Pregenerated sensors for TIFAB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049625Ensembl transcript IDs: ENSMUST00000169652.3, ENSMUST00000225063.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGGTTTCCCGCCCCCAAAGCCACATGACAACATGGTATACATGTaGCCCATCTGGGCCTCAGGGGATCCTACTGGGCATGCCAGCATA | + |
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Preference number: 1 (lower is better) Translates to: PGFPPPKPHDNMVYM*PIWASGDPTGHASI Trigger: TATGCTGGCATGCCCAGTAGGATCCCCTGAGGCCCAGATGGGCCACATGTATACCATGTTGTCATGTGGCTTTGGGGGCGGGAAACCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR CCA 90 bp | CCGCCCCCAAAGCCACATGACAACATGGTATACATGTGGCCCATCTaGGCCTCAGGGGATCCTACTGGGCATGCCAGCATAATGAAATAC | + |
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Preference number: 1 (lower is better) Translates to: PPPKPHDNMVYMWPI*ASGDPTGHASIMKY Trigger: GTATTTCATTATGCTGGCATGCCCAGTAGGATCCCCTGAGGCCCAGATGGGCCACATGTATACCATGTTGTCATGTGGCTTTGGGGGCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR GCA 90 bp | TCCCATTACACAGAGCTACGGAGGGCATTTCTCCACCCCATGGGCTaGTCAAAGTTTACAGAATCAGTTCCCTGTGAACATGGCGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: SHYTELRRAFLHPMG*SKFTESVPCEHGGQ Trigger: CTGGCCGCCATGTTCACAGGGAACTGATTCTGTAAACTTTGAGCAGCCCATGGGGTGGAGAAATGCCCTCCGTAGCTCTGTGTAATGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR TCA 90 bp | ACACAGGCTTTCCTAAGCCCTGAGCGCCTGTGGGTATTTGAAAACTaGAGGGAACCCGGAGCTACCTCAAACGTAATTTCTCCCTGTGTC | + |
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Preference number: 1 (lower is better) Translates to: TQAFLSPERLWVFEN*REPGATSNVISPCV Trigger: GACACAGGGAGAAATTACGTTTGAGGTAGCTCCGGGTTCCCTTCAGTTTTCAAATACCCACAGGCGCTCAGGGCTTAGGAAAGCCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR CCA 90 bp | GAAGTTCCCATTACACAGAGCTACGGAGGGCATTTCTCCACCCCATaGGCTGCTCAAAGTTTACAGAATCAGTTCCCTGTGAACATGGCG | + |
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Preference number: 1 (lower is better) Translates to: EVPITQSYGGHFSTP*AAQSLQNQFPVNMA Trigger: CGCCATGTTCACAGGGAACTGATTCTGTAAACTTTGAGCAGCCCATGGGGTGGAGAAATGCCCTCCGTAGCTCTGTGTAATGGGAACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR GCA 90 bp | AATTTCTCCCTGTGTCCTTGCATTCCTGTTTCAACCCCATGTTCCTaGCCTTCGGCAGAAGAACATAAAGTAACTCCTCGCCAGACAATG | + |
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Preference number: 1 (lower is better) Translates to: NFSLCPCIPVSTPCS*PSAEEHKVTPRQTM Trigger: CATTGTCTGGCGAGGAGTTACTTTATGTTCTTCTGCCGAAGGGCAGGAACATGGGGTTGAAACAGGAATGCAAGGACACAGGGAGAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR CCA 90 bp | CGAAAGCCCTTGAGCTCTGGAGCCAGATCACTGGGGTTCAAGTCGCCCCAAGATGACTGGGAGGGGCTGTaGAGAGACCTCGAGAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: RKPLSSGARSLGFKSPQDDWEGL*RDLESS Trigger: TGAACTCTCGAGGTCTCTCCACAGCCCCTCCCAGTC...ATCTTGGGGCGACTTGAACCCCAGTGATCTGGCTCCAGAGCTCAAGGGCTTTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169652.3 |
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| 3UTR-3UTR TCA 90 bp | AGTGGTGTTCCAGGTGTTGAGGATATGGATCAGTCTGCTGGCAGCACTGTCCCCAGAATCAGTTCCCTGTaGACATGGCGGCCAGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: SGVPGVEDMDQSAGSTVPRISSL*TWRPAG Trigger: GCCTGCTGGCCGCCATGTTCACAGGGAACTGATTCT...GGGGACAGTGCTGCCAGCAGACTGATCCATATCCTCAACACCTGGAACACCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGGTGTTCCAGGTGTTGAGGATATGGATCAGTCTGCTGGCAGCACTGTCCCCGACTGGGAGGGGCTGTaGAGAGACCTCGAGAGTTCA | + |
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Preference number: 2 (lower is better) Translates to: SGVPGVEDMDQSAGSTVPDWEGL*RDLESS Trigger: TGAACTCTCGAGGTCTCTCCACAGCCCCTCCCAGTC...GGGGACAGTGCTGCCAGCAGACTGATCCATATCCTCAACACCTGGAACACCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGGTGTTCCAGGTGTTGAGGATATGGATCAGTCTGCTGGCAGCACTGTCCCCTGCTTCTTCCGGGCTTaGCAGGGAAGCAGCTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: SGVPGVEDMDQSAGSTVPCFFRA*QGSSCL Trigger: CAGACAGCTGCTTCCCTGCCAAGCCCGGAAGAAGCA...GGGGACAGTGCTGCCAGCAGACTGATCCATATCCTCAACACCTGGAACACCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR CAA 90 bp | AGTGGGGTGCATTGTCTGAGGGCCCCTTCTGCAACTTTGTTTCTATaGCTTCTTCCGGGCTTGGCAGGGAAGCAGCTGTCTGAGACTGGG | + |
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Preference number: 2 (lower is better) Translates to: SGVHCLRAPSATLFL*LLPGLAGKQLSETG Trigger: CCCAGTCTCAGACAGCTGCTTCCCTGCCAAGCCCGGAAGAAGCAATAGAAACAAAGTTGCAGAAGGGGCCCTCAGACAATGCACCCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR CAA 90 bp | AGCAGGGCTAGTGGGGTGCATTGTCTGAGGGCCCCTTCTGCAACTTaGTTTCTATTGCTTCTTCCGGGCTTGGCAGGGAAGCAGCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: SRASGVHCLRAPSAT*FLLLLPGLAGKQLS Trigger: AGACAGCTGCTTCCCTGCCAAGCCCGGAAGAAGCAATAGAAACAAAGTTGCAGAAGGGGCCCTCAGACAATGCACCCCACTAGCCCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR TCA 90 bp | ATGAAGTTCCCATTACACAGAGCTACGGAGGGCATTTCTCCACCCCATGGGCTGAGAATCAGTTCCCTGTaGACATGGCGGCCAGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: MKFPLHRATEGISPPHGLRISSL*TWRPAG Trigger: GCCTGCTGGCCGCCATGTTCACAGGGAACTGATTCT...CAGCCCATGGGGTGGAGAAATGCCCTCCGTAGCTCTGTGTAATGGGAACTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGAGTGCACACAGTCTGTATTCTGTAGGAGGAGGGGCTTCCCAAGCCCGCATTGGGTATTTGAAAACTaGAGGGAACCCGGAGCTACC | + |
