Pregenerated sensors for TIGD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047819Ensembl transcript IDs: ENSMUST00000062623.4
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGGTGTTCCTCCACCCACTCAAGCACTCCCACCTCCCCGCCCTTaGTTCTCCTACACTGGGGCATCTATCCAGCCTTCAGAGGACCAA | + |
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Preference number: 1 (lower is better) Translates to: EGVPPPTQALPPPRP*FSYTGASIQPSEDQ Trigger: TTGGTCCTCTGAAGGCTGGATAGATGCCCCAGTGTAGGAGAACCAAGGGCGGGGAGGTGGGAGTGCTTGAGTGGGTGGAGGAACACCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| 3UTR TCA 90 bp | TATCCAGCCTTCAGAGGACCAAGGACTGCTCCTCCTATTGATGCCTaGCAAGACCATCCTCTGCTACATATGCAGCTGGAGTCTTGTGTA | + |
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Preference number: 1 (lower is better) Translates to: YPAFRGPRTAPPIDA*QDHPLLHMQLESCV Trigger: TACACAAGACTCCAGCTGCATATGTAGCAGAGGATGGTCTTGTCAGGCATCAATAGGAGGAGCAGTCCTTGGTCCTCTGAAGGCTGGATA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| 3UTR-3UTR GCA 90 bp | CCCACAAGTTTTCTTCTTGGTGATTCTAAGTGGGTCTTCAATTGCCTCCCTATTCCAAGGCAGGAGCACTaGCATGAATCTGGGGCAACT | + |
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Preference number: 2 (lower is better) Translates to: PTSFLLGDSKWVFNCLPIPRQEH*HESGAT Trigger: AGTTGCCCCAGATTCATGGCAGTGCTCCTGCCTTGG...AATAGGGAGGCAATTGAAGACCCACTTAGAATCACCAAGAAGAAAACTTGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| 3UTR CAA 90 bp | AGCTTTCTCTTTTCTTGTTTAAGCGATACTTTCTGTTTACATTCCTaGGGTAATAAGATACCCGAGGAAAAGTTACTGCTCTGCAGCCGA | + |
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Preference number: 2 (lower is better) Translates to: SFLFSCLSDTFCLHS*GNKIPEEKLLLCSR Trigger: TCGGCTGCAGAGCAGTAACTTTTCCTCGGGTATCTTATTACCCAAGGAATGTAAACAGAAAGTATCGCTTAAACAAGAAAAGAGAAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| 3UTR-3UTR GCA 90 bp | ACTGCCATGAATCTGGGGCAACTTGGATTACACAGTGAGACCCTTTCTTTAAAAAAGATAATGAAAACCTaGAATTTCATGCGCGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: TAMNLGQLGLHSETLSLKKIMKT*NFMRVS Trigger: ACTCACGCGCATGAAATTGCAGGTTTTCATTATCTT...TTTTAAAGAAAGGGTCTCACTGTGTAATCCAAGTTGCCCCAGATTCATGGCAGT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| 3UTR CCA 72 bp | AGCACTCCCACCTCCCCGCCCTTGGTTCTCCTACACTaGGGCATCTATCCAGCCTTCAGAGGACCAAGGACT | + |
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Preference number: 3 (lower is better) Translates to: STPTSPPLVLLH*GIYPAFRGPRT Trigger: AGTCCTTGGTCCTCTGAAGGCTGGATAGATGCCCCAGTGTAGGAGAACCAAGGGCGGGGAGGTGGGAGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| 3UTR-3UTR CAA 90 bp | GCACACACACATGCACAGCAGAAGGACCCCTCTCTCCTGGTGATAGAAGGCAGACGACAATCCCAGCATTaGAGAGGCCAAGGCAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: AHTHAQQKDPSLLVIEGRRQSQH*RGQGRS Trigger: GCTCCTGCCTTGGCCTCTCAAATGCTGGGATTGTCG...TCTGCCTTCTATCACCAGGAGAGAGGGGTCCTTCTGCTGTGCATGTGTGTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| 3UTR TCA 72 bp | GAAACCCCCATCCCATTCTCCCTCTACCTGCTTCTATaGGGGTGTTCCTCCACCCACTCAAGCACTCCCACC | + |
