Pregenerated sensors for TIMD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055546Ensembl transcript IDs: ENSMUST00000068877.7
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGTACACCATCCTTGTCACTGGCACCCCTGCTGTGATGGGTACCTaGCAGCTTCCAAAATCCAAACTCTCTGCAAGAGTTCAGAAGGCA | + |
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Preference number: 1 (lower is better) Translates to: LYTILVTGTPAVMGT*QLPKSKLSARVQKA Trigger: TGCCTTCTGAACTCTTGCAGAGAGTTTGGATTTTGGAAGCTGCCAGGTACCCATCACAGCAGGGGTGCCAGTGACAAGGATGGTGTACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| 3UTR TCA 90 bp | CAGTGTTTCATTTGTACACCATCCTTGTCACTGGCACCCCTGCTGTaGTGGGTACCTGGCAGCTTCCAAAATCCAAACTCTCTGCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: QCFICTPSLSLAPLL*WVPGSFQNPNSLQE Trigger: CTCTTGCAGAGAGTTTGGATTTTGGAAGCTGCCAGGTACCCATCACAGCAGGGGTGCCAGTGACAAGGATGGTGTACAAATGAAACACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| 3UTR CCA 90 bp | TATTTGGATAGCTTCAGTGTTTCATTTGTACACCATCCTTGTCACTaGCACCCCTGCTGTGATGGGTACCTGGCAGCTTCCAAAATCCAA | + |
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Preference number: 1 (lower is better) Translates to: YLDSFSVSFVHHPCH*HPCCDGYLAASKIQ Trigger: TTGGATTTTGGAAGCTGCCAGGTACCCATCACAGCAGGGGTGCCAGTGACAAGGATGGTGTACAAATGAAACACTGAAGCTATCCAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| 3UTR-3UTR CCA 90 bp | GATAGCTTCAGTGTTTCATTTGTACACCATCCTTGTCACTGGCACCCCTGCTGTAGACTCCCAAAGCTGTaGCAAGGATTTCACCATCAC | + |
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Preference number: 2 (lower is better) Translates to: DSFSVSFVHHPCHWHPCCRLPKL*QGFHHH Trigger: GTGATGGTGAAATCCTTGCCACAGCTTTGGGAGTCT...ACAGCAGGGGTGCCAGTGACAAGGATGGTGTACAAATGAAACACTGAAGCTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| 3UTR-3UTR TCA 90 bp | GATAGCTTCAGTGTTTCATTTGTACACCATCCTTGTCACTGGCACCCCTGCTGTGGAGCTCTGTATAAATaGAGTTCAGCTACCACCAAT | + |
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Preference number: 2 (lower is better) Translates to: DSFSVSFVHHPCHWHPCCGALYK*SSATTN Trigger: ATTGGTGGTAGCTGAACTTCATTTATACAGAGCTCC...ACAGCAGGGGTGCCAGTGACAAGGATGGTGTACAAATGAAACACTGAAGCTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| 3UTR-3UTR GCA 90 bp | AAGAACTCTAAGACCCCAATTTTCCCAGCAACATGCGGCAACTCTAGGAGGACCCAGACAGAGTATTCTTaGTCAGACACACATTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: KNSKTPIFPATCGNSRRTQTEYS*SDTHFL Trigger: AAGAAAATGTGTGTCTGAGCAAGAATACTCTGTCTG...GGTCCTCCTAGAGTTGCCGCATGTTGCTGGGAAAATTGGGGTCTTAGAGTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| 3UTR CAA 90 bp | GAATTACACTTAGAGGAATTTATTTGGATAGCTTCAGTGTTTCATTaGTACACCATCCTTGTCACTGGCACCCCTGCTGTGATGGGTACC | + |
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Preference number: 2 (lower is better) Translates to: ELHLEEFIWIASVFH*YTILVTGTPAVMGT Trigger: GGTACCCATCACAGCAGGGGTGCCAGTGACAAGGATGGTGTACAAATGAAACACTGAAGCTATCCAAATAAATTCCTCTAAGTGTAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| 3UTR-3UTR GCA 90 bp | TTAAAGGAGCTCTGTATAAATGAAGTTCAGCTACCACCAATAAAGCAGATACTGCTACTGCTGGGAGACTaGAAGAGACTCCCAAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LKELCINEVQLPPIKQILLLLGD*KRLPKL Trigger: CAGCTTTGGGAGTCTCTTGCAGTCTCCCAGCAGTAG...CAGTATCTGCTTTATTGGTGGTAGCTGAACTTCATTTATACAGAGCTCCTTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| 3UTR-3UTR CCA 90 bp | TTAAAGGAGCTCTGTATAAATGAAGTTCAGCTACCACCAATAAAGCAGATACTGAACTCCCTCTACTGCTaGGAGACTGCAAGAGACTCC | + |
