Pregenerated sensors for TIGD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049232Ensembl transcript IDs: ENSMUST00000062626.4
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | TTTGAGCAAGATTTATTGAGAGCCTACAGTGTGCATTaGCCATCACTAGACATGTTGAAATTCAGTACACAA | + |
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Preference number: 3 (lower is better) Translates to: FEQDLLRAYSVH*PSLDMLKFSTQ Trigger: TTGTGTACTGAATTTCAACATGTCTAGTGATGGGCAATGCACACTGTAGGCTCTCAATAAATCTTGCTCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| 3UTR-3UTR CAA 90 bp | TCACTAGACATGTTGAAATTCAGTACACAACATATCTCAGCCTCCAGTATACTAATGAATTCCATGTCATaGCTCAATCAGAGCCAACAT | + |
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Preference number: 3 (lower is better) Translates to: SLDMLKFSTQHISASSILMNSMS*LNQSQH Trigger: ATGTTGGCTCTGATTGAGCAATGACATGGAATTCAT...TAGTATACTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCTAGTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR CCA 90 bp | CAAGATTTATTGAGAGCCTACAGTGTGCATTGCCCATCACTAGACATGTTGAAATTTCCCTGCAGCCTTTaGAATACCGTGGCGCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: QDLLRAYSVHCPSLDMLKFPCSL*NTVALL Trigger: AAGCAGCGCCACGGTATTCCAAAGGCTGCAGGGAAA...TTTCAACATGTCTAGTGATGGGCAATGCACACTGTAGGCTCTCAATAAATCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR TCA 90 bp | TTGCCCATCACTAGACATGTTGAAATTCAGTACACAACATATCTCAGCCTCCAGATGTCAGCTAACACCTaGCAGTTTGAGCCACTACTC | + |
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Preference number: 4 (lower is better) Translates to: LPITRHVEIQYTTYLSLQMSANT*QFEPLL Trigger: GAGTAGTGGCTCAAACTGTCAGGTGTTAGCTGACAT...CTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCTAGTGATGGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR GCA 90 bp | TTGCCCATCACTAGACATGTTGAAATTCAGTACACAACATATCTCAGCCTCCAGTTTTGTGCCTTTCCCTaGAGCCTTTGGAATACCGTG | + |
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Preference number: 4 (lower is better) Translates to: LPITRHVEIQYTTYLSLQFCAFP*SLWNTV Trigger: CACGGTATTCCAAAGGCTGCAGGGAAAGGCACAAAA...CTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCTAGTGATGGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| 3UTR CAA 72 bp | AGAGCCTACAGTGTGCATTGCCCATCACTAGACATGTaGAAATTCAGTACACAACATATCTCAGCCTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: RAYSVHCPSLDM*KFSTQHISASS Trigger: ACTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCTAGTGATGGGCAATGCACACTGTAGGCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR TCA 90 bp | TTGCCCATCACTAGACATGTTGAAATTCAGTACACAACATATCTCAGCCTCCAGGAGATTAAGCTTGTGTaGACCTGTGGCATTTGCACA | + |
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Preference number: 4 (lower is better) Translates to: LPITRHVEIQYTTYLSLQEIKLV*TCGICT Trigger: TGTGCAAATGCCACAGGTTCACACAAGCTTAATCTC...CTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCTAGTGATGGGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR TCA 90 bp | CAAGATTTATTGAGAGCCTACAGTGTGCATTGCCCATCACTAGACATGTTGAAATATTCTGCCATCATCTaGGCTCAGCAGTTCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QDLLRAYSVHCPSLDMLKYSAII*AQQFFS Trigger: