Pregenerated sensors for TIFA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046688Ensembl transcript IDs: ENSMUST00000054483.14, ENSMUST00000163775.6, ENSMUST00000164447.3, ENSMUST00000171621.3
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCCGAGCTCTAAACCTGAAAAACAAAGGCTGCTACGAAATGATGTaGCCGGGCCAAGAGATGGCTGCCACCAAGACAAAGCATGGGGGT | + |
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Preference number: 1 (lower is better) Translates to: ARALNLKNKGCYEMM*PGQEMAATKTKHGG Trigger: ACCCCCATGCTTTGTCTTGGTGGCAGCCATCTCTTGGCCCGGTCACATCATTTCGTAGCAGCCTTTGTTTTTCAGGTTTAGAGCTCGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| 3UTR GCA 90 bp | GCCAAGAGATGGCTGCCACCAAGACAAAGCATGGGGGTAACATCATaGAGAAAAGCAACAAGGGTGACCTCATTACCCAGAAGACGTGTC | + |
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Preference number: 1 (lower is better) Translates to: AKRWLPPRQSMGVTS*RKATRVTSLPRRRV Trigger: GACACGTCTTCTGGGTAATGAGGTCACCCTTGTTGCTTTTCTGCATGATGTTACCCCCATGCTTTGTCTTGGTGGCAGCCATCTCTTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| 3UTR-3UTR CCA 90 bp | CACGCCACAGACACCAGTGAGCAATCTGCCCGAGCTCTAAACCTGAAAAACAAAGACCGGGCCAAGAGATaGCTGCCACCAAGACAAAGC | + |
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Preference number: 2 (lower is better) Translates to: HATDTSEQSARALNLKNKDRAKR*LPPRQS Trigger: GCTTTGTCTTGGTGGCAGCCATCTCTTGGCCCGGTC...TTTGTTTTTCAGGTTTAGAGCTCGGGCAGATTGCTCACTGGTGTCTGTGGCGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| 3UTR-3UTR GCA 90 bp | AACTTATTCCAGGACTCTAGTTCTACAAGCGCTAGCACGCCACAGACACCAGTGGGGCCAAGAGATGGCTaGCACCAAGACAAAGCATGG | + |
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Preference number: 2 (lower is better) Translates to: NLFQDSSSTSASTPQTPVGPRDG*HQDKAW Trigger: CCATGCTTTGTCTTGGTGGCAGCCATCTCTTGGCCC...CACTGGTGTCTGTGGCGTGCTAGCGCTTGTAGAACTAGAGTCCTGGAATAAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| 3UTR-3UTR TCA 90 bp | AACTTATTCCAGGACTCTAGTTCTACAAGCGCTAGCACGCCACAGACACCAGTGAAGGCTGCTACGAAATaGTGTGACCGGGCCAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: NLFQDSSSTSASTPQTPVKAATK*CDRAKR Trigger: TCTCTTGGCCCGGTCACATCATTTCGTAGCAGCCTT...CACTGGTGTCTGTGGCGTGCTAGCGCTTGTAGAACTAGAGTCCTGGAATAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| 3UTR-3UTR CCA 90 bp | GAAAGCGACACTACCGTTCCACAGAAAGAAAATCAAGGAGCTATTTCCCAAGTCGACCGGGCCAAGAGATaGCTGCCACCAAGACAAAGC | + |
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Preference number: 2 (lower is better) Translates to: ESDTTVPQKENQGAISQVDRAKR*LPPRQS Trigger: GCTTTGTCTTGGTGGCAGCCATCTCTTGGCCCGGTC...GACTTGGGAAATAGCTCCTTGATTTTCTTTCTGTGGAACGGTAGTGTCGCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| 3UTR-3UTR TCA 90 bp | AGAGTTCCAAGCCAGCCTGAGCTTCAAAGCAAGCTATTGTTGGAAAACAAAAACCTAACTTCCCCCACCTaGCCTCCTCCCCTACCCAAA | + |
