Pregenerated sensors for TIMM10B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000089847Ensembl transcript IDs: ENSMUST00000058333.10, ENSMUST00000106780.2, ENSMUST00000106783.8, ENSMUST00000106784.2, ENSMUST00000140577.2, ENSMUST00000150479.2, ENSMUST00000151193.2, ENSMUST00000209445.2, ENSMUST00000209588.2, ENSMUST00000210350.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCATCCAAGCACCTTCTCTCCAGGGGCCAGGGACGGCTAGCTGCCTaGTGGCGAGTCTCTGGTCTGTTCTGCAGGAATACCTGGCGCGGC | + |
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Preference number: 1 (lower is better) Translates to: PSKHLLSRGQGRLAA*WRVSGLFCRNTWRG Trigger: GCCGCGCCAGGTATTCCTGCAGAACAGACCAGAGACTCGCCATCAGGCAGCTAGCCGTCCCTGGCCCCTGGAGAGAAGGTGCTTGGATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151193.2 |
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| 3UTR TCA 90 bp | GAGGAAGTGGGGAGCTTAGTTGTTACAAGTTCCTGCCTGCTGCCCTaGAGATGCTGTCCTAGATCAGCACCACAGACCTGGCCTAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: EEVGSLVVTSSCLLP*RCCPRSAPQTWPSC Trigger: GCAGCTAGGCCAGGTCTGTGGTGCTGATCTAGGACAGCATCTTCAGGGCAGCAGGCAGGAACTTGTAACAACTAAGCTCCCCACTTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
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| 3UTR TCA 90 bp | TGCAATACTGGAAGGGAAGGGATGGGATGGAATTACGGGAAGCAGTaGAGAGGAAGTGGGGAGCTTAGTTGTTACAAGTTCCTGCCTGCT | + |
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Preference number: 1 (lower is better) Translates to: CNTGREGMGWNYGKQ*RGSGELSCYKFLPA Trigger: AGCAGGCAGGAACTTGTAACAACTAAGCTCCCCACTTCCTCTTCACTGCTTCCCGTAATTCCATCCCATCCCTTCCCTTCCAGTATTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
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| 3UTR CCA 90 bp | AAGATCTGCCTCTCAATATGGAATCAACTAAGATTTTCAACTTTTTaGCTGGCCAACACTTGGGAGGTAGAGGCAGAAGGACCAGGAGTT | + |
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Preference number: 1 (lower is better) Translates to: KICLSIWNQLRFSTF*LANTWEVEAEGPGV Trigger: AACTCCTGGTCCTTCTGCCTCTACCTCCCAAGTGTTGGCCAGCCAAAAAGTTGAAAATCTTAGTTGATTCCATATTGAGAGGCAGATCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
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| 3UTR CCA 90 bp | ACAGGCATGTATAACAAGCCTTGGAGCAAGATCTGCCTCTCAATATaGAATCAACTAAGATTTTCAACTTTTTGGCTGGCCAACACTTGG | + |
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Preference number: 1 (lower is better) Translates to: TGMYNKPWSKICLSI*NQLRFSTFWLANTW Trigger: CCAAGTGTTGGCCAGCCAAAAAGTTGAAAATCTTAGTTGATTCCATATTGAGAGGCAGATCTTGCTCCAAGGCTTGTTATACATGCCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
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| 3UTR GCA 90 bp | AATTTATACAAAATAACTCAACAGACACGATTTAGAGAAACAGCCTaGTGTAGTGCAAAGAATATCAGGCTTAATGTTCCAGCTGCACTT | + |
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Preference number: 1 (lower is better) Translates to: NLYKITQQTRFRETA*CSAKNIRLNVPAAL Trigger: AAGTGCAGCTGGAACATTAAGCCTGATATTCTTTGCACTACAGCAGGCTGTTTCTCTAAATCGTGTCTGTTGAGTTATTTTGTATAAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCGAGGCAGCCTCGTAGTCCGCGATGCGGCGCTGGACCAGGGCGGGCATGAGGCGTCCAGAGCTCGGTaGTGCAGGCTGGGCACACAG | + |
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Preference number: 2 (lower is better) Translates to: GRGSLVVRDAALDQGGHEASRAR*CRLGTQ Trigger: CTGTGTGCCCAGCCTGCACCACCGAGCTCTGGACGC...CTCATGCCCGCCCTGGTCCAGCGCCGCATCGCGGACTACGAGGCTGCCTCGGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150479.2 |
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| 3UTR-3UTR CCA 90 bp | GGGACGGCTAGCTGCCTGATGGCGAGTCTCTGGTCTGTTCTGCAGGAATACCTGTCCGCGATGCGGCGCTaGACCAGGGCGGGCATGAGG | + |
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Preference number: 2 (lower is better) Translates to: GTASCLMASLWSVLQEYLSAMRR*TRAGMR Trigger: CCTCATGCCCGCCCTGGTCCAGCGCCGCATCGCGGA...CAGGTATTCCTGCAGAACAGACCAGAGACTCGCCATCAGGCAGCTAGCCGTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140577.2 ENSMUST00000151193.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGGACGGCTAGCTGCCTGATGGCGAGTCTCTGGTCTGTTCTGCAGGAATACTCCGCGATGCGGCGCTaGACCAGGGCGGGCATGAGG | + |
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Preference number: 2 (lower is better) Translates to: PGTASCLMASLWSVLQEYSAMRR*TRAGMR Trigger: CCTCATGCCCGCCCTGGTCCAGCGCCGCATCGCGGA...GTATTCCTGCAGAACAGACCAGAGACTCGCCATCAGGCAGCTAGCCGTCCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140577.2 ENSMUST00000151193.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGTGCACGTAAGCGGCCATGAGGCGGTGGTTAGAATGGATGAGTTTCCCAGCTCCAGAGCTCGGTGGTaGAGGCTGGGCACACAGCGC | + |
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Preference number: 2 (lower is better) Translates to: EVHVSGHEAVVRMDEFPSSRARW*RLGTQR Trigger: GCGCTGTGTGCCCAGCCTGCACCACCGAGCTCTGGA...GCTGGGAAACTCATCCATTCTAACCACCGCCTCATGGCCGCTTACGTGCACCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150479.2 |
