RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TIGD5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000103906

Ensembl transcript IDs: ENSMUST00000192937.2

Found 215 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAAGCCTCTGGAGGACAGCTGCTGGCGTCAAGATGCTCTTGTGGATaGATTCAGAAGAGGCTAAGTTGTGGGCCAGGTCACGGCTGGGCT +
Preference number: 1 (lower is better)
Translates to: QASGGQLLASRCSCG*IQKRLSCGPGHGWA
Trigger: AGCCCAGCCGTGACCTGGCCCACAACTTAGCCTCTTCTGAATGCATCCACAAGAGCATCTTGACGCCAGCAGCTGTCCTCCAGAGGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CCA 90 bp CCCACAAGCCTCTGGAGGACAGCTGCTGGCGTCAAGATGCTCTTGTaGATGCATTCAGAAGAGGCTAAGTTGTGGGCCAGGTCACGGCTG +
Preference number: 1 (lower is better)
Translates to: PTSLWRTAAGVKMLL*MHSEEAKLWARSRL
Trigger: CAGCCGTGACCTGGCCCACAACTTAGCCTCTTCTGAATGCATCCACAAGAGCATCTTGACGCCAGCAGCTGTCCTCCAGAGGCTTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR GCA 90 bp ACAGGAAGCCCACAAGCCTCTGGAGGACAGCTGCTGGCGTCAAGATaGTCTTGTGGATGCATTCAGAAGAGGCTAAGTTGTGGGCCAGGT +
Preference number: 1 (lower is better)
Translates to: TGSPQASGGQLLASR*SCGCIQKRLSCGPG
Trigger: ACCTGGCCCACAACTTAGCCTCTTCTGAATGCATCCACAAGAGCATCTTGACGCCAGCAGCTGTCCTCCAGAGGCTTGTGGGCTTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CCA 90 bp AGAAAAGGCTGCCTGTACTTCCCAAGCCAAAGGATCACCACACTTTaGGGAACAGGCCGAGCTCTGGGGGCAAGTGAACTGGGATTCCTG +
Preference number: 1 (lower is better)
Translates to: RKGCLYFPSQRITTL*GTGRALGASELGFL
Trigger: CAGGAATCCCAGTTCACTTGCCCCCAGAGCTCGGCCTGTTCCCCAAAGTGTGGTGATCCTTTGGCTTGGGAAGTACAGGCAGCCTTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CCA 90 bp CTTTATTACACGGGCCAGGTGAATTCAGCTGTGAGCAGGGCTGAGTaGCAGAGAGAGGGCCCTACAATAGGACAGGAAGCCCACAAGCCT +
Preference number: 1 (lower is better)
Translates to: LYYTGQVNSAVSRAE*QREGPTIGQEAHKP
Trigger: AGGCTTGTGGGCTTCCTGTCCTATTGTAGGGCCCTCTCTCTGCCACTCAGCCCTGCTCACAGCTGAATTCACCTGGCCCGTGTAATAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR TCA 90 bp GGGGTCTTACTCCTGAGCCCTAGTCTCTGCCAACTCCAGTCTACCTaGGCCCAGGCCAGATCGGAACCTCTTCAAAAGAACAGTACATGT +
Preference number: 1 (lower is better)
Translates to: GVLLLSPSLCQLQST*AQARSEPLQKNSTC
Trigger: ACATGTACTGTTCTTTTGAAGAGGTTCCGATCTGGCCTGGGCTCAGGTAGACTGGAGTTGGCAGAGACTAGGGCTCAGGAGTAAGACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR TCA 90 bp GCCTTGAGTGTACCTCCAAGGCCCAGATCTGGCTCTCTGCAGATTTaGAAGCAGGTCTGTCAAAGCTGGATGGTAGTTCCTAACCTGGGT +
Preference number: 1 (lower is better)
Translates to: ALSVPPRPRSGSLQI*KQVCQSWMVVPNLG
Trigger: ACCCAGGTTAGGAACTACCATCCAGCTTTGACAGACCTGCTTTCAAATCTGCAGAGAGCCAGATCTGGGCCTTGGAGGTACACTCAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR GCA 90 bp GAACACAAACCTGACAGGAACCCTGTCACTCAGCCAGGCCGTACTTaGTTGTTTATAAGGCAGCAGCAATATGAGGTCATAACCTCCTGG +
Preference number: 1 (lower is better)
Translates to: EHKPDRNPVTQPGRT*LFIRQQQYEVITSW
Trigger: CCAGGAGGTTATGACCTCATATTGCTGCTGCCTTATAAACAAGCAAGTACGGCCTGGCTGAGTGACAGGGTTCCTGTCAGGTTTGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR GCA 90 bp AGACAGTCTGTTTATGAATCCAAGGTAGAACCTAGCAGAAAAGGCTaGCTGTACTTCCCAAGCCAAAGGATCACCACACTTTGGGGAACA +
Preference number: 1 (lower is better)
Translates to: RQSVYESKVEPSRKG*LYFPSQRITTLWGT
Trigger: TGTTCCCCAAAGTGTGGTGATCCTTTGGCTTGGGAAGTACAGGCAGCCTTTTCTGCTAGGTTCTACCTTGGATTCATAAACAGACTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR GCA 90 bp GATCAGACTGCCCTGGAGCTAAACAAAGTGCTTTGTGGTTTGTCCTaGCCATTGATCCAAACACTTGCTAACCTCATGAATAGAAGACCT +
Preference number: 1 (lower is better)
Translates to: DQTALELNKVLCGLS*PLIQTLANLMNRRP
Trigger: AGGTCTTCTATTCATGAGGTTAGCAAGTGTTTGGATCAATGGGCAGGACAAACCACAAAGCACTTTGTTTAGCTCCAGGGCAGTCTGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR TCA 90 bp GTTGCTCTATGCTTTCCCTCAGCTTTTGATATTTATGCAGATTTTTaGCTGGGATGTAGTCGTGGCTCCAAGGAACTATATTCTTGGGCC +
Preference number: 1 (lower is better)
Translates to: VALCFPSAFDIYADF*LGCSRGSKELYSWA
Trigger: GGCCCAAGAATATAGTTCCTTGGAGCCACGACTACATCCCAGTCAAAAATCTGCATAAATATCAAAAGCTGAGGGAAAGCATAGAGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR GCA 90 bp GCTGTTCGGCACTGTAAGCCTCAGAGCTATAGGACTCCCTGCTGGACAACCTGGCCTGGAGAAGGCTGGTaGAGGAAGAGCCCATGGGGC +
Preference number: 2 (lower is better)
Translates to: AVRHCKPQSYRTPCWTTWPGEGW*RKSPWG
Trigger: GCCCCATGGGCTCTTCCTGCACCAGCCTTCTCCAGG...CCAGGTTGTCCAGCAGGGAGTCCTATAGCTCTGAGGCTTACAGTGCCGAACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CAA 90 bp CAGGCACCGGGCTCACCAGGGACTGGATGGAGCCTAGCCTGGGCTTaGATCCAGCACCATAAGGACCTGAGTTATCAGAGCAAGGGCAAG +
Preference number: 2 (lower is better)
Translates to: QAPGSPGTGWSLAWA*IQHHKDLSYQSKGK
Trigger: CTTGCCCTTGCTCTGATAACTCAGGTCCTTATGGTGCTGGATCAAAGCCCAGGCTAGGCTCCATCCAGTCCCTGGTGAGCCCGGTGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR TCA 90 bp CATTCAGAAGAGGCTAAGTTGTGGGCCAGGTCACGGCTGGGCTTCCCACAGGCACCCCCTCTCTCCCAGTaGGGCAGGAAAAAGACCACT +
Preference number: 2 (lower is better)
Translates to: HSEEAKLWARSRLGFPQAPPLSQ*GRKKTT
Trigger: AGTGGTCTTTTTCCTGCCTCACTGGGAGAGAGGGGG...TGCCTGTGGGAAGCCCAGCCGTGACCTGGCCCACAACTTAGCCTCTTCTGAATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR TCA 90 bp ATTCAGAAGAGGCTAAGTTGTGGGCCAGGTCACGGCTGGGCTTCCCACAGGCAAGCTTCCCCACTGAGATaGGACCAGGTAGCACCAGGG +
Preference number: 2 (lower is better)
Translates to: IQKRLSCGPGHGWASHRQASPLR*DQVAPG
Trigger: CCCTGGTGCTACCTGGTCTCATCTCAGTGGGGAAGC...TTGCCTGTGGGAAGCCCAGCCGTGACCTGGCCCACAACTTAGCCTCTTCTGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR CCA 90 bp CATTCAGAAGAGGCTAAGTTGTGGGCCAGGTCACGGCTGGGCTTCCCACAGGCAGAGGCCTCTGTGCACTaGGCTGTTCGGCACTGTAAG +
Preference number: 2 (lower is better)
Translates to: HSEEAKLWARSRLGFPQAEASVH*AVRHCK
Trigger: CTTACAGTGCCGAACAGCCCAGTGCACAGAGGCCTC...TGCCTGTGGGAAGCCCAGCCGTGACCTGGCCCACAACTTAGCCTCTTCTGAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR TCA 90 bp GCTGTTCGGCACTGTAAGCCTCAGAGCTATAGGACTCCCTGCTGGACAACCTGGCACCAGGGAAGCAGATaGAACAGCAGCAGCCTCAGG +
Preference number: 2 (lower is better)
Translates to: AVRHCKPQSYRTPCWTTWHQGSR*NSSSLR
Trigger: CCTGAGGCTGCTGCTGTTTCATCTGCTTCCCTGGTG...CCAGGTTGTCCAGCAGGGAGTCCTATAGCTCTGAGGCTTACAGTGCCGAACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR TCA 90 bp CATTCAGAAGAGGCTAAGTTGTGGGCCAGGTCACGGCTGGGCTTCCCACAGGCAGTGAACTGGGATTCCTaGGTGAGGCCTGGTACACAG +
Preference number: 2 (lower is better)
Translates to: HSEEAKLWARSRLGFPQAVNWDS*VRPGTQ
Trigger: CTGTGTACCAGGCCTCACTCAGGAATCCCAGTTCAC...TGCCTGTGGGAAGCCCAGCCGTGACCTGGCCCACAACTTAGCCTCTTCTGAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR GCA 90 bp ATTCAGAAGAGGCTAAGTTGTGGGCCAGGTCACGGCTGGGCTTCCCACAGGCAAGGCTCAGTGTCCCACTaGTGGTGGCACCAACAAACC +
Preference number: 2 (lower is better)
Translates to: IQKRLSCGPGHGWASHRQGSVSH*WWHQQT
Trigger: GGTTTGTTGGTGCCACCAGCAGTGGGACACTGAGCC...TTGCCTGTGGGAAGCCCAGCCGTGACCTGGCCCACAACTTAGCCTCTTCTGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR CCA 90 bp CACTGGGCTGTTCGGCACTGTAAGCCTCAGAGCTATAGGACTCCCTGCTGGACAAGAACTCCTCCAAACTaGGCTGGGCTTGCATCCCCG +
Preference number: 2 (lower is better)
Translates to: HWAVRHCKPQSYRTPCWTRTPPN*AGLASP
Trigger: CGGGGATGCAAGCCCAGCCCAGTTTGGAGGAGTTCT...TGTCCAGCAGGGAGTCCTATAGCTCTGAGGCTTACAGTGCCGAACAGCCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CAA 90 bp AAGCCCACAAGCCTCTGGAGGACAGCTGCTGGCGTCAAGATGCTCTaGTGGATGCATTCAGAAGAGGCTAAGTTGTGGGCCAGGTCACGG +
Preference number: 2 (lower is better)
Translates to: KPTSLWRTAAGVKML*WMHSEEAKLWARSR
Trigger: CCGTGACCTGGCCCACAACTTAGCCTCTTCTGAATGCATCCACAAGAGCATCTTGACGCCAGCAGCTGTCCTCCAGAGGCTTGTGGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR TCA 90 bp CATTCAGAAGAGGCTAAGTTGTGGGCCAGGTCACGGCTGGGCTTCCCACAGGCAACCTGGGTATCTGGCTaGTATGGAGGCTGCTGGTAT +
Preference number: 2 (lower is better)
Translates to: HSEEAKLWARSRLGFPQATWVSG*YGGCWY
Trigger: ATACCAGCAGCCTCCATATCAGCCAGATACCCAGGT...TGCCTGTGGGAAGCCCAGCCGTGACCTGGCCCACAACTTAGCCTCTTCTGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR GCA 90 bp GCTGTTCGGCACTGTAAGCCTCAGAGCTATAGGACTCCCTGCTGGACAACCTGGCCTGCAAAGACACAGTaGCCCTCCTTAAGACGCAGG +
Preference number: 2 (lower is better)
Translates to: AVRHCKPQSYRTPCWTTWPAKTQ*PSLRRR
Trigger: CCTGCGTCTTAAGGAGGGGCACTGTGTCTTTGCAGG...CCAGGTTGTCCAGCAGGGAGTCCTATAGCTCTGAGGCTTACAGTGCCGAACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR CCA 90 bp AAGGCCCAGATCTGGCTCTCTGCAGATTTGAAAGCAGGTCTGTCAAAGCTGGATGGGCTCACCAGGGACTaGATGGAGCCTAGCCTGGGC +
Preference number: 2 (lower is better)
Translates to: KAQIWLSADLKAGLSKLDGLTRD*MEPSLG
Trigger: GCCCAGGCTAGGCTCCATCCAGTCCCTGGTGAGCCC...ATCCAGCTTTGACAGACCTGCTTTCAAATCTGCAGAGAGCCAGATCTGGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR TCA 90 bp GCTGGCGTCAAGATGCTCTTGTGGATGCATTCAGAAGAGGCTAAGTTGTGGGCCCAACTCCAGTCTACCTaGGCCCAGGCCAGATCGGAA +
Preference number: 2 (lower is better)
Translates to: AGVKMLLWMHSEEAKLWAQLQST*AQARSE
Trigger: TTCCGATCTGGCCTGGGCTCAGGTAGACTGGAGTTG...GGCCCACAACTTAGCCTCTTCTGAATGCATCCACAAGAGCATCTTGACGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR GCA 90 bp CATTCAGAAGAGGCTAAGTTGTGGGCCAGGTCACGGCTGGGCTTCCCACAGGCATGCATAGATGGAGCCTaGTACCTGAGCTCCAGTTCT +