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Preference number: 2 (lower is better) Translates to: AECTQSVFCRRRGFPSPHWVFEN*REPGAT Trigger: GGTAGCTCCGGGTTCCCTTCAGTTTTCAAATACCCA...ATGCGGGCTTGGGAAGCCCCTCCTCCTACAGAATACAGACTGTGTGCACTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR GCA 90 bp | ATGAAGTTCCCATTACACAGAGCTACGGAGGGCATTTCTCCACCCCATGGGCTGCGAGAGTTCATGAGTTaGCTCCCCCAAAACAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: MKFPLHRATEGISPPHGLREFMS*LPQNRG Trigger: CCCCCTGTTTTGGGGGAGGCAACTCATGAACTCTCG...CAGCCCATGGGGTGGAGAAATGCCCTCCGTAGCTCTGTGTAATGGGAACTTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR GCA 90 bp | AGGATATGGATCAGTCTGCTGGCAGCACTGTCCCCTGAGTGTTTGGGGTACTCTCGAGAGTTCATGAGTTaGCTCCCCCAAAACAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: RIWISLLAALSPECLGYSREFMS*LPQNRG Trigger: CCCCCTGTTTTGGGGGAGGCAACTCATGAACTCTCG...AGAGTACCCCAAACACTCAGGGGACAGTGCTGCCAGCAGACTGATCCATATCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR CCA 90 bp | AGGATATGGATCAGTCTGCTGGCAGCACTGTCCCCTGAGTGTTTGGGGTACTCTTACATGTGGCCCATCTaGGCCTCAGGGGATCCTACT | + |
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Preference number: 2 (lower is better) Translates to: RIWISLLAALSPECLGYSYMWPI*ASGDPT Trigger: AGTAGGATCCCCTGAGGCCCAGATGGGCCACATGTA...AGAGTACCCCAAACACTCAGGGGACAGTGCTGCCAGCAGACTGATCCATATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR CCA 90 bp | GGCAGTGGTGTTCCAGGTGTTGAGGATATGGATCAGTCTGCTGGCAGCACTGTCAACATGGTATACATGTaGCCCATCTGGGCCTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: GSGVPGVEDMDQSAGSTVNMVYM*PIWASG Trigger: CCCTGAGGCCCAGATGGGCCACATGTATACCATGTT...GACAGTGCTGCCAGCAGACTGATCCATATCCTCAACACCTGGAACACCACTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGGTGTTCCAGGTGTTGAGGATATGGATCAGTCTGCTGGCAGCACTGTCCCCCCCCTGCTAGCCTTCTaGTCCCTTCTGAGAAAATTC | + |
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Preference number: 2 (lower is better) Translates to: SGVPGVEDMDQSAGSTVPPLLAF*SLLRKF Trigger: GAATTTTCTCAGAAGGGAGCAGAAGGCTAGCAGGGG...GGGGACAGTGCTGCCAGCAGACTGATCCATATCCTCAACACCTGGAACACCACT 53% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR CCA 90 bp | AGGATATGGATCAGTCTGCTGGCAGCACTGTCCCCTGAGTGTTTGGGGTACTCTGGCTTCCAGAACCCCTaGGGGCCTCTAAACGTATAT | + |
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Preference number: 2 (lower is better) Translates to: RIWISLLAALSPECLGYSGFQNP*GPLNVY Trigger: ATATACGTTTAGAGGCCCCCAGGGGTTCTGGAAGCC...AGAGTACCCCAAACACTCAGGGGACAGTGCTGCCAGCAGACTGATCCATATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR CCA 90 bp | ACGTACGCCTACCTACCTTCCCAATTTCCTCTCACACCTCATCCAGGTTTCCCGAACATGGTATACATGTaGCCCATCTGGGCCTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: TYAYLPSQFPLTPHPGFPNMVYM*PIWASG Trigger: CCCTGAGGCCCAGATGGGCCACATGTATACCATGTT...CGGGAAACCTGGATGAGGTGTGAGAGGAAATTGGGAAGGTAGGTAGGCGTACGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGGTGTTCCAGGTGTTGAGGATATGGATCAGTCTGCTGGCAGCACTGTCCCCAGCAGGCTTTACATGTaGACTCTGTGTGTCAACCTC | + |
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Preference number: 2 (lower is better) Translates to: SGVPGVEDMDQSAGSTVPSRLYM*TLCVNL Trigger: GAGGTTGACACACAGAGTTCACATGTAAAGCCTGCT...GGGGACAGTGCTGCCAGCAGACTGATCCATATCCTCAACACCTGGAACACCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAGTGGTGTTCCAGGTGTTGAGGATATGGATCAGTCTGCTGGCAGCACTGTCCCTGCTCCCCCTTCTTaGTGGCATATGATTTACTCT | + |
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Preference number: 2 (lower is better) Translates to: GSGVPGVEDMDQSAGSTVPAPPS*WHMIYS Trigger: AGAGTAAATCATATGCCAGCAAGAAGGGGGAGCAGG...GACAGTGCTGCCAGCAGACTGATCCATATCCTCAACACCTGGAACACCACTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR GCA 90 bp | AGGATATGGATCAGTCTGCTGGCAGCACTGTCCCCTGAGTGTTTGGGGTACTCTCCCCTGCTAGCCTTCTaGTCCCTTCTGAGAAAATTC | + |
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Preference number: 2 (lower is better) Translates to: RIWISLLAALSPECLGYSPLLAF*SLLRKF Trigger: GAATTTTCTCAGAAGGGAGCAGAAGGCTAGCAGGGG...AGAGTACCCCAAACACTCAGGGGACAGTGCTGCCAGCAGACTGATCCATATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGAGTGCACACAGTCTGTATTCTGTAGGAGGAGGGGCTTCCCAAGCCCGCATGTGTTAGTTTCCTTATaGGGAAGACATGCTCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: AECTQSVFCRRRGFPSPHVLVSL*GRHAQL Trigger: CAGCTGAGCATGTCTTCCCCATAAGGAAACTAACAC...ATGCGGGCTTGGGAAGCCCCTCCTCCTACAGAATACAGACTGTGTGCACTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR TCA 90 bp | ATGAAGTTCCCATTACACAGAGCTACGGAGGGCATTTCTCCACCCCATGGGCTGAGCAGGCTTTACATGTaGACTCTGTGTGTCAACCTC | + |
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Preference number: 2 (lower is better) Translates to: MKFPLHRATEGISPPHGLSRLYM*TLCVNL Trigger: GAGGTTGACACACAGAGTTCACATGTAAAGCCTGCT...CAGCCCATGGGGTGGAGAAATGCCCTCCGTAGCTCTGTGTAATGGGAACTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR TCA 90 bp | CGAAAGCCCTTGAGCTCTGGAGCCAGATCACTGGGGTTCAAGTCGCCCCAAGATCTTCTTGCTGGCATATaGTTTACTCTGAGTGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: RKPLSSGARSLGFKSPQDLLAGI*FTLSEV Trigger: TACCTCACTCAGAGTAAATCATATGCCAGCAAGAAG...ATCTTGGGGCGACTTGAACCCCAGTGATCTGGCTCCAGAGCTCAAGGGCTTTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169652.3 |