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| 3UTR-3UTR GCA 90 bp | GACGTAGCGCTTTCTCGGCAGCCACACAATATCCTGGGTCTCCACCTTCCTGGTCACAGAACCGGCAGCTaGCAGGAAAGGACTCCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: DVALSRQPHNILGLHLPGHRTGS*QERTPP Trigger: AGGAGGAGTCCTTTCCTGGCAGCTGCCGGTTCTGTG...ACCAGGAAGGTGGAGACCCAGGATATTGTGTGGCTGCCGAGAAAGCGCTACGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGGGACGGCTAGCTGCCTGATGGCGAGTCTCTGGTCTGTTCTGCAGGAATACGGGTGCTGGGAATGCTaGATTTGTCCTTCTACACAT | + |
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Preference number: 2 (lower is better) Translates to: PGTASCLMASLWSVLQEYGCWEC*ICPSTH Trigger: ATGTGTAGAAGGACAAATTCAGCATTCCCAGCACCC...GTATTCCTGCAGAACAGACCAGAGACTCGCCATCAGGCAGCTAGCCGTCCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151193.2 |
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| 3UTR-3UTR TCA 90 bp | TCACAGCAATTCTTTTTGACAGCTTCTCTCCAGGGGCCAGGGACGGCTAGCTGCCACAGCAATTCTTTTTaGCAGCTTCTCTCCAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: SQQFFLTASLQGPGTASCHSNSF*QLLSRG Trigger: GCCCCTGGAGAGAAGCTGTCAAAAAGAATTGCTGTG...GCAGCTAGCCGTCCCTGGCCCCTGGAGAGAAGCTGTCAAAAAGAATTGCTGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000140577.2 |
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| 3UTR-3UTR TCA 90 bp | GACGTAGCGCTTTCTCGGCAGCCACACAATATCCTGGGTCTCCACCTTCCTGGTGGGTGCTGGGAATGCTaGATTTGTCCTTCTACACAT | + |
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Preference number: 2 (lower is better) Translates to: DVALSRQPHNILGLHLPGGCWEC*ICPSTH Trigger: ATGTGTAGAAGGACAAATTCAGCATTCCCAGCACCC...ACCAGGAAGGTGGAGACCCAGGATATTGTGTGGCTGCCGAGAAAGCGCTACGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
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| 3UTR-3UTR CCA 90 bp | ATTGGGGAAATGGTCAACATTCCTGAATTCTTAGAGGCTTGTCTTTGTTCTGTTCTCGGTGGTGCAGGCTaGGCACACAGCGCTGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: IGEMVNIPEFLEACLCSVLGGAG*AHSAGN Trigger: GTTTCCAGCGCTGTGTGCCCAGCCTGCACCACCGAG...AACAGAACAAAGACAAGCCTCTAAGAATTCAGGAATGTTGACCATTTCCCCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150479.2 |
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| 3UTR-3UTR TCA 90 bp | TTACCTTCTTCCCCTAGGTTCACAGCAATTCTTTTTGACAGCTTCTCTCCAGGGTTGTTCTGTTGTCACTaGCCTCCTAGGAAGCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: LPSSPRFTAILFDSFSPGLFCCH*PPRKQW Trigger: CCACTGCTTCCTAGGAGGTCAGTGACAACAGAACAA...CCCTGGAGAGAAGCTGTCAAAAAGAATTGCTGTGAACCTAGGGGAAGAAGGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058333.10 ENSMUST00000140577.2 |
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| 3UTR CAA 90 bp | CAAGATCTGCCTCTCAATATGGAATCAACTAAGATTTTCAACTTTTaGGCTGGCCAACACTTGGGAGGTAGAGGCAGAAGGACCAGGAGT | + |
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Preference number: 2 (lower is better) Translates to: QDLPLNMESTKIFNF*AGQHLGGRGRRTRS Trigger: ACTCCTGGTCCTTCTGCCTCTACCTCCCAAGTGTTGGCCAGCCAAAAAGTTGAAAATCTTAGTTGATTCCATATTGAGAGGCAGATCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGGAGGTAGAGGCAGAAGGACCAGGAGTTCAAGGTCATCTTTAGTTACAATTTACACATGCACTAGATaGCAGAATAAAGGCTGGTAC | + |
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Preference number: 2 (lower is better) Translates to: LGGRGRRTRSSRSSLVTIYTCTR*QNKGWY Trigger: GTACCAGCCTTTATTCTGTCATCTAGTGCATGTGTA...AATTGTAACTAAAGATGACCTTGAACTCCTGGTCCTTCTGCCTCTACCTCCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
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| 3UTR-3UTR GCA 90 bp | GATGGAATTACGGGAAGCAGTGAAGAGGAAGTGGGGAGCTTAGTTGTTACAAGTAAGCACAAGTACTTGTaGTCCATCTCCTGTAAAACA | + |
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Preference number: 2 (lower is better) Translates to: DGITGSSEEEVGSLVVTSKHKYL*SISCKT Trigger: TGTTTTACAGGAGATGGAGCACAAGTACTTGTGCTT...ACTTGTAACAACTAAGCTCCCCACTTCCTCTTCACTGCTTCCCGTAATTCCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
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| 3UTR CAA 90 bp | AATATGGAATCAACTAAGATTTTCAACTTTTTGGCTGGCCAACACTaGGGAGGTAGAGGCAGAAGGACCAGGAGTTCAAGGTCATCTTTA | + |
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Preference number: 2 (lower is better) Translates to: NMESTKIFNFLAGQH*GGRGRRTRSSRSSL Trigger: TAAAGATGACCTTGAACTCCTGGTCCTTCTGCCTCTACCTCCCAAGTGTTGGCCAGCCAAAAAGTTGAAAATCTTAGTTGATTCCATATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
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| 3UTR-3UTR TCA 90 bp | AATTTCACAAAGGCAGGAAGTACTAAGAGAGTAAATTGGGGAAATGGTCAACATCACAGCAATTCTTTTTaGCAGCTTCTCTCCAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: NFTKAGSTKRVNWGNGQHHSNSF*QLLSRG Trigger: GCCCCTGGAGAGAAGCTGTCAAAAAGAATTGCTGTG...ATGTTGACCATTTCCCCAATTTACTCTCTTAGTACTTCCTGCCTTTGTGAAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058333.10 |
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| 3UTR-3UTR TCA 90 bp | AAAGGAAAAGAAAGGAAAGTGACACACCAAAATCTGCTTTCCAAGAACTGTGTATTGTTCTGTTGTCACTaGCCTCCTAGGAAGCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: KGKERKVTHQNLLSKNCVLFCCH*PPRKQW Trigger: CCACTGCTTCCTAGGAGGTCAGTGACAACAGAACAA...TACACAGTTCTTGGAAAGCAGATTTTGGTGTGTCACTTTCCTTTCTTTTCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