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Preference number: 2 (lower is better) Translates to: LKELCINEVQLPPIKQILNSLYC*ETARDS Trigger: GGAGTCTCTTGCAGTCTCCCAGCAGTAGAGGGAGTT...CAGTATCTGCTTTATTGGTGGTAGCTGAACTTCATTTATACAGAGCTCCTTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| 3UTR CCA 72 bp | AGCTTCAGTGTTTCATTTGTACACCATCCTTGTCACTaGCACCCCTGCTGTGATGGGTACCTGGCAGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: SFSVSFVHHPCH*HPCCDGYLAAS Trigger: GGAAGCTGCCAGGTACCCATCACAGCAGGGGTGCCAGTGACAAGGATGGTGTACAAATGAAACACTGAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| 3UTR CCA 72 bp | ATCCTTGTCACTGGCACCCCTGCTGTGATGGGTACCTaGCAGCTTCCAAAATCCAAACTCTCTGCAAGAGTT | + |
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Preference number: 3 (lower is better) Translates to: ILVTGTPAVMGT*QLPKSKLSARV Trigger: AACTCTTGCAGAGAGTTTGGATTTTGGAAGCTGCCAGGTACCCATCACAGCAGGGGTGCCAGTGACAAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| 3UTR TCA 72 bp | ATTTGTACACCATCCTTGTCACTGGCACCCCTGCTGTaGTGGGTACCTGGCAGCTTCCAAAATCCAAACTCT | + |
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Preference number: 3 (lower is better) Translates to: ICTPSLSLAPLL*WVPGSFQNPNS Trigger: AGAGTTTGGATTTTGGAAGCTGCCAGGTACCCATCACAGCAGGGGTGCCAGTGACAAGGATGGTGTACAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| 3UTR-3UTR CAA 90 bp | GATGGGTACCTGGCAGCTTCCAAAATCCAAACTCTCTGCAAGAGTTCAGAAGGCGTCCCCAAACTTATTTaGACAATTCAAGTGCCATTC | + |
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Preference number: 3 (lower is better) Translates to: DGYLAASKIQTLCKSSEGVPKLI*TIQVPF Trigger: GAATGGCACTTGAATTGTCAAAATAAGTTTGGGGAC...GCCTTCTGAACTCTTGCAGAGAGTTTGGATTTTGGAAGCTGCCAGGTACCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| 3UTR TCA 72 bp | GAAGAAGACAGACAGGTTAAAGGAGCTCTGTATAAATaGAGTTCAGCTACCACCAATAAAGCAGATACTGTC | + |
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Preference number: 3 (lower is better) Translates to: EEDRQVKGALYK*SSATTNKADTV Trigger: GACAGTATCTGCTTTATTGGTGGTAGCTGAACTTCATTTATACAGAGCTCCTTTAACCTGTCTGTCTTCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR TCA 90 bp | CACCCCTGCTGTGATGGGTACCTGGCAGCTTCCAAAATCCAAACTCTCTGCAAGCTGTGTCGTCAGCTGTaGAGTGGATGGGAGAATCCC | + |
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Preference number: 4 (lower is better) Translates to: HPCCDGYLAASKIQTLCKLCRQL*SGWENP Trigger: GGGATTCTCCCATCCACTTCACAGCTGACGACACAG...CTTGCAGAGAGTTTGGATTTTGGAAGCTGCCAGGTACCCATCACAGCAGGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR CCA 90 bp | CACCCCTGCTGTGATGGGTACCTGGCAGCTTCCAAAATCCAAACTCTCTGCAAGGGTCATGACTGTTGTTaGAAGCAGCTCTGGGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: HPCCDGYLAASKIQTLCKGHDCC*KQLWGG Trigger: ACCACCCCAGAGCTGCTTCCAACAACAGTCATGACC...CTTGCAGAGAGTTTGGATTTTGGAAGCTGCCAGGTACCCATCACAGCAGGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR CCA 90 bp | CAACATGCGGCAACTCTAGGAGGACCACTCCAAAATTCTGGTAATAGCTCTGGTGTGGTGGCTAGTGTCTaGGGTGGTGTGGTGGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: QHAATLGGPLQNSGNSSGVVASV*GGVVVG Trigger: CCCAACCACCACACCACCCCAGACACTAGCCACCAC...ACCAGAGCTATTACCAGAATTTTGGAGTGGTCCTCCTAGAGTTGCCGCATGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR TCA 90 bp | TGGATAGCTTCAGTGTTTCATTTGTACACCATCCTTGTCACTGGCACCCCTGCTTGGTCACTGCTGTACTaGAGGCAGTGGTGGCTAGTG | + |
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Preference number: 4 (lower is better) Translates to: WIASVFHLYTILVTGTPAWSLLY*RQWWLV Trigger: CACTAGCCACCACTGCCTTCAGTACAGCAGTGACCA...AGCAGGGGTGCCAGTGACAAGGATGGTGTACAAATGAAACACTGAAGCTATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR GCA 90 bp | CACCCCTGCTGTGATGGGTACCTGGCAGCTTCCAAAATCCAAACTCTCTGCAAGGGAGAAGCTCTGCATTaGACTTGGAATTGGGACATG | + |
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Preference number: 4 (lower is better) Translates to: HPCCDGYLAASKIQTLCKGEALH*TWNWDM Trigger: CATGTCCCAATTCCAAGTGCAATGCAGAGCTTCTCC...CTTGCAGAGAGTTTGGATTTTGGAAGCTGCCAGGTACCCATCACAGCAGGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR CCA 90 bp | CAACATGCGGCAACTCTAGGAGGACCACTCCAAAATTCTGGTAATAGCTCTGGTGTGTCTGGGGTGGTGTaGTGGTTGGGAGAACAGATG | + |