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Preference number: 3 (lower is better) Translates to: ETPIPFSLYLLL*GCSSTHSSTPT Trigger: GGTGGGAGTGCTTGAGTGGGTGGAGGAACACCCTCATAGAAGCAGGTAGAGGGAGAATGGGATGGGGGTTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| 3UTR TCA 72 bp | TTCAGAGGACCAAGGACTGCTCCTCCTATTGATGCCTaGCAAGACCATCCTCTGCTACATATGCAGCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: FRGPRTAPPIDA*QDHPLLHMQLE Trigger: CTCCAGCTGCATATGTAGCAGAGGATGGTCTTGTCAGGCATCAATAGGAGGAGCAGTCCTTGGTCCTCTGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| 3UTR-3UTR CAA 90 bp | TCTCCTACACTGGGGCATCTATCCAGCCTTCAGAGGACCAAGGACTGCTCCTCCTATGCAGCTGGAGTCTaGTGTACTCAAAAACAAAAC | + |
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Preference number: 3 (lower is better) Translates to: SPTLGHLSSLQRTKDCSSYAAGV*CTQKQN Trigger: GTTTTGTTTTTGAGTACACAAGACTCCAGCTGCATA...GGAGGAGCAGTCCTTGGTCCTCTGAAGGCTGGATAGATGCCCCAGTGTAGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| 3UTR GCA 72 bp | TCAAGTATTTTCCCACTAAACAAGCGCACACACACATaGACAGCAGAAGGACCCCTCTCTCCTGGTGATAGA | + |
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Preference number: 3 (lower is better) Translates to: SSIFPLNKRTHT*TAEGPLSPGDR Trigger: TCTATCACCAGGAGAGAGGGGTCCTTCTGCTGTGCATGTGTGTGTGCGCTTGTTTAGTGGGAAAATACTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| 3UTR-3UTR CAA 90 bp | CCCTTCAAGTATTTTCCCACTAAACAAGCGCACACACACATGCACAGCAGAAGGACATTGTTCATCATCTaGGTGCACAGCAGCTTAGAA | + |
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Preference number: 3 (lower is better) Translates to: PFKYFPTKQAHTHMHSRRTLFII*VHSSLE Trigger: TTCTAAGCTGCTGTGCACCAAGATGATGAACAATGT...CCTTCTGCTGTGCATGTGTGTGTGCGCTTGTTTAGTGGGAAAATACTTGAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| 3UTR GCA 72 bp | CTATTGATGCCTGACAAGACCATCCTCTGCTACATATaGAGCTGGAGTCTTGTGTACTCAAAAACAAAACTA | + |
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Preference number: 3 (lower is better) Translates to: LLMPDKTILCYI*SWSLVYSKTKL Trigger: TAGTTTTGTTTTTGAGTACACAAGACTCCAGCTGCATATGTAGCAGAGGATGGTCTTGTCAGGCATCAATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR TCA 90 bp | GCACACACACATGCACAGCAGAAGGACCCCTCTCTCCTGGTGATAGAAGGCAGACTCGGTTTTTCCCGATaGTCAGCAAAGGGAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: AHTHAQQKDPSLLVIEGRLGFSR*SAKGAS Trigger: AGAAGCTCCCTTTGCTGATCATCGGGAAAAACCGAG...TCTGCCTTCTATCACCAGGAGAGAGGGGTCCTTCTGCTGTGCATGTGTGTGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR TCA 90 bp | GGCCAAGGCAGGAGCACTGCCATGAATCTGGGGCAACTTGGATTACACAGTGAGCTCCCTTTGGAGACCTaGATCCTGCTTCTTCATAGC | + |
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Preference number: 4 (lower is better) Translates to: GQGRSTAMNLGQLGLHSELPLET*ILLLHS Trigger: GCTATGAAGAAGCAGGATTCAGGTCTCCAAAGGGAG...CTCACTGTGTAATCCAAGTTGCCCCAGATTCATGGCAGTGCTCCTGCCTTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR GCA 90 bp | GCGCGTGAGTCAGCCAGCTGGCGTTCTTTCACACACATGCTAAGTTTCTTTCAAAAGAAACTCCACTCCTaGCCCCACTGCATGGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: ARESASWRSFTHMLSFFQKKLHS*PHCMGS Trigger: ACTGCCCATGCAGTGGGGGCAGGAGTGGAGTTTCTT...TTGAAAGAAACTTAGCATGTGTGTGAAAGAACGCCAGCTGGCTGACTCACGCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR GCA 90 bp | GGCCAAGGCAGGAGCACTGCCATGAATCTGGGGCAACTTGGATTACACAGTGAGACCTTGATTCATAGCTaGAAACCCGGAAGACAAGCA | + |