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| 3UTR-3UTR TCA 90 bp | AATTTCACAAAGGCAGGAAGTACTAAGAGAGTAAATTGGGGAAATGGTCAACATTTGTTCTGTTGTCACTaGCCTCCTAGGAAGCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: NFTKAGSTKRVNWGNGQHLFCCH*PPRKQW Trigger: CCACTGCTTCCTAGGAGGTCAGTGACAACAGAACAA...ATGTTGACCATTTCCCCAATTTACTCTCTTAGTACTTCCTGCCTTTGTGAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058333.10 ENSMUST00000106783.8 ENSMUST00000106784.2 ENSMUST00000150479.2 ENSMUST00000210350.2 |
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| 3UTR-3UTR GCA 90 bp | AATTTCACAAAGGCAGGAAGTACTAAGAGAGTAAATTGGGGAAATGGTCAACATCATAATCCCTGCTTTTaGTGGGGTGCTGGGAATGCT | + |
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Preference number: 2 (lower is better) Translates to: NFTKAGSTKRVNWGNGQHHNPCF*WGAGNA Trigger: AGCATTCCCAGCACCCCAGCAAAAGCAGGGATTATG...ATGTTGACCATTTCCCCAATTTACTCTCTTAGTACTTCCTGCCTTTGTGAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
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| 3UTR-3UTR CCA 90 bp | TTACCTTCTTCCCCTAGGTTCACAGCAATTCTTTTTGACAGCTTCTCTCCAGGGACTAAGAGAGTAAATTaGGGAAATGGTCAACATTCC | + |
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Preference number: 2 (lower is better) Translates to: LPSSPRFTAILFDSFSPGTKRVN*GNGQHS Trigger: GGAATGTTGACCATTTCCCCAATTTACTCTCTTAGT...CCCTGGAGAGAAGCTGTCAAAAAGAATTGCTGTGAACCTAGGGGAAGAAGGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058333.10 |
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| 3UTR TCA 72 bp | CAGCTTCTCTCCAGGGGCCAGGGACGGCTAGCTGCCTaGTGGCGAGTCTCTGGTCTGTTCTGCAGGAATACC | + |
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Preference number: 3 (lower is better) Translates to: QLLSRGQGRLAA*WRVSGLFCRNT Trigger: GGTATTCCTGCAGAACAGACCAGAGACTCGCCATCAGGCAGCTAGCCGTCCCTGGCCCCTGGAGAGAAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140577.2 |
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| 3UTR TCA 72 bp | CACCTTCTCTCCAGGGGCCAGGGACGGCTAGCTGCCTaGTGGCGAGTCTCTGGTCTGTTCTGCAGGAATACC | + |
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Preference number: 3 (lower is better) Translates to: HLLSRGQGRLAA*WRVSGLFCRNT Trigger: GGTATTCCTGCAGAACAGACCAGAGACTCGCCATCAGGCAGCTAGCCGTCCCTGGCCCCTGGAGAGAAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151193.2 |
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| 3UTR GCA 72 bp | CAAGCACCTTCTCTCCAGGGGCCAGGGACGGCTAGCTaGCTGATGGCGAGTCTCTGGTCTGTTCTGCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: QAPSLQGPGTAS*LMASLWSVLQE Trigger: TTCCTGCAGAACAGACCAGAGACTCGCCATCAGGCAGCTAGCCGTCCCTGGCCCCTGGAGAGAAGGTGCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151193.2 |
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| 3UTR TCA 72 bp | CCCCATGCTGTCGCTTGCCCTGCAGGCTGTCATCCTTaGAGCCCCACAAGGTGGTACATGCCACATCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: PHAVACPAGCHP*SPTRWYMPHPP Trigger: AGGAGGATGTGGCATGTACCACCTTGTGGGGCTTCAAGGATGACAGCCTGCAGGGCAAGCGACAGCATGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
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| 3UTR CCA 72 bp | GAGGCTGAGACAGGAGGATCACAAGCTGAAGGCCAATaGGTCCACGGCAAAACCACCTTCTCTCCAGGGGCC | + |
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Preference number: 3 (lower is better) Translates to: EAETGGSQAEGQ*VHGKTTFSPGA Trigger: GGCCCCTGGAGAGAAGGTGGTTTTGCCGTGGACCCATTGGCCTTCAGCTTGTGATCCTCCTGTCTCAGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106780.2 |
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| 3UTR-3UTR CAA 90 bp | GGGCCAGGGACGGCTAGCTGCCTGATGGCGAGTCTCTGGTCTGTTCTGCAGGAATCACAGCAATTCTTTTaGACAGCTTCTCTCCAGGGG | + |
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Preference number: 3 (lower is better) Translates to: GPGTASCLMASLWSVLQESQQFF*TASLQG Trigger: CCCCTGGAGAGAAGCTGTCAAAAAGAATTGCTGTGA...TTCCTGCAGAACAGACCAGAGACTCGCCATCAGGCAGCTAGCCGTCCCTGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140577.2 |
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| 3UTR TCA 72 bp | CCTAACACCATCTCCCTCTCCCTCGAGTTCTCTTCCTaGGGTTTGACCAATGCTGCCTTCCTGACTGACTCT | + |
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Preference number: 3 (lower is better) Translates to: PNTISLSLEFSS*GLTNAAFLTDS Trigger: AGAGTCAGTCAGGAAGGCAGCATTGGTCAAACCTCAGGAAGAGAACTCGAGGGAGAGGGAGATGGTGTTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
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| 3UTR-3UTR CAA 90 bp | CCAGGGACGGCTAGCTGCCTGATGGCGAGTCTCTGGTCTGTTCTGCAGGAATACGTTTTCTTCCTGCTTTaGTTGTTTGGTTTTACCTTC | + |
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Preference number: 3 (lower is better) Translates to: PGTASCLMASLWSVLQEYVFFLL*LFGFTF Trigger: GAAGGTAAAACCAAACAACAAAAGCAGGAAGAAAAC...GTATTCCTGCAGAACAGACCAGAGACTCGCCATCAGGCAGCTAGCCGTCCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140577.2 ENSMUST00000151193.2 |
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| 3UTR TCA 72 bp | GGAAGGGAAGGGATGGGATGGAATTACGGGAAGCAGTaGAGAGGAAGTGGGGAGCTTAGTTGTTACAAGTTC | + |
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Preference number: 3 (lower is better) Translates to: GREGMGWNYGKQ*RGSGELSCYKF Trigger: GAACTTGTAACAACTAAGCTCCCCACTTCCTCTTCACTGCTTCCCGTAATTCCATCCCATCCCTTCCCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