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Preference number: 4 (lower is better) Translates to: QHAATLGGPLQNSGNSSGVSGVV*WLGEQM Trigger: CATCTGTTCTCCCAACCACCACACCACCCCAGACAC...ACCAGAGCTATTACCAGAATTTTGGAGTGGTCCTCCTAGAGTTGCCGCATGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR CCA 90 bp | CAACATGCGGCAACTCTAGGAGGACCACTCCAAAATTCTGGTAATAGCTCTGGTGGGTGGTGTGGTGGTTaGGAGAACAGATGTGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: QHAATLGGPLQNSGNSSGGWCGG*ENRCGH Trigger: ATGACCACATCTGTTCTCCCAACCACCACACCACCC...ACCAGAGCTATTACCAGAATTTTGGAGTGGTCCTCCTAGAGTTGCCGCATGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR TCA 90 bp | TTGGATAGCTTCAGTGTTTCATTTGTACACCATCCTTGTCACTGGCACCCCTGCTGCAGGCAGAGTTTCTaGTTCTGTAGTGAAGGCGGA | + |
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Preference number: 4 (lower is better) Translates to: LDSFSVSFVHHPCHWHPCCRQSF*FCSEGG Trigger: TCCGCCTTCACTACAGAATCAGAAACTCTGCCTGCA...GCAGGGGTGCCAGTGACAAGGATGGTGTACAAATGAAACACTGAAGCTATCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR CCA 90 bp | AAAGGCAGCTTAGATACCAAGAAGAAGACAGACAGGTTAAAGGAGCTCTGTATAGCAGCTCTGGGGTGGTaGTGGTCACATAAGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: KGSLDTKKKTDRLKELCIAALGW*WSHKGW Trigger: CCACCCCTTATGTGACCACCACCACCCCAGAGCTGC...TATACAGAGCTCCTTTAACCTGTCTGTCTTCTTCTTGGTATCTAAGCTGCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR CCA 90 bp | ACGAGGCAGGGAAAATGTGTCTCTAAAGCACCTTCATGTGGGAAGATACAACCATGTTGGAAGCAGCTCTaGGGTGGTGGTGGTCACATA | + |
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Preference number: 4 (lower is better) Translates to: TRQGKCVSKAPSCGKIQPCWKQL*GGGGHI Trigger: TATGTGACCACCACCACCCCAGAGCTGCTTCCAACA...TGGTTGTATCTTCCCACATGAAGGTGCTTTAGAGACACATTTTCCCTGCCTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR TCA 90 bp | ACGAGGCAGGGAAAATGTGTCTCTAAAGCACCTTCATGTGGGAAGATACAACCAAACAGTTGGCTCCTGTaGCTTTCCCTCGAAGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: TRQGKCVSKAPSCGKIQPNSWLL*LSLEGE Trigger: TTCTCCTTCGAGGGAAAGTCACAGGAGCCAACTGTT...TGGTTGTATCTTCCCACATGAAGGTGCTTTAGAGACACATTTTCCCTGCCTCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR GCA 90 bp | TTTTCCCAGCAACATGCGGCAACTCTAGGAGGACCACTCCAAAATTCTGGTAATTGTACGGAGAAGCTCTaGATTGCACTTGGAATTGGG | + |
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Preference number: 4 (lower is better) Translates to: FSQQHAATLGGPLQNSGNCTEKL*IALGIG Trigger: CCCAATTCCAAGTGCAATGCAGAGCTTCTCCGTACA...ATTACCAGAATTTTGGAGTGGTCCTCCTAGAGTTGCCGCATGTTGCTGGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR CCA 90 bp | ACGAGGCAGGGAAAATGTGTCTCTAAAGCACCTTCATGTGGGAAGATACAACCACATTGCACTTGGAATTaGGACATGAACCTTTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: TRQGKCVSKAPSCGKIQPHCTWN*DMNLCP Trigger: GGGGCAAAGGTTCATGTCCCAATTCCAAGTGCAATG...TGGTTGTATCTTCCCACATGAAGGTGCTTTAGAGACACATTTTCCCTGCCTCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR CCA 90 bp | CAACATGCGGCAACTCTAGGAGGACCACTCCAAAATTCTGGTAATAGCTCTGGTGACACTTCACCAAACTaGACCTTCCCCAAAAGTGTA | + |
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Preference number: 4 (lower is better) Translates to: QHAATLGGPLQNSGNSSGDTSPN*TFPKSV Trigger: TACACTTTTGGGGAAGGTCCAGTTTGGTGAAGTGTC...ACCAGAGCTATTACCAGAATTTTGGAGTGGTCCTCCTAGAGTTGCCGCATGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR TCA 90 bp | AACTCCTCACTTGACTGCAGAATTCTCCTAAGGTTAGGGGCTGGAGGCTTATTCTATTATTGTATCCTCTaGGGCAGCTGGTGTCAGATA | + |
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Preference number: 4 (lower is better) Translates to: NSSLDCRILLRLGAGGLFYYCIL*GSWCQI Trigger: TATCTGACACCAGCTGCCTCAGAGGATACAATAATA...GAATAAGCCTCCAGCCCCTAACCTTAGGAGAATTCTGCAGTCAAGTGAGGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR GCA 90 bp | CACCCCTGCTGTGATGGGTACCTGGCAGCTTCCAAAATCCAAACTCTCTGCAAGGATTTAGTTGTCTTCTaGAAAGACTCACTTGTTGTT | + |