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Preference number: 2 (lower is better) Translates to: RVPSQPELQSKLLLENKNLTSPT*PPPLPK Trigger: TTTGGGTAGGGGAGGAGGTCAGGTGGGGGAAGTTAG...GTTTTTGTTTTCCAACAATAGCTTGCTTTGAAGCTCAGGCTGGCTTGGAACTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000054483.14 ENSMUST00000171621.3 |
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| 3UTR-3UTR GCA 90 bp | CACGCCACAGACACCAGTGAGCAATCTGCCCGAGCTCTAAACCTGAAAAACAAAATGGGGGTAACATCATaGAGAAAAGCAACAAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: HATDTSEQSARALNLKNKMGVTS*RKATRV Trigger: CACCCTTGTTGCTTTTCTGCATGATGTTACCCCCAT...TTTGTTTTTCAGGTTTAGAGCTCGGGCAGATTGCTCACTGGTGTCTGTGGCGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| 3UTR-3UTR TCA 90 bp | AAAGCGACACTACCGTTCCACAGAAAGAAAATCAAGGAGCTATTTCCCAAGTCTAAGGCTGCTACGAAATaGTGTGACCGGGCCAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: KATLPFHRKKIKELFPKSKAATK*CDRAKR Trigger: TCTCTTGGCCCGGTCACATCATTTCGTAGCAGCCTT...AGACTTGGGAAATAGCTCCTTGATTTTCTTTCTGTGGAACGGTAGTGTCGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| 3UTR-3UTR TCA 90 bp | AAGCGACACTACCGTTCCACAGAAAGAAAATCAAGGAGCTATTTCCCAAGTCTTGCCATGGTGACTCAGTaGCTCAGCACTCTAGAACTT | + |
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Preference number: 2 (lower is better) Translates to: KRHYRSTERKSRSYFPSLAMVTQ*LSTLEL Trigger: AAGTTCTAGAGTGCTGAGTCACTGAGTCACCATGGC...AAGACTTGGGAAATAGCTCCTTGATTTTCTTTCTGTGGAACGGTAGTGTCGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| 3UTR-3UTR TCA 90 bp | AGAGTTCCAAGCCAGCCTGAGCTTCAAAGCAAGCTATTGTTGGAAAACAAAAACGCCATGGTGACTCAGTaGCTCAGCACTCTAGAACTT | + |
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Preference number: 2 (lower is better) Translates to: RVPSQPELQSKLLLENKNAMVTQ*LSTLEL Trigger: AAGTTCTAGAGTGCTGAGTCACTGAGTCACCATGGC...GTTTTTGTTTTCCAACAATAGCTTGCTTTGAAGCTCAGGCTGGCTTGGAACTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054483.14 ENSMUST00000171621.3 |
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| 3UTR-3UTR GCA 90 bp | AAAGCGACACTACCGTTCCACAGAAAGAAAATCAAGGAGCTATTTCCCAAGTCTATGGGGGTAACATCATaGAGAAAAGCAACAAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: KATLPFHRKKIKELFPKSMGVTS*RKATRV Trigger: CACCCTTGTTGCTTTTCTGCATGATGTTACCCCCAT...AGACTTGGGAAATAGCTCCTTGATTTTCTTTCTGTGGAACGGTAGTGTCGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| 3UTR-3UTR TCA 90 bp | AGAGTTCCAAGCCAGCCTGAGCTTCAAAGCAAGCTATTGTTGGAAAACAAAAACAACAAAAACAAAATATaGATGTGGCTAACTTCCCCC | + |
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Preference number: 2 (lower is better) Translates to: RVPSQPELQSKLLLENKNNKNKI*MWLTSP Trigger: GGGGGAAGTTAGCCACATTCATATTTTGTTTTTGTT...GTTTTTGTTTTCCAACAATAGCTTGCTTTGAAGCTCAGGCTGGCTTGGAACTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000054483.14 ENSMUST00000171621.3 |
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| 3UTR GCA 72 bp | TGGCTGCCACCAAGACAAAGCATGGGGGTAACATCATaGAGAAAAGCAACAAGGGTGACCTCATTACCCAGA | + |