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| 3UTR CCA 72 bp | GCCACACAATATCCTGGGTCTCCACCTTCCTGGTTTTaGGAACTAACAAGTTCACAAGCTGCTCTACTCACA | + |
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Preference number: 3 (lower is better) Translates to: ATQYPGSPPSWF*ELTSSQAALLT Trigger: TGTGAGTAGAGCAGCTTGTGAACTTGTTAGTTCCCAAAACCAGGAAGGTGGAGACCCAGGATATTGTGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106780.2 ENSMUST00000106783.8 ENSMUST00000209445.2 |
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| 3UTR CCA 72 bp | CAACTAAGATTTTCAACTTTTTGGCTGGCCAACACTTaGGAGGTAGAGGCAGAAGGACCAGGAGTTCAAGGT | + |
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Preference number: 3 (lower is better) Translates to: QLRFSTFWLANT*EVEAEGPGVQG Trigger: ACCTTGAACTCCTGGTCCTTCTGCCTCTACCTCCCAAGTGTTGGCCAGCCAAAAAGTTGAAAATCTTAGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
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| 3UTR-3UTR CAA 90 bp | TTACCTTCTTCCCCTAGGTTCACAGCAATTCTTTTTGACAGCTTCTCTCCAGGGGTTTTCTTCCTGCTTTaGTTGTTTGGTTTTACCTTC | + |
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Preference number: 3 (lower is better) Translates to: LPSSPRFTAILFDSFSPGVFFLL*LFGFTF Trigger: GAAGGTAAAACCAAACAACAAAAGCAGGAAGAAAAC...CCCTGGAGAGAAGCTGTCAAAAAGAATTGCTGTGAACCTAGGGGAAGAAGGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000058333.10 ENSMUST00000140577.2 |
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| 3UTR TCA 72 bp | GGTAGGACAGCAAATCTGCTCTGCAAATCTGCTCTGTaGATAGTTGGTTTTGACGAGGAATTTAATTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: GRTANLLCKSAL*IVGFDEEFNSS Trigger: AGAGGAATTAAATTCCTCGTCAAAACCAACTATTCACAGAGCAGATTTGCAGAGCAGATTTGCTGTCCTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
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| 3UTR-3UTR CAA 90 bp | ATTGCTAATTTCACAAAGGCAGGAAGTACTAAGAGAGTAAATTGGGGAAATGGTTCACAGCAATTCTTTTaGACAGCTTCTCTCCAGGGG | + |
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Preference number: 3 (lower is better) Translates to: IANFTKAGSTKRVNWGNGSQQFF*TASLQG Trigger: CCCCTGGAGAGAAGCTGTCAAAAAGAATTGCTGTGA...ACCATTTCCCCAATTTACTCTCTTAGTACTTCCTGCCTTTGTGAAATTAGCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058333.10 |
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| 3UTR CCA 72 bp | TATAACAAGCCTTGGAGCAAGATCTGCCTCTCAATATaGAATCAACTAAGATTTTCAACTTTTTGGCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: YNKPWSKICLSI*NQLRFSTFWLA Trigger: GGCCAGCCAAAAAGTTGAAAATCTTAGTTGATTCCATATTGAGAGGCAGATCTTGCTCCAAGGCTTGTTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
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| 3UTR TCA 72 bp | ACTAAGAGAGTAAATTGGGGAAATGGTCAACATTCCTaGATTCTTAGAGGCTTGTCTTTGTTCTGTTGTCAC | + |
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Preference number: 3 (lower is better) Translates to: TKRVNWGNGQHS*ILRGLSLFCCH Trigger: GTGACAACAGAACAAAGACAAGCCTCTAAGAATTCAGGAATGTTGACCATTTCCCCAATTTACTCTCTTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058333.10 ENSMUST00000106783.8 ENSMUST00000106784.2 ENSMUST00000150479.2 ENSMUST00000210350.2 |
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| 3UTR GCA 72 bp | AAAATAACTCAACAGACACGATTTAGAGAAACAGCCTaGTGTAGTGCAAAGAATATCAGGCTTAATGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: KITQQTRFRETA*CSAKNIRLNVP Trigger: TGGAACATTAAGCCTGATATTCTTTGCACTACAGCAGGCTGTTTCTCTAAATCGTGTCTGTTGAGTTATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
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| CDS-3UTR GCA 90 bp | GGGCCAGGGACGGCTAGCTGCCTGATGGCGAGTCTCTGGTCTGTTCTGCAGGAATCCAGAGCTCGGTGGTaGAGGCTGGGCACACAGCGC | + |
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Preference number: 4 (lower is better) Translates to: GPGTASCLMASLWSVLQESRARW*RLGTQR Trigger: GCGCTGTGTGCCCAGCCTGCACCACCGAGCTCTGGA...TTCCTGCAGAACAGACCAGAGACTCGCCATCAGGCAGCTAGCCGTCCCTGGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140577.2 ENSMUST00000151193.2 |
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| CDS-3UTR GCA 90 bp | CCCATGCTGTCGCTTGCCCTGCAGGCTGTCATCCTTGAAGCCCCACAAGGTGGTTCCAGAGCTCGGTGGTaGAGGCTGGGCACACAGCGC | + |
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Preference number: 4 (lower is better) Translates to: PMLSLALQAVILEAPQGGSRARW*RLGTQR Trigger: GCGCTGTGTGCCCAGCCTGCACCACCGAGCTCTGGA...ACCACCTTGTGGGGCTTCAAGGATGACAGCCTGCAGGGCAAGCGACAGCATGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
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| CDS-3UTR CCA 90 bp | GCTAGCTGCCTGATGGCGAGTCTCTGGTCTGTTCTGCAGGAATACCTGGCGCGGCTCGGTGGTGCAGGCTaGGCACACAGCGCTGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: ASCLMASLWSVLQEYLARLGGAG*AHSAGN Trigger: GTTTCCAGCGCTGTGTGCCCAGCCTGCACCACCGAG...CCGCGCCAGGTATTCCTGCAGAACAGACCAGAGACTCGCCATCAGGCAGCTAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140577.2 ENSMUST00000151193.2 |
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| CDS-3UTR CCA 90 bp | CCAGGGACGGCTAGCTGCCTGATGGCGAGTCTCTGGTCTGTTCTGCAGGAATACGCGTCCAGAGCTCGGTaGTGCAGGCTGGGCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: PGTASCLMASLWSVLQEYASRAR*CRLGTQ Trigger: CTGTGTGCCCAGCCTGCACCACCGAGCTCTGGACGC...GTATTCCTGCAGAACAGACCAGAGACTCGCCATCAGGCAGCTAGCCGTCCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140577.2 ENSMUST00000151193.2 |