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Preference number: 4 (lower is better) Translates to: HPCCDGYLAASKIQTLCKDLVVF*KDSLVV Trigger: AACAACAAGTGAGTCTTTGCAGAAGACAACTAAATC...CTTGCAGAGAGTTTGGATTTTGGAAGCTGCCAGGTACCCATCACAGCAGGGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR CCA 90 bp | GAGCTCTGTATAAATGAAGTTCAGCTACCACCAATAAAGCAGATACTGTCTGAATCTGGGGTGGTGTGGTaGTTGGGAGAACAGATGTGG | + |
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Preference number: 4 (lower is better) Translates to: ELCINEVQLPPIKQILSESGVVW*LGEQMW Trigger: CCACATCTGTTCTCCCAACCACCACACCACCCCAGA...TTCAGACAGTATCTGCTTTATTGGTGGTAGCTGAACTTCATTTATACAGAGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR TCA 90 bp | AAAGGCAGCTTAGATACCAAGAAGAAGACAGACAGGTTAAAGGAGCTCTGTATAGAACAGATGTGGTCATaGCTGTTGTTGGAAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: KGSLDTKKKTDRLKELCIEQMWS*LLLEAA Trigger: AGCTGCTTCCAACAACAGTCATGACCACATCTGTTC...TATACAGAGCTCCTTTAACCTGTCTGTCTTCTTCTTGGTATCTAAGCTGCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR TCA 90 bp | TTTTCCCAGCAACATGCGGCAACTCTAGGAGGACCACTCCAAAATTCTGGTAATTGTCTGCTGTTGATCTaGTGTGATTTAGTTGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: FSQQHAATLGGPLQNSGNCLLLI*CDLVVF Trigger: GAAGACAACTAAATCACATCAGATCAACAGCAGACA...ATTACCAGAATTTTGGAGTGGTCCTCCTAGAGTTGCCGCATGTTGCTGGGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| 3UTR CAA 72 bp | TTAGAGGAATTTATTTGGATAGCTTCAGTGTTTCATTaGTACACCATCCTTGTCACTGGCACCCCTGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: LEEFIWIASVFH*YTILVTGTPAV Trigger: CACAGCAGGGGTGCCAGTGACAAGGATGGTGTACAAATGAAACACTGAAGCTATCCAAATAAATTCCTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR TCA 90 bp | AAAACAAAAGGCAGCTTAGATACCAAGAAGAAGACAGACAGGTTAAAGGAGCTCTTTTGTGGTTTCTTGTaGGAAGGAGCCAGGTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: KTKGSLDTKKKTDRLKELFCGFL*EGARCC Trigger: ACAACACCTGGCTCCTTCTCACAAGAAACCACAAAA...GAGCTCCTTTAACCTGTCTGTCTTCTTCTTGGTATCTAAGCTGCCTTTTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR CCA 90 bp | AGGACCCACAGCATCAGTAAACAGAGTGAGACTTTAAACGGAAATTACAATGTCGATTGGTGTTTGAGATaGTCAAGGACACTTCACCAA | + |
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Preference number: 4 (lower is better) Translates to: RTHSISKQSETLNGNYNVDWCLR*SRTLHQ Trigger: TTGGTGAAGTGTCCTTGACCATCTCAAACACCAATC...GACATTGTAATTTCCGTTTAAAGTCTCACTCTGTTTACTGATGCTGTGGGTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR TCA 90 bp | GAGCTCTGTATAAATGAAGTTCAGCTACCACCAATAAAGCAGATACTGTCTGAAGCTGTTGATCTGATGTaGTTTAGTTGTCTTCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: ELCINEVQLPPIKQILSEAVDLM*FSCLLQ Trigger: TTGCAGAAGACAACTAAATCACATCAGATCAACAGC...TTCAGACAGTATCTGCTTTATTGGTGGTAGCTGAACTTCATTTATACAGAGCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS TCA 90 bp | AGAAGGAGCCAGGTGTTGTTGAGGGGCACGTGGTCACTGCTGTACTaGAGGCAGTGGTGGCTAGTGTCTGGGGTGGTGTGGTGGTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: RRSQVLLRGTWSLLY*RQWWLVSGVVWWLG Trigger: TCCCAACCACCACACCACCCCAGACACTAGCCACCACTGCCTTCAGTACAGCAGTGACCACGTGCCCCTCAACAACACCTGGCTCCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS CCA 90 bp | GGGCACGTGGTCACTGCTGTACTGAAGGCAGTGGTGGCTAGTGTCTaGGGTGGTGTGGTGGTTGGGAGAACAGATGTGGTCATGACTGTT | + |
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Preference number: 5 (lower is better) Translates to: GHVVTAVLKAVVASV*GGVVVGRTDVVMTV Trigger: AACAGTCATGACCACATCTGTTCTCCCAACCACCACACCACCCCAGACACTAGCCACCACTGCCTTCAGTACAGCAGTGACCACGTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS TCA 90 bp | CTAGTGTCTGGGGTGGTGTGGTGGTTGGGAGAACAGATGTGGTCATaGCTGTTGTTGGAAGCAGCTCTGGGGTGGTGGTGGTCACATAAG | + |