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Preference number: 4 (lower is better) Translates to: GQGRSTAMNLGQLGLHSETLIHS*KPGRQA Trigger: TGCTTGTCTTCCGGGTTTGCAGCTATGAATCAAGGT...CTCACTGTGTAATCCAAGTTGCCCCAGATTCATGGCAGTGCTCCTGCCTTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR CCA 90 bp | GCAGTTTTACTTAGTCATTCTTTACTAGGGAGCCCCCGCTATGCAGATCAAAGGAGAGCGCGTCCTTCTTaGATGGTGACGGCAGATCCA | + |
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Preference number: 4 (lower is better) Translates to: AVLLSHSLLGSPRYADQRRARPS*MVTADP Trigger: TGGATCTGCCGTCACCATCCAAGAAGGACGCGCTCT...CCTTTGATCTGCATAGCGGGGGCTCCCTAGTAAAGAATGACTAAGTAAAACTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR TCA 90 bp | GCGCGTGAGTCAGCCAGCTGGCGTTCTTTCACACACATGCTAAGTTTCTTTCAAGCACAACTTTCCAACTaGGCATGTTTCCCCTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: ARESASWRSFTHMLSFFQAQLSN*ACFPFE Trigger: TTCAAAGGGGAAACATGCTCAGTTGGAAAGTTGTGC...TTGAAAGAAACTTAGCATGTGTGTGAAAGAACGCCAGCTGGCTGACTCACGCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR GCA 90 bp | AGTATTTTCCCACTAAACAAGCGCACACACACATGCACAGCAGAAGGACCCCTCGCTCTCCAGCAGAGATaGAATGTATCAACTGCATCT | + |
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Preference number: 4 (lower is better) Translates to: SIFPLNKRTHTCTAEGPLALQQR*NVSTAS Trigger: AGATGCAGTTGATACATTGCATCTCTGCTGGAGAGC...GAGGGGTCCTTCTGCTGTGCATGTGTGTGTGCGCTTGTTTAGTGGGAAAATACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR CCA 90 bp | AGTATTTTCCCACTAAACAAGCGCACACACACATGCACAGCAGAAGGACCCCTCCTTCGTTTCTGGGCTTaGAATTTCTCATCCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SIFPLNKRTHTCTAEGPLLRFWA*NFSSSF Trigger: GAAGCTGGATGAGAAATTCCAAGCCCAGAAACGAAG...GAGGGGTCCTTCTGCTGTGCATGTGTGTGTGCGCTTGTTTAGTGGGAAAATACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR CCA 90 bp | CCTTCAAGTATTTTCCCACTAAACAAGCGCACACACACATGCACAGCAGAAGGATCGGCATCATCTTTCTaGGTGGCTTCACAAGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: PSSIFPLNKRTHTCTAEGSASSF*VASQVS Trigger: GGAGACTTGTGAAGCCACCCAGAAAGATGATGCCGA...TCCTTCTGCTGTGCATGTGTGTGTGCGCTTGTTTAGTGGGAAAATACTTGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR CCA 90 bp | TGGTTCTCCTACACTGGGGCATCTATCCAGCCTTCAGAGGACCAAGGACTGCTCAGAATGCCAACTCAATaGACTTTAGGTTTTTCACTT | + |
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Preference number: 4 (lower is better) Translates to: WFSYTGASIQPSEDQGLLRMPTQ*TLGFSL Trigger: AAGTGAAAAACCTAAAGTCCATTGAGTTGGCATTCT...GAGCAGTCCTTGGTCCTCTGAAGGCTGGATAGATGCCCCAGTGTAGGAGAACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR TCA 90 bp | CATATTGGCTTATACCGACAATCCCAGCATTTGAGAGGCCAAGGCAGGAGCACTTTTCCACTGCATTTATaGTGTCAATCTTCTCCTCGA | + |
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Preference number: 4 (lower is better) Translates to: HIGLYRQSQHLRGQGRSTFPLHL*CQSSPR Trigger: TCGAGGAGAAGATTGACATCATAAATGCAGTGGAAA...AGTGCTCCTGCCTTGGCCTCTCAAATGCTGGGATTGTCGGTATAAGCCAATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR TCA 90 bp | ACTTTCTGTTTACATTCCTTGGGTAATAAGATACCCGAGGAAAAGTTACTGCTCCCCGGAAGACAAGCATaGCGGGAAGAATGCCAACTC | + |