Preference number: 2 (lower is better)
Translates to: HSEEAKLWARSRLGFPQACIDGA*YLSSSS
Trigger: AGAACTGGAGCTCAGGTAGCAGGCTCCATCTATGCA...TGCCTGTGGGAAGCCCAGCCGTGACCTGGCCCACAACTTAGCCTCTTCTGAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR CCA 90 bp ACAAGGAGGACCGGGACAAAGGCTCTGGATGGAATTCCTGCAAAGACACAGTGCGTTCCTGGAGAAGGCTaGTGCAGGAAGAGCCCATGG +
Preference number: 2 (lower is better)
Translates to: TRRTGTKALDGIPAKTQCVPGEG*CRKSPW
Trigger: CCATGGGCTCTTCCTGCACCAGCCTTCTCCAGGAAC...GCACTGTGTCTTTGCAGGAATTCCATCCAGAGCCTTTGTCCCGGTCCTCCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR CCA 90 bp GCTGTTCGGCACTGTAAGCCTCAGAGCTATAGGACTCCCTGCTGGACAACCTGGTCCAGCCATAGTTCCTaGAGAAGGCTGGTGCAGGAA +
Preference number: 2 (lower is better)
Translates to: AVRHCKPQSYRTPCWTTWSSHSS*RRLVQE
Trigger: TTCCTGCACCAGCCTTCTCCAGGAACTATGGCTGGA...CCAGGTTGTCCAGCAGGGAGTCCTATAGCTCTGAGGCTTACAGTGCCGAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR GCA 90 bp GGGGCAAGTGAACTGGGATTCCTGAGTGAGGCCTGGTACACAGCAGGTGGCAATTCTGGATGGAATTCCTaGAAAGACACAGTGCCCCTC +
Preference number: 2 (lower is better)
Translates to: GASELGFLSEAWYTAGGNSGWNS*KDTVPL
Trigger: GAGGGGCACTGTGTCTTTGCAGGAATTCCATCCAGA...ATTGCCACCTGCTGTGTACCAGGCCTCACTCAGGAATCCCAGTTCACTTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR GCA 90 bp ATTCAGAAGAGGCTAAGTTGTGGGCCAGGTCACGGCTGGGCTTCCCACAGGCAAAACCTCATTAGTTCATaGAGCTCAGTGCCTGCCCAC +
Preference number: 2 (lower is better)
Translates to: IQKRLSCGPGHGWASHRQNLISS*SSVPAH
Trigger: GTGGGCAGGCACTGAGCTGCATGAACTAATGAGGTT...TTGCCTGTGGGAAGCCCAGCCGTGACCTGGCCCACAACTTAGCCTCTTCTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR CCA 90 bp ATTCAGAAGAGGCTAAGTTGTGGGCCAGGTCACGGCTGGGCTTCCCACAGGCAACCAGACCCTGTGGATTaGGGCAGTACATCCTTTACT +
Preference number: 2 (lower is better)
Translates to: IQKRLSCGPGHGWASHRQPDPVD*GSTSFT
Trigger: AGTAAAGGATGTACTGCCCCAATCCACAGGGTCTGG...TTGCCTGTGGGAAGCCCAGCCGTGACCTGGCCCACAACTTAGCCTCTTCTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR GCA 90 bp AGCCTTGAGTGTACCTCCAAGGCCCAGATCTGGCTCTCTGCAGATTTGAAAGCAATGGCAGACTGTATGTaGCCCCTCTCTCCCAGTGAG +
Preference number: 2 (lower is better)
Translates to: SLECTSKAQIWLSADLKAMADCM*PLSPSE
Trigger: CTCACTGGGAGAGAGGGGGCACATACAGTCTGCCAT...TGCTTTCAAATCTGCAGAGAGCCAGATCTGGGCCTTGGAGGTACACTCAAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CAA 90 bp CACAAACCTGACAGGAACCCTGTCACTCAGCCAGGCCGTACTTGCTaGTTTATAAGGCAGCAGCAATATGAGGTCATAACCTCCTGGGCC +
Preference number: 2 (lower is better)
Translates to: HKPDRNPVTQPGRTC*FIRQQQYEVITSWA
Trigger: GGCCCAGGAGGTTATGACCTCATATTGCTGCTGCCTTATAAACAAGCAAGTACGGCCTGGCTGAGTGACAGGGTTCCTGTCAGGTTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR TCA 90 bp GCTGGCGTCAAGATGCTCTTGTGGATGCATTCAGAAGAGGCTAAGTTGTGGGCCACATGTAACCTAGGCTaGAGAGCAGCTACTAGAAGC +
Preference number: 2 (lower is better)
Translates to: AGVKMLLWMHSEEAKLWATCNLG*RAATRS
Trigger: GCTTCTAGTAGCTGCTCTTCAGCCTAGGTTACATGT...GGCCCACAACTTAGCCTCTTCTGAATGCATCCACAAGAGCATCTTGACGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR TCA 90 bp CCTAGCAGAAAAGGCTGCCTGTACTTCCCAAGCCAAAGGATCACCACACTTTGGACTACATCCCTAGCCTaGGATGACACCTTTGAGCCT +
Preference number: 2 (lower is better)
Translates to: PSRKGCLYFPSQRITTLWTTSLA*DDTFEP
Trigger: AGGCTCAAAGGTGTCATCTCAGGCTAGGGATGTAGT...CCAAAGTGTGGTGATCCTTTGGCTTGGGAAGTACAGGCAGCCTTTTCTGCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR CCA 90 bp CCTAGCAGAAAAGGCTGCCTGTACTTCCCAAGCCAAAGGATCACCACACTTTGGAGAAAAGGTGGAAGATaGCAGACTGTATGTGCCCCC +
Preference number: 2 (lower is better)
Translates to: PSRKGCLYFPSQRITTLWRKGGR*QTVCAP
Trigger: GGGGGCACATACAGTCTGCCATCTTCCACCTTTTCT...CCAAAGTGTGGTGATCCTTTGGCTTGGGAAGTACAGGCAGCCTTTTCTGCTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR CCA 90 bp CTACCTGAGCCCAGGCCAGATCGGAACCTCTTCAAAAGAACAGTACATGTAACCGTCAGTCAGCACTCATaGGTTCCCCAGGAAGAGCAT +
Preference number: 2 (lower is better)
Translates to: LPEPRPDRNLFKRTVHVTVSQHS*VPQEEH
Trigger: ATGCTCTTCCTGGGGAACCCATGAGTGCTGACTGAC...GGTTACATGTACTGTTCTTTTGAAGAGGTTCCGATCTGGCCTGGGCTCAGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR CCA 90 bp CTACCTGAGCCCAGGCCAGATCGGAACCTCTTCAAAAGAACAGTACATGTAACCCCGGGACAAAGGCTCTaGATGGAATTCCTGCAAAGA +
Preference number: 2 (lower is better)
Translates to: LPEPRPDRNLFKRTVHVTPGQRL*MEFLQR
Trigger: TCTTTGCAGGAATTCCATCCAGAGCCTTTGTCCCGG...GGTTACATGTACTGTTCTTTTGAAGAGGTTCCGATCTGGCCTGGGCTCAGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CAA 90 bp ATCCACAGCTGGGCAGAGCAGCAGATACAAAATGTGGACATTCCTTaGAGCCTTTTCTCCTTCAACCTGGGCTATCCAGCCATAGTTCCT +
Preference number: 2 (lower is better)
Translates to: IHSWAEQQIQNVDIP*SLFSFNLGYPAIVP
Trigger: AGGAACTATGGCTGGATAGCCCAGGTTGAAGGAGAAAAGGCTCAAAGGAATGTCCACATTTTGTATCTGCTGCTCTGCCCAGCTGTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR CCA 90 bp CCTAGCAGAAAAGGCTGCCTGTACTTCCCAAGCCAAAGGATCACCACACTTTGGGACAAAGGCTCTGGATaGAATTCCTGCAAAGACACA +
Preference number: 2 (lower is better)
Translates to: PSRKGCLYFPSQRITTLWDKGSG*NSCKDT
Trigger: TGTGTCTTTGCAGGAATTCCATCCAGAGCCTTTGTC...CCAAAGTGTGGTGATCCTTTGGCTTGGGAAGTACAGGCAGCCTTTTCTGCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR CCA 90 bp AGCCTTGAGTGTACCTCCAAGGCCCAGATCTGGCTCTCTGCAGATTTGAAAGCAATGCAGATTTTTGACTaGGATGTAGTCGTGGCTCCA +
Preference number: 2 (lower is better)
Translates to: SLECTSKAQIWLSADLKAMQIFD*DVVVAP
Trigger: TGGAGCCACGACTACATCCCAGTCAAAAATCTGCAT...TGCTTTCAAATCTGCAGAGAGCCAGATCTGGGCCTTGGAGGTACACTCAAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR CCA 90 bp GTGGCAATGGCTGCTGAAGAAGGGAACTACAGTTTCAACCTCATTAGTTCATGCACCGGGGAGAAAAGGTaGAAGATGGCAGACTGTATG +
Preference number: 2 (lower is better)
Translates to: VAMAAEEGNYSFNLISSCTGEKR*KMADCM
Trigger: CATACAGTCTGCCATCTTCCACCTTTTCTCCCCGGT...GCATGAACTAATGAGGTTGAAACTGTAGTTCCCTTCTTCAGCAGCCATTGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR GCA 90 bp AAGGCCCAGATCTGGCTCTCTGCAGATTTGAAAGCAGGTCTGTCAAAGCTGGATCTTTGTGGTTTGTCCTaGCCATTGATCCAAACACTT +
Preference number: 2 (lower is better)
Translates to: KAQIWLSADLKAGLSKLDLCGLS*PLIQTL
Trigger: AAGTGTTTGGATCAATGGGCAGGACAAACCACAAAG...ATCCAGCTTTGACAGACCTGCTTTCAAATCTGCAGAGAGCCAGATCTGGGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR CCA 90 bp AAGGCCCAGATCTGGCTCTCTGCAGATTTGAAAGCAGGTCTGTCAAAGCTGGATAAACAAAGTGCTTTGTaGTTTGTCCTGCCCATTGAT +
Preference number: 2 (lower is better)
Translates to: KAQIWLSADLKAGLSKLDKQSAL*FVLPID
Trigger: ATCAATGGGCAGGACAAACCACAAAGCACTTTGTTT...ATCCAGCTTTGACAGACCTGCTTTCAAATCTGCAGAGAGCCAGATCTGGGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR CCA 90 bp GTGGCAATGGCTGCTGAAGAAGGGAACTACAGTTTCAACCTCATTAGTTCATGCGCGGTACACCACCAATaGGTGAGTGTATATATATAT +
Preference number: 2 (lower is better)
Translates to: VAMAAEEGNYSFNLISSCAVHHQ*VSVYIY
Trigger: ATATATATATACACTCACCCATTGGTGGTGTACCGC...GCATGAACTAATGAGGTTGAAACTGTAGTTCCCTTCTTCAGCAGCCATTGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR TCA 72 bp CAGGCCGAGCTCTGGGGGCAAGTGAACTGGGATTCCTaGGTGAGGCCTGGTACACAGCAGGTGGCAATGGCT +
Preference number: 3 (lower is better)
Translates to: QAELWGQVNWDS*VRPGTQQVAMA
Trigger: AGCCATTGCCACCTGCTGTGTACCAGGCCTCACTCAGGAATCCCAGTTCACTTGCCCCCAGAGCTCGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR GCA 72 bp CAGAAAGGTGAACTGCCATGGGGGCTGAGGCCTCTGTaGACTGGGCTGTTCGGCACTGTAAGCCTCAGAGCT +
Preference number: 3 (lower is better)
Translates to: QKGELPWGLRPL*TGLFGTVSLRA
Trigger: AGCTCTGAGGCTTACAGTGCCGAACAGCCCAGTGCACAGAGGCCTCAGCCCCCATGGCAGTTCACCTTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CCA 72 bp ACGGGCCAGGTGAATTCAGCTGTGAGCAGGGCTGAGTaGCAGAGAGAGGGCCCTACAATAGGACAGGAAGCC +
Preference number: 3 (lower is better)
Translates to: TGQVNSAVSRAE*QREGPTIGQEA
Trigger: GGCTTCCTGTCCTATTGTAGGGCCCTCTCTCTGCCACTCAGCCCTGCTCACAGCTGAATTCACCTGGCCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR CAA 90 bp CACTGGGCTGTTCGGCACTGTAAGCCTCAGAGCTATAGGACTCCCTGCTGGACACCTGAGATGACACCTTaGAGCCTCATGGGCATCTCC +
Preference number: 3 (lower is better)
Translates to: HWAVRHCKPQSYRTPCWTPEMTP*SLMGIS
Trigger: GGAGATGCCCATGAGGCTCAAAGGTGTCATCTCAGG...TGTCCAGCAGGGAGTCCTATAGCTCTGAGGCTTACAGTGCCGAACAGCCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR TCA 72 bp TTACACGGGCCAGGTGAATTCAGCTGTGAGCAGGGCTaGGTGGCAGAGAGAGGGCCCTACAATAGGACAGGA +
Preference number: 3 (lower is better)
Translates to: LHGPGEFSCEQG*VAERGPYNRTG
Trigger: TCCTGTCCTATTGTAGGGCCCTCTCTCTGCCACTCAGCCCTGCTCACAGCTGAATTCACCTGGCCCGTGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR TCA 72 bp CTCCTGAGCCCTAGTCTCTGCCAACTCCAGTCTACCTaGGCCCAGGCCAGATCGGAACCTCTTCAAAAGAAC +
Preference number: 3 (lower is better)
Translates to: LLSPSLCQLQST*AQARSEPLQKN
Trigger: GTTCTTTTGAAGAGGTTCCGATCTGGCCTGGGCTCAGGTAGACTGGAGTTGGCAGAGACTAGGGCTCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR TCA 72 bp CCTGTGAAGCTCCATCAGATACTGAGTACAGAAAGGTaGACTGCCATGGGGGCTGAGGCCTCTGTGCACTGG +