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Preference number: 5 (lower is better) Translates to: LVSGVVWWLGEQMWS*LLLEAALGWWWSHK Trigger: CTTATGTGACCACCACCACCCCAGAGCTGCTTCCAACAACAGTCATGACCACATCTGTTCTCCCAACCACCACACCACCCCAGACACTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS TCA 90 bp | AGGCAAAGTCACCGGCTGGCCCAAAAACCCTATTATTGTATCCTCTaGGGCAGCTGGTGTCAGATAAAGCCACCAGAGCTCCGTCACCAG | + |
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Preference number: 5 (lower is better) Translates to: RQSHRLAQKPYYCIL*GSWCQIKPPELRHQ Trigger: CTGGTGACGGAGCTCTGGTGGCTTTATCTGACACCAGCTGCCTCAGAGGATACAATAATAGGGTTTTTGGGCCAGCCGGTGACTTTGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS TCA 90 bp | TCCATCTGTACGGAGAAGCTCTGCATTGCACTTGGAATTGGGACATaGACCTTTGCCCCAGCACATACTGTTGCGGCTCTGGGACCACGA | + |
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Preference number: 5 (lower is better) Translates to: SICTEKLCIALGIGT*TFAPAHTVAALGPR Trigger: TCGTGGTCCCAGAGCCGCAACAGTATGTGCTGGGGCAAAGGTTCATGTCCCAATTCCAAGTGCAATGCAGAGCTTCTCCGTACAGATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS GCA 90 bp | TGCACTTGGAATTGGGACATGAACCTTTGCCCCAGCACATACTGTTaGGGCTCTGGGACCACGAGAGGTAATGACAAGGCAAAGTCACCG | + |
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Preference number: 5 (lower is better) Translates to: CTWNWDMNLCPSTYC*GSGTTRGNDKAKSP Trigger: CGGTGACTTTGCCTTGTCATTACCTCTCGTGGTCCCAGAGCCGCAACAGTATGTGCTGGGGCAAAGGTTCATGTCCCAATTCCAAGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS CCA 90 bp | CAGGCACCTCTATACGGCAGCAGTACACCCCACTGTCACCTCGATTaGTGTTTGAGATGGTCAAGGACACTTCACCAAACTGGACCTTCC | + |
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Preference number: 5 (lower is better) Translates to: QAPLYGSSTPHCHLD*CLRWSRTLHQTGPS Trigger: GGAAGGTCCAGTTTGGTGAAGTGTCCTTGACCATCTCAAACACCAATCGAGGTGACAGTGGGGTGTACTGCTGCCGTATAGAGGTGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS CCA 90 bp | TTCTTGTTCCATCTGTACGGAGAAGCTCTGCATTGCACTTGGAATTaGGACATGAACCTTTGCCCCAGCACATACTGTTGCGGCTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: FLFHLYGEALHCTWN*DMNLCPSTYCCGSG Trigger: CCCAGAGCCGCAACAGTATGTGCTGGGGCAAAGGTTCATGTCCCAATTCCAAGTGCAATGCAGAGCTTCTCCGTACAGATGGAACAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR CAA 90 bp | GATAGCTTCAGTGTTTCATTTGTACACCATCCTTGTCACTGGCACCCCTGCTGTCCACTGTCACCTCGATaGGTGTTTGAGATGGTCAAG | + |
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Preference number: 5 (lower is better) Translates to: DSFSVSFVHHPCHWHPCCPLSPR*VFEMVK Trigger: CTTGACCATCTCAAACACCAATCGAGGTGACAGTGG...ACAGCAGGGGTGCCAGTGACAAGGATGGTGTACAAATGAAACACTGAAGCTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR CAA 90 bp | GATGGGTACCTGGCAGCTTCCAAAATCCAAACTCTCTGCAAGAGTTCAGAAGGCTTCTTCTTGACATCATaGAACCAGCCAGGCACCTCT | + |
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Preference number: 5 (lower is better) Translates to: DGYLAASKIQTLCKSSEGFFLTS*NQPGTS Trigger: AGAGGTGCCTGGCTGGTTCAATGATGTCAAGAAGAA...GCCTTCTGAACTCTTGCAGAGAGTTTGGATTTTGGAAGCTGCCAGGTACCCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS TCA 90 bp | CAGTGTTGTCTGGCCTCTTGTGTCTCTGCAAACAGTTGGCTCCTGTaGCTTTCCCTCGAAGGAGAAACGCCAGAAACAATAACACCATTA | + |
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Preference number: 5 (lower is better) Translates to: QCCLASCVSANSWLL*LSLEGETPETITPL Trigger: TAATGGTGTTATTGTTTCTGGCGTTTCTCCTTCGAGGGAAAGTCACAGGAGCCAACTGTTTGCAGAGACACAAGAGGCCAGACAACACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR CAA 90 bp | GATGGGTACCTGGCAGCTTCCAAAATCCAAACTCTCTGCAAGAGTTCAGAAGGCCCAAAAACCCTATTATaGTATCCTCTGAGGCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: DGYLAASKIQTLCKSSEGPKTLL*YPLRQL Trigger: CAGCTGCCTCAGAGGATACAATAATAGGGTTTTTGG...GCCTTCTGAACTCTTGCAGAGAGTTTGGATTTTGGAAGCTGCCAGGTACCCATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR CAA 90 bp | TTTTCCCAGCAACATGCGGCAACTCTAGGAGGACCACTCCAAAATTCTGGTAATCGGAGAAGCTCTGCATaGCACTTGGAATTGGGACAT | + |