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Preference number: 4 (lower is better) Translates to: TFCLHSLGNKIPEEKLLLPGRQA*REECQL Trigger: GAGTTGGCATTCTTCCCGTCATGCTTGTCTTCCGGG...GAGCAGTAACTTTTCCTCGGGTATCTTATTACCCAAGGAATGTAAACAGAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR GCA 90 bp | GCGCGTGAGTCAGCCAGCTGGCGTTCTTTCACACACATGCTAAGTTTCTTTCAATGGAGACCTGAATCCTaGTTCTTCATAGCTTTTAAC | + |
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Preference number: 4 (lower is better) Translates to: ARESASWRSFTHMLSFFQWRPES*FFIAFN Trigger: GTTAAAAGCTATGAAGAAGCAGGATTCAGGTCTCCA...TTGAAAGAAACTTAGCATGTGTGTGAAAGAACGCCAGCTGGCTGACTCACGCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR CCA 90 bp | CATATTGGCTTATACCGACAATCCCAGCATTTGAGAGGCCAAGGCAGGAGCACTTTTAACAATAGTCTCTaGAGTTACAGCTCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: HIGLYRQSQHLRGQGRSTFNNSL*SYSSPA Trigger: TGCTGGAGAGCTGTAACTCCAGAGACTATTGTTAAA...AGTGCTCCTGCCTTGGCCTCTCAAATGCTGGGATTGTCGGTATAAGCCAATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR CCA 90 bp | GCAGTTTTACTTAGTCATTCTTTACTAGGGAGCCCCCGCTATGCAGATCAAAGGCAATCTTCTCCTCGATaGACAGGCTCTTCTTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: AVLLSHSLLGSPRYADQRQSSPR*TGSSFS Trigger: AGAAAAAGAAGAGCCTGTCCATCGAGGAGAAGATTG...CCTTTGATCTGCATAGCGGGGGCTCCCTAGTAAAGAATGACTAAGTAAAACTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR CCA 90 bp | CCCTTCAAGTATTTTCCCACTAAACAAGCGCACACACACATGCACAGCAGAAGGTTGTGTCCCAGCTTCTaGGCAAAATCATTAGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: PFKYFPTKQAHTHMHSRRLCPSF*AKSLAF Trigger: AAAAGCTAATGATTTTGCCCAGAAGCTGGGACACAA...CCTTCTGCTGTGCATGTGTGTGTGCGCTTGTTTAGTGGGAAAATACTTGAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR GCA 90 bp | CCCACAAGTTTTCTTCTTGGTGATTCTAAGTGGGTCTTCAATTGCCTCCCTATTGCGTTATCCTGTCTTTaGACAACTTTCCAACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: PTSFLLGDSKWVFNCLPIALSCL*TTFQLS Trigger: GCTCAGTTGGAAAGTTGTGCAAAGACAGGATAACGC...AATAGGGAGGCAATTGAAGACCCACTTAGAATCACCAAGAAGAAAACTTGTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR GCA 90 bp | ACTGCCATGAATCTGGGGCAACTTGGATTACACAGTGAGACCCTTTCTTTAAAATTCTCATCCAGCTTCTaGATCCACTGCTCGAATATG | + |
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Preference number: 4 (lower is better) Translates to: TAMNLGQLGLHSETLSLKFSSSF*IHCSNM Trigger: CATATTCGAGCAGTGGATGCAGAAGCTGGATGAGAA...TTTTAAAGAAAGGGTCTCACTGTGTAATCCAAGTTGCCCCAGATTCATGGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR GCA 90 bp | GCAGTTTTACTTAGTCATTCTTTACTAGGGAGCCCCCGCTATGCAGATCAAAGGCTTGCCACTTTCCACTaGATTTATGATGTCAATCTT | + |
