAACATGCTGGTAACTCCTCTGCCTCCTCAAAGGCATTGGATTGGCTGATGGTCATGCCTACAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR GCA 72 bp | GGAATTCAAGTGGAAAAGTATGGTTGTTCCAATGGCTaGAGAGAGCGATCGAGCAGCGAGGTGTGTCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: GIQVEKYGCSNG*RERSSSEVCPS Trigger: TGAAGGACACACCTCGCTGCTCGATCGCTCTCTGCAGCCATTGGAACAACCATACTTTTCCACTTGAATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
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| 3UTR-3UTR CAA 90 bp | ACACAGAAGGAAGAAGAGCTTCCCGGCTATGGGCAAACACTGCCACTTCCCTATAGTGGAAAAGTATGGTaGTTCCAATGGCTGCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: TQKEEELPGYGQTLPLPYSGKVW*FQWLQR Trigger: TCTCTGCAGCCATTGGAACAACCATACTTTTCCACT...ATAGGGAAGTGGCAGTGTTTGCCCATAGCCGGGAAGCTCTTCTTCCTTCTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR TCA 72 bp | CAAAGCTTAATGCGTAACAGTCCACACACTGCCTCCTaGTCTGTTTACTGCAAGGAGACACTCTGCCATACC | + |
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Preference number: 3 (lower is better) Translates to: QSLMRNSPHTAS*SVYCKETLCHT Trigger: GGTATGGCAGAGTGTCTCCTTGCAGTAAACAGATCAGGAGGCAGTGTGTGGACTGTTACGCATTAAGCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR TCA 72 bp | AGGAACATGGCTAAACTTTCTAGGGAGAGGCCTTGCTaGTGGAGTGGCTGTGGTAACAAAGATACAGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: RNMAKLSRERPC*WSGCGNKDTAS Trigger: GGAAGCTGTATCTTTGTTACCACAGCCACTCCATCAGCAAGGCCTCTCCCTAGAAAGTTTAGCCATGTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR CCA 72 bp | CCTGAAAAACCTGGTTGGAATTCAAGTGGAAAAGTATaGTTGTTCCAATGGCTGCAGAGAGCGATCGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: PEKPGWNSSGKV*LFQWLQRAIEQ Trigger: CTGCTCGATCGCTCTCTGCAGCCATTGGAACAACCATACTTTTCCACTTGAATTCCAACCAGGTTTTTCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR GCA 72 bp | ACTAGAGTTACAGATGGTTGTAACCCACAATGTAGGTaGTGGGAACCAAACCTGGGACCTCTGGTATTAACT | + |
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Preference number: 3 (lower is better) Translates to: TRVTDGCNPQCR*WEPNLGPLVLT Trigger: AGTTAATACCAGAGGTCCCAGGTTTGGTTCCCAGCACCTACATTGTGGGTTACAACCATCTGTAACTCTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR TCA 72 bp | CTGGGAACCAAACCTGGGACCTCTGGTATTAACTACTaGGCCTTCTCACAGCCCCCATATACATATATTTTT | + |
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Preference number: 3 (lower is better) Translates to: LGTKPGTSGINY*AFSQPPYTYIF Trigger: AAAAATATATGTATATGGGGGCTGTGAGAAGGCTCAGTAGTTAATACCAGAGGTCCCAGGTTTGGTTCCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| 3UTR GCA 72 bp | AAATCACATAATTGCCTCGATGGCATAAGTTTACTTTaGCCTGCCCTGGGACTCATGATGGATACTTGCACA | + |
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Preference number: 3 (lower is better) Translates to: KSHNCLDGISLL*PALGLMMDTCT Trigger: TGTGCAAGTATCCATCATGAGTCCCAGGGCAGGGCAAAGTAAACTTATGCCATCGAGGCAATTATGTGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| CDS-3UTR TCA 90 bp | CTGTTAACCCCAGGGTCAAGAGAGACATCTCCGGGTTCAAGGAGCAAGTCCGGGCGCTGCCTCAGGAGCTaGACCCCCGGCCTTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: LLTPGSRETSPGSRSKSGRCLRS*TPGLGG Trigger: GCCCCCAAGGCCGGGGGTTCAGCTCCTGAGGCAGCG...CCCGGACTTGCTCCTTGAACCCGGAGATGTCTCTCTTGACCCTGGGGTTAACAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000164102.2 |
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| CDS-3UTR GCA 90 bp | CTGTTAACCCCAGGGTCAAGAGAGACATCTCCGGGTTCAAGGAGCAAGTCCGGGGGATCCCGCCCAGGCTaGCAGGCTCCAGAAGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: LLTPGSRETSPGSRSKSGGSRPG*QAPEAG Trigger: CCCGGCTTCTGGAGCCTGGCAGCCTGGGCGGGATCC...CCCGGACTTGCTCCTTGAACCCGGAGATGTCTCTCTTGACCCTGGGGTTAACAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164102.2 |