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Preference number: 5 (lower is better) Translates to: FSQQHAATLGGPLQNSGNRRSSA*HLELGH Trigger: ATGTCCCAATTCCAAGTGCAATGCAGAGCTTCTCCG...ATTACCAGAATTTTGGAGTGGTCCTCCTAGAGTTGCCGCATGTTGCTGGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR CAA 90 bp | CAACATGCGGCAACTCTAGGAGGACCACTCCAAAATTCTGGTAATAGCTCTGGTTCACTATCTTCAGTGTaGTCTGGCCTCTTGTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: QHAATLGGPLQNSGNSSGSLSSV*SGLLCL Trigger: GAGACACAAGAGGCCAGACAACACTGAAGATAGTGA...ACCAGAGCTATTACCAGAATTTTGGAGTGGTCCTCCTAGAGTTGCCGCATGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR CAA 90 bp | TGGATAGCTTCAGTGTTTCATTTGTACACCATCCTTGTCACTGGCACCCCTGCTGTTGTTGTTGGTTTTTaGGTTGTTGTGGCTCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: WIASVFHLYTILVTGTPAVVVGF*VVVALL Trigger: GAGGAGAGCCACAACAACCAAAAAACCAACAACAAC...AGCAGGGGTGCCAGTGACAAGGATGGTGTACAAATGAAACACTGAAGCTATCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR CAA 90 bp | AGGACCCACAGCATCAGTAAACAGAGTGAGACTTTAAACGGAAATTACAATGTCCACCTCGATTGGTGTTaGAGATGGTCAAGGACACTT | + |
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Preference number: 5 (lower is better) Translates to: RTHSISKQSETLNGNYNVHLDWC*RWSRTL Trigger: AAGTGTCCTTGACCATCTCAAACACCAATCGAGGTG...GACATTGTAATTTCCGTTTAAAGTCTCACTCTGTTTACTGATGCTGTGGGTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR CAA 90 bp | ACGAGGCAGGGAAAATGTGTCTCTAAAGCACCTTCATGTGGGAAGATACAACCACACTTGTTGTTAATGTaGTTTTCTGTGTCGTCAGCT | + |
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Preference number: 5 (lower is better) Translates to: TRQGKCVSKAPSCGKIQPHLLLM*FSVSSA Trigger: AGCTGACGACACAGAAAACAACATTAACAACAAGTG...TGGTTGTATCTTCCCACATGAAGGTGCTTTAGAGACACATTTTCCCTGCCTCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS TCA 90 bp | CCCACACAGCAGGCAATGATCAAGATGGTCTGTCTGCTGTTGATCTaGTGTGATTTAGTTGTCTTCTGCAAAGACTCACTTGTTGTTAAT | + |
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Preference number: 5 (lower is better) Translates to: PTQQAMIKMVCLLLI*CDLVVFCKDSLVVN Trigger: ATTAACAACAAGTGAGTCTTTGCAGAAGACAACTAAATCACATCAGATCAACAGCAGACAGACCATCTTGATCATTGCCTGCTGTGTGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR CAA 90 bp | TTAAAGGAGCTCTGTATAAATGAAGTTCAGCTACCACCAATAAAGCAGATACTGTTGGGACATGAACCTTaGCCCCAGCACATACTGTTG | + |
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Preference number: 5 (lower is better) Translates to: LKELCINEVQLPPIKQILLGHEP*PQHILL Trigger: CAACAGTATGTGCTGGGGCAAAGGTTCATGTCCCAA...CAGTATCTGCTTTATTGGTGGTAGCTGAACTTCATTTATACAGAGCTCCTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR CAA 90 bp | TTAAAGGAGCTCTGTATAAATGAAGTTCAGCTACCACCAATAAAGCAGATACTGAGCTCTGCATTGCACTaGGAATTGGGACATGAACCT | + |
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Preference number: 5 (lower is better) Translates to: LKELCINEVQLPPIKQILSSALH*ELGHEP Trigger: AGGTTCATGTCCCAATTCCAAGTGCAATGCAGAGCT...CAGTATCTGCTTTATTGGTGGTAGCTGAACTTCATTTATACAGAGCTCCTTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS-3UTR CAA 90 bp | TTAAAGGAGCTCTGTATAAATGAAGTTCAGCTACCACCAATAAAGCAGATACTGAAGCGCACATTCTTCTaGACATCATTGAACCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: LKELCINEVQLPPIKQILKRTFF*TSLNQP Trigger: TGGCTGGTTCAATGATGTCAAGAAGAATGTGCGCTT...CAGTATCTGCTTTATTGGTGGTAGCTGAACTTCATTTATACAGAGCTCCTTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS TCA 72 bp | CAGGTGTTGTTGAGGGGCACGTGGTCACTGCTGTACTaGAGGCAGTGGTGGCTAGTGTCTGGGGTGGTGTGG | + |