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Preference number: 4 (lower is better) Translates to: AVLLSHSLLGSPRYADQRLATFH*IYDVNL Trigger: AAGATTGACATCATAAATGCAGTGGAAAGTGGCAAG...CCTTTGATCTGCATAGCGGGGGCTCCCTAGTAAAGAATGACTAAGTAAAACTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR CCA 90 bp | CAAGTTTTCTTCTTGGTGATTCTAAGTGGGTCTTCAATTGCCTCCCTATTCAAAGTCATTTTCTCCCTTTaGAGACCTGAATCCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: QVFFLVILSGSSIASLFKVIFSL*RPESCF Trigger: GAAGCAGGATTCAGGTCTCCAAAGGGAGAAAATGAC...TTTGAATAGGGAGGCAATTGAAGACCCACTTAGAATCACCAAGAAGAAAACTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS GCA 90 bp | GGCAGCGTATTCCTCTATGGACAAGCCTTCAAGAAACTCCACTCCTaGCCCCACTGCATGGGCAGTCAGGTCAAGAGCAACAGCAGCATC | + |
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Preference number: 5 (lower is better) Translates to: GSVFLYGQAFKKLHS*PHCMGSQVKSNSSI Trigger: GATGCTGCTGTTGCTCTTGACCTGACTGCCCATGCAGTGGGGGCAGGAGTGGAGTTTCTTGAAGGCTTGTCCATAGAGGAATACGCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS CCA 90 bp | GTTTCGTCTTGCTTACTTTCTCCGGCCCACTCGGCATCATCTTTCTaGGTGGCTTCACAAGTCTCCAGGTCCTCATCCAGGGCAGCGTAT | + |
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Preference number: 5 (lower is better) Translates to: VSSCLLSPAHSASSF*VASQVSRSSSRAAY Trigger: ATACGCTGCCCTGGATGAGGACCTGGAGACTTGTGAAGCCACCCAGAAAGATGATGCCGAGTGGGCCGGAGAAAGTAAGCAAGACGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR CAA 90 bp | TCTCCTACACTGGGGCATCTATCCAGCCTTCAGAGGACCAAGGACTGCTCCTCCAGCGTTATCCTGTCTTaGCACAACTTTCCAACTGAG | + |
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Preference number: 5 (lower is better) Translates to: SPTLGHLSSLQRTKDCSSSVILS*HNFPTE Trigger: CTCAGTTGGAAAGTTGTGCAAAGACAGGATAACGCT...GGAGGAGCAGTCCTTGGTCCTCTGAAGGCTGGATAGATGCCCCAGTGTAGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS GCA 90 bp | CTTCGTTTCTGGGCTTGGAATTTCTCATCCAGCTTCTGCATCCACTaGTCGAATATGGCTGCGGTCATCCACGCCGTTCTGTTAGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: LRFWAWNFSSSFCIH*SNMAAVIHAVLLAS Trigger: TGAAGCTAACAGAACGGCGTGGATGACCGCAGCCATATTCGAGCAGTGGATGCAGAAGCTGGATGAGAAATTCCAAGCCCAGAAACGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS CCA 90 bp | CTGCAAACCCGGAAGACAAGCATGACGGGAAGAATGCCAACTCAATaGACTTTAGGTTTTTCACTTCCGGATGTGCGGGGCAAGAGTCAA | + |
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Preference number: 5 (lower is better) Translates to: LQTRKTSMTGRMPTQ*TLGFSLPDVRGKSQ Trigger: TTGACTCTTGCCCCGCACATCCGGAAGTGAAAAACCTAAAGTCCATTGAGTTGGCATTCTTCCCGTCATGCTTGTCTTCCGGGTTTGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS GCA 90 bp | TTGGAATTTCTCATCCAGCTTCTGCATCCACTGCTCGAATATGGCTaGGGTCATCCACGCCGTTCTGTTAGCTTCATAGTACACAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: LEFLIQLLHPLLEYG*GHPRRSVSFIVHRQ Trigger: TTGCCTGTGTACTATGAAGCTAACAGAACGGCGTGGATGACCGCAGCCATATTCGAGCAGTGGATGCAGAAGCTGGATGAGAAATTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS CCA 90 bp | GCGGGGCAAGAGTCAACAAAAATCACCACTCTTCGTTTCTGGGCTTaGAATTTCTCATCCAGCTTCTGCATCCACTGCTCGAATATGGCT | + |
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Preference number: 5 (lower is better) Translates to: AGQESTKITTLRFWA*NFSSSFCIHCSNMA Trigger: AGCCATATTCGAGCAGTGGATGCAGAAGCTGGATGAGAAATTCCAAGCCCAGAAACGAAGAGTGGTGATTTTTGTTGACTCTTGCCCCGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS CCA 90 bp | GGATGTGCGGGGCAAGAGTCAACAAAAATCACCACTCTTCGTTTCTaGGCTTGGAATTTCTCATCCAGCTTCTGCATCCACTGCTCGAAT | + |