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| CDS-3UTR TCA 90 bp | AGGGATGCACTTGGCTTCACCCCTGAAGCAGTCCAAGTGTGTAGAAACTGCTCCCGCTGCCTCAGGAGCTaGACCCCCGGCCTTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: RDALGFTPEAVQVCRNCSRCLRS*TPGLGG Trigger: GCCCCCAAGGCCGGGGGTTCAGCTCCTGAGGCAGCG...GGAGCAGTTTCTACACACTTGGACTGCTTCAGGGGTGAAGCCAAGTGCATCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| CDS-3UTR TCA 90 bp | GCCTCCCAAGACAAACCCCTGACTGTTAACCCCAGGGTCAAGAGAGACATCTCCTCGCCCACCAGGTACTaGAGAAGAAGGCTGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASQDKPLTVNPRVKRDISSPTRY*RRRLYC Trigger: GCAGTACAGCCTTCTTCTTCAGTACCTGGTGGGCGA...GGAGATGTCTCTCTTGACCCTGGGGTTAACAGTCAGGGGTTTGTCTTGGGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164102.2 |
||
| CDS-3UTR GCA 90 bp | AACCTGGTTGGAATTCAAGTGGAAAAGTATGGTTGTTCCAATGGCTGCAGAGAGGGATCCCGCCCAGGCTaGCAGGCTCCAGAAGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLVGIQVEKYGCSNGCREGSRPG*QAPEAG Trigger: CCCGGCTTCTGGAGCCTGGCAGCCTGGGCGGGATCC...CTCTCTGCAGCCATTGGAACAACCATACTTTTCCACTTGAATTCCAACCAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
||
| CDS-3UTR CCA 90 bp | TTGGCTTCACCCCTGAAGCAGTCCAAGTGTGTAGAAACTGCTCCACAGAGCAGCACCCTCCACAACCTATaGCCCCGGCCTTTACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LASPLKQSKCVETAPQSSTLHNL*PRPLLQ Trigger: CTGGAGTAAAGGCCGGGGCCATAGGTTGTGGAGGGT...GCTGCTCTGTGGAGCAGTTTCTACACACTTGGACTGCTTCAGGGGTGAAGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
||
| CDS-3UTR GCA 90 bp | CTGTTAACCCCAGGGTCAAGAGAGACATCTCCGGGTTCAAGGAGCAAGTCCGGGAGAAGAAGGCTGTACTaGAACGGAGCTTCGGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLTPGSRETSPGSRSKSGRRRLY*NGASAE Trigger: TTCTGCCGAAGCTCCGTTGCAGTACAGCCTTCTTCT...CCCGGACTTGCTCCTTGAACCCGGAGATGTCTCTCTTGACCCTGGGGTTAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164102.2 |
||
| CDS-3UTR CCA 90 bp | CTCCACAGAGCAGCTCTGAAGGTGGCTGGCGTCCTCTTTCCTTCCCGGCTGTTTACATGGCGCCCACAATaGCAAAGTTTTTGGCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LHRAALKVAGVLFPSRLFTWRPQ*QSFWHR Trigger: CCTATGCCAAAAACTTTGCCATTGTGGGCGCCATGT...AAACAGCCGGGAAGGAAAGAGGACGCCAGCCACCTTCAGAGCTGCTCTGTGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
||
| CDS-3UTR TCA 90 bp | TACTTGCACACAGAAGGAAGAAGAGCTTCCCGGCTATGGGCAAACACTGCCACTTCGCCCACCAGGTACTaGAGAAGAAGGCTGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: YLHTEGRRASRLWANTATSPTRY*RRRLYC Trigger: GCAGTACAGCCTTCTTCTTCAGTACCTGGTGGGCGA...AGTGGCAGTGTTTGCCCATAGCCGGGAAGCTCTTCTTCCTTCTGTGTGCAAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
||
| CDS-3UTR CCA 90 bp | CCTGATCTGTTTACTGCAAGGAGACACTCTGCCATACCACCTCCCCTGAAAAACACCCTCCACAACCTATaGCCCCGGCCTTTACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PDLFTARRHSAIPPPLKNTLHNL*PRPLLQ Trigger: CTGGAGTAAAGGCCGGGGCCATAGGTTGTGGAGGGT...GTTTTTCAGGGGAGGTGGTATGGCAGAGTGTCTCCTTGCAGTAAACAGATCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
||
| 3UTR CAA 72 bp | GACCACAGTAAGACATTCACGGACCTTTCACCTGGGTaGGGGCCCAAGACCAAGGGTTTTGTAAGCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: DHSKTFTDLSPG*GPKTKGFVSCR Trigger: CCTACAGCTTACAAAACCCTTGGTCTTGGGCCCCAACCCAGGTGAAAGGTCCGTGAATGTCTTACTGTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
||
| CDS-3UTR GCA 90 bp | CCCCTGAAGCAGTCCAAGTGTGTAGAAACTGCTCCACAGAGCAGCTCTGAAGGTAGAAGAAGGCTGTACTaGAACGGAGCTTCGGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLKQSKCVETAPQSSSEGRRRLY*NGASAE Trigger: TTCTGCCGAAGCTCCGTTGCAGTACAGCCTTCTTCT...ACCTTCAGAGCTGCTCTGTGGAGCAGTTTCTACACACTTGGACTGCTTCAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
||
| CDS-3UTR GCA 90 bp | TCACCCCTGAAGCAGTCCAAGTGTGTAGAAACTGCTCCACAGAGCAGCTCTGAACTCTCGATCATCTTCTaGTCCTCGCTCTTGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPLKQSKCVETAPQSSSELSIIF*SSLLAG Trigger: TCCTGCCAAGAGCGAGGAGCAGAAGATGATCGAGAG...TTCAGAGCTGCTCTGTGGAGCAGTTTCTACACACTTGGACTGCTTCAGGGGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
||