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Preference number: 6 (lower is better) Translates to: QVLLRGTWSLLY*RQWWLVSGVVW Trigger: CCACACCACCCCAGACACTAGCCACCACTGCCTTCAGTACAGCAGTGACCACGTGCCCCTCAACAACACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS TCA 72 bp | GGGGTGGTGTGGTGGTTGGGAGAACAGATGTGGTCATaGCTGTTGTTGGAAGCAGCTCTGGGGTGGTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: GVVWWLGEQMWS*LLLEAALGWWW Trigger: CCACCACCACCCCAGAGCTGCTTCCAACAACAGTCATGACCACATCTGTTCTCCCAACCACCACACCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS CCA 72 bp | GTCACTGCTGTACTGAAGGCAGTGGTGGCTAGTGTCTaGGGTGGTGTGGTGGTTGGGAGAACAGATGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: VTAVLKAVVASV*GGVVVGRTDVV Trigger: GACCACATCTGTTCTCCCAACCACCACACCACCCCAGACACTAGCCACCACTGCCTTCAGTACAGCAGTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS CAA 72 bp | AGCTCTGCATTGCACTTGGAATTGGGACATGAACCTTaGCCCCAGCACATACTGTTGCGGCTCTGGGACCAC | + |
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Preference number: 6 (lower is better) Translates to: SSALHLELGHEP*PQHILLRLWDH Trigger: GTGGTCCCAGAGCCGCAACAGTATGTGCTGGGGCAAAGGTTCATGTCCCAATTCCAAGTGCAATGCAGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS CAA 90 bp | CCAGGCACCTCTATACGGCAGCAGTACACCCCACTGTCACCTCGATaGGTGTTTGAGATGGTCAAGGACACTTCACCAAACTGGACCTTC | + |
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Preference number: 6 (lower is better) Translates to: PGTSIRQQYTPLSPR*VFEMVKDTSPNWTF Trigger: GAAGGTCCAGTTTGGTGAAGTGTCCTTGACCATCTCAAACACCAATCGAGGTGACAGTGGGGTGTACTGCTGCCGTATAGAGGTGCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS TCA 72 bp | CACCGGCTGGCCCAAAAACCCTATTATTGTATCCTCTaGGGCAGCTGGTGTCAGATAAAGCCACCAGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: HRLAQKPYYCIL*GSWCQIKPPEL Trigger: GAGCTCTGGTGGCTTTATCTGACACCAGCTGCCTCAGAGGATACAATAATAGGGTTTTTGGGCCAGCCGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS TCA 72 bp | ACGGAGAAGCTCTGCATTGCACTTGGAATTGGGACATaGACCTTTGCCCCAGCACATACTGTTGCGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: TEKLCIALGIGT*TFAPAHTVAAL Trigger: CAGAGCCGCAACAGTATGTGCTGGGGCAAAGGTTCATGTCCCAATTCCAAGTGCAATGCAGAGCTTCTCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS GCA 72 bp | AATTGGGACATGAACCTTTGCCCCAGCACATACTGTTaGGGCTCTGGGACCACGAGAGGTAATGACAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: NWDMNLCPSTYC*GSGTTRGNDKA Trigger: TGCCTTGTCATTACCTCTCGTGGTCCCAGAGCCGCAACAGTATGTGCTGGGGCAAAGGTTCATGTCCCAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS CAA 72 bp | GGCAGCAGTACACCCCACTGTCACCTCGATTGGTGTTaGAGATGGTCAAGGACACTTCACCAAACTGGACCT | + |
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Preference number: 6 (lower is better) Translates to: GSSTPHCHLDWC*RWSRTLHQTGP Trigger: AGGTCCAGTTTGGTGAAGTGTCCTTGACCATCTCAAACACCAATCGAGGTGACAGTGGGGTGTACTGCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS CAA 90 bp | CCTCTATACGGCAGCAGTACACCCCACTGTCACCTCGATTGGTGTTaGAGATGGTCAAGGACACTTCACCAAACTGGACCTTCCCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: PLYGSSTPHCHLDWC*RWSRTLHQTGPSPK Trigger: TTTTGGGGAAGGTCCAGTTTGGTGAAGTGTCCTTGACCATCTCAAACACCAATCGAGGTGACAGTGGGGTGTACTGCTGCCGTATAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS TCA 72 bp | GCAGCAGTACACCCCACTGTCACCTCGATTGGTGTTTaGGATGGTCAAGGACACTTCACCAAACTGGACCTT | + |