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Preference number: 3 (lower is better) Translates to: WLPPRQSMGVTS*RKATRVTSLPR Trigger: TCTGGGTAATGAGGTCACCCTTGTTGCTTTTCTGCATGATGTTACCCCCATGCTTTGTCTTGGTGGCAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| 3UTR TCA 72 bp | CTAAACCTGAAAAACAAAGGCTGCTACGAAATGATGTaGCCGGGCCAAGAGATGGCTGCCACCAAGACAAAG | + |
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Preference number: 3 (lower is better) Translates to: LNLKNKGCYEMM*PGQEMAATKTK Trigger: CTTTGTCTTGGTGGCAGCCATCTCTTGGCCCGGTCACATCATTTCGTAGCAGCCTTTGTTTTTCAGGTTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| 3UTR-3UTR CAA 90 bp | CTGCCACCAAGACAAAGCATGGGGGTAACATCATGCAGAAAAGCAACAAGGGTGAGAGCCGAAACTCAGTaGACTAAGTTGATGATTAAC | + |
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Preference number: 3 (lower is better) Translates to: LPPRQSMGVTSCRKATRVRAETQ*TKLMIN Trigger: GTTAATCATCAACTTAGTCAACTGAGTTTCGGCTCT...CACCCTTGTTGCTTTTCTGCATGATGTTACCCCCATGCTTTGTCTTGGTGGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| 3UTR-3UTR CAA 90 bp | ACAGACACCAGTGAGCAATCTGCCCGAGCTCTAAACCTGAAAAACAAAGGCTGCAGAGCCGAAACTCAGTaGACTAAGTTGATGATTAAC | + |
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Preference number: 3 (lower is better) Translates to: TDTSEQSARALNLKNKGCRAETQ*TKLMIN Trigger: GTTAATCATCAACTTAGTCAACTGAGTTTCGGCTCT...GCAGCCTTTGTTTTTCAGGTTTAGAGCTCGGGCAGATTGCTCACTGGTGTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| 3UTR-3UTR CAA 90 bp | TCCACAGAAAGAAAATCAAGGAGCTATTTCCCAAGTCTTTCCATAAGGAAGCCAAGAGCCGAAACTCAGTaGACTAAGTTGATGATTAAC | + |
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Preference number: 3 (lower is better) Translates to: STERKSRSYFPSLSIRKPRAETQ*TKLMIN Trigger: GTTAATCATCAACTTAGTCAACTGAGTTTCGGCTCT...TGGCTTCCTTATGGAAAGACTTGGGAAATAGCTCCTTGATTTTCTTTCTGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR TCA 90 bp | GACCGGGCCAAGAGATGGCTGCCACCAAGACAAAGCATGGGGGTAACATCATGCTTCTGCAACAGGAACTaGTACTCTCCGAACCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: DRAKRWLPPRQSMGVTSCFCNRN*YSPNLS Trigger: GCTCAGGTTCGGAGAGTATCAGTTCCTGTTGCAGAA...GCATGATGTTACCCCCATGCTTTGTCTTGGTGGCAGCCATCTCTTGGCCCGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR TCA 90 bp | TGTGACCGGGCCAAGAGATGGCTGCCACCAAGACAAAGCATGGGGGTAACATCATCATCTGGAGACAAGTaGCCGTCTCCTCTGTATCAG | + |
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Preference number: 4 (lower is better) Translates to: CDRAKRWLPPRQSMGVTSSSGDK*PSPLYQ Trigger: CTGATACAGAGGAGACGGTCACTTGTCTCCAGATGA...TGATGTTACCCCCATGCTTTGTCTTGGTGGCAGCCATCTCTTGGCCCGGTCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR TCA 90 bp | TTGACATCCGACCCATGTGTCCTCATCCTTCAATGTGTCTCCAGTTGGACCCTCGCAGGTCCATTTTATTaGGGTAGCCGAGCTCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: LTSDPCVLILQCVSSWTLAGPFY*GSRAPG Trigger: ACCAGGAGCTCGGCTACCTCAATAAAATGGACCTGC...GAGGGTCCAACTGGAGACACATTGAAGGATGAGGACACATGGGTCGGATGTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR TCA 90 bp | TTGACATCCGACCCATGTGTCCTCATCCTTCAATGTGTCTCCAGTTGGACCCTCTTCTGCAACAGGAACTaGTACTCTCCGAACCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: LTSDPCVLILQCVSSWTLFCNRN*YSPNLS Trigger: GCTCAGGTTCGGAGAGTATCAGTTCCTGTTGCAGAA...GAGGGTCCAACTGGAGACACATTGAAGGATGAGGACACATGGGTCGGATGTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR TCA 90 bp | GACCGGGCCAAGAGATGGCTGCCACCAAGACAAAGCATGGGGGTAACATCATGCGAGAACTTCTGTGGGTaGAGTATGAAGAATACATCC | + |
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Preference number: 4 (lower is better) Translates to: DRAKRWLPPRQSMGVTSCENFCG*SMKNTS Trigger: GGATGTATTCTTCATACTTCACCCACAGAAGTTCTC...GCATGATGTTACCCCCATGCTTTGTCTTGGTGGCAGCCATCTCTTGGCCCGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR GCA 90 bp | GACCGGGCCAAGAGATGGCTGCCACCAAGACAAAGCATGGGGGTAACATCATGCGGCACATGTTGGAATTaGGTCCAAATTTCACCACTT | + |
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Preference number: 4 (lower is better) Translates to: DRAKRWLPPRQSMGVTSCGTCWN*VQISPL Trigger: AAGTGGTGAAATTTGGACGCAATTCCAACATGTGCC...GCATGATGTTACCCCCATGCTTTGTCTTGGTGGCAGCCATCTCTTGGCCCGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR TCA 90 bp | AACTTATTCCAGGACTCTAGTTCTACAAGCGCTAGCACGCCACAGACACCAGTGTCATCTGGAGACAAGTaGCCGTCTCCTCTGTATCAG | + |
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Preference number: 4 (lower is better) Translates to: NLFQDSSSTSASTPQTPVSSGDK*PSPLYQ Trigger: CTGATACAGAGGAGACGGTCACTTGTCTCCAGATGA...CACTGGTGTCTGTGGCGTGCTAGCGCTTGTAGAACTAGAGTCCTGGAATAAGTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR TCA 90 bp | GTAGGATGTCTCTTGACATCCGACCCATGTGTCCTCATCCTTCAATGTGTCTCCTTCTGCAACAGGAACTaGTACTCTCCGAACCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: VGCLLTSDPCVLILQCVSFCNRN*YSPNLS Trigger: GCTCAGGTTCGGAGAGTATCAGTTCCTGTTGCAGAA...GGAGACACATTGAAGGATGAGGACACATGGGTCGGATGTCAAGAGACATCCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR TCA 90 bp | ACAAAGCATGGGGGTAACATCATGCAGAAAAGCAACAAGGGTGACCTCATTACCGCAGGTCCATTTTATTaGGGTAGCCGAGCTCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: TKHGGNIMQKSNKGDLITAGPFY*GSRAPG Trigger: ACCAGGAGCTCGGCTACCTCAATAAAATGGACCTGC...GGTAATGAGGTCACCCTTGTTGCTTTTCTGCATGATGTTACCCCCATGCTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR CCA 90 bp | GACCGGGCCAAGAGATGGCTGCCACCAAGACAAAGCATGGGGGTAACATCATGCTATACTGGCACATGTTaGAATTGCGTCCAAATTTCA | + |
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Preference number: 4 (lower is better) Translates to: DRAKRWLPPRQSMGVTSCYTGTC*NCVQIS Trigger: TGAAATTTGGACGCAATTCCAACATGTGCCAGTATA...GCATGATGTTACCCCCATGCTTTGTCTTGGTGGCAGCCATCTCTTGGCCCGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR CCA 90 bp | TGTGACCGGGCCAAGAGATGGCTGCCACCAAGACAAAGCATGGGGGTAACATCAGAAGGAGAACTTCTGTaGGTGAAGTATGAAGAATAC | + |