||
| CDS-3UTR CCA 90 bp | GCGCTTTCTCGGCAGCCACACAATATCCTGGGTCTCCACCTTCCTGGTTTTGGGGCGTCCAGAGCTCGGTaGTGCAGGCTGGGCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: ALSRQPHNILGLHLPGFGASRAR*CRLGTQ Trigger: CTGTGTGCCCAGCCTGCACCACCGAGCTCTGGACGC...CCCAAAACCAGGAAGGTGGAGACCCAGGATATTGTGTGGCTGCCGAGAAAGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000106780.2 ENSMUST00000106783.8 |
||
| CDS-3UTR CCA 90 bp | AGCGGCCATGAGGCGGTGGTTAGAATGGATGAGTTTCCCAGCACAGCTGTGCAGGCGTCCAGAGCTCGGTaGTGCAGGCTGGGCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: SGHEAVVRMDEFPSTAVQASRAR*CRLGTQ Trigger: CTGTGTGCCCAGCCTGCACCACCGAGCTCTGGACGC...CTGCACAGCTGTGCTGGGAAACTCATCCATTCTAACCACCGCCTCATGGCCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140577.2 ENSMUST00000151193.2 |
||
| 3UTR CAA 72 bp | ACCCCATGCTGTCGCTTGCCCTGCAGGCTGTCATCCTaGAAGCCCCACAAGGTGGTACATGCCACATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TPCCRLPCRLSS*KPHKVVHATSS Trigger: GGAGGATGTGGCATGTACCACCTTGTGGGGCTTCAAGGATGACAGCCTGCAGGGCAAGCGACAGCATGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
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| CDS-3UTR TCA 90 bp | GGGTCTCCACCTTCCTGGTTTTGGGAACTAACAAGTTCACAAGCTGCTCTACTCGGACCAGGGCGGGCATaGGGTGCACGTAAGCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSPPSWFWELTSSQAALLGPGRA*GARKRP Trigger: TGGCCGCTTACGTGCACCTCATGCCCGCCCTGGTCC...GAGTAGAGCAGCTTGTGAACTTGTTAGTTCCCAAAACCAGGAAGGTGGAGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106780.2 ENSMUST00000106783.8 |
||
| CDS-3UTR TCA 90 bp | ACGGGTTTATTGGCTCCAAGAAAAGGAGCAACAGCACCCAGCTTTCAAGCTCAAGGACCAGGGCGGGCATaGGGTGCACGTAAGCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGLLAPRKGATAPSFQAQGPGRA*GARKRP Trigger: TGGCCGCTTACGTGCACCTCATGCCCGCCCTGGTCC...TTGAGCTTGAAAGCTGGGTGCTGTTGCTCCTTTTCTTGGAGCCAATAAACCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106783.8 ENSMUST00000209588.2 |
||
| CDS-3UTR CCA 90 bp | TTACCTTCTTCCCCTAGGTTCACAGCAATTCTTTTTGACAGCTTCTCTCCAGGGTCCGCGATGCGGCGCTaGACCAGGGCGGGCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPSSPRFTAILFDSFSPGSAMRR*TRAGMR Trigger: CCTCATGCCCGCCCTGGTCCAGCGCCGCATCGCGGA...CCCTGGAGAGAAGCTGTCAAAAAGAATTGCTGTGAACCTAGGGGAAGAAGGTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058333.10 |
||
| CDS-3UTR CCA 90 bp | ACAATATCCTGGGTCTCCACCTTCCTGGTTTTGGGAACTAACAAGTTCACAAGCTCCGCGATGCGGCGCTaGACCAGGGCGGGCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TISWVSTFLVLGTNKFTSSAMRR*TRAGMR Trigger: CCTCATGCCCGCCCTGGTCCAGCGCCGCATCGCGGA...GCTTGTGAACTTGTTAGTTCCCAAAACCAGGAAGGTGGAGACCCAGGATATTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106780.2 ENSMUST00000106783.8 |
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| CDS-3UTR CCA 90 bp | CCTGAATACACATGTGAATCCCACAAGAGGGGGTGGGGAGTAATGAAACAAGAATCCGCGATGCGGCGCTaGACCAGGGCGGGCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PEYTCESHKRGWGVMKQESAMRR*TRAGMR Trigger: CCTCATGCCCGCCCTGGTCCAGCGCCGCATCGCGGA...TTCTTGTTTCATTACTCCCCACCCCCTCTTGTGGGATTCACATGTGTATTCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
||
| CDS-3UTR CCA 90 bp | GCTCAATCTCTCTGTACACATTTAGATAAGCCCAAGGTCCATAGAGGAGCCCATTCCGCGATGCGGCGCTaGACCAGGGCGGGCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AQSLCTHLDKPKVHRGAHSAMRR*TRAGMR Trigger: CCTCATGCCCGCCCTGGTCCAGCGCCGCATCGCGGA...ATGGGCTCCTCTATGGACCTTGGGCTTATCTAAATGTGTACAGAGAGATTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106783.8 ENSMUST00000209588.2 |
||
| CDS-3UTR TCA 90 bp | TTACCTTCTTCCCCTAGGTTCACAGCAATTCTTTTTGACAGCTTCTCTCCAGGGGGACCAGGGCGGGCATaGGGTGCACGTAAGCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPSSPRFTAILFDSFSPGGPGRA*GARKRP Trigger: TGGCCGCTTACGTGCACCTCATGCCCGCCCTGGTCC...CCCTGGAGAGAAGCTGTCAAAAAGAATTGCTGTGAACCTAGGGGAAGAAGGTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000058333.10 |
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| CDS-3UTR TCA 90 bp | CAGCACATGTTTATTGAAAGGATACATACAGGTGCTGACGTAGCGCTTTCTCGGGGACCAGGGCGGGCATaGGGTGCACGTAAGCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QHMFIERIHTGADVALSRGPGRA*GARKRP Trigger: TGGCCGCTTACGTGCACCTCATGCCCGCCCTGGTCC...CCGAGAAAGCGCTACGTCAGCACCTGTATGTATCCTTTCAATAAACATGTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106780.2 ENSMUST00000106783.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCAAGAAAAGGAGCAACAGCACCCAGCTTTCAAGCTCAATCTCTCTGTACATCCAGAGCTCGGTGGTaGAGGCTGGGCACACAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: APRKGATAPSFQAQSLCTSRARW*RLGTQR Trigger: GCGCTGTGTGCCCAGCCTGCACCACCGAGCTCTGGA...TGTACAGAGAGATTGAGCTTGAAAGCTGGGTGCTGTTGCTCCTTTTCTTGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106783.8 ENSMUST00000151193.2 |
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| CDS-3UTR CCA 90 bp | GTAATTCCAGGATCTAGGAGGCTGAGACAGGAGGATCACAAGCTGAAGGCCAATCTCGGTGGTGCAGGCTaGGCACACAGCGCTGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VIPGSRRLRQEDHKLKANLGGAG*AHSAGN Trigger: GTTTCCAGCGCTGTGTGCCCAGCCTGCACCACCGAG...ATTGGCCTTCAGCTTGTGATCCTCCTGTCTCAGCCTCCTAGATCCTGGAATTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106780.2 ENSMUST00000106783.8 |