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| 3UTR-3UTR GCA 90 bp | AGTGGTGTTCCAGGTGTTGAGGATATGGATCAGTCTGCTGGCAGCACTGTCCCCTCTGAGGGCCCCTTCTaGAACTTTGTTTCTATTGCT | + |
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Preference number: 2 (lower is better) Translates to: SGVPGVEDMDQSAGSTVPSEGPF*NFVSIA Trigger: AGCAATAGAAACAAAGTTGCAGAAGGGGCCCTCAGA...GGGGACAGTGCTGCCAGCAGACTGATCCATATCCTCAACACCTGGAACACCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGGTGTTCCAGGTGTTGAGGATATGGATCAGTCTGCTGGCAGCACTGTCCCCCTTCTTGCTGGCATATaGTTTACTCTGAGTGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: SGVPGVEDMDQSAGSTVPLLAGI*FTLSEV Trigger: TACCTCACTCAGAGTAAATCATATGCCAGCAAGAAG...GGGGACAGTGCTGCCAGCAGACTGATCCATATCCTCAACACCTGGAACACCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGTGTTAGTTTCCTTATGGGGAAGACATGCTCAGCTGGGGAACAGTAATGATTGCTTCTTCCGGGCTTaGCAGGGAAGCAGCTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: LVLVSLWGRHAQLGNSNDCFFRA*QGSSCL Trigger: CAGACAGCTGCTTCCCTGCCAAGCCCGGAAGAAGCA...ATCATTACTGTTCCCCAGCTGAGCATGTCTTCCCCATAAGGAAACTAACACTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR TCA 90 bp | AGGATATGGATCAGTCTGCTGGCAGCACTGTCCCCTGAGTGTTTGGGGTACTCTGCCTCTAAACGTATATaGAGTTCCCATTACACAGAG | + |
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Preference number: 2 (lower is better) Translates to: RIWISLLAALSPECLGYSASKRI*SSHYTE Trigger: CTCTGTGTAATGGGAACTTCATATACGTTTAGAGGC...AGAGTACCCCAAACACTCAGGGGACAGTGCTGCCAGCAGACTGATCCATATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR GCA 90 bp | GGCAGTGGTGTTCCAGGTGTTGAGGATATGGATCAGTCTGCTGGCAGCACTGTCAAATTCTCCCATCCTTaGCTACTTAGCTCCTTAACA | + |
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Preference number: 2 (lower is better) Translates to: GSGVPGVEDMDQSAGSTVKFSHP*LLSSLT Trigger: TGTTAAGGAGCTAAGTAGGCAAGGATGGGAGAATTT...GACAGTGCTGCCAGCAGACTGATCCATATCCTCAACACCTGGAACACCACTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR CAA 90 bp | GTGTCAACCTCACAGGATATAGCTCTACCATCTCAAACCCTATTTTaGTCAGGTTTGCTCTCAAGCAGCAGGGCTAGTGGGGTGCATTGT | + |
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Preference number: 2 (lower is better) Translates to: VSTSQDIALPSQTLF*SGLLSSSRASGVHC Trigger: ACAATGCACCCCACTAGCCCTGCTGCTTGAGAGCAAACCTGACAAAAATAGGGTTTGAGATGGTAGAGCTATATCCTGTGAGGTTGACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR TCA 90 bp | CCGCATGTATCTTGTCTAGTGTTAGTTTCCTTATGGGGAAGACATGCTCAGCTGTGGGTATTTGAAAACTaGAGGGAACCCGGAGCTACC | + |
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Preference number: 2 (lower is better) Translates to: PHVSCLVLVSLWGRHAQLWVFEN*REPGAT Trigger: GGTAGCTCCGGGTTCCCTTCAGTTTTCAAATACCCA...CAGCTGAGCATGTCTTCCCCATAAGGAAACTAACACTAGACAAGATACATGCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTGCATCCCAACCATAGAATTAGTTCTGAAAGAGCCCACTTCTCTAGAAAACTACATGTGGCCCATCTaGGCCTCAGGGGATCCTACT | + |
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Preference number: 2 (lower is better) Translates to: PCIPTIELVLKEPTSLENYMWPI*ASGDPT Trigger: AGTAGGATCCCCTGAGGCCCAGATGGGCCACATGTA...GTTTTCTAGAGAAGTGGGCTCTTTCAGAACTAATTCTATGGTTGGGATGCAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR CAA 90 bp | TTCTCCCGGCTTTGTTTATTCCTGGATCCTGAGACTTTGGACATATaGGGTGTGAGGTGGGCACTTGGTGCAAGTTCATTGACAAATGAG | + |
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Preference number: 2 (lower is better) Translates to: FSRLCLFLDPETLDI*GVRWALGASSLTNE Trigger: CTCATTTGTCAATGAACTTGCACCAAGTGCCCACCTCACACCCAATATGTCCAAAGTCTCAGGATCCAGGAATAAACAAAGCCGGGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR GCA 90 bp | AAACCCTATTTTTGTCAGGTTTGCTCTCAAGCAGCAGGGCTAGTGGGGTGCATTTCTGAGGGCCCCTTCTaGAACTTTGTTTCTATTGCT | + |
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Preference number: 2 (lower is better) Translates to: KPYFCQVCSQAAGLVGCISEGPF*NFVSIA Trigger: AGCAATAGAAACAAAGTTGCAGAAGGGGCCCTCAGA...AATGCACCCCACTAGCCCTGCTGCTTGAGAGCAAACCTGACAAAAATAGGGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGTGTTAGTTTCCTTATGGGGAAGACATGCTCAGCTGGGGAACAGTAATGATGCCCCGAGTTCTACTTaGAACCTTCCCAGAAACGTA | + |
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Preference number: 2 (lower is better) Translates to: LVLVSLWGRHAQLGNSNDAPSST*NLPRNV Trigger: TACGTTTCTGGGAAGGTTGCAAGTAGAACTCGGGGC...ATCATTACTGTTCCCCAGCTGAGCATGTCTTCCCCATAAGGAAACTAACACTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGTTTCCTTATGGGGAAGACATGCTCAGCTGGGGAACAGTAATGATCATATGTGGTGTTCCAGGTGTTaGGGATATGGATCAGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: LVSLWGRHAQLGNSNDHMWCSRC*GYGSVC Trigger: GCAGACTGATCCATATCCTCAACACCTGGAACACCA...CATATGATCATTACTGTTCCCCAGCTGAGCATGTCTTCCCCATAAGGAAACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTGCATCCCAACCATAGAATTAGTTCTGAAAGAGCCCACTTCTCTAGAAAACGCCCCGAGTTCTACTTaGAACCTTCCCAGAAACGTA | + |
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Preference number: 2 (lower is better) Translates to: PCIPTIELVLKEPTSLENAPSST*NLPRNV Trigger: TACGTTTCTGGGAAGGTTGCAAGTAGAACTCGGGGC...GTTTTCTAGAGAAGTGGGCTCTTTCAGAACTAATTCTATGGTTGGGATGCAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGTTTCCTTATGGGGAAGACATGCTCAGCTGGGGAACAGTAATGATCATATGTATTTTTGTCAGGTTTaGTCTCAAGCAGCAGGGCTA | + |