Preference number: 3 (lower is better)
Translates to: PVKLHQILSTER*TAMGAEASVHW
Trigger: CCAGTGCACAGAGGCCTCAGCCCCCATGGCAGTTCACCTTTCTGTACTCAGTATCTGATGGAGCTTCACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR GCA 72 bp AAGGAGGACCGGGACAAAGGCTCTGGATGGAATTCCTaGAAAGACACAGTGCCCCTCCTTAAGACGCAGGTG +
Preference number: 3 (lower is better)
Translates to: KEDRDKGSGWNS*KDTVPLLKTQV
Trigger: CACCTGCGTCTTAAGGAGGGGCACTGTGTCTTTGCAGGAATTCCATCCAGAGCCTTTGTCCCGGTCCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR GCA 72 bp GGAGGACAGCTGCTGGCGTCAAGATGCTCTTGTGGATaGATTCAGAAGAGGCTAAGTTGTGGGCCAGGTCAC +
Preference number: 3 (lower is better)
Translates to: GGQLLASRCSCG*IQKRLSCGPGH
Trigger: GTGACCTGGCCCACAACTTAGCCTCTTCTGAATGCATCCACAAGAGCATCTTGACGCCAGCAGCTGTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CCA 72 bp CCCCAGAGACCACCTCACCCTGTCAGTCAGCACTCATaGGTTCCCCAGGAAGAGCATCTTTCCAAACAGGTT +
Preference number: 3 (lower is better)
Translates to: PQRPPHPVSQHS*VPQEEHLSKQV
Trigger: AACCTGTTTGGAAAGATGCTCTTCCTGGGGAACCCATGAGTGCTGACTGACAGGGTGAGGTGGTCTCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CCA 72 bp ATGCTCTTGTGGATGCATTCAGAAGAGGCTAAGTTGTaGGCCAGGTCACGGCTGGGCTTCCCACAGGCAATC +
Preference number: 3 (lower is better)
Translates to: MLLWMHSEEAKL*ARSRLGFPQAI
Trigger: GATTGCCTGTGGGAAGCCCAGCCGTGACCTGGCCCACAACTTAGCCTCTTCTGAATGCATCCACAAGAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CCA 72 bp CTCTGGAGGACAGCTGCTGGCGTCAAGATGCTCTTGTaGATGCATTCAGAAGAGGCTAAGTTGTGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: LWRTAAGVKMLL*MHSEEAKLWAR
Trigger: CCTGGCCCACAACTTAGCCTCTTCTGAATGCATCCACAAGAGCATCTTGACGCCAGCAGCTGTCCTCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CCA 72 bp GGACAGGAAGCCCACAAGCCTCTGGAGGACAGCTGCTaGCGTCAAGATGCTCTTGTGGATGCATTCAGAAGA +
Preference number: 3 (lower is better)
Translates to: GQEAHKPLEDSC*RQDALVDAFRR
Trigger: TCTTCTGAATGCATCCACAAGAGCATCTTGACGCCAGCAGCTGTCCTCCAGAGGCTTGTGGGCTTCCTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR TCA 72 bp AGGCAGACATCCTACCACTGCACTACATCCCTAGCCTaGGATGACACCTTTGAGCCTCATGGGCATCTCCCT +
Preference number: 3 (lower is better)
Translates to: RQTSYHCTTSLA*DDTFEPHGHLP
Trigger: AGGGAGATGCCCATGAGGCTCAAAGGTGTCATCTCAGGCTAGGGATGTAGTGCAGTGGTAGGATGTCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CCA 72 bp CCAGCCACGATTGCCCAAGGTTTTCTAGGTCATCTTTaGGGAGGCTGGGTACTTAGGTGGTCAGATGGTCCT +
Preference number: 3 (lower is better)
Translates to: PATIAQGFLGHL*GGWVLRWSDGP
Trigger: AGGACCATCTGACCACCTAAGTACCCAGCCTCCCCAAAGATGACCTAGAAAACCTTGGGCAATCGTGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR CAA 90 bp CACTGGGCTGTTCGGCACTGTAAGCCTCAGAGCTATAGGACTCCCTGCTGGACATGGCTCTCTGCAGATTaGAAAGCAGGTCTGTCAAAG +
Preference number: 3 (lower is better)
Translates to: HWAVRHCKPQSYRTPCWTWLSAD*KAGLSK
Trigger: CTTTGACAGACCTGCTTTCAAATCTGCAGAGAGCCA...TGTCCAGCAGGGAGTCCTATAGCTCTGAGGCTTACAGTGCCGAACAGCCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR GCA 72 bp GAAGAAGGGAACTACAGTTTCAACCTCATTAGTTCATaGAGCTCAGTGCCTGCCCACAGGGAGCGCGGTACA +
Preference number: 3 (lower is better)
Translates to: EEGNYSFNLISS*SSVPAHRERGT
Trigger: TGTACCGCGCTCCCTGTGGGCAGGCACTGAGCTGCATGAACTAATGAGGTTGAAACTGTAGTTCCCTTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR GCA 72 bp CCACAAGCCTCTGGAGGACAGCTGCTGGCGTCAAGATaGTCTTGTGGATGCATTCAGAAGAGGCTAAGTTGT +
Preference number: 3 (lower is better)
Translates to: PQASGGQLLASR*SCGCIQKRLSC
Trigger: ACAACTTAGCCTCTTCTGAATGCATCCACAAGAGCATCTTGACGCCAGCAGCTGTCCTCCAGAGGCTTGTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CCA 72 bp CTACCCAGCCTTGAGTGTACCTCCAAGGCCCAGATCTaGCTCTCTGCAGATTTGAAAGCAGGTCTGTCAAAG +
Preference number: 3 (lower is better)
Translates to: LPSLECTSKAQI*LSADLKAGLSK
Trigger: CTTTGACAGACCTGCTTTCAAATCTGCAGAGAGCCAGATCTGGGCCTTGGAGGTACACTCAAGGCTGGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR CAA 90 bp ACAAGGAGGACCGGGACAAAGGCTCTGGATGGAATTCCTGCAAAGACACAGTGCAGAGTTCCCAGATGGTaGCAAAGGCTAGGGCATGTT +
Preference number: 3 (lower is better)
Translates to: TRRTGTKALDGIPAKTQCRVPRW*QRLGHV
Trigger: AACATGCCCTAGCCTTTGCAACCATCTGGGAACTCT...GCACTGTGTCTTTGCAGGAATTCCATCCAGAGCCTTTGTCCCGGTCCTCCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR TCA 72 bp GTACCTCCAAGGCCCAGATCTGGCTCTCTGCAGATTTaGAAGCAGGTCTGTCAAAGCTGGATGGTAGTTCCT +
Preference number: 3 (lower is better)
Translates to: VPPRPRSGSLQI*KQVCQSWMVVP
Trigger: AGGAACTACCATCCAGCTTTGACAGACCTGCTTTCAAATCTGCAGAGAGCCAGATCTGGGCCTTGGAGGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CCA 72 bp CATAAAGACAAGGAGGACCGGGACAAAGGCTCTGGATaGAATTCCTGCAAAGACACAGTGCCCCTCCTTAAG +
Preference number: 3 (lower is better)
Translates to: HKDKEDRDKGSG*NSCKDTVPLLK
Trigger: CTTAAGGAGGGGCACTGTGTCTTTGCAGGAATTCCATCCAGAGCCTTTGTCCCGGTCCTCCTTGTCTTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR-3UTR CAA 90 bp CACTGGGCTGTTCGGCACTGTAAGCCTCAGAGCTATAGGACTCCCTGCTGGACAAAACACATTAGACTTTaGAAAACCCAGCCAAGTAGC +
Preference number: 3 (lower is better)
Translates to: HWAVRHCKPQSYRTPCWTKHIRL*KTQPSS
Trigger: GCTACTTGGCTGGGTTTTCAAAAGTCTAATGTGTTT...TGTCCAGCAGGGAGTCCTATAGCTCTGAGGCTTACAGTGCCGAACAGCCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR TCA 72 bp GGGCAGAGCAGCAGATACAAAATGTGGACATTCCTTTaGGCCTTTTCTCCTTCAACCTGGGCTATCCAGCCA +
Preference number: 3 (lower is better)
Translates to: GQSSRYKMWTFL*AFSPSTWAIQP
Trigger: TGGCTGGATAGCCCAGGTTGAAGGAGAAAAGGCTCAAAGGAATGTCCACATTTTGTATCTGCTGCTCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR GCA 72 bp CCTGACAGGAACCCTGTCACTCAGCCAGGCCGTACTTaGTTGTTTATAAGGCAGCAGCAATATGAGGTCATA +
Preference number: 3 (lower is better)
Translates to: PDRNPVTQPGRT*LFIRQQQYEVI
Trigger: TATGACCTCATATTGCTGCTGCCTTATAAACAAGCAAGTACGGCCTGGCTGAGTGACAGGGTTCCTGTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR TCA 72 bp AAACAAAACCAAGAACCAAATGCTTCCCCACTGAGATaGGACCAGGTAGCACCAGGGAAGCAGATGAAACAG +
Preference number: 3 (lower is better)
Translates to: KQNQEPNASPLR*DQVAPGKQMKQ
Trigger: CTGTTTCATCTGCTTCCCTGGTGCTACCTGGTCTCATCTCAGTGGGGAAGCATTTGGTTCTTGGTTTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CCA 72 bp AGAAGACCTATCCAGAATGGAGTACTTAAAGGGGGCTaGGGAGTGGGAGGGACTAAAAATCCAAGTAGAACA +
Preference number: 3 (lower is better)
Translates to: RRPIQNGVLKGG*GVGGTKNPSRT
Trigger: TGTTCTACTTGGATTTTTAGTCCCTCCCACTCCCCAGCCCCCTTTAAGTACTCCATTCTGGATAGGTCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CCA 72 bp GGAACTATATTCTTGGGCCTAGGTGGAAATCACTTTTaGATACGTCACTCAAGGCTTTGCCCATTGCCAAGC +
Preference number: 3 (lower is better)
Translates to: GTIFLGLGGNHF*IRHSRLCPLPS
Trigger: GCTTGGCAATGGGCAAAGCCTTGAGTGACGTATCCAAAAGTGATTTCCACCTAGGCCCAAGAATATAGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CCA 72 bp GTCGTGGCTCCAAGGAACTATATTCTTGGGCCTAGGTaGAAATCACTTTTGGATACGTCACTCAAGGCTTTG +
Preference number: 3 (lower is better)
Translates to: VVAPRNYILGPR*KSLLDTSLKAL
Trigger: CAAAGCCTTGAGTGACGTATCCAAAAGTGATTTCCACCTAGGCCCAAGAATATAGTTCCTTGGAGCCACGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR GCA 72 bp GTTTATGAATCCAAGGTAGAACCTAGCAGAAAAGGCTaGCTGTACTTCCCAAGCCAAAGGATCACCACACTT +
Preference number: 3 (lower is better)
Translates to: VYESKVEPSRKG*LYFPSQRITTL
Trigger: AAGTGTGGTGATCCTTTGGCTTGGGAAGTACAGGCAGCCTTTTCTGCTAGGTTCTACCTTGGATTCATAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR GCA 72 bp GGAGCCTGCTACCTGAGCTCCAGTTCTGTTGCTCTATaGTTTCCCTCAGCTTTTGATATTTATGCAGATTTT +
Preference number: 3 (lower is better)
Translates to: GACYLSSSSVAL*FPSAFDIYADF
Trigger: AAAATCTGCATAAATATCAAAAGCTGAGGGAAAGCATAGAGCAACAGAACTGGAGCTCAGGTAGCAGGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR TCA 72 bp TGCTTTCCCTCAGCTTTTGATATTTATGCAGATTTTTaGCTGGGATGTAGTCGTGGCTCCAAGGAACTATAT +
Preference number: 3 (lower is better)
Translates to: CFPSAFDIYADF*LGCSRGSKELY
Trigger: ATATAGTTCCTTGGAGCCACGACTACATCCCAGTCAAAAATCTGCATAAATATCAAAAGCTGAGGGAAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR GCA 90 bp TGCTATACTCTCTGCTGCATCCAAAACCTCACCAGGCACCGGGCTCACCAGGGAGCCAGCCGCGCAGAGTaGCGCCTGGCACGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: CYTLCCIQNLTRHRAHQGASRAE*RLARRS
Trigger: ACTTCGGCGTGCCAGGCGGCACTCTGCGCGGCTGGC...TCCCTGGTGAGCCCGGTGCCTGGTGAGGTTTTGGATGCAGCAGAGAGTATAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR TCA 90 bp CACTGGGCTGTTCGGCACTGTAAGCCTCAGAGCTATAGGACTCCCTGCTGGACAGCCGCTCACCGCCCTTaGCGCGCTCGATGGCTTGCA +
Preference number: 4 (lower is better)
Translates to: HWAVRHCKPQSYRTPCWTAAHRP*RARWLA
Trigger: TGCAAGCCATCGAGCGCGTCAAGGGCGGTGAGCGGC...TGTCCAGCAGGGAGTCCTATAGCTCTGAGGCTTACAGTGCCGAACAGCCCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR CCA 90 bp GCTCTGGATGGAATTCCTGCAAAGACACAGTGCCCCTCCTTAAGACGCAGGTGCGCGCAGAGTGCCGCCTaGCACGCCGAAGTCGCGGCA +
Preference number: 4 (lower is better)
Translates to: ALDGIPAKTQCPSLRRRCAQSAA*HAEVAA