GCTGAAGAACTGCTGAGCTCAGATGATGGCAGAATA...TTTCAACATGTCTAGTGATGGGCAATGCACACTGTAGGCTCTCAATAAATCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR GCA 90 bp | TTGCCCATCACTAGACATGTTGAAATTCAGTACACAACATATCTCAGCCTCCAGAAGAAGAACCTAGCCTaGTTTGCACAGATCGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: LPITRHVEIQYTTYLSLQKKNLA*FAQIVP Trigger: TGGAACGATCTGTGCAAAGCAGGCTAGGTTCTTCTT...CTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCTAGTGATGGGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR TCA 90 bp | TTGCCCATCACTAGACATGTTGAAATTCAGTACACAACATATCTCAGCCTCCAGCTCGGTAATATCTTTTaGCTGTGGTTAGAACTCCCT | + |
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Preference number: 4 (lower is better) Translates to: LPITRHVEIQYTTYLSLQLGNIF*LWLELP Trigger: AGGGAGTTCTAACCACAGTCAAAAGATATTACCGAG...CTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCTAGTGATGGGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR TCA 90 bp | TCACTAGACATGTTGAAATTCAGTACACAACATATCTCAGCCTCCAGTATACTACTGGTTCCAGGCTCTTaGTGCCTCATAAATTGCATC | + |
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Preference number: 4 (lower is better) Translates to: SLDMLKFSTQHISASSILLVPGS*CLINCI Trigger: GATGCAATTTATGAGGCATCAAGAGCCTGGAACCAG...TAGTATACTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCTAGTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR GCA 90 bp | TCACTAGACATGTTGAAATTCAGTACACAACATATCTCAGCCTCCAGTATACTAGATTTCAGATGCTTCTaGACCTGTGGCACAAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: SLDMLKFSTQHISASSILDFRCF*TCGTKH Trigger: GTGCTTTGTGCCACAGGTGCAGAAGCATCTGAAATC...TAGTATACTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCTAGTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR CCA 90 bp | TCACTAGACATGTTGAAATTCAGTACACAACATATCTCAGCCTCCAGTATACTAACGTTGACGACTTCATaGATTTACGCTTGGACACCC | + |
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Preference number: 4 (lower is better) Translates to: SLDMLKFSTQHISASSILTLTTS*IYAWTP Trigger: GGGTGTCCAAGCGTAAATCCATGAAGTCGTCAACGT...TAGTATACTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCTAGTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR CCA 90 bp | TCACTAGACATGTTGAAATTCAGTACACAACATATCTCAGCCTCCAGTATACTAGCCTTTGGAATACCGTaGCGCTGCTTAAACCTAGTA | + |
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Preference number: 4 (lower is better) Translates to: SLDMLKFSTQHISASSILAFGIP*RCLNLV Trigger: TACTAGGTTTAAGCAGCGCCACGGTATTCCAAAGGC...TAGTATACTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCTAGTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR CCA 90 bp | CAAGATTTATTGAGAGCCTACAGTGTGCATTGCCCATCACTAGACATGTTGAAATACCACAAAATTCACTaGCAGCAGTTTCATCCCCTT | + |
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Preference number: 4 (lower is better) Translates to: QDLLRAYSVHCPSLDMLKYHKIH*QQFHPL Trigger: AAGGGGATGAAACTGCTGCCAGTGAATTTTGTGGTA...TTTCAACATGTCTAGTGATGGGCAATGCACACTGTAGGCTCTCAATAAATCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR TCA 90 bp | AGACATGTTGAAATTCAGTACACAACATATCTCAGCCTCCAGTATACTATGATCTTTCAAACCACTGTTTaGGAACAGATGGCTCGATCC | + |