| CDS-3UTR CCA 90 bp | GGGATGCACTTGGCTTCACCCCTGAAGCAGTCCAAGTGTGTAGAAACTGCTCCAGACTTCTTTTGCAGTTaGTGTCCGGTAAGGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GMHLASPLKQSKCVETAPDFFCS*CPVRVL Trigger: AAGGACCCTTACCGGACACCAACTGCAAAAGAAGTC...TGGAGCAGTTTCTACACACTTGGACTGCTTCAGGGGTGAAGCCAAGTGCATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCTTCACCCCTGAAGCAGTCCAAGTGTGTAGAAACTGCTCCACAGAGCAGCACATGGCGCCCACAATaGCAAAGTTTTTGGCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LASPLKQSKCVETAPQSSTWRPQ*QSFWHR Trigger: CCTATGCCAAAAACTTTGCCATTGTGGGCGCCATGT...GCTGCTCTGTGGAGCAGTTTCTACACACTTGGACTGCTTCAGGGGTGAAGCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
||
| 3UTR CAA 72 bp | TTTACTTTGCCCTGCCCTGGGACTCATGATGGATACTaGCACACAGAAGGAAGAAGAGCTTCCCGGCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: FTLPCPGTHDGY*HTEGRRASRLW Trigger: CCATAGCCGGGAAGCTCTTCTTCCTTCTGTGTGCAAGTATCCATCATGAGTCCCAGGGCAGGGCAAAGTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
||
| CDS-3UTR CCA 90 bp | GATGCACTTGGCTTCACCCCTGAAGCAGTCCAAGTGTGTAGAAACTGCTCCACAGACTTCTTTTGCAGTTaGTGTCCGGTAAGGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DALGFTPEAVQVCRNCSTDFFCS*CPVRVL Trigger: AAGGACCCTTACCGGACACCAACTGCAAAAGAAGTC...TGTGGAGCAGTTTCTACACACTTGGACTGCTTCAGGGGTGAAGCCAAGTGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
||
| CDS-3UTR CCA 90 bp | TCACCCCTGAAGCAGTCCAAGTGTGTAGAAACTGCTCCACAGAGCAGCTCTGAACAGTACATGAAAACATaGCGCCCACAATGGCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPLKQSKCVETAPQSSSEQYMKT*RPQWQS Trigger: ACTTTGCCATTGTGGGCGCCATGTTTTCATGTACTG...TTCAGAGCTGCTCTGTGGAGCAGTTTCTACACACTTGGACTGCTTCAGGGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
||
| 3UTR CAA 72 bp | CTCCCAGAGTTCCTTAGAGGTTTCCTAGCCTTTCCATaGGATTTGTCACTCTTTGGGCCAGCTGGCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPEFLRGFLAFP*DLSLFGPAGIF Trigger: AAAGATGCCAGCTGGCCCAAAGAGTGACAAATCCAATGGAAAGGCTAGGAAACCTCTAAGGAACTCTGGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
||
| 3UTR CAA 72 bp | GAAAAACCTGGTTGGAATTCAAGTGGAAAAGTATGGTaGTTCCAATGGCTGCAGAGAGCGATCGAGCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: EKPGWNSSGKVW*FQWLQRAIEQR Trigger: TCGCTGCTCGATCGCTCTCTGCAGCCATTGGAACAACCATACTTTTCCACTTGAATTCCAACCAGGTTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
||
| 3UTR CAA 72 bp | GAGTTCCTTAGAGGTTTCCTAGCCTTTCCATTGGATTaGTCACTCTTTGGGCCAGCTGGCATCTTTTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EFLRGFLAFPLD*SLFGPAGIFCQ Trigger: CTGACAAAAGATGCCAGCTGGCCCAAAGAGTGACAAATCCAATGGAAAGGCTAGGAAACCTCTAAGGAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
||
| 3UTR CAA 72 bp | CCCAGCCATCTAAAACAGGAAGCTATTCATCTCCTTTaGATTGAATGGTCCACGTGGACAAGGCTTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PSHLKQEAIHLL*IEWSTWTRLGL Trigger: CAAGCCAAGCCTTGTCCACGTGGACCATTCAATCAAAAGGAGATGAATAGCTTCCTGTTTTAGATGGCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
||
| CDS-3UTR TCA 90 bp | AACCTGGTTGGAATTCAAGTGGAAAAGTATGGTTGTTCCAATGGCTGCAGAGAGCAGACACTCAGTACATaGAAACATGGCGCCCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: NLVGIQVEKYGCSNGCREQTLST*KHGAHN Trigger: ATTGTGGGCGCCATGTTTTCATGTACTGAGTGTCTG...CTCTCTGCAGCCATTGGAACAACCATACTTTTCCACTTGAATTCCAACCAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
||
| CDS GCA 90 bp | TCTTCTGCTCCTCGCTCTTGGCAGGACTCGGGATCCCGCCCAGGCTaGCAGGCTCCAGAAGCCGGGGCTGACGCTTGTCGCCCACCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSAPRSWQDSGSRPG*QAPEAGADACRPPG Trigger: ACCTGGTGGGCGACAAGCGTCAGCCCCGGCTTCTGGAGCCTGGCAGCCTGGGCGGGATCCCGAGTCCTGCCAAGAGCGAGGAGCAGAAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021203.7 ENSMUST00000152183.2 ENSMUST00000164102.2 |
||
| CDS CCA 90 bp | CGCAACTTTCCATTGCCCTCTCGATCATCTTCTGCTCCTCGCTCTTaGCAGGACTCGGGATCCCGCCCAGGCTGCCAGGCTCCAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RNFPLPSRSSSAPRS*QDSGSRPGCQAPEA Trigger: GGCTTCTGGAGCCTGGCAGCCTGGGCGGGATCCCGAGTCCTGCCAAGAGCGAGGAGCAGAAGATGATCGAGAGGGCAATGGAAAGTTGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021203.7 ENSMUST00000152183.2 ENSMUST00000164102.2 |