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Preference number: 2 (lower is better) Translates to: LVSLWGRHAQLGNSNDHMYFCQV*SQAAGL Trigger: TAGCCCTGCTGCTTGAGAGCAAACCTGACAAAAATA...CATATGATCATTACTGTTCCCCAGCTGAGCATGTCTTCCCCATAAGGAAACTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR TCA 72 bp | ATTGCTTCTTCCGGGCTTGGCAGGGAAGCAGCTGTCTaGGACTGGGAGGGGCTGTGGAGAGACCTCGAGAGT | + |
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Preference number: 3 (lower is better) Translates to: IASSGLGREAAV*DWEGLWRDLES Trigger: ACTCTCGAGGTCTCTCCACAGCCCCTCCCAGTCTCAGACAGCTGCTTCCCTGCCAAGCCCGGAAGAAGCAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR TCA 72 bp | GTCCCCGAACGCTTCTCCCTCCTGAGGCAGGCAAGCTaGTGGCACGCAGATTCTCCCGGCTTTGTTTATTCC | + |
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Preference number: 3 (lower is better) Translates to: VPERFSLLRQAS*WHADSPGFVYS Trigger: GGAATAAACAAAGCCGGGAGAATCTGCGTGCCATCAGCTTGCCTGCCTCAGGAGGGAGAAGCGTTCGGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169652.3 |
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| 3UTR CCA 72 bp | CCGCCCCCAAAGCCACATGACAACATGGTATACATGTaGCCCATCTGGGCCTCAGGGGATCCTACTGGGCAT | + |
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Preference number: 3 (lower is better) Translates to: PPPKPHDNMVYM*PIWASGDPTGH Trigger: ATGCCCAGTAGGATCCCCTGAGGCCCAGATGGGCCACATGTATACCATGTTGTCATGTGGCTTTGGGGGCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| 3UTR CCA 72 bp | ATCCAGGTTTCCCGCCCCCAAAGCCACATGACAACATaGTATACATGTGGCCCATCTGGGCCTCAGGGGATC | + |
|
Preference number: 3 (lower is better) Translates to: IQVSRPQSHMTT*YTCGPSGPQGI Trigger: GATCCCCTGAGGCCCAGATGGGCCACATGTATACCATGTTGTCATGTGGCTTTGGGGGCGGGAAACCTGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| 3UTR-3UTR CAA 90 bp | ACGTACGCCTACCTACCTTCCCAATTTCCTCTCACACCTCATCCAGGTTTCCCGTCGAGAGTTCATGAGTaGCCTCCCCCAAAACAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: TYAYLPSQFPLTPHPGFPSRVHE*PPPKQG Trigger: CCCCTGTTTTGGGGGAGGCAACTCATGAACTCTCGA...CGGGAAACCTGGATGAGGTGTGAGAGGAAATTGGGAAGGTAGGTAGGCGTACGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| 3UTR TCA 72 bp | TGTCTATCTAGGGGACTGCAAGGAGTGACTAGGCAGTaGCAGCTGGCTCCAGCACTCGATGGCCTATTACAC | + |
|
Preference number: 3 (lower is better) Translates to: CLSRGLQGVTRQ*QLAPALDGLLH Trigger: GTGTAATAGGCCATCGAGTGCTGGAGCCAGCTGTCACTGCCTAGTCACTCCTTGCAGTCCCCTAGATAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169652.3 |
||
| 3UTR CCA 72 bp | AAGCCACATGACAACATGGTATACATGTGGCCCATCTaGGCCTCAGGGGATCCTACTGGGCATGCCAGCATA | + |
|
Preference number: 3 (lower is better) Translates to: KPHDNMVYMWPI*ASGDPTGHASI Trigger: TATGCTGGCATGCCCAGTAGGATCCCCTGAGGCCCAGATGGGCCACATGTATACCATGTTGTCATGTGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTGAGTGCACACAGTCTGTATTCTGTAGGAGGAGGGGCTTCCCAAGCCCGCATGCAACTTTGTTTCTATaGCTTCTTCCGGGCTTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: AECTQSVFCRRRGFPSPHATLFL*LLPGLA Trigger: TGCCAAGCCCGGAAGAAGCAATAGAAACAAAGTTGC...ATGCGGGCTTGGGAAGCCCCTCCTCCTACAGAATACAGACTGTGTGCACTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| 3UTR CCA 72 bp | TGGTATATGGCAGTGGTGTTCCAGGTGTTGAGGATATaGATCAGTCTGCTGGCAGCACTGTCCCCTGAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: WYMAVVFQVLRI*ISLLAALSPEC Trigger: ACACTCAGGGGACAGTGCTGCCAGCAGACTGATCCATATCCTCAACACCTGGAACACCACTGCCATATACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGTGGTGTTCCAGGTGTTGAGGATATGGATCAGTCTGCTGGCAGCACTGTCGCCCCTTCTGCAACTTaGTTTCTATTGCTTCTTCCG | + |
|
Preference number: 3 (lower is better) Translates to: GSGVPGVEDMDQSAGSTVAPSAT*FLLLLP Trigger: CGGAAGAAGCAATAGAAACAAAGTTGCAGAAGGGGC...GACAGTGCTGCCAGCAGACTGATCCATATCCTCAACACCTGGAACACCACTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGTGCAAGTTCATTGACAAATGAGGGAGAAAGTACTTTGGGAGTCTTGGGGTTGCTTCTTCCGGGCTaGGCAGGGAAGCAGCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LGASSLTNEGESTLGVLGLLLPG*AGKQLS Trigger: AGACAGCTGCTTCCCTGCCAAGCCCGGAAGAAGCAA...CCCCAAGACTCCCAAAGTACTTTCTCCCTCATTTGTCAATGAACTTGCACCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| 3UTR-3UTR CAA 90 bp | ACGTACGCCTACCTACCTTCCCAATTTCCTCTCACACCTCATCCAGGTTTCCCGGCCCCTTCTGCAACTTaGTTTCTATTGCTTCTTCCG | + |
|
Preference number: 3 (lower is better) Translates to: TYAYLPSQFPLTPHPGFPAPSAT*FLLLLP Trigger: CGGAAGAAGCAATAGAAACAAAGTTGCAGAAGGGGC...CGGGAAACCTGGATGAGGTGTGAGAGGAAATTGGGAAGGTAGGTAGGCGTACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTGAGTGCACACAGTCTGTATTCTGTAGGAGGAGGGGCTTCCCAAGCCCGCATGAGGTAACTGCTAGGTaGACTTCTTATACAACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: AECTQSVFCRRRGFPSPHEVTAR*TSYTTL Trigger: CAAGGTTGTATAAGAAGTCAACCTAGCAGTTACCTC...ATGCGGGCTTGGGAAGCCCCTCCTCCTACAGAATACAGACTGTGTGCACTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| 3UTR TCA 72 bp | AGGCTTCCAGAACCCCTGGGGGCCTCTAAACGTATATaGAGTTCCCATTACACAGAGCTACGGAGGGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: RLPEPLGASKRI*SSHYTELRRAF Trigger: AAATGCCCTCCGTAGCTCTGTGTAATGGGAACTTCATATACGTTTAGAGGCCCCCAGGGGTTCTGGAAGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| 3UTR TCA 72 bp | ACAGCTGGCTCCAGCACTCGATGGCCTATTACACTGTaGCTCGACCAGGAGAGGGATGAACATATAGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TAGSSTRWPITL*LDQERDEHIEV Trigger: CACTTCTATATGTTCATCCCTCTCCTGGTCGAGTCACAGTGTAATAGGCCATCGAGTGCTGGAGCCAGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169652.3 |