||
| CDS-3UTR GCA 90 bp | CACATGTTTATTGAAAGGATACATACAGGTGCTGACGTAGCGCTTTCTCGGCAGTCCAGAGCTCGGTGGTaGAGGCTGGGCACACAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HMFIERIHTGADVALSRQSRARW*RLGTQR Trigger: GCGCTGTGTGCCCAGCCTGCACCACCGAGCTCTGGA...CTGCCGAGAAAGCGCTACGTCAGCACCTGTATGTATCCTTTCAATAAACATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106780.2 ENSMUST00000106783.8 |
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| CDS-3UTR CCA 90 bp | CAGCACATGTTTATTGAAAGGATACATACAGGTGCTGACGTAGCGCTTTCTCGGGCGTCCAGAGCTCGGTaGTGCAGGCTGGGCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: QHMFIERIHTGADVALSRASRAR*CRLGTQ Trigger: CTGTGTGCCCAGCCTGCACCACCGAGCTCTGGACGC...CCGAGAAAGCGCTACGTCAGCACCTGTATGTATCCTTTCAATAAACATGTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106780.2 ENSMUST00000106783.8 |
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| CDS-3UTR CCA 90 bp | GCAACAGCACCCAGCTTTCAAGCTCAATCTCTCTGTACACATTTAGATAAGCCCCTCGGTGGTGCAGGCTaGGCACACAGCGCTGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ATAPSFQAQSLCTHLDKPLGGAG*AHSAGN Trigger: GTTTCCAGCGCTGTGTGCCCAGCCTGCACCACCGAG...GGGCTTATCTAAATGTGTACAGAGAGATTGAGCTTGAAAGCTGGGTGCTGTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106783.8 ENSMUST00000151193.2 |
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| CDS-3UTR CCA 90 bp | CTCGGCAGCCACACAATATCCTGGGTCTCCACCTTCCTGGTTTTGGGAACTAACGCGGCCATGAGGCGGTaGTTAGAATGGATGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGSHTISWVSTFLVLGTNAAMRR*LEWMSF Trigger: GAAACTCATCCATTCTAACCACCGCCTCATGGCCGC...GTTAGTTCCCAAAACCAGGAAGGTGGAGACCCAGGATATTGTGTGGCTGCCGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106780.2 ENSMUST00000106783.8 |
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| CDS-3UTR TCA 90 bp | GGGTCTCCACCTTCCTGGTTTTGGGAACTAACAAGTTCACAAGCTGCTCTACTCCAGGATCTAGGAGGCTaGGACAGGAGGATCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSPPSWFWELTSSQAALLQDLGG*DRRITS Trigger: GCTTGTGATCCTCCTGTCTCAGCCTCCTAGATCCTG...GAGTAGAGCAGCTTGTGAACTTGTTAGTTCCCAAAACCAGGAAGGTGGAGACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209445.2 |
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| CDS-3UTR GCA 90 bp | GGGGAAATGGTCAACATTCCTGAATTCTTAGAGGCTTGTCTTTGTTCTGTTGTCTCCAGAGCTCGGTGGTaGAGGCTGGGCACACAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GEMVNIPEFLEACLCSVVSRARW*RLGTQR Trigger: GCGCTGTGTGCCCAGCCTGCACCACCGAGCTCTGGA...GACAACAGAACAAAGACAAGCCTCTAAGAATTCAGGAATGTTGACCATTTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058333.10 ENSMUST00000106783.8 ENSMUST00000210350.2 |
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| CDS-3UTR GCA 90 bp | GGGGAAATGGTCAACATTCCTGAATTCTTAGAGGCTTGTCTTTGTTCTGTTGTCTCCAGAGCTCGGTGGTaGAGGCTGGGCACACAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GEMVNIPEFLEACLCSVVSRARW*RLGTQR Trigger: CCGCTGTGTGCCCAGCCTGCACCACCGAGCTCTGGA...GACAACAGAACAAAGACAAGCCTCTAAGAATTCAGGAATGTTGACCATTTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106784.2 |
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| CDS-3UTR CCA 90 bp | TTCTCGGCAGCCACACAATATCCTGGGTCTCCACCTTCCTGGTTTTGGGAACTAGCGGCCATGAGGCGGTaGTTAGAATGGATGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSAATQYPGSPPSWFWELAAMRR*LEWMSF Trigger: GAAACTCATCCATTCTAACCACCGCCTCATGGCCGC...TAGTTCCCAAAACCAGGAAGGTGGAGACCCAGGATATTGTGTGGCTGCCGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106780.2 ENSMUST00000106783.8 |
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| CDS-3UTR CCA 90 bp | ATTGGGGAAATGGTCAACATTCCTGAATTCTTAGAGGCTTGTCTTTGTTCTGTTTCCGCGATGCGGCGCTaGACCAGGGCGGGCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IGEMVNIPEFLEACLCSVSAMRR*TRAGMR Trigger: CCTCATGCCCGCCCTGGTCCAGCGCCGCATCGCGGA...AACAGAACAAAGACAAGCCTCTAAGAATTCAGGAATGTTGACCATTTCCCCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058333.10 ENSMUST00000106783.8 ENSMUST00000106784.2 ENSMUST00000210350.2 |
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| CDS-3UTR CCA 90 bp | AATTTCACAAAGGCAGGAAGTACTAAGAGAGTAAATTGGGGAAATGGTCAACATTCCGCGATGCGGCGCTaGACCAGGGCGGGCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NFTKAGSTKRVNWGNGQHSAMRR*TRAGMR Trigger: CCTCATGCCCGCCCTGGTCCAGCGCCGCATCGCGGA...ATGTTGACCATTTCCCCAATTTACTCTCTTAGTACTTCCTGCCTTTGTGAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058333.10 ENSMUST00000106783.8 ENSMUST00000106784.2 ENSMUST00000210350.2 |
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| CDS-3UTR TCA 90 bp | AATTTCACAAAGGCAGGAAGTACTAAGAGAGTAAATTGGGGAAATGGTCAACATGGACCAGGGCGGGCATaGGGTGCACGTAAGCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NFTKAGSTKRVNWGNGQHGPGRA*GARKRP Trigger: TGGCCGCTTACGTGCACCTCATGCCCGCCCTGGTCC...ATGTTGACCATTTCCCCAATTTACTCTCTTAGTACTTCCTGCCTTTGTGAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058333.10 ENSMUST00000106783.8 ENSMUST00000106784.2 ENSMUST00000210350.2 |