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Preference number: 4 (lower is better) Translates to: RHVEIQYTTYLSLQYTMIFQTTV*EQMARS Trigger: GGATCGAGCCATCTGTTCTCAAACAGTGGTTTGAAA...GATCATAGTATACTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR TCA 90 bp | AGACATGTTGAAATTCAGTACACAACATATCTCAGCCTCCAGTATACTATGATCTCTGGTTATGGTGTTTaGTCTTATCTGGTTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: RHVEIQYTTYLSLQYTMISGYGV*SYLVPG Trigger: GCCTGGAACCAGATAAGATCAAACACCATAACCAGA...GATCATAGTATACTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR TCA 90 bp | CATGTCATTGCTCAATCAGAGCCAACATTAAAGAGGTGTAATTTAAGTAATCCACCCACTAGTTGGGTCTaGACTGTTGGCATAGTTTAT | + |
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Preference number: 4 (lower is better) Translates to: HVIAQSEPTLKRCNLSNPPTSWV*TVGIVY Trigger: ATAAACTATGCCAACAGTTCAGACCCAACTAGTGGG...TGGATTACTTAAATTACACCTCTTTAATGTTGGCTCTGATTGAGCAATGACATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR CCA 90 bp | AGACATGTTGAAATTCAGTACACAACATATCTCAGCCTCCAGTATACTATGATCTTTCTCGAAGCCCTTTaGATTTCAGATGCTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: RHVEIQYTTYLSLQYTMIFLEAL*ISDASA Trigger: TGCAGAAGCATCTGAAATCCAAAGGGCTTCGAGAAA...GATCATAGTATACTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR CCA 90 bp | AGACATGTTGAAATTCAGTACACAACATATCTCAGCCTCCAGTATACTATGATCTCCACGCTCTGGTTATaGTGTTTGATCTTATCTGGT | + |
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Preference number: 4 (lower is better) Translates to: RHVEIQYTTYLSLQYTMISTLWL*CLILSG Trigger: ACCAGATAAGATCAAACACCATAACCAGAGCGTGGA...GATCATAGTATACTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR TCA 90 bp | CATGTCATTGCTCAATCAGAGCCAACATTAAAGAGGTGTAATTTAAGTAATCCATCAAGTGCAGCTTTATaGCTAATATGCTTCTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: HVIAQSEPTLKRCNLSNPSSAAL*LICFSG Trigger: TCCAGAGAAGCATATTAGTCATAAAGCTGCACTTGA...TGGATTACTTAAATTACACCTCTTTAATGTTGGCTCTGATTGAGCAATGACATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR GCA 90 bp | CATGTCATTGCTCAATCAGAGCCAACATTAAAGAGGTGTAATTTAAGTAATCCACTCTGGATTCAGTTCTaGTTTCCTAGTTTTCCTAGA | + |
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Preference number: 4 (lower is better) Translates to: HVIAQSEPTLKRCNLSNPLWIQF*FPSFPR Trigger: TCTAGGAAAACTAGGAAAGCAGAACTGAATCCAGAG...TGGATTACTTAAATTACACCTCTTTAATGTTGGCTCTGATTGAGCAATGACATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR GCA 90 bp | CATGTCATTGCTCAATCAGAGCCAACATTAAAGAGGTGTAATTTAAGTAATCCAATTTCACAATTATTCTaGCATCATCTGAGCTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: HVIAQSEPTLKRCNLSNPISQLF*HHLSSA Trigger: TGCTGAGCTCAGATGATGGCAGAATAATTGTGAAAT...TGGATTACTTAAATTACACCTCTTTAATGTTGGCTCTGATTGAGCAATGACATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR GCA 90 bp | AGACATGTTGAAATTCAGTACACAACATATCTCAGCCTCCAGTATACTATGATCCGAGAGTCAAACCACTaGTCAATATTTTCAATGTTA | + |
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Preference number: 4 (lower is better) Translates to: RHVEIQYTTYLSLQYTMIRESNH*SIFSML Trigger: TAACATTGAAAATATTGAGCAGTGGTTTGACTCTCG...GATCATAGTATACTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR GCA 90 bp | AGACATGTTGAAATTCAGTACACAACATATCTCAGCCTCCAGTATACTATGATCTTCAGTCCATTCAAGTaGAGCTTTATGACTAATATG | + |