||
| 3UTR-3UTR CAA 90 bp | CCGCATGTATCTTGTCTAGTGTTAGTTTCCTTATGGGGAAGACATGCTCAGCTGTCGAGAGTTCATGAGTaGCCTCCCCCAAAACAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: PHVSCLVLVSLWGRHAQLSRVHE*PPPKQG Trigger: CCCCTGTTTTGGGGGAGGCAACTCATGAACTCTCGA...CAGCTGAGCATGTCTTCCCCATAAGGAAACTAACACTAGACAAGATACATGCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGTGGTGTTCCAGGTGTTGAGGATATGGATCAGTCTGCTGGCAGCACTGTCGAGGTAACTGCTAGGTaGACTTCTTATACAACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: GSGVPGVEDMDQSAGSTVEVTAR*TSYTTL Trigger: CAAGGTTGTATAAGAAGTCAACCTAGCAGTTACCTC...GACAGTGCTGCCAGCAGACTGATCCATATCCTCAACACCTGGAACACCACTGCC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| 3UTR GCA 72 bp | ACAGAGCTACGGAGGGCATTTCTCCACCCCATGGGCTaGTCAAAGTTTACAGAATCAGTTCCCTGTGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: TELRRAFLHPMG*SKFTESVPCEH Trigger: ATGTTCACAGGGAACTGATTCTGTAAACTTTGAGCAGCCCATGGGGTGGAGAAATGCCCTCCGTAGCTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| 3UTR GCA 72 bp | GCCTTCTGCTCCCTTCTGAGAAAATTCTCCCATCCTTaGCTACTTAGCTCCTTAACAATCCACCATCACCCC | + |
|
Preference number: 3 (lower is better) Translates to: AFCSLLRKFSHP*LLSSLTIHHHP Trigger: GGGGTGATGGTGGATTGTTAAGGAGCTAAGTAGGCAAGGATGGGAGAATTTTCTCAGAAGGGAGCAGAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| 3UTR CCA 72 bp | ATTACACAGAGCTACGGAGGGCATTTCTCCACCCCATaGGCTGCTCAAAGTTTACAGAATCAGTTCCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: ITQSYGGHFSTP*AAQSLQNQFPV Trigger: CACAGGGAACTGATTCTGTAAACTTTGAGCAGCCCATGGGGTGGAGAAATGCCCTCCGTAGCTCTGTGTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAGTTTCCTTATGGGGAAGACATGCTCAGCTGGGGAACAGTAATGATCATATGTTGCTTCTTCCGGGCTaGGCAGGGAAGCAGCTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LVSLWGRHAQLGNSNDHMLLLPG*AGKQLS Trigger: AGACAGCTGCTTCCCTGCCAAGCCCGGAAGAAGCAA...CATATGATCATTACTGTTCCCCAGCTGAGCATGTCTTCCCCATAAGGAAACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| 3UTR TCA 72 bp | TTCCTAAGCCCTGAGCGCCTGTGGGTATTTGAAAACTaGAGGGAACCCGGAGCTACCTCAAACGTAATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: FLSPERLWVFEN*REPGATSNVIS Trigger: AGAAATTACGTTTGAGGTAGCTCCGGGTTCCCTTCAGTTTTCAAATACCCACAGGCGCTCAGGGCTTAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| 3UTR TCA 72 bp | CATCAGACCCACTCGATGATAGGGCTTAACTCCAAGTaGACAGAGGAGAGGGAAGATAGCAACAGCCATGAT | + |
|
Preference number: 3 (lower is better) Translates to: HQTHSMIGLNSK*TEEREDSNSHD Trigger: ATCATGGCTGTTGCTATCTTCCCTCTCCTCTGTTCACTTGGAGTTAAGCCCTATCATCGAGTGGGTCTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169652.3 |
||
| 3UTR-3UTR CAA 90 bp | CCGCATGTATCTTGTCTAGTGTTAGTTTCCTTATGGGGAAGACATGCTCAGCTGTTTCTCCCTGTGTCCTaGCATTCCTGTTTCAACCCC | + |
|
Preference number: 3 (lower is better) Translates to: PHVSCLVLVSLWGRHAQLFLPVS*HSCFNP Trigger: GGGGTTGAAACAGGAATGCAAGGACACAGGGAGAAA...CAGCTGAGCATGTCTTCCCCATAAGGAAACTAACACTAGACAAGATACATGCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| 3UTR CCA 72 bp | ATACATGTGGCCCATCTGGGCCTCAGGGGATCCTACTaGGCATGCCAGCATAATGAAATACTTTTAGTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: IHVAHLGLRGSY*ACQHNEILLVY Trigger: ATAAACTAAAAGTATTTCATTATGCTGGCATGCCCAGTAGGATCCCCTGAGGCCCAGATGGGCCACATGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| CDS-3UTR TCA 90 bp | CGAAAGCCCTTGAGCTCTGGAGCCAGATCACTGGGGTTCAAGTCGCCCCAAGATTGCGGGTCAGCACCTTaGGGCAGAAGGCCAGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RKPLSSGARSLGFKSPQDCGSAP*GRRPAD Trigger: GTCTGCTGGCCTTCTGCCTCAAGGTGCTGACCCGCA...ATCTTGGGGCGACTTGAACCCCAGTGATCTGGCTCCAGAGCTCAAGGGCTTTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169652.3 |
||
| CDS-3UTR TCA 90 bp | ATGAAGTTCCCATTACACAGAGCTACGGAGGGCATTTCTCCACCCCATGGGCTGTGCGGGTCAGCACCTTaGGGCAGAAGGCCAGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: MKFPLHRATEGISPPHGLCGSAP*GRRPAD Trigger: GTCTGCTGGCCTTCTGCCTCAAGGTGCTGACCCGCA...CAGCCCATGGGGTGGAGAAATGCCCTCCGTAGCTCTGTGTAATGGGAACTTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGTGTTCCAGGTGTTGAGGATATGGATCAGTCTGCTGGCAGCACTGTCCCCCTCCAGGTACCTCAGTaGCAGCCCGTTGACCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SGVPGVEDMDQSAGSTVPLQVPQ*QPVDPH Trigger: GTGTGGGTCAACGGGCTGCCACTGAGGTACCTGGAG...GGGGACAGTGCTGCCAGCAGACTGATCCATATCCTCAACACCTGGAACACCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| CDS-3UTR GCA 90 bp | ATGAAGTTCCCATTACACAGAGCTACGGAGGGCATTTCTCCACCCCATGGGCTGTGGTACAGGCTCACCTaGAGGACTGTGAGGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: MKFPLHRATEGISPPHGLWYRLT*RTVRGL Trigger: GAGGCCCCTCACAGTCCTGCAGGTGAGCCTGTACCA...CAGCCCATGGGGTGGAGAAATGCCCTCCGTAGCTCTGTGTAATGGGAACTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| CDS-3UTR GCA 90 bp | GCTGAGTGCACACAGTCTGTATTCTGTAGGAGGAGGGGCTTCCCAAGCCCGCATAGAAGGCCAGCAGACTaGTGCCTTTCTCCAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: AECTQSVFCRRRGFPSPHRRPAD*CLSPGR Trigger: CCTACCTGGAGAAAGGCAGCAGTCTGCTGGCCTTCT...ATGCGGGCTTGGGAAGCCCCTCCTCCTACAGAATACAGACTGTGTGCACTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| CDS-3UTR GCA 90 bp | AGGATATGGATCAGTCTGCTGGCAGCACTGTCCCCTGAGTGTTTGGGGTACTCTGTGCCCAAGGGAACCTaGTCCAGGTACCTCAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RIWISLLAALSPECLGYSVPKGT*SRYLSG Trigger: GCCACTGAGGTACCTGGAGCAGGTTCCCTTGGGCAC...AGAGTACCCCAAACACTCAGGGGACAGTGCTGCCAGCAGACTGATCCATATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGTGTTCCAGGTGTTGAGGATATGGATCAGTCTGCTGGCAGCACTGTCCCCAGGCCAGCAGACTGCTaGCTTTCTCCAGGTAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SGVPGVEDMDQSAGSTVPRPADC*LSPGRV Trigger: AACCCTACCTGGAGAAAGGCAGCAGTCTGCTGGCCT...GGGGACAGTGCTGCCAGCAGACTGATCCATATCCTCAACACCTGGAACACCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| CDS-3UTR CCA 90 bp | ATGAAGTTCCCATTACACAGAGCTACGGAGGGCATTTCTCCACCCCATGGGCTGAGCTGCAGCTGGAGATaGGTGTTCTGTCCTCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MKFPLHRATEGISPPHGLSCSWR*VFCPRP Trigger: TGGGCGAGGACAGAACACCCATCTCCAGCTGCAGCT...CAGCCCATGGGGTGGAGAAATGCCCTCCGTAGCTCTGTGTAATGGGAACTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| CDS-3UTR GCA 90 bp | CCCTGGGGGCCTCTAAACGTATATGAAGTTCCCATTACACAGAGCTACGGAGGGGACAACTGTGGCAGCTaGAGCTGGAGATGGGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PWGPLNVYEVPITQSYGGDNCGS*SWRWVF Trigger: GAACACCCATCTCCAGCTGCAGCTGCCACAGTTGTC...CCCTCCGTAGCTCTGTGTAATGGGAACTTCATATACGTTTAGAGGCCCCCAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| CDS-3UTR GCA 90 bp | AGGATATGGATCAGTCTGCTGGCAGCACTGTCCCCTGAGTGTTTGGGGTACTCTGACAACTGTGGCAGCTaGAGCTGGAGATGGGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RIWISLLAALSPECLGYSDNCGS*SWRWVF Trigger: GAACACCCATCTCCAGCTGCAGCTGCCACAGTTGTC...AGAGTACCCCAAACACTCAGGGGACAGTGCTGCCAGCAGACTGATCCATATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGTGGTGTTCCAGGTGTTGAGGATATGGATCAGTCTGCTGGCAGCACTGTCCTGTCTCCTGAGCCTTaGGTCTGTAAATCAGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSGVPGVEDMDQSAGSTVLSPEP*VCKSGV Trigger: CACCCCTGATTTACAGACCCAAGGCTCAGGAGACAG...GACAGTGCTGCCAGCAGACTGATCCATATCCTCAACACCTGGAACACCACTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| 3UTR CAA 72 bp | AGTGGGGTGCATTGTCTGAGGGCCCCTTCTGCAACTTaGTTTCTATTGCTTCTTCCGGGCTTGGCAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGVHCLRAPSAT*FLLLLPGLAGK Trigger: CTTCCCTGCCAAGCCCGGAAGAAGCAATAGAAACAAAGTTGCAGAAGGGGCCCTCAGACAATGCACCCCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| 3UTR CAA 72 bp | TGGATCAGTCTGCTGGCAGCACTGTCCCCTGAGTGTTaGGGGTACTCTAGTGTAGGATCTGGTGGTATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WISLLAALSPEC*GYSSVGSGGMV Trigger: CACCATACCACCAGATCCTACACTAGAGTACCCCAAACACTCAGGGGACAGTGCTGCCAGCAGACTGATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| CDS-3UTR TCA 90 bp | CCCTGGGGGCCTCTAAACGTATATGAAGTTCCCATTACACAGAGCTACGGAGGGTCAGGGGTGAAGGGCTaGGATGGAAGTAGCAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: PWGPLNVYEVPITQSYGGSGVKG*DGSSRQ Trigger: TTGTCTGCTACTTCCATCTCAGCCCTTCACCCCTGA...CCCTCCGTAGCTCTGTGTAATGGGAACTTCATATACGTTTAGAGGCCCCCAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| 3UTR CAA 72 bp | CATTGTCTGAGGGCCCCTTCTGCAACTTTGTTTCTATaGCTTCTTCCGGGCTTGGCAGGGAAGCAGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HCLRAPSATLFL*LLPGLAGKQLS Trigger: AGACAGCTGCTTCCCTGCCAAGCCCGGAAGAAGCAATAGAAACAAAGTTGCAGAAGGGGCCCTCAGACAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| CDS-3UTR TCA 90 bp | AGTGGTGTTCCAGGTGTTGAGGATATGGATCAGTCTGCTGGCAGCACTGTCCCCTCTGTAAATCAGGGGTaGAGGGCTGAGATGGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SGVPGVEDMDQSAGSTVPSVNQG*RAEMEV Trigger: TACTTCCATCTCAGCCCTTCACCCCTGATTTACAGA...GGGGACAGTGCTGCCAGCAGACTGATCCATATCCTCAACACCTGGAACACCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| CDS-3UTR GCA 90 bp | CTTGGTGCAAGTTCATTGACAAATGAGGGAGAAAGTACTTTGGGAGTCTTGGGGTGGTACAGGCTCACCTaGAGGACTGTGAGGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGASSLTNEGESTLGVLGWYRLT*RTVRGL Trigger: GAGGCCCCTCACAGTCCTGCAGGTGAGCCTGTACCA...CCCCAAGACTCCCAAAGTACTTTCTCCCTCATTTGTCAATGAACTTGCACCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| CDS-3UTR CCA 90 bp | CAGAACCCCTGGGGGCCTCTAAACGTATATGAAGTTCCCATTACACAGAGCTACTGTGGCAGCTGCAGCTaGAGATGGGTGTTCTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QNPWGPLNVYEVPITQSYCGSCS*RWVFCP Trigger: AGGACAGAACACCCATCTCCAGCTGCAGCTGCCACA...GTAGCTCTGTGTAATGGGAACTTCATATACGTTTAGAGGCCCCCAGGGGTTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| CDS-3UTR CCA 90 bp | CAGAACCCCTGGGGGCCTCTAAACGTATATGAAGTTCCCATTACACAGAGCTACGTAGCGAGACAACTGTaGCAGCTGCAGCTGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: QNPWGPLNVYEVPITQSYVARQL*QLQLEM Trigger: CATCTCCAGCTGCAGCTGCCACAGTTGTCTCGCTAC...GTAGCTCTGTGTAATGGGAACTTCATATACGTTTAGAGGCCCCCAGGGGTTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| CDS-3UTR CCA 90 bp | CTAGTGTTAGTTTCCTTATGGGGAAGACATGCTCAGCTGGGGAACAGTAATGATCTCCAGGTACCTCAGTaGCAGCCCGTTGACCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LVLVSLWGRHAQLGNSNDLQVPQ*QPVDPH Trigger: GTGTGGGTCAACGGGCTGCCACTGAGGTACCTGGAG...ATCATTACTGTTCCCCAGCTGAGCATGTCTTCCCCATAAGGAAACTAACACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| CDS-3UTR TCA 90 bp | ACCTCACAGGATATAGCTCTACCATCTCAAACCCTATTTTTGTCAGGTTTGCTCTCAGTGGCAGCCCGTTaGCCCACACACAGCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TSQDIALPSQTLFLSGLLSVAAR*PTHSSC Trigger: GCAAGAGCTGTGTGTGGGTCAACGGGCTGCCACTGA...GAGCAAACCTGACAAAAATAGGGTTTGAGATGGTAGAGCTATATCCTGTGAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| CDS-3UTR TCA 90 bp | CCTTGCATCCCAACCATAGAATTAGTTCTGAAAGAGCCCACTTCTCTAGAAAACTCAGTGGCAGCCCGTTaGCCCACACACAGCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PCIPTIELVLKEPTSLENSVAAR*PTHSSC Trigger: GCAAGAGCTGTGTGTGGGTCAACGGGCTGCCACTGA...GTTTTCTAGAGAAGTGGGCTCTTTCAGAACTAATTCTATGGTTGGGATGCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| CDS-3UTR GCA 90 bp | CCGCATGTATCTTGTCTAGTGTTAGTTTCCTTATGGGGAAGACATGCTCAGCTGAGAAGGCCAGCAGACTaGTGCCTTTCTCCAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PHVSCLVLVSLWGRHAQLRRPAD*CLSPGR Trigger: CCTACCTGGAGAAAGGCAGCAGTCTGCTGGCCTTCT...CAGCTGAGCATGTCTTCCCCATAAGGAAACTAACACTAGACAAGATACATGCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