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Preference number: 5 (lower is better) Translates to: GCAGQESTKITTLRF*AWNFSSSFCIHCSN Trigger: ATTCGAGCAGTGGATGCAGAAGCTGGATGAGAAATTCCAAGCCCAGAAACGAAGAGTGGTGATTTTTGTTGACTCTTGCCCCGCACATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR CAA 90 bp | AGTATTTTCCCACTAAACAAGCGCACACACACATGCACAGCAGAAGGACCCCTCCTGCACTTAAAATCATaGTGTCCCAGCTTCTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: SIFPLNKRTHTCTAEGPLLHLKS*CPSFWA Trigger: TGCCCAGAAGCTGGGACACAATGATTTTAAGTGCAG...GAGGGGTCCTTCTGCTGTGCATGTGTGTGTGCGCTTGTTTAGTGGGAAAATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR CAA 90 bp | AGTATTTTCCCACTAAACAAGCGCACACACACATGCACAGCAGAAGGACCCCTCCGATCCAGCCAACCATaGCTGCACTTAAAATCATTG | + |
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Preference number: 5 (lower is better) Translates to: SIFPLNKRTHTCTAEGPLRSSQP*LHLKSL Trigger: CAATGATTTTAAGTGCAGCAATGGTTGGCTGGATCG...GAGGGGTCCTTCTGCTGTGCATGTGTGTGTGCGCTTGTTTAGTGGGAAAATACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR CAA 90 bp | TGGTTCTCCTACACTGGGGCATCTATCCAGCCTTCAGAGGACCAAGGACTGCTCGAGCATGTTTCCCCTTaGAATGCAAAAGTATTTGTA | + |
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Preference number: 5 (lower is better) Translates to: WFSYTGASIQPSEDQGLLEHVSP*NAKVFV Trigger: TACAAATACTTTTGCATTCAAAGGGGAAACATGCTC...GAGCAGTCCTTGGTCCTCTGAAGGCTGGATAGATGCCCCAGTGTAGGAGAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS TCA 90 bp | GCTTTTAGACGCAACATCGGGCCATTAACTGGAACGTTTAGACACTaGGCAATCCGATACCACCTCATCAATGCTTCTTCTAGATCCGTA | + |
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Preference number: 5 (lower is better) Translates to: AFRRNIGPLTGTFRH*AIRYHLINASSRSV Trigger: TACGGATCTAGAAGAAGCATTGATGAGGTGGTATCGGATTGCTCAGTGTCTAAACGTTCCAGTTAATGGCCCGATGTTGCGTCTAAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS GCA 90 bp | GCCATATTCAGCTGCAATCTCTGCCTTTTTCTTGCCACTTTCCACTaGATTTATGATGTCAATCTTCTCCTCGATGGACAGGCTCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: AIFSCNLCLFLATFH*IYDVNLLLDGQALL Trigger: AAGAAGAGCCTGTCCATCGAGGAGAAGATTGACATCATAAATGCAGTGGAAAGTGGCAAGAAAAAGGCAGAGATTGCAGCTGAATATGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS TCA 90 bp | CAGCTGCAATCTCTGCCTTTTTCTTGCCACTTTCCACTGCATTTATaGTGTCAATCTTCTCCTCGATGGACAGGCTCTTCTTTTTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: QLQSLPFSCHFPLHL*CQSSPRWTGSSFSS Trigger: TGAAGAAAAAGAAGAGCCTGTCCATCGAGGAGAAGATTGACATCATAAATGCAGTGGAAAGTGGCAAGAAAAAGGCAGAGATTGCAGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS-3UTR CAA 90 bp | CAAGTTTTCTTCTTGGTGATTCTAAGTGGGTCTTCAATTGCCTCCCTATTCAAAGCTTTTAATAACACCTaGATTCATAGCTGCAAACCC | + |
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Preference number: 5 (lower is better) Translates to: QVFFLVILSGSSIASLFKAFNNT*IHSCKP Trigger: GGGTTTGCAGCTATGAATCAAGGTGTTATTAAAAGC...TTTGAATAGGGAGGCAATTGAAGACCCACTTAGAATCACCAAGAAGAAAACTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS CAA 72 bp | CTTTTCAGAGTGCCTACAGCTGAGAGCGCGTCCTTCTaGGATGGTGACGGCAGATCCACTTCTAGCGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: LFRVPTAESASF*DGDGRSTSSAP Trigger: CGGGGCGCTAGAAGTGGATCTGCCGTCACCATCCAAGAAGGACGCGCTCTCAGCTGTAGGCACTCTGAAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS CCA 72 bp | TCTCCAGGTCCTCATCCAGGGCAGCGTATTCCTCTATaGACAAGCCTTCAAGAAACTCCACTCCTGCCCCCA | + |