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Preference number: 4 (lower is better) Translates to: RHVEIQYTTYLSLQYTMIFSPFK*SFMTNM Trigger: CATATTAGTCATAAAGCTGCACTTGAATGGACTGAA...GATCATAGTATACTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS TCA 90 bp | GTGACCTTCGCCCGGTCTGCAGCACCTACAATGTCAGCTAACACCTaGCAGTTTGAGCCACTACTCCGAGAGTCAAACCACTGCTCAATA | + |
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Preference number: 5 (lower is better) Translates to: VTFARSAAPTMSANT*QFEPLLRESNHCSI Trigger: TATTGAGCAGTGGTTTGACTCTCGGAGTAGTGGCTCAAACTGTCAGGTGTTAGCTGACATTGTAGGTGCTGCAGACCGGGCGAAGGTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS GCA 90 bp | TTTAATTTTGTGCCTTTCCCTGCAGCCTTTGGAATACCGTGGCGCTaGTTAAACCTAGTAAGCCAGCCAGAAGAGGCATTAAAATCACCC | + |
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Preference number: 5 (lower is better) Translates to: FNFVPFPAAFGIPWR*LNLVSQPEEALKSP Trigger: GGGTGATTTTAATGCCTCTTCTGGCTGGCTTACTAGGTTTAAGCAGCGCCACGGTATTCCAAAGGCTGCAGGGAAAGGCACAAAATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR CAA 90 bp | TTGCCCATCACTAGACATGTTGAAATTCAGTACACAACATATCTCAGCCTCCAGCATCCCCTTTTAATTTaGTGCCTTTCCCTGCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: LPITRHVEIQYTTYLSLQHPLLI*CLSLQP Trigger: AGGCTGCAGGGAAAGGCACAAAATTAAAAGGGGATG...CTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCTAGTGATGGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS GCA 90 bp | AGTAGTACTGCTTTTTCTCGAAGCCCTTTGGATTTCAGATGCTTCTaGACCTGTGGCACAAAGCACTTTTCAAACCACTGTTTGAGAACA | + |
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Preference number: 5 (lower is better) Translates to: SSTAFSRSPLDFRCF*TCGTKHFSNHCLRT Trigger: TGTTCTCAAACAGTGGTTTGAAAAGTGCTTTGTGCCACAGGTGCAGAAGCATCTGAAATCCAAAGGGCTTCGAGAAAAAGCAGTACTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS CCA 90 bp | ATCGAAGAAGAACCTAGCCTGCTTTGCACAGATCGTTCCAGACACTaGAATGCCATCTGTTTTCTGTTGATTAAACCATTCTATCATCAC | + |
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Preference number: 5 (lower is better) Translates to: IEEEPSLLCTDRSRH*NAICFLLIKPFYHH Trigger: GTGATGATAGAATGGTTTAATCAACAGAAAACAGATGGCATTCCAGTGTCTGGAACGATCTGTGCAAAGCAGGCTAGGTTCTTCTTCGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR CAA 90 bp | TTGCCCATCACTAGACATGTTGAAATTCAGTACACAACATATCTCAGCCTCCAGTTTTCAAACCACTGTTaGAGAACAGATGGCTCGATC | + |
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Preference number: 5 (lower is better) Translates to: LPITRHVEIQYTTYLSLQFSNHC*RTDGSI Trigger: GATCGAGCCATCTGTTCTCAAACAGTGGTTTGAAAA...CTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCTAGTGATGGGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS CCA 90 bp | ATAATAATGATTCTTTCTCTGCTTGTCCTATATTCACAAGTACTCTaGTCCGTGTCAAAAGCCAATGTCCTCGTTGGTAGACATTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: IIMILSLLVLYSQVL*SVSKANVLVGRHFQ Trigger: CTGGAAATGTCTACCAACGAGGACATTGGCTTTTGACACGGACCAGAGTACTTGTGAATATAGGACAAGCAGAGAAAGAATCATTATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR CAA 90 bp | AGACATGTTGAAATTCAGTACACAACATATCTCAGCCTCCAGTATACTATGATCAAGCCAATGTCCTCGTaGGTAGACATTTCCAGAACA | + |