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Preference number: 6 (lower is better) Translates to: AAVHPTVTSIGV*DGQGHFTKLDL Trigger: AAGGTCCAGTTTGGTGAAGTGTCCTTGACCATCTCAAACACCAATCGAGGTGACAGTGGGGTGTACTGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS CCA 72 bp | AGTACACCCCACTGTCACCTCGATTGGTGTTTGAGATaGTCAAGGACACTTCACCAAACTGGACCTTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: STPHCHLDWCLR*SRTLHQTGPSP Trigger: TGGGGAAGGTCCAGTTTGGTGAAGTGTCCTTGACCATCTCAAACACCAATCGAGGTGACAGTGGGGTGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS CAA 90 bp | ATTCTTGTTCCATCTGTACGGAGAAGCTCTGCATTGCACTTGGAATaGGGACATGAACCTTTGCCCCAGCACATACTGTTGCGGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: ILVPSVRRSSALHLE*GHEPLPQHILLRLW Trigger: CCAGAGCCGCAACAGTATGTGCTGGGGCAAAGGTTCATGTCCCAATTCCAAGTGCAATGCAGAGCTTCTCCGTACAGATGGAACAAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS CCA 72 bp | CATCTGTACGGAGAAGCTCTGCATTGCACTTGGAATTaGGACATGAACCTTTGCCCCAGCACATACTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: HLYGEALHCTWN*DMNLCPSTYCC Trigger: GCAACAGTATGTGCTGGGGCAAAGGTTCATGTCCCAATTCCAAGTGCAATGCAGAGCTTCTCCGTACAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS CAA 72 bp | AAGGCAAAGTCACCGGCTGGCCCAAAAACCCTATTATaGTATCCTCTGAGGCAGCTGGTGTCAGATAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: KAKSPAGPKTLL*YPLRQLVSDKA Trigger: GGCTTTATCTGACACCAGCTGCCTCAGAGGATACAATAATAGGGTTTTTGGGCCAGCCGGTGACTTTGCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS CAA 72 bp | CCATCTGTACGGAGAAGCTCTGCATTGCACTTGGAATaGGGACATGAACCTTTGCCCCAGCACATACTGTTG | + |
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Preference number: 6 (lower is better) Translates to: PSVRRSSALHLE*GHEPLPQHILL Trigger: CAACAGTATGTGCTGGGGCAAAGGTTCATGTCCCAATTCCAAGTGCAATGCAGAGCTTCTCCGTACAGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS CAA 72 bp | TCTATACGGCAGCAGTACACCCCACTGTCACCTCGATaGGTGTTTGAGATGGTCAAGGACACTTCACCAAAC | + |
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Preference number: 6 (lower is better) Translates to: SIRQQYTPLSPR*VFEMVKDTSPN Trigger: GTTTGGTGAAGTGTCCTTGACCATCTCAAACACCAATCGAGGTGACAGTGGGGTGTACTGCTGCCGTATAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS CAA 90 bp | GAGATGATTCTTGTTCCATCTGTACGGAGAAGCTCTGCATTGCACTaGGAATTGGGACATGAACCTTTGCCCCAGCACATACTGTTGCGG | + |
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Preference number: 6 (lower is better) Translates to: EMILVPSVRRSSALH*ELGHEPLPQHILLR Trigger: CCGCAACAGTATGTGCTGGGGCAAAGGTTCATGTCCCAATTCCAAGTGCAATGCAGAGCTTCTCCGTACAGATGGAACAAGAATCATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS CAA 90 bp | TTCCTGGAGATGATTCTTGTTCCATCTGTACGGAGAAGCTCTGCATaGCACTTGGAATTGGGACATGAACCTTTGCCCCAGCACATACTG | + |
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Preference number: 6 (lower is better) Translates to: FLEMILVPSVRRSSA*HLELGHEPLPQHIL Trigger: CAGTATGTGCTGGGGCAAAGGTTCATGTCCCAATTCCAAGTGCAATGCAGAGCTTCTCCGTACAGATGGAACAAGAATCATCTCCAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS CAA 90 bp | TCACTATCTTCAGTGTTGTCTGGCCTCTTGTGTCTCTGCAAACAGTaGGCTCCTGTGACTTTCCCTCGAAGGAGAAACGCCAGAAACAAT | + |
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Preference number: 6 (lower is better) Translates to: SLSSVLSGLLCLCKQ*APVTFPRRRNARNN Trigger: ATTGTTTCTGGCGTTTCTCCTTCGAGGGAAAGTCACAGGAGCCAACTGTTTGCAGAGACACAAGAGGCCAGACAACACTGAAGATAGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS TCA 72 bp | GCTTCTTTGAGAGTGATTGGATGCAGGCAGAGTTTCTaGTTCTGTAGTGAAGGCGGACCCTTTTGTGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: ASLRVIGCRQSF*FCSEGGPFCGF Trigger: GAAACCACAAAAGGGTCCGCCTTCACTACAGAATCAGAAACTCTGCCTGCATCCAATCACTCTCAAAGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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| CDS CAA 72 bp | ATGATTCTTGTTCCATCTGTACGGAGAAGCTCTGCATaGCACTTGGAATTGGGACATGAACCTTTGCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: MILVPSVRRSSA*HLELGHEPLPQ Trigger: CTGGGGCAAAGGTTCATGTCCCAATTCCAAGTGCAATGCAGAGCTTCTCCGTACAGATGGAACAAGAATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068877.7 |
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