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Preference number: 6 (lower is better) Translates to: SPGPHPGQRIPL*TSLQETPLLPP Trigger: TGGGGGCAGGAGTGGAGTTTCTTGAAGGCTTGTCCATAGAGGAATACGCTGCCCTGGATGAGGACCTGGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS GCA 72 bp | TTCCTCTATGGACAAGCCTTCAAGAAACTCCACTCCTaGCCCCACTGCATGGGCAGTCAGGTCAAGAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: FLYGQAFKKLHS*PHCMGSQVKSN Trigger: GTTGCTCTTGACCTGACTGCCCATGCAGTGGGGGCAGGAGTGGAGTTTCTTGAAGGCTTGTCCATAGAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS CAA 90 bp | GCTGTCCTCCTCCTCTTCATCGGAAGTATAAAGACCAGTTTCGTCTaGCTTACTTTCTCCGGCCCACTCGGCATCATCTTTCTGGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: AVLLLFIGSIKTSFV*LTFSGPLGIIFLGG Trigger: GCCACCCAGAAAGATGATGCCGAGTGGGCCGGAGAAAGTAAGCAAGACGAAACTGGTCTTTATACTTCCGATGAAGAGGAGGAGGACAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS GCA 72 bp | CTCATCCAGCTTCTGCATCCACTGCTCGAATATGGCTaGGGTCATCCACGCCGTTCTGTTAGCTTCATAGTA | + |
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Preference number: 6 (lower is better) Translates to: LIQLLHPLLEYG*GHPRRSVSFIV Trigger: TACTATGAAGCTAACAGAACGGCGTGGATGACCGCAGCCATATTCGAGCAGTGGATGCAGAAGCTGGATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS GCA 72 bp | CTTCGTTTCTGGGCTTGGAATTTCTCATCCAGCTTCTaGATCCACTGCTCGAATATGGCTGCGGTCATCCAC | + |
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Preference number: 6 (lower is better) Translates to: LRFWAWNFSSSF*IHCSNMAAVIH Trigger: GTGGATGACCGCAGCCATATTCGAGCAGTGGATGCAGAAGCTGGATGAGAAATTCCAAGCCCAGAAACGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS CCA 72 bp | CGGAAGACAAGCATGACGGGAAGAATGCCAACTCAATaGACTTTAGGTTTTTCACTTCCGGATGTGCGGGGC | + |
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Preference number: 6 (lower is better) Translates to: RKTSMTGRMPTQ*TLGFSLPDVRG Trigger: GCCCCGCACATCCGGAAGTGAAAAACCTAAAGTCCATTGAGTTGGCATTCTTCCCGTCATGCTTGTCTTCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS CAA 90 bp | TGCGGGGCAAGAGTCAACAAAAATCACCACTCTTCGTTTCTGGGCTaGGAATTTCTCATCCAGCTTCTGCATCCACTGCTCGAATATGGC | + |
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Preference number: 6 (lower is better) Translates to: CGARVNKNHHSSFLG*EFLIQLLHPLLEYG Trigger: GCCATATTCGAGCAGTGGATGCAGAAGCTGGATGAGAAATTCCAAGCCCAGAAACGAAGAGTGGTGATTTTTGTTGACTCTTGCCCCGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS GCA 72 bp | AGGGAGCTTCTCAGAGCCATCCATATTTGTTCCGAGTaGCAGCGTTATCCTGTCTTTGCACAACTTTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: RELLRAIHICSE*QRYPVFAQLSN Trigger: GTTGGAAAGTTGTGCAAAGACAGGATAACGCTGGCACTCGGAACAAATATGGATGGCTCTGAGAAGCTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS TCA 72 bp | CGCAACATCGGGCCATTAACTGGAACGTTTAGACACTaGGCAATCCGATACCACCTCATCAATGCTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: RNIGPLTGTFRH*AIRYHLINASS Trigger: AGAAGAAGCATTGATGAGGTGGTATCGGATTGCTCAGTGTCTAAACGTTCCAGTTAATGGCCCGATGTTGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS CAA 72 bp | CTCCTCTTCATCGGAAGTATAAAGACCAGTTTCGTCTaGCTTACTTTCTCCGGCCCACTCGGCATCATCTTT | + |