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Preference number: 5 (lower is better) Translates to: RHVEIQYTTYLSLQYTMIKPMSS*VDISRT Trigger: TGTTCTGGAAATGTCTACCAACGAGGACATTGGCTT...GATCATAGTATACTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR CAA 90 bp | AGACATGTTGAAATTCAGTACACAACATATCTCAGCCTCCAGTATACTATGATCGAAAGGTCAGTACCTTaGAATGCACGGGGTCTTTTT | + |
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Preference number: 5 (lower is better) Translates to: RHVEIQYTTYLSLQYTMIERSVP*NARGLF Trigger: AAAAAGACCCCGTGCATTCAAAGGTACTGACCTTTC...GATCATAGTATACTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR CAA 90 bp | AGACATGTTGAAATTCAGTACACAACATATCTCAGCCTCCAGTATACTATGATCTCTGGTTCCAGGCTCTaGATGCCTCATAAATTGCAT | + |
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Preference number: 5 (lower is better) Translates to: RHVEIQYTTYLSLQYTMISGSRL*MPHKLH Trigger: ATGCAATTTATGAGGCATCAAGAGCCTGGAACCAGA...GATCATAGTATACTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR CAA 90 bp | TCACTAGACATGTTGAAATTCAGTACACAACATATCTCAGCCTCCAGTATACTAACACAGAGATTAAGCTaGTGTGAACCTGTGGCATTT | + |
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Preference number: 5 (lower is better) Translates to: SLDMLKFSTQHISASSILTQRLS*CEPVAF Trigger: AAATGCCACAGGTTCACACAAGCTTAATCTCTGTGT...TAGTATACTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCTAGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR CAA 90 bp | TCACTAGACATGTTGAAATTCAGTACACAACATATCTCAGCCTCCAGTATACTAAGGACAGAAAGTTTTTaGAAGGAGTTGCCTTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: SLDMLKFSTQHISASSILRTESF*KELPSS Trigger: TGAAGAAGGCAACTCCTTCAAAAAACTTTCTGTCCT...TAGTATACTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCTAGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS-3UTR CAA 90 bp | AGACATGTTGAAATTCAGTACACAACATATCTCAGCCTCCAGTATACTATGATCTTGATGCCTCATAAATaGCATCCAACACAGTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: RHVEIQYTTYLSLQYTMILMPHK*HPTQSN Trigger: ATTTGACTGTGTTGGATGCAATTTATGAGGCATCAA...GATCATAGTATACTGGAGGCTGAGATATGTTGTGTACTGAATTTCAACATGTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS TCA 72 bp | GCCCGGTCTGCAGCACCTACAATGTCAGCTAACACCTaGCAGTTTGAGCCACTACTCCGAGAGTCAAACCAC | + |
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Preference number: 6 (lower is better) Translates to: ARSAAPTMSANT*QFEPLLRESNH Trigger: GTGGTTTGACTCTCGGAGTAGTGGCTCAAACTGTCAGGTGTTAGCTGACATTGTAGGTGCTGCAGACCGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS GCA 72 bp | CCCTCCATGCCCAATGCATCGAAGAAGAACCTAGCCTaGTTTGCACAGATCGTTCCAGACACTGGAATGCCA | + |
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Preference number: 6 (lower is better) Translates to: PSMPNASKKNLA*FAQIVPDTGMP Trigger: TGGCATTCCAGTGTCTGGAACGATCTGTGCAAAGCAGGCTAGGTTCTTCTTCGATGCATTGGGCATGGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS GCA 72 bp | CATGCCCAATGCATCGAAGAAGAACCTAGCCTGCTTTaGACAGATCGTTCCAGACACTGGAATGCCATCTGT | + |