||
| CDS GCA 90 bp | ACAGCCTTGAAGGCGCAACTTTCCATTGCCCTCTCGATCATCTTCTaGTCCTCGCTCTTGGCAGGACTCGGGATCCCGCCCAGGCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TALKAQLSIALSIIF*SSLLAGLGIPPRLP Trigger: TGGCAGCCTGGGCGGGATCCCGAGTCCTGCCAAGAGCGAGGAGCAGAAGATGATCGAGAGGGCAATGGAAAGTTGCGCCTTCAAGGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021203.7 ENSMUST00000152183.2 ENSMUST00000164102.2 |
||
| CDS TCA 90 bp | GCCCCTCGAGCCTCGTCTCACCTCCTACACAGGCCAGCACAGCCTTaGAGGCGCAACTTTCCATTGCCCTCTCGATCATCTTCTGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: APRASSHLLHRPAQP*RRNFPLPSRSSSAP Trigger: AGGAGCAGAAGATGATCGAGAGGGCAATGGAAAGTTGCGCCTTCAAGGCTGTGCTGGCCTGTGTAGGAGGTGAGACGAGGCTCGAGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164102.2 |
||
| CDS GCA 90 bp | CCCTCCTACACAGGCCAGCACAGCCTTGAAGGCGCAACTTTCCATTaGCCTCTCGATCATCTTCTGCTCCTCGCTCTTGGCAGGACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PSYTGQHSLEGATFH*PLDHLLLLALGRTR Trigger: CCGAGTCCTGCCAAGAGCGAGGAGCAGAAGATGATCGAGAGGGCAATGGAAAGTTGCGCCTTCAAGGCTGTGCTGGCCTGTGTAGGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
||
| CDS-3UTR CAA 90 bp | GCCTCCCAAGACAAACCCCTGACTGTTAACCCCAGGGTCAAGAGAGACATCTCCTTCTGCTCCTCGCTCTaGGCAGGACTCGGGATCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ASQDKPLTVNPRVKRDISFCSSL*AGLGIP Trigger: CGGGATCCCGAGTCCTGCCAAGAGCGAGGAGCAGAA...GGAGATGTCTCTCTTGACCCTGGGGTTAACAGTCAGGGGTTTGTCTTGGGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164102.2 |
||
| CDS GCA 90 bp | ACCTCCTACACAGGCCAGCACAGCCTTGAAGGCGCAACTTTCCATTaGCCTCTCGATCATCTTCTGCTCCTCGCTCTTGGCAGGACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: TSYTGQHSLEGATFH*PLDHLLLLALGRTR Trigger: CCGAGTCCTGCCAAGAGCGAGGAGCAGAAGATGATCGAGAGGGCAATGGAAAGTTGCGCCTTCAAGGCTGTGCTGGCCTGTGTAGGAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164102.2 |
||
| CDS-3UTR CAA 90 bp | GCACTTGGCTTCACCCCTGAAGCAGTCCAAGTGTGTAGAAACTGCTCCACAGAGTTCTGCTCCTCGCTCTaGGCAGGACTCGGGATCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ALGFTPEAVQVCRNCSTEFCSSL*AGLGIP Trigger: CGGGATCCCGAGTCCTGCCAAGAGCGAGGAGCAGAA...CTCTGTGGAGCAGTTTCTACACACTTGGACTGCTTCAGGGGTGAAGCCAAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
||
| CDS TCA 90 bp | ACGCGCCTCCCAAGACAAACCCTCCTACACAGGCCAGCACAGCCTTaGAGGCGCAACTTTCCATTGCCCTCTCGATCATCTTCTGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TRLPRQTLLHRPAQP*RRNFPLPSRSSSAP Trigger: AGGAGCAGAAGATGATCGAGAGGGCAATGGAAAGTTGCGCCTTCAAGGCTGTGCTGGCCTGTGTAGGAGGGTTTGTCTTGGGAGGCGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
||
| CDS TCA 90 bp | CCAGTCCGACTTTCCCCGGTACTCCTACACAGGCCAGCACAGCCTTaGAGGCGCAACTTTCCATTGCCCTCTCGATCATCTTCTGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PVRLSPVLLHRPAQP*RRNFPLPSRSSSAP Trigger: AGGAGCAGAAGATGATCGAGAGGGCAATGGAAAGTTGCGCCTTCAAGGCTGTGCTGGCCTGTGTAGGAGTACCGGGGAAAGTCGGACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152183.2 |
||
| CDS GCA 90 bp | TACTCCTACACAGGCCAGCACAGCCTTGAAGGCGCAACTTTCCATTaGCCTCTCGATCATCTTCTGCTCCTCGCTCTTGGCAGGACTCGG | + |
|
Preference number: 5 (lower is better) Translates to: YSYTGQHSLEGATFH*PLDHLLLLALGRTR Trigger: CCGAGTCCTGCCAAGAGCGAGGAGCAGAAGATGATCGAGAGGGCAATGGAAAGTTGCGCCTTCAAGGCTGTGCTGGCCTGTGTAGGAGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152183.2 |
||
| CDS-3UTR CAA 90 bp | CTGTTAACCCCAGGGTCAAGAGAGACATCTCCGGGTTCAAGGAGCAAGTCCGGGAGGCGCAACTTTCCATaGCCCTCTCGATCATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLTPGSRETSPGSRSKSGRRNFP*PSRSSS Trigger: AGAAGATGATCGAGAGGGCAATGGAAAGTTGCGCCT...CCCGGACTTGCTCCTTGAACCCGGAGATGTCTCTCTTGACCCTGGGGTTAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164102.2 |
||