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Preference number: 4 (lower is better) Translates to: CDRAKRWLPPRQSMGVTSEGELL*VKYEEY Trigger: GTATTCTTCATACTTCACCCACAGAAGTTCTCCTTC...TGATGTTACCCCCATGCTTTGTCTTGGTGGCAGCCATCTCTTGGCCCGGTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR TCA 90 bp | ACAAAGCATGGGGGTAACATCATGCAGAAAAGCAACAAGGGTGACCTCATTACCTCATCTGGAGACAAGTaGCCGTCTCCTCTGTATCAG | + |
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Preference number: 4 (lower is better) Translates to: TKHGGNIMQKSNKGDLITSSGDK*PSPLYQ Trigger: CTGATACAGAGGAGACGGTCACTTGTCTCCAGATGA...GGTAATGAGGTCACCCTTGTTGCTTTTCTGCATGATGTTACCCCCATGCTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR TCA 90 bp | ACAGACACCAGTGAGCAATCTGCCCGAGCTCTAAACCTGAAAAACAAAGGCTGCGGCTGTAAAACAAACTaGATTCGGGACACCTGTTTG | + |
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Preference number: 4 (lower is better) Translates to: TDTSEQSARALNLKNKGCGCKTN*IRDTCL Trigger: CAAACAGGTGTCCCGAATTCAGTTTGTTTTACAGCC...GCAGCCTTTGTTTTTCAGGTTTAGAGCTCGGGCAGATTGCTCACTGGTGTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR TCA 90 bp | GAAAGCGACACTACCGTTCCACAGAAAGAAAATCAAGGAGCTATTTCCCAAGTCGCAGGTCCATTTTATTaGGGTAGCCGAGCTCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: ESDTTVPQKENQGAISQVAGPFY*GSRAPG Trigger: ACCAGGAGCTCGGCTACCTCAATAAAATGGACCTGC...GACTTGGGAAATAGCTCCTTGATTTTCTTTCTGTGGAACGGTAGTGTCGCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR TCA 90 bp | TGTGACCGGGCCAAGAGATGGCTGCCACCAAGACAAAGCATGGGGGTAACATCATTGCAAGAGAGGTCTTaGAGACATGATAAATTGAGT | + |
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Preference number: 4 (lower is better) Translates to: CDRAKRWLPPRQSMGVTSLQERS*RHDKLS Trigger: ACTCAATTTATCATGTCTTCAAGACCTCTCTTGCAA...TGATGTTACCCCCATGCTTTGTCTTGGTGGCAGCCATCTCTTGGCCCGGTCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR TCA 90 bp | TTGACATCCGACCCATGTGTCCTCATCCTTCAATGTGTCTCCAGTTGGACCCTCGTTTTCATCCATTTCTaGAGGAGAACTTCTGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: LTSDPCVLILQCVSSWTLVFIHF*RRTSVG Trigger: ACCCACAGAAGTTCTCCTTCAGAAATGGATGAAAAC...GAGGGTCCAACTGGAGACACATTGAAGGATGAGGACACATGGGTCGGATGTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR TCA 90 bp | CTCGGAAGTAGGATGTCTCTTGACATCCGACCCATGTGTCCTCATCCTTCAATGGAGAACTTCTGTGGGTaGAGTATGAAGAATACATCC | + |
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Preference number: 4 (lower is better) Translates to: LGSRMSLDIRPMCPHPSMENFCG*SMKNTS Trigger: GGATGTATTCTTCATACTTCACCCACAGAAGTTCTC...CATTGAAGGATGAGGACACATGGGTCGGATGTCAAGAGACATCCTACTTCCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR TCA 90 bp | AACTTATTCCAGGACTCTAGTTCTACAAGCGCTAGCACGCCACAGACACCAGTGGAGAACTTCTGTGGGTaGAGTATGAAGAATACATCC | + |