||
| CDS-3UTR GCA 90 bp | TTAGTTTCCTTATGGGGAAGACATGCTCAGCTGGGGAACAGTAATGATCATATGGTGCCCAAGGGAACCTaGTCCAGGTACCTCAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVSLWGRHAQLGNSNDHMVPKGT*SRYLSG Trigger: GCCACTGAGGTACCTGGAGCAGGTTCCCTTGGGCAC...CATATGATCATTACTGTTCCCCAGCTGAGCATGTCTTCCCCATAAGGAAACTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| CDS-3UTR CCA 90 bp | CCGCATGTATCTTGTCTAGTGTTAGTTTCCTTATGGGGAAGACATGCTCAGCTGGTAGCGAGACAACTGTaGCAGCTGCAGCTGGAGATG | + |
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Preference number: 4 (lower is better) Translates to: PHVSCLVLVSLWGRHAQLVARQL*QLQLEM Trigger: CATCTCCAGCTGCAGCTGCCACAGTTGTCTCGCTAC...CAGCTGAGCATGTCTTCCCCATAAGGAAACTAACACTAGACAAGATACATGCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| CDS-3UTR CCA 90 bp | TTAGTTTCCTTATGGGGAAGACATGCTCAGCTGGGGAACAGTAATGATCATATGTGTGGCAGCTGCAGCTaGAGATGGGTGTTCTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LVSLWGRHAQLGNSNDHMCGSCS*RWVFCP Trigger: AGGACAGAACACCCATCTCCAGCTGCAGCTGCCACA...CATATGATCATTACTGTTCCCCAGCTGAGCATGTCTTCCCCATAAGGAAACTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| CDS-3UTR GCA 90 bp | CCGCATGTATCTTGTCTAGTGTTAGTTTCCTTATGGGGAAGACATGCTCAGCTGGGACTAGCATCTGGATaGCAGAGAAGGAGATTCTGT | + |
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Preference number: 4 (lower is better) Translates to: PHVSCLVLVSLWGRHAQLGLASG*QRRRFC Trigger: ACAGAATCTCCTTCTCTGGCATCCAGATGCTAGTCC...CAGCTGAGCATGTCTTCCCCATAAGGAAACTAACACTAGACAAGATACATGCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| CDS-3UTR CCA 90 bp | TTAGTTTCCTTATGGGGAAGACATGCTCAGCTGGGGAACAGTAATGATCATATGCTGTCTCCTGAGCCTTaGGTCTGTAAATCAGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LVSLWGRHAQLGNSNDHMLSPEP*VCKSGV Trigger: CACCCCTGATTTACAGACCCAAGGCTCAGGAGACAG...CATATGATCATTACTGTTCCCCAGCTGAGCATGTCTTCCCCATAAGGAAACTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR CAA 72 bp | ATAGCTCTACCATCTCAAACCCTATTTTTGTCAGGTTaGCTCTCAAGCAGCAGGGCTAGTGGGGTGCATTGT | + |
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Preference number: 4 (lower is better) Translates to: IALPSQTLFLSG*LSSSRASGVHC Trigger: ACAATGCACCCCACTAGCCCTGCTGCTTGAGAGCAAACCTGACAAAAATAGGGTTTGAGATGGTAGAGCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR CAA 72 bp | TCACAGGATATAGCTCTACCATCTCAAACCCTATTTTaGTCAGGTTTGCTCTCAAGCAGCAGGGCTAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SQDIALPSQTLF*SGLLSSSRASG Trigger: CCCACTAGCCCTGCTGCTTGAGAGCAAACCTGACAAAAATAGGGTTTGAGATGGTAGAGCTATATCCTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| 3UTR CAA 72 bp | ATATTGGGTGTGAGGTGGGCACTTGGTGCAAGTTCATaGACAAATGAGGGAGAAAGTACTTTGGGAGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: ILGVRWALGASS*TNEGESTLGVL Trigger: CAAGACTCCCAAAGTACTTTCTCCCTCATTTGTCAATGAACTTGCACCAAGTGCCCACCTCACACCCAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| CDS-3UTR GCA 90 bp | ACCTCACAGGATATAGCTCTACCATCTCAAACCCTATTTTTGTCAGGTTTGCTCGGACTAGCATCTGGATaGCAGAGAAGGAGATTCTGT | + |
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Preference number: 4 (lower is better) Translates to: TSQDIALPSQTLFLSGLLGLASG*QRRRFC Trigger: ACAGAATCTCCTTCTCTGGCATCCAGATGCTAGTCC...GAGCAAACCTGACAAAAATAGGGTTTGAGATGGTAGAGCTATATCCTGTGAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| CDS CCA 90 bp | CCAACCAACAGCCGGCTGGCGTCATGTTGCAGCTGCTGTGGGACGTaGGCAAAGGCGACCGGGCCCTGTGTAGGGTGGTACAGGCTCACC | + |
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Preference number: 5 (lower is better) Translates to: PTNSRLASCCSCCGT*AKATGPCVGWYRLT Trigger: GGTGAGCCTGTACCACCCTACACAGGGCCCGGTCGCCTTTGCCCACGTCCCACAGCAGCTGCAACATGACGCCAGCCGGCTGTTGGTTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| CDS-3UTR CAA 90 bp | CGAAAGCCCTTGAGCTCTGGAGCCAGATCACTGGGGTTCAAGTCGCCCCAAGATCCGGCTGGCGTCATGTaGCAGCTGCTGTGGGACGTG | + |
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Preference number: 5 (lower is better) Translates to: RKPLSSGARSLGFKSPQDPAGVM*QLLWDV Trigger: CACGTCCCACAGCAGCTGCAACATGACGCCAGCCGG...ATCTTGGGGCGACTTGAACCCCAGTGATCTGGCTCCAGAGCTCAAGGGCTTTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169652.3 |
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| CDS GCA 90 bp | TGGATGCCAGAGAAGGAGATTCTGTTGATGGTGCCCAAGGGAACCTaGTCCAGGTACCTCAGTGGCAGCCCGTTGACCCACACACAGCTC | + |