| CDS-3UTR CAA 90 bp | AGGGATGCACTTGGCTTCACCCCTGAAGCAGTCCAAGTGTGTAGAAACTGCTCCGGACTTCTTTTGCAGTaGGTGTCCGGTAAGGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RDALGFTPEAVQVCRNCSGLLLQ*VSGKGP Trigger: AGGACCCTTACCGGACACCAACTGCAAAAGAAGTCC...GGAGCAGTTTCTACACACTTGGACTGCTTCAGGGGTGAAGCCAAGTGCATCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
||
| CDS-3UTR CAA 90 bp | TTGGCTTCACCCCTGAAGCAGTCCAAGTGTGTAGAAACTGCTCCACAGAGCAGCAGGCGCAACTTTCCATaGCCCTCTCGATCATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LASPLKQSKCVETAPQSSRRNFP*PSRSSS Trigger: AGAAGATGATCGAGAGGGCAATGGAAAGTTGCGCCT...GCTGCTCTGTGGAGCAGTTTCTACACACTTGGACTGCTTCAGGGGTGAAGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
||
| CDS-3UTR CAA 90 bp | CCTGATCTGTTTACTGCAAGGAGACACTCTGCCATACCACCTCCCCTGAAAAACTCCGGTAAGGGTCCTTaGGGTCAAAGCCTACGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PDLFTARRHSAIPPPLKNSGKGP*GQSLRW Trigger: CCAACGTAGGCTTTGACCCAAAGGACCCTTACCGGA...GTTTTTCAGGGGAGGTGGTATGGCAGAGTGTCTCCTTGCAGTAAACAGATCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
||
| CDS-3UTR CAA 90 bp | GATGCACTTGGCTTCACCCCTGAAGCAGTCCAAGTGTGTAGAAACTGCTCCACAGGACTTCTTTTGCAGTaGGTGTCCGGTAAGGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: DALGFTPEAVQVCRNCSTGLLLQ*VSGKGP Trigger: AGGACCCTTACCGGACACCAACTGCAAAAGAAGTCC...TGTGGAGCAGTTTCTACACACTTGGACTGCTTCAGGGGTGAAGCCAAGTGCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
||
| CDS-3UTR CAA 90 bp | ATGCACTTGGCTTCACCCCTGAAGCAGTCCAAGTGTGTAGAAACTGCTCCACAGGGGTCAAAGCCTACGTaGGTATCAATGCCAGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: MHLASPLKQSKCVETAPQGSKPT*VSMPAV Trigger: TACTGCTGGCATTGATACCAACGTAGGCTTTGACCC...CTGTGGAGCAGTTTCTACACACTTGGACTGCTTCAGGGGTGAAGCCAAGTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
||
| CDS GCA 90 bp | GGCATAGGACATTCCTCTCTGTCCCATGTCTTTCAGGACTTCTTTTaGAGTTGGTGTCCGGTAAGGGTCCTTTGGGTCAAAGCCTACGTT | + |
|
Preference number: 5 (lower is better) Translates to: GIGHSSLSHVFQDFF*SWCPVRVLWVKAYV Trigger: AACGTAGGCTTTGACCCAAAGGACCCTTACCGGACACCAACTGCAAAAGAAGTCCTGAAAGACATGGGACAGAGAGGAATGTCCTATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
||
| CDS CCA 90 bp | GGACATTCCTCTCTGTCCCATGTCTTTCAGGACTTCTTTTGCAGTTaGTGTCCGGTAAGGGTCCTTTGGGTCAAAGCCTACGTTGGTATC | + |
|
Preference number: 5 (lower is better) Translates to: GHSSLSHVFQDFFCS*CPVRVLWVKAYVGI Trigger: GATACCAACGTAGGCTTTGACCCAAAGGACCCTTACCGGACACCAACTGCAAAAGAAGTCCTGAAAGACATGGGACAGAGAGGAATGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
||
| CDS TCA 90 bp | CCAGTCCGACTTTCCCCGGTAAGACTCTACCAGACACTCAGTACATaGAAACATGGCGCCCACAATGGCAAAGTTTTTGGCATAGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: PVRLSPVRLYQTLST*KHGAHNGKVFGIGH Trigger: ATGTCCTATGCCAAAAACTTTGCCATTGTGGGCGCCATGTTTTCATGTACTGAGTGTCTGGTAGAGTCTTACCGGGGAAAGTCGGACTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
||
| CDS-3UTR CAA 90 bp | TTGGCTTCACCCCTGAAGCAGTCCAAGTGTGTAGAAACTGCTCCACAGAGCAGCGTAGGTAATAATCGATaGCAGCAGAGAAAGCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LASPLKQSKCVETAPQSSVGNNR*QQRKQQ Trigger: TTGCTGCTTTCTCTGCTGCAATCGATTATTACCTAC...GCTGCTCTGTGGAGCAGTTTCTACACACTTGGACTGCTTCAGGGGTGAAGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
||
| CDS CCA 90 bp | GTCTTTCAGGACTTCTTTTGCAGTTGGTGTCCGGTAAGGGTCCTTTaGGTCAAAGCCTACGTTGGTATCAATGCCAGCAGTAAAGATACC | + |
|
Preference number: 5 (lower is better) Translates to: VFQDFFCSWCPVRVL*VKAYVGINASSKDT Trigger: GGTATCTTTACTGCTGGCATTGATACCAACGTAGGCTTTGACCCAAAGGACCCTTACCGGACACCAACTGCAAAAGAAGTCCTGAAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
||
| CDS-3UTR CAA 90 bp | AAAACCTGGTTGGAATTCAAGTGGAAAAGTATGGTTGTTCCAATGGCTGCAGAGTCCGGTAAGGGTCCTTaGGGTCAAAGCCTACGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KTWLEFKWKSMVVPMAAESGKGP*GQSLRW Trigger: CCAACGTAGGCTTTGACCCAAAGGACCCTTACCGGA...CTCTGCAGCCATTGGAACAACCATACTTTTCCACTTGAATTCCAACCAGGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