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Preference number: 6 (lower is better) Translates to: HAQCIEEEPSLL*TDRSRHWNAIC Trigger: ACAGATGGCATTCCAGTGTCTGGAACGATCTGTGCAAAGCAGGCTAGGTTCTTCTTCGATGCATTGGGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS CAA 72 bp | AGCTCCTCATACGTTGACGACTTCATGGATTTACGCTaGGACACCCCACTAGTTGGGTCTGAACTGTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SSSYVDDFMDLR*DTPLVGSELLA Trigger: TGCCAACAGTTCAGACCCAACTAGTGGGGTGTCCAAGCGTAAATCCATGAAGTCGTCAACGTATGAGGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS CAA 72 bp | CTGCAGCACCTACAATGTCAGCTAACACCTGACAGTTaGAGCCACTACTCCGAGAGTCAAACCACTGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: LQHLQCQLTPDS*SHYSESQTTAQ Trigger: TTGAGCAGTGGTTTGACTCTCGGAGTAGTGGCTCAAACTGTCAGGTGTTAGCTGACATTGTAGGTGCTGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS CAA 90 bp | TCGCCCGGTCTGCAGCACCTACAATGTCAGCTAACACCTGACAGTTaGAGCCACTACTCCGAGAGTCAAACCACTGCTCAATATTTTCAA | + |
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Preference number: 6 (lower is better) Translates to: SPGLQHLQCQLTPDS*SHYSESQTTAQYFQ Trigger: TTGAAAATATTGAGCAGTGGTTTGACTCTCGGAGTAGTGGCTCAAACTGTCAGGTGTTAGCTGACATTGTAGGTGCTGCAGACCGGGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS GCA 72 bp | GCTTTTTCTCGAAGCCCTTTGGATTTCAGATGCTTCTaGACCTGTGGCACAAAGCACTTTTCAAACCACTGT | + |
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Preference number: 6 (lower is better) Translates to: AFSRSPLDFRCF*TCGTKHFSNHC Trigger: ACAGTGGTTTGAAAAGTGCTTTGTGCCACAGGTGCAGAAGCATCTGAAATCCAAAGGGCTTCGAGAAAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS GCA 72 bp | AGTACTGCTTTTTCTCGAAGCCCTTTGGATTTCAGATaGTTCTGCACCTGTGGCACAAAGCACTTTTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: STAFSRSPLDFR*FCTCGTKHFSN Trigger: GTTTGAAAAGTGCTTTGTGCCACAGGTGCAGAAGCATCTGAAATCCAAAGGGCTTCGAGAAAAAGCAGTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS CAA 72 bp | AAATCCAAAAGTAGTACTGCTTTTTCTCGAAGCCCTTaGGATTTCAGATGCTTCTGCACCTGTGGCACAAAG | + |
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Preference number: 6 (lower is better) Translates to: KSKSSTAFSRSP*DFRCFCTCGTK Trigger: CTTTGTGCCACAGGTGCAGAAGCATCTGAAATCCAAAGGGCTTCGAGAAAAAGCAGTACTACTTTTGGATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS CAA 72 bp | TGGTTATGGTGTTTGATCTTATCTGGTTCCAGGCTCTaGATGCCTCATAAATTGCATCCAACACAGTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: WLWCLILSGSRL*MPHKLHPTQSN Trigger: ATTTGACTGTGTTGGATGCAATTTATGAGGCATCAAGAGCCTGGAACCAGATAAGATCAAACACCATAACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS CAA 90 bp | TGGTGTTTGATCTTATCTGGTTCCAGGCTCTTGATGCCTCATAAATaGCATCCAACACAGTCAAATTCTTCCAAAATGTTTTTGGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: WCLILSGSRLLMPHK*HPTQSNSSKMFLGH Trigger: ATGACCCAAAAACATTTTGGAAGAATTTGACTGTGTTGGATGCAATTTATGAGGCATCAAGAGCCTGGAACCAGATAAGATCAAACACCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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| CDS CAA 72 bp | GAGTTGCCTTCTTCAAGCTTCTTAATAATGTCAAGTTaGTCTTTAATTGTCAGGACCACACGTTTACGTTTC | + |
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Preference number: 6 (lower is better) Translates to: ELPSSSFLIMSS*SLIVRTTRLRF Trigger: GAAACGTAAACGTGTGGTCCTGACAATTAAAGACAAACTTGACATTATTAAGAAGCTTGAAGAAGGCAACTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062626.4 |
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