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| CDS-3UTR GCA 90 bp | ACTGTAAAAACGGGTTTATTGGCTCCAAGAAAAGGAGCAACAGCACCCAGCTTTTTCCCAGCACAGCTGTaGAGGCAGGCCTCGTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TVKTGLLAPRKGATAPSFFPAQL*RQASFL Trigger: GAGAAACGAGGCCTGCCTGCACAGCTGTGCTGGGAA...AAAGCTGGGTGCTGTTGCTCCTTTTCTTGGAGCCAATAAACCCGTTTTTACAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000209588.2 |
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| CDS-3UTR CCA 90 bp | ATTGGGGAAATGGTCAACATTCCTGAATTCTTAGAGGCTTGTCTTTGTTCTGTTGCGTCCAGAGCTCGGTaGTGCAGGCTGGGCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: IGEMVNIPEFLEACLCSVASRAR*CRLGTQ Trigger: CTGTGTGCCCAGCCTGCACCACCGAGCTCTGGACGC...AACAGAACAAAGACAAGCCTCTAAGAATTCAGGAATGTTGACCATTTCCCCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058333.10 ENSMUST00000106783.8 ENSMUST00000106784.2 ENSMUST00000210350.2 |
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| CDS-3UTR CCA 90 bp | ATTGGCTCCAAGAAAAGGAGCAACAGCACCCAGCTTTCAAGCTCAATCTCTCTGGCGGCCATGAGGCGGTaGTTAGAATGGATGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IGSKKRSNSTQLSSSISLAAMRR*LEWMSF Trigger: GAAACTCATCCATTCTAACCACCGCCTCATGGCCGC...CAGAGAGATTGAGCTTGAAAGCTGGGTGCTGTTGCTCCTTTTCTTGGAGCCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106783.8 ENSMUST00000209588.2 |
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| CDS-3UTR CCA 90 bp | AATTTCACAAAGGCAGGAAGTACTAAGAGAGTAAATTGGGGAAATGGTCAACATGCGTCCAGAGCTCGGTaGTGCAGGCTGGGCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: NFTKAGSTKRVNWGNGQHASRAR*CRLGTQ Trigger: CTGTGTGCCCAGCCTGCACCACCGAGCTCTGGACGC...ATGTTGACCATTTCCCCAATTTACTCTCTTAGTACTTCCTGCCTTTGTGAAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058333.10 ENSMUST00000106783.8 ENSMUST00000106784.2 ENSMUST00000210350.2 |
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| 3UTR CAA 72 bp | AGCCACACAATATCCTGGGTCTCCACCTTCCTGGTTTaGGGAACTAACAAGTTCACAAGCTGCTCTACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SHTISWVSTFLV*GTNKFTSCSTH Trigger: GTGAGTAGAGCAGCTTGTGAACTTGTTAGTTCCCAAAACCAGGAAGGTGGAGACCCAGGATATTGTGTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106780.2 ENSMUST00000106783.8 ENSMUST00000209445.2 |
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| CDS-3UTR CCA 90 bp | AATTTCACAAAGGCAGGAAGTACTAAGAGAGTAAATTGGGGAAATGGTCAACATCTCGGTGGTGCAGGCTaGGCACACAGCGCTGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: NFTKAGSTKRVNWGNGQHLGGAG*AHSAGN Trigger: GTTTCCAGCGCTGTGTGCCCAGCCTGCACCACCGAG...ATGTTGACCATTTCCCCAATTTACTCTCTTAGTACTTCCTGCCTTTGTGAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058333.10 ENSMUST00000106783.8 ENSMUST00000210350.2 |
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| CDS-3UTR CCA 90 bp | AAGTTCACAAGCTGCTCTACTCACATGTGTACTTGTCAAGGAATAAGATTAATCCTCGGTGGTGCAGGCTaGGCACACAGCGCTGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KFTSCSTHMCTCQGIRLILGGAG*AHSAGN Trigger: GTTTCCAGCGCTGTGTGCCCAGCCTGCACCACCGAG...GATTAATCTTATTCCTTGACAAGTACACATGTGAGTAGAGCAGCTTGTGAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106780.2 ENSMUST00000106783.8 |
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| CDS-3UTR CCA 90 bp | ATTGGGGAAATGGTCAACATTCCTGAATTCTTAGAGGCTTGTCTTTGTTCTGTTCTCGGTGGTGCAGGCTaGGCACACAGCGGTTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IGEMVNIPEFLEACLCSVLGGAG*AHSGFS Trigger: TGAGAAACCGCTGTGTGCCCAGCCTGCACCACCGAG...AACAGAACAAAGACAAGCCTCTAAGAATTCAGGAATGTTGACCATTTCCCCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106784.2 |
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| CDS-3UTR GCA 90 bp | ATTGGGGAAATGGTCAACATTCCTGAATTCTTAGAGGCTTGTCTTTGTTCTGTTTTCCCAGCACAGCTGTaGAGGCAGGCCTCACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IGEMVNIPEFLEACLCSVFPAQL*RQASLS Trigger: AGACAGTGAGGCCTGCCTGCACAGCTGTGCTGGGAA...AACAGAACAAAGACAAGCCTCTAAGAATTCAGGAATGTTGACCATTTCCCCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106784.2 |
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| 3UTR CAA 72 bp | TCAACTAAGATTTTCAACTTTTTGGCTGGCCAACACTaGGGAGGTAGAGGCAGAAGGACCAGGAGTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: STKIFNFLAGQH*GGRGRRTRSSR Trigger: CCTTGAACTCCTGGTCCTTCTGCCTCTACCTCCCAAGTGTTGGCCAGCCAAAAAGTTGAAAATCTTAGTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
||
| CDS-3UTR TCA 90 bp | GGGGAAATGGTCAACATTCCTGAATTCTTAGAGGCTTGTCTTTGTTCTGTTGTCCACAGCAATTCTTTTTaGCAGCTTCTCTCCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GEMVNIPEFLEACLCSVVHSNSF*QLLSRG Trigger: GCCCCTGGAGAGAAGCTGTCAAAAAGAATTGCTGTG...GACAACAGAACAAAGACAAGCCTCTAAGAATTCAGGAATGTTGACCATTTCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106784.2 |
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| 3UTR CAA 72 bp | CCTCTCAATATGGAATCAACTAAGATTTTCAACTTTTaGGCTGGCCAACACTTGGGAGGTAGAGGCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLNMESTKIFNF*AGQHLGGRGRR Trigger: CCTTCTGCCTCTACCTCCCAAGTGTTGGCCAGCCAAAAAGTTGAAAATCTTAGTTGATTCCATATTGAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106783.8 |
||
| CDS-3UTR CCA 90 bp | ATTGCTAATTTCACAAAGGCAGGAAGTACTAAGAGAGTAAATTGGGGAAATGGTGCGGCCATGAGGCGGTaGTTAGAATGGATGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IANFTKAGSTKRVNWGNGAAMRR*LEWMSF Trigger: GAAACTCATCCATTCTAACCACCGCCTCATGGCCGC...ACCATTTCCCCAATTTACTCTCTTAGTACTTCCTGCCTTTGTGAAATTAGCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058333.10 ENSMUST00000106783.8 ENSMUST00000210350.2 |