Trigger: TGCCGCGACTTCGGCGTGCCAGGCGGCACTCTGCGC...GCACCTGCGTCTTAAGGAGGGGCACTGTGTCTTTGCAGGAATTCCATCCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR TCA 90 bp GCTGTTCGGCACTGTAAGCCTCAGAGCTATAGGACTCCCTGCTGGACAACCTGGGTCTCCTCTACCTGGTaGGCTGGCTGCTGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: AVRHCKPQSYRTPCWTTWVSSTW*AGCCPG
Trigger: GCCTGGGCAGCAGCCAGCTCACCAGGTAGAGGAGAC...CCAGGTTGTCCAGCAGGGAGTCCTATAGCTCTGAGGCTTACAGTGCCGAACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR GCA 90 bp CATTCAGAAGAGGCTAAGTTGTGGGCCAGGTCACGGCTGGGCTTCCCACAGGCACCCAGGCTCAAAGGCTaGTCGCAGACCCAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: HSEEAKLWARSRLGFPQAPRLKG*SQTQQP
Trigger: TGGCTGCTGGGTCTGCGAGCAGCCTTTGAGCCTGGG...TGCCTGTGGGAAGCCCAGCCGTGACCTGGCCCACAACTTAGCCTCTTCTGAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR TCA 90 bp TTCCCCACTGAGATGAGACCAGGTAGCACCAGGGAAGCAGATGAAACAGCAGCAGCTTGGGCTCGTCCTTaGGCCAGCCGCGCAGAGTGC +
Preference number: 4 (lower is better)
Translates to: FPTEMRPGSTREADETAAAWARP*ASRAEC
Trigger: GCACTCTGCGCGGCTGGCTCAAGGACGAGCCCAAGC...TGCTGCTGTTTCATCTGCTTCCCTGGTGCTACCTGGTCTCATCTCAGTGGGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR TCA 90 bp TGCTATACTCTCTGCTGCATCCAAAACCTCACCAGGCACCGGGCTCACCAGGGATTGTCCTGGTTGTGGTaGCGCAGGCTGGGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: CYTLCCIQNLTRHRAHQGLSWLW*RRLGGS
Trigger: GGACCCACCCAGCCTGCGTCACCACAACCAGGACAA...TCCCTGGTGAGCCCGGTGCCTGGTGAGGTTTTGGATGCAGCAGAGAGTATAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR GCA 90 bp CATTCAGAAGAGGCTAAGTTGTGGGCCAGGTCACGGCTGGGCTTCCCACAGGCAAGCACAGCCTTCTGTTaGAGGCAGCTTCGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: HSEEAKLWARSRLGFPQASTAFC*RQLRRR
Trigger: CCTGCGCCGAAGCTGCCTGCAACAGAAGGCTGTGCT...TGCCTGTGGGAAGCCCAGCCGTGACCTGGCCCACAACTTAGCCTCTTCTGAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR GCA 90 bp GGGGCAAGTGAACTGGGATTCCTGAGTGAGGCCTGGTACACAGCAGGTGGCAATGGGCCACCTCTTCTCTaGAGCCTTCCGGAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: GASELGFLSEAWYTAGGNGPPLL*SLPEGL
Trigger: GAGGCCTTCCGGAAGGCTGCAGAGAAGAGGTGGCCC...ATTGCCACCTGCTGTGTACCAGGCCTCACTCAGGAATCCCAGTTCACTTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR CCA 90 bp CCTAGCAGAAAAGGCTGCCTGTACTTCCCAAGCCAAAGGATCACCACACTTTGGAGTCGCGGCACACGCTaGCCTGCCGCTCACCGCCCT +
Preference number: 4 (lower is better)
Translates to: PSRKGCLYFPSQRITTLWSRGTR*PAAHRP
Trigger: AGGGCGGTGAGCGGCAGGCCAGCGTGTGCCGCGACT...CCAAAGTGTGGTGATCCTTTGGCTTGGGAAGTACAGGCAGCCTTTTCTGCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR GCA 90 bp TGCTATACTCTCTGCTGCATCCAAAACCTCACCAGGCACCGGGCTCACCAGGGACGCATCTTCTTGCGCTaGGTGCCCACTTCTCCACCC +
Preference number: 4 (lower is better)
Translates to: CYTLCCIQNLTRHRAHQGRIFLR*VPTSPP
Trigger: GGGTGGAGAAGTGGGCACGCAGCGCAAGAAGATGCG...TCCCTGGTGAGCCCGGTGCCTGGTGAGGTTTTGGATGCAGCAGAGAGTATAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR GCA 90 bp GCTCTGGATGGAATTCCTGCAAAGACACAGTGCCCCTCCTTAAGACGCAGGTGCATGCCATGGCGCTTCTaGCAGCGCCAGAACCAGCCG +
Preference number: 4 (lower is better)
Translates to: ALDGIPAKTQCPSLRRRCMPWRF*QRQNQP
Trigger: CGGCTGGTTCTGGCGCTGGCAGAAGCGCCATGGCAT...GCACCTGCGTCTTAAGGAGGGGCACTGTGTCTTTGCAGGAATTCCATCCAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR CCA 90 bp CCTAGCAGAAAAGGCTGCCTGTACTTCCCAAGCCAAAGGATCACCACACTTTGGCAGGCTAGCTGGGGATaGAGGAGCAGCGGGGGCCAC +
Preference number: 4 (lower is better)
Translates to: PSRKGCLYFPSQRITTLWQASWG*RSSGGH
Trigger: GTGGCCCCCGCTGCTCCTCCATCCCCAGCTAGCCTG...CCAAAGTGTGGTGATCCTTTGGCTTGGGAAGTACAGGCAGCCTTTTCTGCTAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR GCA 90 bp ACAAGGAGGACCGGGACAAAGGCTCTGGATGGAATTCCTGCAAAGACACAGTGCGCCGTGCTCCAACGGTaGAGGGATGTGTGCTCGGCT +
Preference number: 4 (lower is better)
Translates to: TRRTGTKALDGIPAKTQCAVLQR*RDVCSA
Trigger: AGCCGAGCACACATCCCTGCACCGTTGGAGCACGGC...GCACTGTGTCTTTGCAGGAATTCCATCCAGAGCCTTTGTCCCGGTCCTCCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR GCA 90 bp GCTCTGGATGGAATTCCTGCAAAGACACAGTGCCCCTCCTTAAGACGCAGGTGCGCCAGCAGCGCTCTATaGTGCCTGCCTGGACCAAGT +
Preference number: 4 (lower is better)
Translates to: ALDGIPAKTQCPSLRRRCASSAL*CLPGPS
Trigger: ACTTGGTCCAGGCAGGCAGCATAGAGCGCTGCTGGC...GCACCTGCGTCTTAAGGAGGGGCACTGTGTCTTTGCAGGAATTCCATCCAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR CCA 90 bp TTCCCCACTGAGATGAGACCAGGTAGCACCAGGGAAGCAGATGAAACAGCAGCAGGCTGCCCGTCAGGTTaGCGGCCAGCAGTACTGTCA +
Preference number: 4 (lower is better)
Translates to: FPTEMRPGSTREADETAAGCPSG*RPAVLS
Trigger: TGACAGTACTGCTGGCCGCCAACCTGACGGGCAGCC...TGCTGCTGTTTCATCTGCTTCCCTGGTGCTACCTGGTCTCATCTCAGTGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR CCA 90 bp CTTTTCTCCTTCAACCTGGGCTATCCAGCCATAGTTCCTGGAGAAGGCTGGTGCGCGGCCCCACTTCTCTaGGATCCTGGCTCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: LFSFNLGYPAIVPGEGWCAAPLL*DPGSLA
Trigger: GGCTAGAGAGCCAGGATCCCAGAGAAGTGGGGCCGC...GCACCAGCCTTCTCCAGGAACTATGGCTGGATAGCCCAGGTTGAAGGAGAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR TCA 90 bp TGCTATACTCTCTGCTGCATCCAAAACCTCACCAGGCACCGGGCTCACCAGGGACCGGTAGCTGCCCGATaGCTAGTGGTTTCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: CYTLCCIQNLTRHRAHQGPVAAR*LVVSAC
Trigger: ACAAGCTGAAACCACTAGTCATCGGGCAGCTACCGG...TCCCTGGTGAGCCCGGTGCCTGGTGAGGTTTTGGATGCAGCAGAGAGTATAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR GCA 90 bp CTTTTCTCCTTCAACCTGGGCTATCCAGCCATAGTTCCTGGAGAAGGCTGGTGCGGCCACCTCTTCAGGTaGCAGGCGCTTGTAAGCCAG +
Preference number: 4 (lower is better)
Translates to: LFSFNLGYPAIVPGEGWCGHLFR*QALVSQ
Trigger: CTGGCTTACAAGCGCCTGGCACCTGAAGAGGTGGCC...GCACCAGCCTTCTCCAGGAACTATGGCTGGATAGCCCAGGTTGAAGGAGAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR CCA 90 bp AGCCTTGAGTGTACCTCCAAGGCCCAGATCTGGCTCTCTGCAGATTTGAAAGCACCAACTCGGACAGGGTaGATGGGCCACCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SLECTSKAQIWLSADLKAPTRTG*MGHQQH
Trigger: GTGCTGCTGGTGGCCCATCCACCCTGTCCGAGTTGG...TGCTTTCAAATCTGCAGAGAGCCAGATCTGGGCCTTGGAGGTACACTCAAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR CCA 90 bp CATTCAGAAGAGGCTAAGTTGTGGGCCAGGTCACGGCTGGGCTTCCCACAGGCAACTTCTCTGGGATCCTaGCTCTCTAGCCACCTCAGA +
Preference number: 4 (lower is better)
Translates to: HSEEAKLWARSRLGFPQATSLGS*LSSHLR
Trigger: TCTGAGGTGGCTAGAGAGCCAGGATCCCAGAGAAGT...TGCCTGTGGGAAGCCCAGCCGTGACCTGGCCCACAACTTAGCCTCTTCTGAATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR GCA 90 bp GCTGTTCGGCACTGTAAGCCTCAGAGCTATAGGACTCCCTGCTGGACAACCTGGTGTGTGCTCGGCTGGTaGCCTTGGATAAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: AVRHCKPQSYRTPCWTTWCVLGW*PWIRRA
Trigger: TGCTCTTCTTATCCAAGGGCACCAGCCGAGCACACA...CCAGGTTGTCCAGCAGGGAGTCCTATAGCTCTGAGGCTTACAGTGCCGAACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR GCA 90 bp GCTCTGGATGGAATTCCTGCAAAGACACAGTGCCCCTCCTTAAGACGCAGGTGCCAAATGCTTGAAGGCTaGCACCACGCCGTGCTCCAA +
Preference number: 4 (lower is better)
Translates to: ALDGIPAKTQCPSLRRRCQMLEG*HHAVLQ
Trigger: TTGGAGCACGGCGTGGTGGCAGCCTTCAAGCATTTG...GCACCTGCGTCTTAAGGAGGGGCACTGTGTCTTTGCAGGAATTCCATCCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR CCA 90 bp GCTCTGGATGGAATTCCTGCAAAGACACAGTGCCCCTCCTTAAGACGCAGGTGCCGATCTCCTCCTCGTTaGCCAGACGCATCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: ALDGIPAKTQCPSLRRRCRSPPR*PDASSC
Trigger: GCAAGAAGATGCGTCTGGCCAACGAGGAGGAGATCG...GCACCTGCGTCTTAAGGAGGGGCACTGTGTCTTTGCAGGAATTCCATCCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR CCA 90 bp CTACCTGAGCCCAGGCCAGATCGGAACCTCTTCAAAAGAACAGTACATGTAACCACCCACCAGGCTCTTTaGAGTCCCCAGTGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: LPEPRPDRNLFKRTVHVTTHQAL*SPQCPE
Trigger: CTCCGGGCACTGGGGACTCCAAAGAGCCTGGTGGGT...GGTTACATGTACTGTTCTTTTGAAGAGGTTCCGATCTGGCCTGGGCTCAGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR CCA 90 bp GGGGCAAGTGAACTGGGATTCCTGAGTGAGGCCTGGTACACAGCAGGTGGCAATTGTTTGAAGTTCCTCTaGGGACCCAAGGAGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GASELGFLSEAWYTAGGNCLKFL*GPKELR
Trigger: CCTGAGCTCCTTGGGTCCCCAGAGGAACTTCAAACA...ATTGCCACCTGCTGTGTACCAGGCCTCACTCAGGAATCCCAGTTCACTTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CAA 72 bp AAGATGCTCTTGTGGATGCATTCAGAAGAGGCTAAGTaGTGGGCCAGGTCACGGCTGGGCTTCCCACAGGCA +
Preference number: 4 (lower is better)
Translates to: KMLLWMHSEEAK*WARSRLGFPQA
Trigger: TGCCTGTGGGAAGCCCAGCCGTGACCTGGCCCACAACTTAGCCTCTTCTGAATGCATCCACAAGAGCATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CAA 72 bp AGCCTCTGGAGGACAGCTGCTGGCGTCAAGATGCTCTaGTGGATGCATTCAGAAGAGGCTAAGTTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: SLWRTAAGVKML*WMHSEEAKLWA
Trigger: GGCCCACAACTTAGCCTCTTCTGAATGCATCCACAAGAGCATCTTGACGCCAGCAGCTGTCCTCCAGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR GCA 90 bp CTAAACAAAGTGCTTTGTGGTTTGTCCTGCCCATTGATCCAAACACTTGCTAACCGGCACACGCTGGCCTaGCGCTCACCGCCCTTGACG +
Preference number: 4 (lower is better)
Translates to: LNKVLCGLSCPLIQTLANRHTLA*RSPPLT
Trigger: CGTCAAGGGCGGTGAGCGGCAGGCCAGCGTGTGCCG...GTTAGCAAGTGTTTGGATCAATGGGCAGGACAAACCACAAAGCACTTTGTTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR GCA 90 bp GCTGTTCGGCACTGTAAGCCTCAGAGCTATAGGACTCCCTGCTGGACAACCTGGCTTGTAAGCCAGAGCTaGCAGATGTGTGAGGTCACT +