||
| CDS-3UTR CAA 90 bp | GATGCACTTGGCTTCACCCCTGAAGCAGTCCAAGTGTGTAGAAACTGCTCCACAGTAGGTAATAATCGATaGCAGCAGAGAAAGCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: DALGFTPEAVQVCRNCSTVGNNR*QQRKQQ Trigger: TTGCTGCTTTCTCTGCTGCAATCGATTATTACCTAC...TGTGGAGCAGTTTCTACACACTTGGACTGCTTCAGGGGTGAAGCCAAGTGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
||
| CDS CCA 90 bp | GACACTCAGTACATGAAAACATGGCGCCCACAATGGCAAAGTTTTTaGCATAGGACATTCCTCTCTGTCCCATGTCTTTCAGGACTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: DTQYMKTWRPQWQSF*HRTFLSVPCLSGLL Trigger: AAGAAGTCCTGAAAGACATGGGACAGAGAGGAATGTCCTATGCCAAAAACTTTGCCATTGTGGGCGCCATGTTTTCATGTACTGAGTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
||
| CDS CCA 90 bp | AAGACTCTACCAGACACTCAGTACATGAAAACATGGCGCCCACAATaGCAAAGTTTTTGGCATAGGACATTCCTCTCTGTCCCATGTCTT | + |
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Preference number: 5 (lower is better) Translates to: KTLPDTQYMKTWRPQ*QSFWHRTFLSVPCL Trigger: AAGACATGGGACAGAGAGGAATGTCCTATGCCAAAAACTTTGCCATTGTGGGCGCCATGTTTTCATGTACTGAGTGTCTGGTAGAGTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
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| CDS GCA 72 bp | CCTCGCTCTTGGCAGGACTCGGGATCCCGCCCAGGCTaGCAGGCTCCAGAAGCCGGGGCTGACGCTTGTCGC | + |
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Preference number: 6 (lower is better) Translates to: PRSWQDSGSRPG*QAPEAGADACR Trigger: GCGACAAGCGTCAGCCCCGGCTTCTGGAGCCTGGCAGCCTGGGCGGGATCCCGAGTCCTGCCAAGAGCGAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021203.7 ENSMUST00000152183.2 ENSMUST00000164102.2 |
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| CDS CCA 72 bp | CCATTGCCCTCTCGATCATCTTCTGCTCCTCGCTCTTaGCAGGACTCGGGATCCCGCCCAGGCTGCCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: PLPSRSSSAPRS*QDSGSRPGCQA Trigger: AGCCTGGCAGCCTGGGCGGGATCCCGAGTCCTGCCAAGAGCGAGGAGCAGAAGATGATCGAGAGGGCAATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021203.7 ENSMUST00000152183.2 ENSMUST00000164102.2 |
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| CDS CAA 72 bp | TCCATTGCCCTCTCGATCATCTTCTGCTCCTCGCTCTaGGCAGGACTCGGGATCCCGCCCAGGCTGCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SIALSIIFCSSL*AGLGIPPRLPG Trigger: GCCTGGCAGCCTGGGCGGGATCCCGAGTCCTGCCAAGAGCGAGGAGCAGAAGATGATCGAGAGGGCAATGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021203.7 ENSMUST00000152183.2 ENSMUST00000164102.2 |
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| CDS CAA 90 bp | GCGCAACTTTCCATTGCCCTCTCGATCATCTTCTGCTCCTCGCTCTaGGCAGGACTCGGGATCCCGCCCAGGCTGCCAGGCTCCAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: AQLSIALSIIFCSSL*AGLGIPPRLPGSRS Trigger: GCTTCTGGAGCCTGGCAGCCTGGGCGGGATCCCGAGTCCTGCCAAGAGCGAGGAGCAGAAGATGATCGAGAGGGCAATGGAAAGTTGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021203.7 ENSMUST00000152183.2 ENSMUST00000164102.2 |
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| CDS CAA 90 bp | GGCCCCTCGAGCCTCGTCTCACCTCCTACACAGGCCAGCACAGCCTaGAAGGCGCAACTTTCCATTGCCCTCTCGATCATCTTCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: GPSSLVSPPTQASTA*KAQLSIALSIIFCS Trigger: GGAGCAGAAGATGATCGAGAGGGCAATGGAAAGTTGCGCCTTCAAGGCTGTGCTGGCCTGTGTAGGAGGTGAGACGAGGCTCGAGGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164102.2 |
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| CDS GCA 72 bp | AAGGCGCAACTTTCCATTGCCCTCTCGATCATCTTCTaGTCCTCGCTCTTGGCAGGACTCGGGATCCCGCCC | + |
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Preference number: 6 (lower is better) Translates to: KAQLSIALSIIF*SSLLAGLGIPP Trigger: GGGCGGGATCCCGAGTCCTGCCAAGAGCGAGGAGCAGAAGATGATCGAGAGGGCAATGGAAAGTTGCGCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021203.7 ENSMUST00000152183.2 ENSMUST00000164102.2 |