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Preference number: 6 (lower is better) Translates to: LLFIGSIKTSFV*LTFSGPLGIIF Trigger: AAAGATGATGCCGAGTGGGCCGGAGAAAGTAAGCAAGACGAAACTGGTCTTTATACTTCCGATGAAGAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS CAA 72 bp | AAGCCATACCTGGACTTAAAACGATCCAGCCAACCATaGCTGCACTTAAAATCATTGTGTCCCAGCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: KPYLDLKRSSQP*LHLKSLCPSFW Trigger: CCAGAAGCTGGGACACAATGATTTTAAGTGCAGCAATGGTTGGCTGGATCGTTTTAAGTCCAGGTATGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS CAA 72 bp | TCCATATTTGTTCCGAGTGCCAGCGTTATCCTGTCTTaGCACAACTTTCCAACTGAGCATGTTTCCCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: SIFVPSASVILS*HNFPTEHVSPL Trigger: CAAAGGGGAAACATGCTCAGTTGGAAAGTTGTGCAAAGACAGGATAACGCTGGCACTCGGAACAAATATGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS CAA 90 bp | TCAGAGCCATCCATATTTGTTCCGAGTGCCAGCGTTATCCTGTCTTaGCACAACTTTCCAACTGAGCATGTTTCCCCTTTGAATGCAAAA | + |
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Preference number: 6 (lower is better) Translates to: SEPSIFVPSASVILS*HNFPTEHVSPLNAK Trigger: TTTTGCATTCAAAGGGGAAACATGCTCAGTTGGAAAGTTGTGCAAAGACAGGATAACGCTGGCACTCGGAACAAATATGGATGGCTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS CAA 72 bp | AAACGATCCAGCCAACCATTGCTGCACTTAAAATCATaGTGTCCCAGCTTCTGGGCAAAATCATTAGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: KRSSQPLLHLKS*CPSFWAKSLAF Trigger: AAAAGCTAATGATTTTGCCCAGAAGCTGGGACACAATGATTTTAAGTGCAGCAATGGTTGGCTGGATCGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS GCA 72 bp | ACAATAGTCTCTGGAGTTACAGCTCTCCAGCAGAGATaGAATGTATCAACTGCATCTAGAAGAGAAAATGTA | + |
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Preference number: 6 (lower is better) Translates to: TIVSGVTALQQR*NVSTASRRENV Trigger: TACATTTTCTCTTCTAGATGCAGTTGATACATTGCATCTCTGCTGGAGAGCTGTAACTCCAGAGACTATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS CAA 90 bp | GAATTTTTCTTTATGCCATATTCAGCTGCAATCTCTGCCTTTTTCTaGCCACTTTCCACTGCATTTATGATGTCAATCTTCTCCTCGATG | + |
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Preference number: 6 (lower is better) Translates to: EFFFMPYSAAISAFF*PLSTAFMMSIFSSM Trigger: CATCGAGGAGAAGATTGACATCATAAATGCAGTGGAAAGTGGCAAGAAAAAGGCAGAGATTGCAGCTGAATATGGCATAAAGAAAAATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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| CDS CAA 72 bp | TTTATGCCATATTCAGCTGCAATCTCTGCCTTTTTCTaGCCACTTTCCACTGCATTTATGATGTCAATCTTC | + |
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Preference number: 6 (lower is better) Translates to: FMPYSAAISAFF*PLSTAFMMSIF Trigger: GAAGATTGACATCATAAATGCAGTGGAAAGTGGCAAGAAAAAGGCAGAGATTGCAGCTGAATATGGCATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062623.4 |
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