Preference number: 4 (lower is better)
Translates to: AVRHCKPQSYRTPCWTTWLVSQS*QMCEVT
Trigger: AGTGACCTCACACATCTGGCAGCTCTGGCTTACAAG...CCAGGTTGTCCAGCAGGGAGTCCTATAGCTCTGAGGCTTACAGTGCCGAACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR TCA 90 bp GCTCTGGATGGAATTCCTGCAAAGACACAGTGCCCCTCCTTAAGACGCAGGTGCCTTGCAGCTTGTCTTTaGTTGAGTAGGCCTTGCGGA +
Preference number: 4 (lower is better)
Translates to: ALDGIPAKTQCPSLRRRCLAACL*LSRPCG
Trigger: TCCGCAAGGCCTACTCAATCAAAGACAAGCTGCAAG...GCACCTGCGTCTTAAGGAGGGGCACTGTGTCTTTGCAGGAATTCCATCCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR TCA 90 bp CCTAGCAGAAAAGGCTGCCTGTACTTCCCAAGCCAAAGGATCACCACACTTTGGGAACGAAGCTTCTCATaGAGTCCAGAGGGGAGCCAC +
Preference number: 4 (lower is better)
Translates to: PSRKGCLYFPSQRITTLWERSFS*SPEGSH
Trigger: GTGGCTCCCCTCTGGACTTCATGAGAAGCTTCGTTC...CCAAAGTGTGGTGATCCTTTGGCTTGGGAAGTACAGGCAGCCTTTTCTGCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR TCA 90 bp GTGGCAATGGCTGCTGAAGAAGGGAACTACAGTTTCAACCTCATTAGTTCATGCGGCGCAGGTAGCGCTTaGCGCCAGGGACAAATTCCT +
Preference number: 4 (lower is better)
Translates to: VAMAAEEGNYSFNLISSCGAGSA*RQGQIP
Trigger: AGGAATTTGTCCCTGGCGTCAAGCGCTACCTGCGCC...GCATGAACTAATGAGGTTGAAACTGTAGTTCCCTTCTTCAGCAGCCATTGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR TCA 90 bp AAGGCCCAGATCTGGCTCTCTGCAGATTTGAAAGCAGGTCTGTCAAAGCTGGATGCACCATCAGGTGTTTaGAGTTCCTCTGGGGACCCA +
Preference number: 4 (lower is better)
Translates to: KAQIWLSADLKAGLSKLDAPSGV*SSSGDP
Trigger: TGGGTCCCCAGAGGAACTTCAAACACCTGATGGTGC...ATCCAGCTTTGACAGACCTGCTTTCAAATCTGCAGAGAGCCAGATCTGGGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR GCA 90 bp GCTGGCGTCAAGATGCTCTTGTGGATGCATTCAGAAGAGGCTAAGTTGTGGGCCACGCGCTCGATGGCTTaGAGCTTGTCTTTGATTGAG +
Preference number: 4 (lower is better)
Translates to: AGVKMLLWMHSEEAKLWATRSMA*SLSLIE
Trigger: CTCAATCAAAGACAAGCTGCAAGCCATCGAGCGCGT...GGCCCACAACTTAGCCTCTTCTGAATGCATCCACAAGAGCATCTTGACGCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR CCA 90 bp GGAGTGGGAGGGACTAAAAATCCAAGTAGAACAGAATTTGCTATACTCTCTGCTAGAGGGCAGGCTAGCTaGGGATGGAGGAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: GVGGTKNPSRTEFAILSARGQAS*GWRSSG
Trigger: CCCGCTGCTCCTCCATCCCCAGCTAGCCTGCCCTCT...AGCAGAGAGTATAGCAAATTCTGTTCTACTTGGATTTTTAGTCCCTCCCACTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR GCA 90 bp TTTTCTCTTCTTTTTACAGTGCAGTTGTTTGAACCTAGGGCCTTTGGCATCCTAGCTGCCACCACGCCGTaGTCCAACGGTGCAGGGATG +
Preference number: 4 (lower is better)
Translates to: FSLLFTVQLFEPRAFGILAATTP*SNGAGM
Trigger: CATCCCTGCACCGTTGGAGCACGGCGTGGTGGCAGC...TAGGATGCCAAAGGCCCTAGGTTCAAACAACTGCACTGTAAAAAGAAGAGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR CCA 90 bp GTGGCAATGGCTGCTGAAGAAGGGAACTACAGTTTCAACCTCATTAGTTCATGCCGCCAGAACCAGCCGTaGCTAGCCTTGAAGGTACAC +
Preference number: 4 (lower is better)
Translates to: VAMAAEEGNYSFNLISSCRQNQP*LALKVH
Trigger: GTGTACCTTCAAGGCTAGCCACGGCTGGTTCTGGCG...GCATGAACTAATGAGGTTGAAACTGTAGTTCCCTTCTTCAGCAGCCATTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR CCA 90 bp GGAGTGGGAGGGACTAAAAATCCAAGTAGAACAGAATTTGCTATACTCTCTGCTCCAAGGAGCTCAGGCTaGCACTGCCTGGGAGTCTCC +
Preference number: 4 (lower is better)
Translates to: GVGGTKNPSRTEFAILSAPRSSG*HCLGVS
Trigger: GGAGACTCCCAGGCAGTGCCAGCCTGAGCTCCTTGG...AGCAGAGAGTATAGCAAATTCTGTTCTACTTGGATTTTTAGTCCCTCCCACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CAA 72 bp TGTACCTCCAAGGCCCAGATCTGGCTCTCTGCAGATTaGAAAGCAGGTCTGTCAAAGCTGGATGGTAGTTCC +
Preference number: 4 (lower is better)
Translates to: CTSKAQIWLSAD*KAGLSKLDGSS
Trigger: GGAACTACCATCCAGCTTTGACAGACCTGCTTTCAAATCTGCAGAGAGCCAGATCTGGGCCTTGGAGGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR GCA 90 bp CTAAACAAAGTGCTTTGTGGTTTGTCCTGCCCATTGATCCAAACACTTGCTAACGCAAAGGCCTCAGCCTaGGCTTGGATAACTGGCCCG +
Preference number: 4 (lower is better)
Translates to: LNKVLCGLSCPLIQTLANAKASA*AWITGP
Trigger: CGGGCCAGTTATCCAAGCGCAGGCTGAGGCCTTTGC...GTTAGCAAGTGTTTGGATCAATGGGCAGGACAAACCACAAAGCACTTTGTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR GCA 90 bp CCTAGCAGAAAAGGCTGCCTGTACTTCCCAAGCCAAAGGATCACCACACTTTGGGAAGAGCACTCGAACTaGACCATCAGGTGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: PSRKGCLYFPSQRITTLWEEHSN*TIRCLK
Trigger: CTTCAAACACCTGATGGTGCAGTTCGAGTGCTCTTC...CCAAAGTGTGGTGATCCTTTGGCTTGGGAAGTACAGGCAGCCTTTTCTGCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CAA 72 bp TGGGCAGAGCAGCAGATACAAAATGTGGACATTCCTTaGAGCCTTTTCTCCTTCAACCTGGGCTATCCAGCC +
Preference number: 4 (lower is better)
Translates to: WAEQQIQNVDIP*SLFSFNLGYPA
Trigger: GGCTGGATAGCCCAGGTTGAAGGAGAAAAGGCTCAAAGGAATGTCCACATTTTGTATCTGCTGCTCTGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CAA 72 bp GACAGGAACCCTGTCACTCAGCCAGGCCGTACTTGCTaGTTTATAAGGCAGCAGCAATATGAGGTCATAACC +
Preference number: 4 (lower is better)
Translates to: DRNPVTQPGRTC*FIRQQQYEVIT
Trigger: GGTTATGACCTCATATTGCTGCTGCCTTATAAACAAGCAAGTACGGCCTGGCTGAGTGACAGGGTTCCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR TCA 90 bp GTGGCAATGGCTGCTGAAGAAGGGAACTACAGTTTCAACCTCATTAGTTCATGCGTTTGTACAAATGCTTaGAGGCTGCCACCACGCCGT +
Preference number: 4 (lower is better)
Translates to: VAMAAEEGNYSFNLISSCVCTNA*RLPPRR
Trigger: ACGGCGTGGTGGCAGCCTTCAAGCATTTGTACAAAC...GCATGAACTAATGAGGTTGAAACTGTAGTTCCCTTCTTCAGCAGCCATTGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR GCA 90 bp CTAAACAAAGTGCTTTGTGGTTTGTCCTGCCCATTGATCCAAACACTTGCTAACCCAGACGCATCTTCTTaGGCTGCGTGCCCACTTCTC +
Preference number: 4 (lower is better)
Translates to: LNKVLCGLSCPLIQTLANPDASS*AACPLL
Trigger: GAGAAGTGGGCACGCAGCGCAAGAAGATGCGTCTGG...GTTAGCAAGTGTTTGGATCAATGGGCAGGACAAACCACAAAGCACTTTGTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR GCA 90 bp TTTTCTCTTCTTTTTACAGTGCAGTTGTTTGAACCTAGGGCCTTTGGCATCCTAGTTTCAGCTTGTGGCTaGCCGTCAGGTTGGCGGCCA +
Preference number: 4 (lower is better)
Translates to: FSLLFTVQLFEPRAFGILVSACG*PSGWRP
Trigger: TGGCCGCCAACCTGACGGGCAGCCACAAGCTGAAAC...TAGGATGCCAAAGGCCCTAGGTTCAAACAACTGCACTGTAAAAAGAAGAGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR CCA 90 bp GTGGCAATGGCTGCTGAAGAAGGGAACTACAGTTTCAACCTCATTAGTTCATGCCTCGGCTGGTGCCCTTaGATAAGAAGAGCACTCGAA +
Preference number: 4 (lower is better)
Translates to: VAMAAEEGNYSFNLISSCLGWCP*IRRALE
Trigger: TTCGAGTGCTCTTCTTATCCAAGGGCACCAGCCGAG...GCATGAACTAATGAGGTTGAAACTGTAGTTCCCTTCTTCAGCAGCCATTGCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CAA 72 bp CAGACTGCCCTGGAGCTAAACAAAGTGCTTTGTGGTTaGTCCTGCCCATTGATCCAAACACTTGCTAACCTC +
Preference number: 4 (lower is better)
Translates to: QTALELNKVLCG*SCPLIQTLANL
Trigger: GAGGTTAGCAAGTGTTTGGATCAATGGGCAGGACAAACCACAAAGCACTTTGTTTAGCTCCAGGGCAGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CAA 72 bp GGTAGATCAGACTGCCCTGGAGCTAAACAAAGTGCTTaGTGGTTTGTCCTGCCCATTGATCCAAACACTTGC +
Preference number: 4 (lower is better)
Translates to: GRSDCPGAKQSA*WFVLPIDPNTC
Trigger: GCAAGTGTTTGGATCAATGGGCAGGACAAACCACAAAGCACTTTGTTTAGCTCCAGGGCAGTCTGATCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR GCA 90 bp TTTTCTCTTCTTTTTACAGTGCAGTTGTTTGAACCTAGGGCCTTTGGCATCCTATCTTCTTGCGCTGCGTaGCCACTTCTCCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: FSLLFTVQLFEPRAFGILSSCAA*PLLHPA
Trigger: AGCTGGGTGGAGAAGTGGGCACGCAGCGCAAGAAGA...TAGGATGCCAAAGGCCCTAGGTTCAAACAACTGCACTGTAAAAAGAAGAGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CAA 72 bp AGGTGGAAATCACTTTTGGATACGTCACTCAAGGCTTaGCCCATTGCCAAGCTGTTACATCCCTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: RWKSLLDTSLKA*PIAKLLHPFST
Trigger: AGTGGAGAAGGGATGTAACAGCTTGGCAATGGGCAAAGCCTTGAGTGACGTATCCAAAAGTGATTTCCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR TCA 90 bp CTAAACAAAGTGCTTTGTGGTTTGTCCTGCCCATTGATCCAAACACTTGCTAACCAGCTTGTCTTTGATTaGGTAGGCCTTGCGGAAAGT +
Preference number: 4 (lower is better)
Translates to: LNKVLCGLSCPLIQTLANQLVFD*VGLAES
Trigger: ACTTTCCGCAAGGCCTACTCAATCAAAGACAAGCTG...GTTAGCAAGTGTTTGGATCAATGGGCAGGACAAACCACAAAGCACTTTGTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CAA 72 bp GAGTGGGAGGGACTAAAAATCCAAGTAGAACAGAATTaGCTATACTCTCTGCTGCATCCAAAACCTCACCAG +
Preference number: 4 (lower is better)
Translates to: EWEGLKIQVEQN*LYSLLHPKPHQ
Trigger: CTGGTGAGGTTTTGGATGCAGCAGAGAGTATAGCAAATTCTGTTCTACTTGGATTTTTAGTCCCTCCCACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CAA 72 bp GAGCTAAACAAAGTGCTTTGTGGTTTGTCCTGCCCATaGATCCAAACACTTGCTAACCTCATGAATAGAAGA +
Preference number: 4 (lower is better)
Translates to: ELNKVLCGLSCP*IQTLANLMNRR
Trigger: TCTTCTATTCATGAGGTTAGCAAGTGTTTGGATCAATGGGCAGGACAAACCACAAAGCACTTTGTTTAGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
3UTR CAA 72 bp GCTCCAGTTCTGTTGCTCTATGCTTTCCCTCAGCTTTaGATATTTATGCAGATTTTTGACTGGGATGTAGTC +
Preference number: 4 (lower is better)
Translates to: APVLLLYAFPQL*IFMQIFDWDVV