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| CDS CAA 90 bp | AACGCGCCTCCCAAGACAAACCCTCCTACACAGGCCAGCACAGCCTaGAAGGCGCAACTTTCCATTGCCCTCTCGATCATCTTCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: NAPPKTNPPTQASTA*KAQLSIALSIIFCS Trigger: GGAGCAGAAGATGATCGAGAGGGCAATGGAAAGTTGCGCCTTCAAGGCTGTGCTGGCCTGTGTAGGAGGGTTTGTCTTGGGAGGCGCGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| CDS CAA 90 bp | TCCAGTCCGACTTTCCCCGGTACTCCTACACAGGCCAGCACAGCCTaGAAGGCGCAACTTTCCATTGCCCTCTCGATCATCTTCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSPTFPGTPTQASTA*KAQLSIALSIIFCS Trigger: GGAGCAGAAGATGATCGAGAGGGCAATGGAAAGTTGCGCCTTCAAGGCTGTGCTGGCCTGTGTAGGAGTACCGGGGAAAGTCGGACTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152183.2 |
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| CDS TCA 72 bp | GCCTCGTCTCACCTCCTACACAGGCCAGCACAGCCTTaGAGGCGCAACTTTCCATTGCCCTCTCGATCATCT | + |
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Preference number: 6 (lower is better) Translates to: ASSHLLHRPAQP*RRNFPLPSRSS Trigger: AGATGATCGAGAGGGCAATGGAAAGTTGCGCCTTCAAGGCTGTGCTGGCCTGTGTAGGAGGTGAGACGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164102.2 |
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| CDS CAA 72 bp | AGCCTCGTCTCACCTCCTACACAGGCCAGCACAGCCTaGAAGGCGCAACTTTCCATTGCCCTCTCGATCATC | + |
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Preference number: 6 (lower is better) Translates to: SLVSPPTQASTA*KAQLSIALSII Trigger: GATGATCGAGAGGGCAATGGAAAGTTGCGCCTTCAAGGCTGTGCTGGCCTGTGTAGGAGGTGAGACGAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164102.2 |
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| CDS TCA 72 bp | CTTTCCCCGGTACTCCTACACAGGCCAGCACAGCCTTaGAGGCGCAACTTTCCATTGCCCTCTCGATCATCT | + |
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Preference number: 6 (lower is better) Translates to: LSPVLLHRPAQP*RRNFPLPSRSS Trigger: AGATGATCGAGAGGGCAATGGAAAGTTGCGCCTTCAAGGCTGTGCTGGCCTGTGTAGGAGTACCGGGGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152183.2 |
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| CDS CAA 72 bp | CCCAAGACAAACCCTCCTACACAGGCCAGCACAGCCTaGAAGGCGCAACTTTCCATTGCCCTCTCGATCATC | + |
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Preference number: 6 (lower is better) Translates to: PKTNPPTQASTA*KAQLSIALSII Trigger: GATGATCGAGAGGGCAATGGAAAGTTGCGCCTTCAAGGCTGTGCTGGCCTGTGTAGGAGGGTTTGTCTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| CDS CAA 72 bp | ACTTTCCCCGGTACTCCTACACAGGCCAGCACAGCCTaGAAGGCGCAACTTTCCATTGCCCTCTCGATCATC | + |
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Preference number: 6 (lower is better) Translates to: TFPGTPTQASTA*KAQLSIALSII Trigger: GATGATCGAGAGGGCAATGGAAAGTTGCGCCTTCAAGGCTGTGCTGGCCTGTGTAGGAGTACCGGGGAAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152183.2 |
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| CDS TCA 72 bp | CCAAGACAAACCCTCCTACACAGGCCAGCACAGCCTTaGAGGCGCAACTTTCCATTGCCCTCTCGATCATCT | + |
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Preference number: 6 (lower is better) Translates to: PRQTLLHRPAQP*RRNFPLPSRSS Trigger: AGATGATCGAGAGGGCAATGGAAAGTTGCGCCTTCAAGGCTGTGCTGGCCTGTGTAGGAGGGTTTGTCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021203.7 |
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| CDS CAA 72 bp | GGACTTCTTTTGCAGTTGGTGTCCGGTAAGGGTCCTTaGGGTCAAAGCCTACGTTGGTATCAATGCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: GLLLQLVSGKGP*GQSLRWYQCQQ Trigger: CTGCTGGCATTGATACCAACGTAGGCTTTGACCCAAAGGACCCTTACCGGACACCAACTGCAAAAGAAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
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| CDS CAA 90 bp | TGGCATAGGACATTCCTCTCTGTCCCATGTCTTTCAGGACTTCTTTaGCAGTTGGTGTCCGGTAAGGGTCCTTTGGGTCAAAGCCTACGT | + |