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Preference number: 5 (lower is better) Translates to: WMPEKEILLMVPKGT*SRYLSGSPLTHTQL Trigger: GAGCTGTGTGTGGGTCAACGGGCTGCCACTGAGGTACCTGGAGCAGGTTCCCTTGGGCACCATCAACAGAATCTCCTTCTCTGGCATCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| CDS TCA 90 bp | CCTCTTTGCGGACTAGCATCTGGATGCCAGAGAAGGAGATTCTGTTaGTGGTGCCCAAGGGAACCTGCTCCAGGTACCTCAGTGGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: PLCGLASGCQRRRFC*WCPREPAPGTSVAA Trigger: GGCTGCCACTGAGGTACCTGGAGCAGGTTCCCTTGGGCACCATCAACAGAATCTCCTTCTCTGGCATCCAGATGCTAGTCCGCAAAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| CDS-3UTR CAA 90 bp | ACGTACGCCTACCTACCTTCCCAATTTCCTCTCACACCTCATCCAGGTTTCCCGACCCACACACAGCTCTaGCGGGTCAGCACCTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: TYAYLPSQFPLTPHPGFPTHTQL*RVSTLR Trigger: CCTCAAGGTGCTGACCCGCAAGAGCTGTGTGTGGGT...CGGGAAACCTGGATGAGGTGTGAGAGGAAATTGGGAAGGTAGGTAGGCGTACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| CDS-3UTR CAA 90 bp | ATGAAGTTCCCATTACACAGAGCTACGGAGGGCATTTCTCCACCCCATGGGCTGCTCAGTGGCAGCCCGTaGACCCACACACAGCTCTTG | + |
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Preference number: 5 (lower is better) Translates to: MKFPLHRATEGISPPHGLLSGSP*THTQLL Trigger: CAAGAGCTGTGTGTGGGTCAACGGGCTGCCACTGAG...CAGCCCATGGGGTGGAGAAATGCCCTCCGTAGCTCTGTGTAATGGGAACTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| CDS-3UTR CAA 90 bp | GCTGAGTGCACACAGTCTGTATTCTGTAGGAGGAGGGGCTTCCCAAGCCCGCATGAGAAGGAGATTCTGTaGATGGTGCCCAAGGGAACC | + |
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Preference number: 5 (lower is better) Translates to: AECTQSVFCRRRGFPSPHEKEIL*MVPKGT Trigger: GGTTCCCTTGGGCACCATCAACAGAATCTCCTTCTC...ATGCGGGCTTGGGAAGCCCCTCCTCCTACAGAATACAGACTGTGTGCACTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| CDS-3UTR CAA 90 bp | CCGCATGTATCTTGTCTAGTGTTAGTTTCCTTATGGGGAAGACATGCTCAGCTGCCGGCTGGCGTCATGTaGCAGCTGCTGTGGGACGTG | + |
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Preference number: 5 (lower is better) Translates to: PHVSCLVLVSLWGRHAQLPAGVM*QLLWDV Trigger: CACGTCCCACAGCAGCTGCAACATGACGCCAGCCGG...CAGCTGAGCATGTCTTCCCCATAAGGAAACTAACACTAGACAAGATACATGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| CDS-3UTR CAA 90 bp | CAGAACCCCTGGGGGCCTCTAAACGTATATGAAGTTCCCATTACACAGAGCTACGAGAAGGAGATTCTGTaGATGGTGCCCAAGGGAACC | + |
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Preference number: 5 (lower is better) Translates to: QNPWGPLNVYEVPITQSYEKEIL*MVPKGT Trigger: GGTTCCCTTGGGCACCATCAACAGAATCTCCTTCTC...GTAGCTCTGTGTAATGGGAACTTCATATACGTTTAGAGGCCCCCAGGGGTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| CDS-3UTR CAA 90 bp | ACCTCACAGGATATAGCTCTACCATCTCAAACCCTATTTTTGTCAGGTTTGCTCACCCACACACAGCTCTaGCGGGTCAGCACCTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: TSQDIALPSQTLFLSGLLTHTQL*RVSTLR Trigger: CCTCAAGGTGCTGACCCGCAAGAGCTGTGTGTGGGT...GAGCAAACCTGACAAAAATAGGGTTTGAGATGGTAGAGCTATATCCTGTGAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| CDS CAA 72 bp | CTGTCCTCGCCCAACCAACAGCCGGCTGGCGTCATGTaGCAGCTGCTGTGGGACGTGGGCAAAGGCGACCGG | + |
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Preference number: 6 (lower is better) Translates to: LSSPNQQPAGVM*QLLWDVGKGDR Trigger: CCGGTCGCCTTTGCCCACGTCCCACAGCAGCTGCAACATGACGCCAGCCGGCTGTTGGTTGGGCGAGGACAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| CDS CAA 90 bp | TGCTCCAGGTACCTCAGTGGCAGCCCGTTGACCCACACACAGCTCTaGCGGGTCAGCACCTTGAGGCAGAAGGCCAGCAGACTGCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: CSRYLSGSPLTHTQL*RVSTLRQKASRLLP Trigger: AGGCAGCAGTCTGCTGGCCTTCTGCCTCAAGGTGCTGACCCGCAAGAGCTGTGTGTGGGTCAACGGGCTGCCACTGAGGTACCTGGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| CDS CCA 72 bp | GATGGGTGTTCTGTCCTCGCCCAACCAACAGCCGGCTaGCGTCATGTTGCAGCTGCTGTGGGACGTGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: DGCSVLAQPTAG*RHVAAAVGRGQ Trigger: TTGCCCACGTCCCACAGCAGCTGCAACATGACGCCAGCCGGCTGTTGGTTGGGCGAGGACAGAACACCCATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| CDS CAA 90 bp | ATGGTGCCCAAGGGAACCTGCTCCAGGTACCTCAGTGGCAGCCCGTaGACCCACACACAGCTCTTGCGGGTCAGCACCTTGAGGCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: MVPKGTCSRYLSGSP*THTQLLRVSTLRQK Trigger: CTTCTGCCTCAAGGTGCTGACCCGCAAGAGCTGTGTGTGGGTCAACGGGCTGCCACTGAGGTACCTGGAGCAGGTTCCCTTGGGCACCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| CDS CAA 72 bp | TACCTCAGTGGCAGCCCGTTGACCCACACACAGCTCTaGCGGGTCAGCACCTTGAGGCAGAAGGCCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: YLSGSPLTHTQL*RVSTLRQKASR Trigger: TCTGCTGGCCTTCTGCCTCAAGGTGCTGACCCGCAAGAGCTGTGTGTGGGTCAACGGGCTGCCACTGAGGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| CDS CAA 72 bp | AAGGGAACCTGCTCCAGGTACCTCAGTGGCAGCCCGTaGACCCACACACAGCTCTTGCGGGTCAGCACCTTG | + |
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Preference number: 6 (lower is better) Translates to: KGTCSRYLSGSP*THTQLLRVSTL Trigger: CAAGGTGCTGACCCGCAAGAGCTGTGTGTGGGTCAACGGGCTGCCACTGAGGTACCTGGAGCAGGTTCCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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| CDS CAA 90 bp | CCCTCTTTGCGGACTAGCATCTGGATGCCAGAGAAGGAGATTCTGTaGATGGTGCCCAAGGGAACCTGCTCCAGGTACCTCAGTGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PSLRTSIWMPEKEIL*MVPKGTCSRYLSGS Trigger: GCTGCCACTGAGGTACCTGGAGCAGGTTCCCTTGGGCACCATCAACAGAATCTCCTTCTCTGGCATCCAGATGCTAGTCCGCAAAGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000169652.3 ENSMUST00000225063.2 |
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