Trigger: GACTACATCCCAGTCAAAAATCTGCATAAATATCAAAAGCTGAGGGAAAGCATAGAGCAACAGAACTGGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CCA 90 bp ACCCGGGCCGGGCGCCGGCGATCGCGGCGGCTCAGCAAGGCACCGTaGCTGGGGAAGACGAGCGCGATGCGGGACCGGGTGCAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: TRAGRRRSRRLSKAP*LGKTSAMRDRVQGW
Trigger: CCAGCCCTGCACCCGGTCCCGCATCGCGCTCGTCTTCCCCAGCCACGGTGCCTTGCTGAGCCGCCGCGATCGCCGGCGCCCGGCCCGGGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS GCA 90 bp CGCAGAGTGCCGCCTGGCACGCCGAAGTCGCGGCACACGCTGGCCTaGCGCTCACCGCCCTTGACGCGCTCGATGGCTTGCAGCTTGTCT +
Preference number: 5 (lower is better)
Translates to: RRVPPGTPKSRHTLA*RSPPLTRSMACSLS
Trigger: AGACAAGCTGCAAGCCATCGAGCGCGTCAAGGGCGGTGAGCGGCAGGCCAGCGTGTGCCGCGACTTCGGCGTGCCAGGCGGCACTCTGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS TCA 90 bp CTCCACCCAGCTGGTCCAAAAACCAGCGCAGCTTGGGCTCGTCCTTaGGCCAGCCGCGCAGAGTGCCGCCTGGCACGCCGAAGTCGCGGC +
Preference number: 5 (lower is better)
Translates to: LHPAGPKTSAAWARP*ASRAECRLARRSRG
Trigger: GCCGCGACTTCGGCGTGCCAGGCGGCACTCTGCGCGGCTGGCTCAAGGACGAGCCCAAGCTGCGCTGGTTTTTGGACCAGCTGGGTGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS GCA 90 bp GGCTGCCCGTCAGGTTGGCGGCCAGCAGTACTGTCACTCGGTCACTaGGCCAGCGTCGGCTGCACCCACCAGGCTCTTTGGAGTCCCCAG +
Preference number: 5 (lower is better)
Translates to: GCPSGWRPAVLSLGH*ASVGCTHQALWSPQ
Trigger: CTGGGGACTCCAAAGAGCCTGGTGGGTGCAGCCGACGCTGGCGCAGTGACCGAGTGACAGTACTGCTGGCCGCCAACCTGACGGGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS TCA 90 bp CGTCAGGTACGAGAACTGCGCCTGGTGACTGCGCCGGCTCCTCTTTaGCAGGCGCGGGGCCTGCGACCGGGGACTCAGCCTCACCATAGA +
Preference number: 5 (lower is better)
Translates to: RQVRELRLVTAPAPL*QARGLRPGTQPHHR
Trigger: TCTATGGTGAGGCTGAGTCCCCGGTCGCAGGCCCCGCGCCTGTCAAAGAGGAGCCGGCGCAGTCACCAGGCGCAGTTCTCGTACCTGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS GCA 90 bp TGGCGGCCAGCAGTACTGTCACTCGGTCACTGCGCCAGCGTCGGCTaGACCCACCAGGCTCTTTGGAGTCCCCAGTGCCCGGAGTTGAGG +
Preference number: 5 (lower is better)
Translates to: WRPAVLSLGHCASVG*THQALWSPQCPELR
Trigger: CCTCAACTCCGGGCACTGGGGACTCCAAAGAGCCTGGTGGGTGCAGCCGACGCTGGCGCAGTGACCGAGTGACAGTACTGCTGGCCGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CCA 90 bp CTCCTCCTCCTCCTCTCCAGCCCCGATGCTAGAGGGCAGGCTAGCTaGGGATGGAGGAGCAGCGGGGGCCACCTCTTCTCTGCAGCCTTC +
Preference number: 5 (lower is better)
Translates to: LLLLLSSPDARGQAS*GWRSSGGHLFSAAF
Trigger: GAAGGCTGCAGAGAAGAGGTGGCCCCCGCTGCTCCTCCATCCCCAGCTAGCCTGCCCTCTAGCATCGGGGCTGGAGAGGAGGAGGAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CCA 90 bp TGTAGATCTGCTCGTCGCCATAGCCGCCCTCGGAGTGGGGTAGAGTaGCTGGCGCGCCGTCAGGTACGAGAACTGCGCCTGGTGACTGCG +
Preference number: 5 (lower is better)
Translates to: CRSARRHSRPRSGVE*LARRQVRELRLVTA
Trigger: CGCAGTCACCAGGCGCAGTTCTCGTACCTGACGGCGCGCCAGCCACTCTACCCCACTCCGAGGGCGGCTATGGCGACGAGCAGATCTACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CCA 90 bp TCACTCGGTCACTGCGCCAGCGTCGGCTGCACCCACCAGGCTCTTTaGAGTCCCCAGTGCCCGGAGTTGAGGCCTGCTCCGGAAGTAACC +
Preference number: 5 (lower is better)
Translates to: SLGHCASVGCTHQAL*SPQCPELRPAPEVT
Trigger: GGTTACTTCCGGAGCAGGCCTCAACTCCGGGCACTGGGGACTCCAAAGAGCCTGGTGGGTGCAGCCGACGCTGGCGCAGTGACCGAGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS TCA 90 bp CCTGGTTGTGGTGACGCAGGCTGGGTGGGTCCGGTAGCTGCCCGATaGCTAGTGGTTTCAGCTTGTGGCTGCCCGTCAGGTTGGCGGCCA +
Preference number: 5 (lower is better)
Translates to: PGCGDAGWVGPVAAR*LVVSACGCPSGWRP
Trigger: TGGCCGCCAACCTGACGGGCAGCCACAAGCTGAAACCACTAGTCATCGGGCAGCTACCGGACCCACCCAGCCTGCGTCACCACAACCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS GCA 90 bp GCGCGGTCGATCTCCTCCTCGTTGGCCAGACGCATCTTCTTGCGCTaGGTGCCCACTTCTCCACCCAGCTGGTCCAAAAACCAGCGCAGC +
Preference number: 5 (lower is better)
Translates to: ARSISSSLARRIFLR*VPTSPPSWSKNQRS
Trigger: GCTGCGCTGGTTTTTGGACCAGCTGGGTGGAGAAGTGGGCACGCAGCGCAAGAAGATGCGTCTGGCCAACGAGGAGGAGATCGACCGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS GCA 90 bp TGCGCCAGCGTCGGCTGCACCCACCAGGCTCTTTGGAGTCCCCAGTaGCCGGAGTTGAGGCCTGCTCCGGAAGTAACCTCCAATAGAGAC +
Preference number: 5 (lower is better)
Translates to: CASVGCTHQALWSPQ*PELRPAPEVTSNRD
Trigger: GTCTCTATTGGAGGTTACTTCCGGAGCAGGCCTCAACTCCGGGCACTGGGGACTCCAAAGAGCCTGGTGGGTGCAGCCGACGCTGGCGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS GCA 90 bp GCTCAAAGGCTGCTCGCAGACCCAGCAGCCAGCAGCGCTCTATGCTaGCTGCCTGGACCAAGTCCCAAGAGAGGCCAGCCAGGTACAGCA +
Preference number: 5 (lower is better)
Translates to: AQRLLADPAASSALC*LPGPSPKRGQPGTA
Trigger: TGCTGTACCTGGCTGGCCTCTCTTGGGACTTGGTCCAGGCAGGCAGCATAGAGCGCTGCTGGCTGCTGGGTCTGCGAGCAGCCTTTGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS GCA 90 bp CAGGCTCAAAGGCTGCTCGCAGACCCAGCAGCCAGCAGCGCTCTATaGTGCCTGCCTGGACCAAGTCCCAAGAGAGGCCAGCCAGGTACA +
Preference number: 5 (lower is better)
Translates to: QAQRLLADPAASSAL*CLPGPSPKRGQPGT
Trigger: TGTACCTGGCTGGCCTCTCTTGGGACTTGGTCCAGGCAGGCAGCATAGAGCGCTGCTGGCTGCTGGGTCTGCGAGCAGCCTTTGAGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CCA 90 bp GCCAGACGCATCTTCTTGCGCTGCGTGCCCACTTCTCCACCCAGCTaGTCCAAAAACCAGCGCAGCTTGGGCTCGTCCTTGAGCCAGCCG +
Preference number: 5 (lower is better)
Translates to: ARRIFLRCVPTSPPS*SKNQRSLGSSLSQP
Trigger: CGGCTGGCTCAAGGACGAGCCCAAGCTGCGCTGGTTTTTGGACCAGCTGGGTGGAGAAGTGGGCACGCAGCGCAAGAAGATGCGTCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS GCA 90 bp AGACGGCGCGGTCGATCTCCTCCTCGTTGGCCAGACGCATCTTCTTaGGCTGCGTGCCCACTTCTCCACCCAGCTGGTCCAAAAACCAGC +
Preference number: 5 (lower is better)
Translates to: RRRGRSPPRWPDASS*AACPLLHPAGPKTS
Trigger: GCTGGTTTTTGGACCAGCTGGGTGGAGAAGTGGGCACGCAGCGCAAGAAGATGCGTCTGGCCAACGAGGAGGAGATCGACCGCGCCGTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS GCA 90 bp AAAGGCTGCTCGCAGACCCAGCAGCCAGCAGCGCTCTATGCTGCCTaGCTGGACCAAGTCCCAAGAGAGGCCAGCCAGGTACAGCATGTC +
Preference number: 5 (lower is better)
Translates to: KGCSQTQQPAALYAA*LDQVPREASQVQHV
Trigger: GACATGCTGTACCTGGCTGGCCTCTCTTGGGACTTGGTCCAGGCAGGCAGCATAGAGCGCTGCTGGCTGCTGGGTCTGCGAGCAGCCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CCA 90 bp CTGGGTGGGTCCGGTAGCTGCCCGATGACTAGTGGTTTCAGCTTGTaGCTGCCCGTCAGGTTGGCGGCCAGCAGTACTGTCACTCGGTCA +
Preference number: 5 (lower is better)
Translates to: LGGSGSCPMTSGFSL*LPVRLAASSTVTRS
Trigger: TGACCGAGTGACAGTACTGCTGGCCGCCAACCTGACGGGCAGCCACAAGCTGAAACCACTAGTCATCGGGCAGCTACCGGACCCACCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS TCA 90 bp CTCACCGCCCTTGACGCGCTCGATGGCTTGCAGCTTGTCTTTGATTaGGTAGGCCTTGCGGAAAGTCATCTTCACGGCCACCCGGGGCCG +
Preference number: 5 (lower is better)
Translates to: LTALDALDGLQLVFD*VGLAESHLHGHPGP
Trigger: CGGCCCCGGGTGGCCGTGAAGATGACTTTCCGCAAGGCCTACTCAATCAAAGACAAGCTGCAAGCCATCGAGCGCGTCAAGGGCGGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS TCA 90 bp CAGGGACAAATTCCTCGAAGAACCAGCCCCGAAGAAGCGGGCGACTaGGCCAGGCATCCGGACTGTAGCGGTAGGAGGCCGGGAACTTGT +
Preference number: 5 (lower is better)
Translates to: QGQIPRRTSPEEAGD*ARHPDCSGRRPGTC
Trigger: ACAAGTTCCCGGCCTCCTACCGCTACAGTCCGGATGCCTGGCTCAGTCGCCCGCTTCTTCGGGGCTGGTTCTTCGAGGAATTTGTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS GCA 90 bp GGTCGATCTCCTCCTCGTTGGCCAGACGCATCTTCTTGCGCTGCGTaGCCACTTCTCCACCCAGCTGGTCCAAAAACCAGCGCAGCTTGG +
Preference number: 5 (lower is better)
Translates to: GRSPPRWPDASSCAA*PLLHPAGPKTSAAW
Trigger: CCAAGCTGCGCTGGTTTTTGGACCAGCTGGGTGGAGAAGTGGGCACGCAGCGCAAGAAGATGCGTCTGGCCAACGAGGAGGAGATCGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS GCA 90 bp CCACTGGGCCACCTCTTCAGGTGCCAGGCGCTTGTAAGCCAGAGCTaGCAGATGTGTGAGGTCACTGAGCACCCTGCTGTGTTCGGCAGT +
Preference number: 5 (lower is better)
Translates to: PLGHLFRCQALVSQS*QMCEVTEHPAVFGS
Trigger: ACTGCCGAACACAGCAGGGTGCTCAGTGACCTCACACATCTGGCAGCTCTGGCTTACAAGCGCCTGGCACCTGAAGAGGTGGCCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CCA 90 bp CTGCCACCACGCCGTGCTCCAACGGTGCAGGGATGTGTGCTCGGCTaGTGCCCTTGGATAAGAAGAGCACTCGAACTGCACCATCAGGTG +
Preference number: 5 (lower is better)
Translates to: LPPRRAPTVQGCVLG*CPWIRRALELHHQV
Trigger: CACCTGATGGTGCAGTTCGAGTGCTCTTCTTATCCAAGGGCACCAGCCGAGCACACATCCCTGCACCGTTGGAGCACGGCGTGGTGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR CAA 90 bp GGGGCAAGTGAACTGGGATTCCTGAGTGAGGCCTGGTACACAGCAGGTGGCAATCACCCACCAGGCTCTTaGGAGTCCCCAGTGCCCGGA +
Preference number: 5 (lower is better)
Translates to: GASELGFLSEAWYTAGGNHPPGS*ESPVPG
Trigger: TCCGGGCACTGGGGACTCCAAAGAGCCTGGTGGGTG...ATTGCCACCTGCTGTGTACCAGGCCTCACTCAGGAATCCCAGTTCACTTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS GCA 90 bp AGGAGCTCGCGTTTGTACAAATGCTTGAAGGCTGCCACCACGCCGTaGTCCAACGGTGCAGGGATGTGTGCTCGGCTGGTGCCCTTGGAT +
Preference number: 5 (lower is better)
Translates to: RSSRLYKCLKAATTP*SNGAGMCARLVPLD
Trigger: ATCCAAGGGCACCAGCCGAGCACACATCCCTGCACCGTTGGAGCACGGCGTGGTGGCAGCCTTCAAGCATTTGTACAAACGCGAGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS GCA 90 bp CTGGCACAAGACACAGCAAGCCGCAGGAGCTCGCGTTTGTACAAATaGTTGAAGGCTGCCACCACGCCGTGCTCCAACGGTGCAGGGATG +
Preference number: 5 (lower is better)
Translates to: LAQDTASRRSSRLYK*LKAATTPCSNGAGM