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Preference number: 6 (lower is better) Translates to: WHRTFLSVPCLSGLL*QLVSGKGPLGQSLR Trigger: ACGTAGGCTTTGACCCAAAGGACCCTTACCGGACACCAACTGCAAAAGAAGTCCTGAAAGACATGGGACAGAGAGGAATGTCCTATGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
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| CDS CCA 72 bp | GACTTCTTTTGCAGTTGGTGTCCGGTAAGGGTCCTTTaGGTCAAAGCCTACGTTGGTATCAATGCCAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: DFFCSWCPVRVL*VKAYVGINASS Trigger: ACTGCTGGCATTGATACCAACGTAGGCTTTGACCCAAAGGACCCTTACCGGACACCAACTGCAAAAGAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
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| CDS CCA 72 bp | TCTCTGTCCCATGTCTTTCAGGACTTCTTTTGCAGTTaGTGTCCGGTAAGGGTCCTTTGGGTCAAAGCCTAC | + |
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Preference number: 6 (lower is better) Translates to: SLSHVFQDFFCS*CPVRVLWVKAY Trigger: GTAGGCTTTGACCCAAAGGACCCTTACCGGACACCAACTGCAAAAGAAGTCCTGAAAGACATGGGACAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
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| CDS CAA 72 bp | CTCTCTGTCCCATGTCTTTCAGGACTTCTTTTGCAGTaGGTGTCCGGTAAGGGTCCTTTGGGTCAAAGCCTA | + |
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Preference number: 6 (lower is better) Translates to: LSVPCLSGLLLQ*VSGKGPLGQSL Trigger: TAGGCTTTGACCCAAAGGACCCTTACCGGACACCAACTGCAAAAGAAGTCCTGAAAGACATGGGACAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
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| CDS CAA 90 bp | AGGACATTCCTCTCTGTCCCATGTCTTTCAGGACTTCTTTTGCAGTaGGTGTCCGGTAAGGGTCCTTTGGGTCAAAGCCTACGTTGGTAT | + |
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Preference number: 6 (lower is better) Translates to: RTFLSVPCLSGLLLQ*VSGKGPLGQSLRWY Trigger: ATACCAACGTAGGCTTTGACCCAAAGGACCCTTACCGGACACCAACTGCAAAAGAAGTCCTGAAAGACATGGGACAGAGAGGAATGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
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| CDS TCA 72 bp | CTTTCCCCGGTAAGACTCTACCAGACACTCAGTACATaGAAACATGGCGCCCACAATGGCAAAGTTTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: LSPVRLYQTLST*KHGAHNGKVFG Trigger: GCCAAAAACTTTGCCATTGTGGGCGCCATGTTTTCATGTACTGAGTGTCTGGTAGAGTCTTACCGGGGAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
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| CDS GCA 72 bp | CATTCCTCTCTGTCCCATGTCTTTCAGGACTTCTTTTaGAGTTGGTGTCCGGTAAGGGTCCTTTGGGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: HSSLSHVFQDFF*SWCPVRVLWVK Trigger: TTTGACCCAAAGGACCCTTACCGGACACCAACTGCAAAAGAAGTCCTGAAAGACATGGGACAGAGAGGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
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| CDS CAA 72 bp | ACATTCCTCTCTGTCCCATGTCTTTCAGGACTTCTTTaGCAGTTGGTGTCCGGTAAGGGTCCTTTGGGTCAA | + |
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Preference number: 6 (lower is better) Translates to: TFLSVPCLSGLL*QLVSGKGPLGQ Trigger: TTGACCCAAAGGACCCTTACCGGACACCAACTGCAAAAGAAGTCCTGAAAGACATGGGACAGAGAGGAATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
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| CDS CCA 72 bp | CCAGACACTCAGTACATGAAAACATGGCGCCCACAATaGCAAAGTTTTTGGCATAGGACATTCCTCTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: PDTQYMKTWRPQ*QSFWHRTFLSV Trigger: GACAGAGAGGAATGTCCTATGCCAAAAACTTTGCCATTGTGGGCGCCATGTTTTCATGTACTGAGTGTCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
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| CDS CCA 72 bp | GGTAAGACTCTACCAGACACTCAGTACATGAAAACATaGCGCCCACAATGGCAAAGTTTTTGGCATAGGACA | + |
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Preference number: 6 (lower is better) Translates to: GKTLPDTQYMKT*RPQWQSFWHRT Trigger: TGTCCTATGCCAAAAACTTTGCCATTGTGGGCGCCATGTTTTCATGTACTGAGTGTCTGGTAGAGTCTTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021203.7 ENSMUST00000120699.8 |
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