||
| CDS-3UTR CCA 90 bp | AATTTCACAAAGGCAGGAAGTACTAAGAGAGTAAATTGGGGAAATGGTCAACATGCGGCCATGAGGCGGTaGTTAGAATGGATGAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NFTKAGSTKRVNWGNGQHAAMRR*LEWMSF Trigger: GAAACTCATCCATTCTAACCACCGCCTCATGGCCGC...ATGTTGACCATTTCCCCAATTTACTCTCTTAGTACTTCCTGCCTTTGTGAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000058333.10 ENSMUST00000106783.8 ENSMUST00000106784.2 ENSMUST00000210350.2 |
||
| CDS-3UTR CAA 90 bp | AGCGGCCATGAGGCGGTGGTTAGAATGGATGAGTTTCCCAGCACAGCTGTGCAGACTCACGTTTCTCAGTaGCTGCTGCTGCTGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SGHEAVVRMDEFPSTAVQTHVSQ*LLLLLH Trigger: ATGGAGCAGCAGCAGCAGCAACTGAGAAACGTGAGT...CTGCACAGCTGTGCTGGGAAACTCATCCATTCTAACCACCGCCTCATGGCCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150479.2 |
||
| CDS-3UTR CAA 90 bp | AACGGGTTTATTGGCTCCAAGAAAAGGAGCAACAGCACCCAGCTTTCAAGCTCAGGCCTCGTTTCTCAGTaGCTGCTGCTGCTGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: NGFIGSKKRSNSTQLSSSGLVSQ*LLLLLH Trigger: ATGGAGCAGCAGCAGCAGCAACTGAGAAACGAGGCC...TGAGCTTGAAAGCTGGGTGCTGTTGCTCCTTTTCTTGGAGCCAATAAACCCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209588.2 |
||
| CDS GCA 90 bp | TCCGATTGTAGACCAACAGGAAGTCTCGCAACCCTGGAAACAAACTaGACGTCTAACCCAGAGAGCAACTGCGCTCTCACTCACGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SDCRPTGSLATLETN*TSNPESNCALTHVS Trigger: AGAAACGTGAGTGAGAGCGCAGTTGCTCTCTGGGTTAGACGTGCAGTTTGTTTCCAGGGTTGCGAGACTTCCTGTTGGTCTACAATCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150479.2 |
||
| CDS-3UTR CAA 90 bp | AATTTCACAAAGGCAGGAAGTACTAAGAGAGTAAATTGGGGAAATGGTCAACATTCACAGCAATTCTTTTaGACAGCTTCTCTCCAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: NFTKAGSTKRVNWGNGQHSQQFF*TASLQG Trigger: CCCCTGGAGAGAAGCTGTCAAAAAGAATTGCTGTGA...ATGTTGACCATTTCCCCAATTTACTCTCTTAGTACTTCCTGCCTTTGTGAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106784.2 |
||
| CDS CCA 72 bp | CAAGCTGAAGGCCAATGGGTCCACGGCAAAACCACCTaGCGCGGCCGAGGCAGCCTCGTAGTCCGCGATGCG | + |
|
Preference number: 6 (lower is better) Translates to: QAEGQWVHGKTT*RGRGSLVVRDA Trigger: CGCATCGCGGACTACGAGGCTGCCTCGGCCGCGCCAGGTGGTTTTGCCGTGGACCCATTGGCCTTCAGCTTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209445.2 |
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| CDS CCA 72 bp | GAGGCTGAGACAGGAGGATCACAAGCTGAAGGCCAATaGGTCCACGGCAAAACCACCTGGCGCGGCCGAGGC | + |
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Preference number: 6 (lower is better) Translates to: EAETGGSQAEGQ*VHGKTTWRGRG Trigger: GCCTCGGCCGCGCCAGGTGGTTTTGCCGTGGACCCATTGGCCTTCAGCTTGTGATCCTCCTGTCTCAGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209445.2 |
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| CDS GCA 72 bp | ACTGTCTCCACCTCCTCAGCGTCCAGAGCTCGGTGGTaGAGGCTGGGCACACAGCGGTTTCTCAGTTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: TVSTSSASRARW*RLGTQRFLSCC Trigger: GCAGCAACTGAGAAACCGCTGTGTGCCCAGCCTGCACCACCGAGCTCTGGACGCTGAGGAGGTGGAGACAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106784.2 |
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| CDS CCA 72 bp | CTCACTGTCTCCACCTCCTCAGCGTCCAGAGCTCGGTaGTGCAGGCTGGGCACACAGCGGTTTCTCAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: LTVSTSSASRAR*CRLGTQRFLSC Trigger: GCAACTGAGAAACCGCTGTGTGCCCAGCCTGCACCACCGAGCTCTGGACGCTGAGGAGGTGGAGACAGTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106784.2 |
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| CDS GCA 72 bp | ACTGTCTCCACCTCCTCAGCGTCCAGAGCTCGGTGGTaGAGGCTGGGCACACAGCGCTGGAAACACAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: TVSTSSASRARW*RLGTQRWKHSS Trigger: AGAACTGTGTTTCCAGCGCTGTGTGCCCAGCCTGCACCACCGAGCTCTGGACGCTGAGGAGGTGGAGACAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140577.2 ENSMUST00000151193.2 |
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| CDS GCA 72 bp | CGGTGGTTAGAATGGATGAGTTTCCCAGCACAGCTGTaGAGGCAGGCCTCGTTTCTCAGTTGCTGCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: RWLEWMSFPAQL*RQASFLSCCCC Trigger: GCAGCAGCAGCAACTGAGAAACGAGGCCTGCCTGCACAGCTGTGCTGGGAAACTCATCCATTCTAACCACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209588.2 |
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| CDS GCA 72 bp | CTGGAAACAAACTGCACGTCTAACCCAGAGAGCAACTaGGCTCTCACTCACGTTTCTCAGTTGCTGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LETNCTSNPESN*ALTHVSQLLLL Trigger: CAGCAGCAGCAACTGAGAAACGTGAGTGAGAGCGCAGTTGCTCTCTGGGTTAGACGTGCAGTTTGTTTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150479.2 |
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| CDS CCA 72 bp | CATCCGATTGTAGACCAACAGGAAGTCTCGCAACCCTaGAAACAAACTGCACGTCTAACCCAGAGAGCAACT | + |
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Preference number: 6 (lower is better) Translates to: HPIVDQQEVSQP*KQTARLTQRAT Trigger: AGTTGCTCTCTGGGTTAGACGTGCAGTTTGTTTCCAGGGTTGCGAGACTTCCTGTTGGTCTACAATCGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150479.2 |
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