Trigger: CATCCCTGCACCGTTGGAGCACGGCGTGGTGGCAGCCTTCAAGCATTTGTACAAACGCGAGCTCCTGCGGCTTGCTGTGTCTTGTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS TCA 90 bp CACAAGACACAGCAAGCCGCAGGAGCTCGCGTTTGTACAAATGCTTaGAGGCTGCCACCACGCCGTGCTCCAACGGTGCAGGGATGTGTG +
Preference number: 5 (lower is better)
Translates to: HKTQQAAGARVCTNA*RLPPRRAPTVQGCV
Trigger: CACACATCCCTGCACCGTTGGAGCACGGCGTGGTGGCAGCCTTCAAGCATTTGTACAAACGCGAGCTCCTGCGGCTTGCTGTGTCTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR CAA 90 bp CCTAGCAGAAAAGGCTGCCTGTACTTCCCAAGCCAAAGGATCACCACACTTTGGTGCCGCTCACCGCCCTaGACGCGCTCGATGGCTTGC +
Preference number: 5 (lower is better)
Translates to: PSRKGCLYFPSQRITTLWCRSPP*TRSMAC
Trigger: GCAAGCCATCGAGCGCGTCAAGGGCGGTGAGCGGCA...CCAAAGTGTGGTGATCCTTTGGCTTGGGAAGTACAGGCAGCCTTTTCTGCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR CAA 90 bp CCTAGCAGAAAAGGCTGCCTGTACTTCCCAAGCCAAAGGATCACCACACTTTGGAGCTTGGGCTCGTCCTaGAGCCAGCCGCGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: PSRKGCLYFPSQRITTLWSLGSS*SQPRRV
Trigger: CACTCTGCGCGGCTGGCTCAAGGACGAGCCCAAGCT...CCAAAGTGTGGTGATCCTTTGGCTTGGGAAGTACAGGCAGCCTTTTCTGCTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR CAA 90 bp AAGGCCCAGATCTGGCTCTCTGCAGATTTGAAAGCAGGTCTGTCAAAGCTGGATCCCCAGTGCCCGGAGTaGAGGCCTGCTCCGGAAGTA +
Preference number: 5 (lower is better)
Translates to: KAQIWLSADLKAGLSKLDPQCPE*RPAPEV
Trigger: TACTTCCGGAGCAGGCCTCAACTCCGGGCACTGGGG...ATCCAGCTTTGACAGACCTGCTTTCAAATCTGCAGAGAGCCAGATCTGGGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR CAA 90 bp AAGGCCCAGATCTGGCTCTCTGCAGATTTGAAAGCAGGTCTGTCAAAGCTGGATTGGCTGCCCGTCAGGTaGGCGGCCAGCAGTACTGTC +
Preference number: 5 (lower is better)
Translates to: KAQIWLSADLKAGLSKLDWLPVR*AASSTV
Trigger: GACAGTACTGCTGGCCGCCAACCTGACGGGCAGCCA...ATCCAGCTTTGACAGACCTGCTTTCAAATCTGCAGAGAGCCAGATCTGGGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR CAA 90 bp ACAAGGAGGACCGGGACAAAGGCTCTGGATGGAATTCCTGCAAAGACACAGTGCTACCAACACTCCTCCTaGTTCGGTGGCCTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: TRRTGTKALDGIPAKTQCYQHSS*FGGLLL
Trigger: GAGGAGGAGGCCACCGAACAAGGAGGAGTGTTGGTA...GCACTGTGTCTTTGCAGGAATTCCATCCAGAGCCTTTGTCCCGGTCCTCCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR CAA 90 bp CTAAACAAAGTGCTTTGTGGTTTGTCCTGCCCATTGATCCAAACACTTGCTAACCAGCCGTGGCTAGCCTaGAAGGTACACTCGGGGCCG +
Preference number: 5 (lower is better)
Translates to: LNKVLCGLSCPLIQTLANQPWLA*KVHSGP
Trigger: CGGCCCCGAGTGTACCTTCAAGGCTAGCCACGGCTG...GTTAGCAAGTGTTTGGATCAATGGGCAGGACAAACCACAAAGCACTTTGTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR CAA 90 bp GGAGTGGGAGGGACTAAAAATCCAAGTAGAACAGAATTTGCTATACTCTCTGCTTCGATCTCCTCCTCGTaGGCCAGACGCATCTTCTTG +
Preference number: 5 (lower is better)
Translates to: GVGGTKNPSRTEFAILSASISSS*ARRIFL
Trigger: CAAGAAGATGCGTCTGGCCAACGAGGAGGAGATCGA...AGCAGAGAGTATAGCAAATTCTGTTCTACTTGGATTTTTAGTCCCTCCCACTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS-3UTR CAA 90 bp GGAGTGGGAGGGACTAAAAATCCAAGTAGAACAGAATTTGCTATACTCTCTGCTCGTTTGTACAAATGCTaGAAGGCTGCCACCACGCCG +
Preference number: 5 (lower is better)
Translates to: GVGGTKNPSRTEFAILSARLYKC*KAATTP
Trigger: CGGCGTGGTGGCAGCCTTCAAGCATTTGTACAAACG...AGCAGAGAGTATAGCAAATTCTGTTCTACTTGGATTTTTAGTCCCTCCCACTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS GCA 72 bp TCAGCAAGGCACCGTGGCTGGGGAAGACGAGCGCGATaGGGGACCGGGTGCAGGGCTGGGCCGGCCGGAGGG +
Preference number: 6 (lower is better)
Translates to: SARHRGWGRRAR*GTGCRAGPAGG
Trigger: CCCTCCGGCCGGCCCAGCCCTGCACCCGGTCCCGCATCGCGCTCGTCTTCCCCAGCCACGGTGCCTTGCTGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS GCA 72 bp CCGCCTGGCACGCCGAAGTCGCGGCACACGCTGGCCTaGCGCTCACCGCCCTTGACGCGCTCGATGGCTTGC +
Preference number: 6 (lower is better)
Translates to: PPGTPKSRHTLA*RSPPLTRSMAC
Trigger: GCAAGCCATCGAGCGCGTCAAGGGCGGTGAGCGGCAGGCCAGCGTGTGCCGCGACTTCGGCGTGCCAGGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS TCA 72 bp CGAGAACTGCGCCTGGTGACTGCGCCGGCTCCTCTTTaGCAGGCGCGGGGCCTGCGACCGGGGACTCAGCCT +
Preference number: 6 (lower is better)
Translates to: RELRLVTAPAPL*QARGLRPGTQP
Trigger: AGGCTGAGTCCCCGGTCGCAGGCCCCGCGCCTGTCAAAGAGGAGCCGGCGCAGTCACCAGGCGCAGTTCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CAA 72 bp ACGAGAACTGCGCCTGGTGACTGCGCCGGCTCCTCTTaGACAGGCGCGGGGCCTGCGACCGGGGACTCAGCC +
Preference number: 6 (lower is better)
Translates to: TRTAPGDCAGSS*TGAGPATGDSA
Trigger: GGCTGAGTCCCCGGTCGCAGGCCCCGCGCCTGTCAAAGAGGAGCCGGCGCAGTCACCAGGCGCAGTTCTCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CCA 72 bp GCTCGTCGCCATAGCCGCCCTCGGAGTGGGGTAGAGTaGCTGGCGCGCCGTCAGGTACGAGAACTGCGCCTG +
Preference number: 6 (lower is better)
Translates to: ARRHSRPRSGVE*LARRQVRELRL
Trigger: CAGGCGCAGTTCTCGTACCTGACGGCGCGCCAGCCACTCTACCCCACTCCGAGGGCGGCTATGGCGACGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CCA 72 bp CACTGCGCCAGCGTCGGCTGCACCCACCAGGCTCTTTaGAGTCCCCAGTGCCCGGAGTTGAGGCCTGCTCCG +
Preference number: 6 (lower is better)
Translates to: HCASVGCTHQAL*SPQCPELRPAP
Trigger: CGGAGCAGGCCTCAACTCCGGGCACTGGGGACTCCAAAGAGCCTGGTGGGTGCAGCCGACGCTGGCGCAGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CAA 90 bp TCTCCACCCAGCTGGTCCAAAAACCAGCGCAGCTTGGGCTCGTCCTaGAGCCAGCCGCGCAGAGTGCCGCCTGGCACGCCGAAGTCGCGG +
Preference number: 6 (lower is better)
Translates to: SPPSWSKNQRSLGSS*SQPRRVPPGTPKSR
Trigger: CCGCGACTTCGGCGTGCCAGGCGGCACTCTGCGCGGCTGGCTCAAGGACGAGCCCAAGCTGCGCTGGTTTTTGGACCAGCTGGGTGGAGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS TCA 72 bp GCTGGTCCAAAAACCAGCGCAGCTTGGGCTCGTCCTTaGGCCAGCCGCGCAGAGTGCCGCCTGGCACGCCGA +
Preference number: 6 (lower is better)
Translates to: AGPKTSAAWARP*ASRAECRLARR
Trigger: TCGGCGTGCCAGGCGGCACTCTGCGCGGCTGGCTCAAGGACGAGCCCAAGCTGCGCTGGTTTTTGGACCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CAA 72 bp AGCTGGTCCAAAAACCAGCGCAGCTTGGGCTCGTCCTaGAGCCAGCCGCGCAGAGTGCCGCCTGGCACGCCG +
Preference number: 6 (lower is better)
Translates to: SWSKNQRSLGSS*SQPRRVPPGTP
Trigger: CGGCGTGCCAGGCGGCACTCTGCGCGGCTGGCTCAAGGACGAGCCCAAGCTGCGCTGGTTTTTGGACCAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CAA 72 bp TCACTGCGCCAGCGTCGGCTGCACCCACCAGGCTCTTaGGAGTCCCCAGTGCCCGGAGTTGAGGCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: SLRQRRLHPPGS*ESPVPGVEACS
Trigger: GGAGCAGGCCTCAACTCCGGGCACTGGGGACTCCAAAGAGCCTGGTGGGTGCAGCCGACGCTGGCGCAGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CAA 90 bp TGCGTGCCCACTTCTCCACCCAGCTGGTCCAAAAACCAGCGCAGCTaGGGCTCGTCCTTGAGCCAGCCGCGCAGAGTGCCGCCTGGCACG +
Preference number: 6 (lower is better)
Translates to: CVPTSPPSWSKNQRS*GSSLSQPRRVPPGT
Trigger: CGTGCCAGGCGGCACTCTGCGCGGCTGGCTCAAGGACGAGCCCAAGCTGCGCTGGTTTTTGGACCAGCTGGGTGGAGAAGTGGGCACGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS TCA 72 bp CTGGCCCGGATAGCGGCACACCGTGCTGGCGCAAGGTaGGGAACCACGAGTAGACGGCGCGGTCGATCTCCT +
Preference number: 6 (lower is better)
Translates to: LARIAAHRAGAR*GTTSRRRGRSP
Trigger: AGGAGATCGACCGCGCCGTCTACTCGTGGTTCCTCACCTTGCGCCAGCACGGTGTGCCGCTATCCGGGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CCA 72 bp CTCCTCTCCAGCCCCGATGCTAGAGGGCAGGCTAGCTaGGGATGGAGGAGCAGCGGGGGCCACCTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: LLSSPDARGQAS*GWRSSGGHLFS
Trigger: AGAGAAGAGGTGGCCCCCGCTGCTCCTCCATCCCCAGCTAGCCTGCCCTCTAGCATCGGGGCTGGAGAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CAA 90 bp GTCACTCGGTCACTGCGCCAGCGTCGGCTGCACCCACCAGGCTCTTaGGAGTCCCCAGTGCCCGGAGTTGAGGCCTGCTCCGGAAGTAAC +
Preference number: 6 (lower is better)
Translates to: VTRSLRQRRLHPPGS*ESPVPGVEACSGSN
Trigger: GTTACTTCCGGAGCAGGCCTCAACTCCGGGCACTGGGGACTCCAAAGAGCCTGGTGGGTGCAGCCGACGCTGGCGCAGTGACCGAGTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS GCA 72 bp TCAGGTTGGCGGCCAGCAGTACTGTCACTCGGTCACTaGGCCAGCGTCGGCTGCACCCACCAGGCTCTTTGG +
Preference number: 6 (lower is better)
Translates to: SGWRPAVLSLGH*ASVGCTHQALW
Trigger: CCAAAGAGCCTGGTGGGTGCAGCCGACGCTGGCGCAGTGACCGAGTGACAGTACTGCTGGCCGCCAACCTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS GCA 72 bp AGGCTGCTCGCAGACCCAGCAGCCAGCAGCGCTCTATaGTGCCTGCCTGGACCAAGTCCCAAGAGAGGCCAG +
Preference number: 6 (lower is better)
Translates to: RLLADPAASSAL*CLPGPSPKRGQ
Trigger: CTGGCCTCTCTTGGGACTTGGTCCAGGCAGGCAGCATAGAGCGCTGCTGGCTGCTGGGTCTGCGAGCAGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS TCA 72 bp GGTGACGCAGGCTGGGTGGGTCCGGTAGCTGCCCGATaGCTAGTGGTTTCAGCTTGTGGCTGCCCGTCAGGT +
Preference number: 6 (lower is better)
Translates to: GDAGWVGPVAAR*LVVSACGCPSG
Trigger: ACCTGACGGGCAGCCACAAGCTGAAACCACTAGTCATCGGGCAGCTACCGGACCCACCCAGCCTGCGTCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS TCA 72 bp ATTCCTCGAAGAACCAGCCCCGAAGAAGCGGGCGACTaGGCCAGGCATCCGGACTGTAGCGGTAGGAGGCCG +
Preference number: 6 (lower is better)
Translates to: IPRRTSPEEAGD*ARHPDCSGRRP
Trigger: CGGCCTCCTACCGCTACAGTCCGGATGCCTGGCTCAGTCGCCCGCTTCTTCGGGGCTGGTTCTTCGAGGAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS GCA 72 bp TACCTGGTGAGCTGGCTGCTGCCCAGGCTCAAAGGCTaGTCGCAGACCCAGCAGCCAGCAGCGCTCTATGCT +
Preference number: 6 (lower is better)
Translates to: YLVSWLLPRLKG*SQTQQPAALYA
Trigger: AGCATAGAGCGCTGCTGGCTGCTGGGTCTGCGAGCAGCCTTTGAGCCTGGGCAGCAGCCAGCTCACCAGGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS GCA 72 bp CTGGGGATGGAGGAGCAGCGGGGGCCACCTCTTCTCTaGAGCCTTCCGGAAGGCCTCCATCATCATCCAGGT +
Preference number: 6 (lower is better)
Translates to: LGMEEQRGPPLL*SLPEGLHHHPG
Trigger: ACCTGGATGATGATGGAGGCCTTCCGGAAGGCTGCAGAGAAGAGGTGGCCCCCGCTGCTCCTCCATCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CCA 72 bp CCTGCTGTGTTCGGCAGTCTCCTCTACCTGGTGAGCTaGCTGCTGCCCAGGCTCAAAGGCTGCTCGCAGACC +
Preference number: 6 (lower is better)
Translates to: PAVFGSLLYLVS*LLPRLKGCSQT
Trigger: GGTCTGCGAGCAGCCTTTGAGCCTGGGCAGCAGCCAGCTCACCAGGTAGAGGAGACTGCCGAACACAGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CAA 72 bp ACTTCTCCACCCAGCTGGTCCAAAAACCAGCGCAGCTaGGGCTCGTCCTTGAGCCAGCCGCGCAGAGTGCCG +
Preference number: 6 (lower is better)
Translates to: TSPPSWSKNQRS*GSSLSQPRRVP
Trigger: CGGCACTCTGCGCGGCTGGCTCAAGGACGAGCCCAAGCTGCGCTGGTTTTTGGACCAGCTGGGTGGAGAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CAA 72 bp CGGTCGATCTCCTCCTCGTTGGCCAGACGCATCTTCTaGCGCTGCGTGCCCACTTCTCCACCCAGCTGGTCC +
Preference number: 6 (lower is better)
Translates to: RSISSSLARRIF*RCVPTSPPSWS
Trigger: GGACCAGCTGGGTGGAGAAGTGGGCACGCAGCGCAAGAAGATGCGTCTGGCCAACGAGGAGGAGATCGACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CAA 90 bp AGCTGCCCGATGACTAGTGGTTTCAGCTTGTGGCTGCCCGTCAGGTaGGCGGCCAGCAGTACTGTCACTCGGTCACTGCGCCAGCGTCGG +
Preference number: 6 (lower is better)
Translates to: SCPMTSGFSLWLPVR*AASSTVTRSLRQRR
Trigger: CCGACGCTGGCGCAGTGACCGAGTGACAGTACTGCTGGCCGCCAACCTGACGGGCAGCCACAAGCTGAAACCACTAGTCATCGGGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CAA 90 bp AGGCTGGGTGGGTCCGGTAGCTGCCCGATGACTAGTGGTTTCAGCTaGTGGCTGCCCGTCAGGTTGGCGGCCAGCAGTACTGTCACTCGG +
Preference number: 6 (lower is better)
Translates to: RLGGSGSCPMTSGFS*WLPVRLAASSTVTR
Trigger: CCGAGTGACAGTACTGCTGGCCGCCAACCTGACGGGCAGCCACAAGCTGAAACCACTAGTCATCGGGCAGCTACCGGACCCACCCAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS GCA 72 bp GGTCGATCTCCTCCTCGTTGGCCAGACGCATCTTCTTaGGCTGCGTGCCCACTTCTCCACCCAGCTGGTCCA +
Preference number: 6 (lower is better)
Translates to: GRSPPRWPDASS*AACPLLHPAGP
Trigger: TGGACCAGCTGGGTGGAGAAGTGGGCACGCAGCGCAAGAAGATGCGTCTGGCCAACGAGGAGGAGATCGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CCA 72 bp ACCACGAGTAGACGGCGCGGTCGATCTCCTCCTCGTTaGCCAGACGCATCTTCTTGCGCTGCGTGCCCACTT +
Preference number: 6 (lower is better)
Translates to: TTSRRRGRSPPR*PDASSCAACPL
Trigger: AAGTGGGCACGCAGCGCAAGAAGATGCGTCTGGCCAACGAGGAGGAGATCGACCGCGCCGTCTACTCGTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CAA 72 bp AAGTCGCGGCACACGCTGGCCTGCCGCTCACCGCCCTaGACGCGCTCGATGGCTTGCAGCTTGTCTTTGATT +
Preference number: 6 (lower is better)
Translates to: KSRHTLACRSPP*TRSMACSLSLI
Trigger: AATCAAAGACAAGCTGCAAGCCATCGAGCGCGTCAAGGGCGGTGAGCGGCAGGCCAGCGTGTGCCGCGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CAA 72 bp GGGTCCGGTAGCTGCCCGATGACTAGTGGTTTCAGCTaGTGGCTGCCCGTCAGGTTGGCGGCCAGCAGTACT +
Preference number: 6 (lower is better)
Translates to: GSGSCPMTSGFS*WLPVRLAASST
Trigger: AGTACTGCTGGCCGCCAACCTGACGGGCAGCCACAAGCTGAAACCACTAGTCATCGGGCAGCTACCGGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CAA 90 bp GGGGAGCCACTGGCACAAGACACAGCAAGCCGCAGGAGCTCGCGTTaGTACAAATGCTTGAAGGCTGCCACCACGCCGTGCTCCAACGGT +
Preference number: 6 (lower is better)
Translates to: GEPLAQDTASRRSSR*YKCLKAATTPCSNG
Trigger: ACCGTTGGAGCACGGCGTGGTGGCAGCCTTCAAGCATTTGTACAAACGCGAGCTCCTGCGGCTTGCTGTGTCTTGTGCCAGTGGCTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS TCA 72 bp CCTTCTGTTGCAGGCAGCTTCGGCGCAGGTAGCGCTTaGCGCCAGGGACAAATTCCTCGAAGAACCAGCCCC +
Preference number: 6 (lower is better)
Translates to: PSVAGSFGAGSA*RQGQIPRRTSP
Trigger: GGGGCTGGTTCTTCGAGGAATTTGTCCCTGGCGTCAAGCGCTACCTGCGCCGAAGCTGCCTGCAACAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS TCA 72 bp CAGCAAGCCGCAGGAGCTCGCGTTTGTACAAATGCTTaGAGGCTGCCACCACGCCGTGCTCCAACGGTGCAG +
Preference number: 6 (lower is better)
Translates to: QQAAGARVCTNA*RLPPRRAPTVQ
Trigger: CTGCACCGTTGGAGCACGGCGTGGTGGCAGCCTTCAAGCATTTGTACAAACGCGAGCTCCTGCGGCTTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS GCA 72 bp CCTCCTCGTTGGCCAGACGCATCTTCTTGCGCTGCGTaGCCACTTCTCCACCCAGCTGGTCCAAAAACCAGC +
Preference number: 6 (lower is better)
Translates to: PPRWPDASSCAA*PLLHPAGPKTS
Trigger: GCTGGTTTTTGGACCAGCTGGGTGGAGAAGTGGGCACGCAGCGCAAGAAGATGCGTCTGGCCAACGAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CCA 72 bp TCCGGTAGCTGCCCGATGACTAGTGGTTTCAGCTTGTaGCTGCCCGTCAGGTTGGCGGCCAGCAGTACTGTC +
Preference number: 6 (lower is better)
Translates to: SGSCPMTSGFSL*LPVRLAASSTV
Trigger: GACAGTACTGCTGGCCGCCAACCTGACGGGCAGCCACAAGCTGAAACCACTAGTCATCGGGCAGCTACCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CCA 72 bp TGCACAAGCCTCAGCGGCCCCACTTCTCTGGGATCCTaGCTCTCTAGCCACCTCAGAGCTGTCTCTAGTCCC +
Preference number: 6 (lower is better)
Translates to: CTSLSGPTSLGS*LSSHLRAVSSP
Trigger: GGGACTAGAGACAGCTCTGAGGTGGCTAGAGAGCCAGGATCCCAGAGAAGTGGGGCCGCTGAGGCTTGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS GCA 72 bp CGTTTGTACAAATGCTTGAAGGCTGCCACCACGCCGTaGTCCAACGGTGCAGGGATGTGTGCTCGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: RLYKCLKAATTP*SNGAGMCARLV
Trigger: CACCAGCCGAGCACACATCCCTGCACCGTTGGAGCACGGCGTGGTGGCAGCCTTCAAGCATTTGTACAAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS GCA 72 bp GACACAGCAAGCCGCAGGAGCTCGCGTTTGTACAAATaGTTGAAGGCTGCCACCACGCCGTGCTCCAACGGT +
Preference number: 6 (lower is better)
Translates to: DTASRRSSRLYK*LKAATTPCSNG
Trigger: ACCGTTGGAGCACGGCGTGGTGGCAGCCTTCAAGCATTTGTACAAACGCGAGCTCCTGCGGCTTGCTGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS GCA 72 bp CACCTCTTCAGGTGCCAGGCGCTTGTAAGCCAGAGCTaGCAGATGTGTGAGGTCACTGAGCACCCTGCTGTG +
Preference number: 6 (lower is better)
Translates to: HLFRCQALVSQS*QMCEVTEHPAV
Trigger: CACAGCAGGGTGCTCAGTGACCTCACACATCTGGCAGCTCTGGCTTACAAGCGCCTGGCACCTGAAGAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CCA 72 bp ATCTTCTTGCGCTGCGTGCCCACTTCTCCACCCAGCTaGTCCAAAAACCAGCGCAGCTTGGGCTCGTCCTTG +
Preference number: 6 (lower is better)
Translates to: IFLRCVPTSPPS*SKNQRSLGSSL
Trigger: CAAGGACGAGCCCAAGCTGCGCTGGTTTTTGGACCAGCTGGGTGGAGAAGTGGGCACGCAGCGCAAGAAGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CCA 72 bp AACGTAGCTGCACAAGCCTCAGCGGCCCCACTTCTCTaGGATCCTGGCTCTCTAGCCACCTCAGAGCTGTCT +
Preference number: 6 (lower is better)
Translates to: NVAAQASAAPLL*DPGSLATSELS
Trigger: AGACAGCTCTGAGGTGGCTAGAGAGCCAGGATCCCAGAGAAGTGGGGCCGCTGAGGCTTGTGCAGCTACGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CAA 72 bp ATGACTAGTGGTTTCAGCTTGTGGCTGCCCGTCAGGTaGGCGGCCAGCAGTACTGTCACTCGGTCACTGCGC +
Preference number: 6 (lower is better)
Translates to: MTSGFSLWLPVR*AASSTVTRSLR
Trigger: GCGCAGTGACCGAGTGACAGTACTGCTGGCCGCCAACCTGACGGGCAGCCACAAGCTGAAACCACTAGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CAA 72 bp ACAGCAAGCCGCAGGAGCTCGCGTTTGTACAAATGCTaGAAGGCTGCCACCACGCCGTGCTCCAACGGTGCA +
Preference number: 6 (lower is better)
Translates to: TASRRSSRLYKC*KAATTPCSNGA
Trigger: TGCACCGTTGGAGCACGGCGTGGTGGCAGCCTTCAAGCATTTGTACAAACGCGAGCTCCTGCGGCTTGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CAA 72 bp CTGGCACAAGACACAGCAAGCCGCAGGAGCTCGCGTTaGTACAAATGCTTGAAGGCTGCCACCACGCCGTGC +
Preference number: 6 (lower is better)
Translates to: LAQDTASRRSSR*YKCLKAATTPC
Trigger: GCACGGCGTGGTGGCAGCCTTCAAGCATTTGTACAAACGCGAGCTCCTGCGGCTTGCTGTGTCTTGTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CAA 90 bp GCACAAGACACAGCAAGCCGCAGGAGCTCGCGTTTGTACAAATGCTaGAAGGCTGCCACCACGCCGTGCTCCAACGGTGCAGGGATGTGT +
Preference number: 6 (lower is better)
Translates to: AQDTASRRSSRLYKC*KAATTPCSNGAGMC
Trigger: ACACATCCCTGCACCGTTGGAGCACGGCGTGGTGGCAGCCTTCAAGCATTTGTACAAACGCGAGCTCCTGCGGCTTGCTGTGTCTTGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CAA 90 bp GCCTGGACCAAGTCCCAAGAGAGGCCAGCCAGGTACAGCATGTCCTaGAGAACGAAGCTTCTCATGAAGTCCAGAGGGGAGCCACTGGCA +
Preference number: 6 (lower is better)
Translates to: AWTKSQERPARYSMS*RTKLLMKSRGEPLA
Trigger: TGCCAGTGGCTCCCCTCTGGACTTCATGAGAAGCTTCGTTCTCAAGGACATGCTGTACCTGGCTGGCCTCTCTTGGGACTTGGTCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS CCA 72 bp CCAACGGTGCAGGGATGTGTGCTCGGCTGGTGCCCTTaGATAAGAAGAGCACTCGAACTGCACCATCAGGTG +
Preference number: 6 (lower is better)
Translates to: PTVQGCVLGWCP*IRRALELHHQV
Trigger: CACCTGATGGTGCAGTTCGAGTGCTCTTCTTATCCAAGGGCACCAGCCGAGCACACATCCCTGCACCGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2
CDS TCA 72 bp CTTGACGCGCTCGATGGCTTGCAGCTTGTCTTTGATTaGGTAGGCCTTGCGGAAAGTCATCTTCACGGCCAC +
Preference number: 6 (lower is better)
Translates to: LDALDGLQLVFD*VGLAESHLHGH
Trigger: GTGGCCGTGAAGATGACTTTCCGCAAGGCCTACTCAATCAAAGACAAGCTGCAAGCCATCGAGCGCGTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000192937.2