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Preference number: 4 (lower is better) Translates to: NLFQDSSSTSASTPQTPVENFCG*SMKNTS Trigger: GGATGTATTCTTCATACTTCACCCACAGAAGTTCTC...CACTGGTGTCTGTGGCGTGCTAGCGCTTGTAGAACTAGAGTCCTGGAATAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR TCA 90 bp | AACTTATTCCAGGACTCTAGTTCTACAAGCGCTAGCACGCCACAGACACCAGTGGTTTTCATCCATTTCTaGAGGAGAACTTCTGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: NLFQDSSSTSASTPQTPVVFIHF*RRTSVG Trigger: ACCCACAGAAGTTCTCCTTCAGAAATGGATGAAAAC...CACTGGTGTCTGTGGCGTGCTAGCGCTTGTAGAACTAGAGTCCTGGAATAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR GCA 90 bp | GTAGGATGTCTCTTGACATCCGACCCATGTGTCCTCATCCTTCAATGTGTCTCCGGCACATGTTGGAATTaGGTCCAAATTTCACCACTT | + |
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Preference number: 4 (lower is better) Translates to: VGCLLTSDPCVLILQCVSGTCWN*VQISPL Trigger: AAGTGGTGAAATTTGGACGCAATTCCAACATGTGCC...GGAGACACATTGAAGGATGAGGACACATGGGTCGGATGTCAAGAGACATCCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR GCA 90 bp | AGTAGGATGTCTCTTGACATCCGACCCATGTGTCCTCATCCTTCAATGTGTCTCGGCCAGTTGTTTTCTTaGAAGAGAGGTCTTGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: SRMSLDIRPMCPHPSMCLGQLFS*KRGLED Trigger: GTCTTCAAGACCTCTCTTGCAAGAAAACAACTGGCC...GAGACACATTGAAGGATGAGGACACATGGGTCGGATGTCAAGAGACATCCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| 3UTR CAA 72 bp | TACGCTACACTCACAAACTCGGAAGTAGGATGTCTCTaGACATCCGACCCATGTGTCCTCATCCTTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: YATLTNSEVGCL*TSDPCVLILQC Trigger: ACATTGAAGGATGAGGACACATGGGTCGGATGTCAAGAGACATCCTACTTCCGAGTTTGTGAGTGTAGCGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR TCA 90 bp | ACAAAGCATGGGGGTAACATCATGCAGAAAAGCAACAAGGGTGACCTCATTACCGGCTGTAAAACAAACTaGATTCGGGACACCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TKHGGNIMQKSNKGDLITGCKTN*IRDTCL Trigger: CAAACAGGTGTCCCGAATTCAGTTTGTTTTACAGCC...GGTAATGAGGTCACCCTTGTTGCTTTTCTGCATGATGTTACCCCCATGCTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR TCA 90 bp | CTACCGTTCCACAGAAAGAAAATCAAGGAGCTATTTCCCAAGTCTTTCCATAAGGCAGGTCCATTTTATTaGGGTAGCCGAGCTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPFHRKKIKELFPKSFHKAGPFY*GSRAPG Trigger: ACCAGGAGCTCGGCTACCTCAATAAAATGGACCTGC...CTTATGGAAAGACTTGGGAAATAGCTCCTTGATTTTCTTTCTGTGGAACGGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR CCA 90 bp | ACAGACACCAGTGAGCAATCTGCCCGAGCTCTAAACCTGAAAAACAAAGGCTGCTATGGGATTCTGTGTTaGCCAGTTGTTTTCTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TDTSEQSARALNLKNKGCYGILC*PVVFLQ Trigger: TTGCAAGAAAACAACTGGCCAACACAGAATCCCATA...GCAGCCTTTGTTTTTCAGGTTTAGAGCTCGGGCAGATTGCTCACTGGTGTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR CCA 90 bp | GTAGGATGTCTCTTGACATCCGACCCATGTGTCCTCATCCTTCAATGTGTCTCCGAAGGAGAACTTCTGTaGGTGAAGTATGAAGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: VGCLLTSDPCVLILQCVSEGELL*VKYEEY Trigger: GTATTCTTCATACTTCACCCACAGAAGTTCTCCTTC...GGAGACACATTGAAGGATGAGGACACATGGGTCGGATGTCAAGAGACATCCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR TCA 90 bp | CTACCGTTCCACAGAAAGAAAATCAAGGAGCTATTTCCCAAGTCTTTCCATAAGTTCTGCAACAGGAACTaGTACTCTCCGAACCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPFHRKKIKELFPKSFHKFCNRN*YSPNLS Trigger: GCTCAGGTTCGGAGAGTATCAGTTCCTGTTGCAGAA...CTTATGGAAAGACTTGGGAAATAGCTCCTTGATTTTCTTTCTGTGGAACGGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR TCA 90 bp | ACAGACACCAGTGAGCAATCTGCCCGAGCTCTAAACCTGAAAAACAAAGGCTGCGAAGACATGATAAATTaGGTCTCAAAAGATTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: TDTSEQSARALNLKNKGCEDMIN*VSKDST Trigger: GGTGGAATCTTTTGAGACTCAATTTATCATGTCTTC...GCAGCCTTTGTTTTTCAGGTTTAGAGCTCGGGCAGATTGCTCACTGGTGTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR TCA 90 bp | CTCGGAAGTAGGATGTCTCTTGACATCCGACCCATGTGTCCTCATCCTTCAATGGAAGACATGATAAATTaGGTCTCAAAAGATTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LGSRMSLDIRPMCPHPSMEDMIN*VSKDST Trigger: GGTGGAATCTTTTGAGACTCAATTTATCATGTCTTC...CATTGAAGGATGAGGACACATGGGTCGGATGTCAAGAGACATCCTACTTCCGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR TCA 90 bp | CTGCCACCAAGACAAAGCATGGGGGTAACATCATGCAGAAAAGCAACAAGGGTGTTGCAAGAGAGGTCTTaGAGACATGATAAATTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPPRQSMGVTSCRKATRVLQERS*RHDKLS Trigger: ACTCAATTTATCATGTCTTCAAGACCTCTCTTGCAA...CACCCTTGTTGCTTTTCTGCATGATGTTACCCCCATGCTTTGTCTTGGTGGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR TCA 90 bp | CACGCCACAGACACCAGTGAGCAATCTGCCCGAGCTCTAAACCTGAAAAACAAATTGCAAGAGAGGTCTTaGAGACATGATAAATTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HATDTSEQSARALNLKNKLQERS*RHDKLS Trigger: ACTCAATTTATCATGTCTTCAAGACCTCTCTTGCAA...TTTGTTTTTCAGGTTTAGAGCTCGGGCAGATTGCTCACTGGTGTCTGTGGCGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR CCA 90 bp | ACAGACACCAGTGAGCAATCTGCCCGAGCTCTAAACCTGAAAAACAAAGGCTGCATTTCACCACTTCAATaGAAGGAAACTTCTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TDTSEQSARALNLKNKGCISPLQ*KETSLC Trigger: GCAAAGAGAAGTTTCCTTCCATTGAAGTGGTGAAAT...GCAGCCTTTGTTTTTCAGGTTTAGAGCTCGGGCAGATTGCTCACTGGTGTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR CCA 90 bp | CACGCCACAGACACCAGTGAGCAATCTGCCCGAGCTCTAAACCTGAAAAACAAATATACTGGCACATGTTaGAATTGCGTCCAAATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HATDTSEQSARALNLKNKYTGTC*NCVQIS Trigger: TGAAATTTGGACGCAATTCCAACATGTGCCAGTATA...TTTGTTTTTCAGGTTTAGAGCTCGGGCAGATTGCTCACTGGTGTCTGTGGCGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR TCA 90 bp | AGACAAAGCATGGGGGTAACATCATGCAGAAAAGCAACAAGGGTGACCTCATTAGTTTTCATCCATTTCTaGAGGAGAACTTCTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RQSMGVTSCRKATRVTSLVFIHF*RRTSVG Trigger: ACCCACAGAAGTTCTCCTTCAGAAATGGATGAAAAC...TAATGAGGTCACCCTTGTTGCTTTTCTGCATGATGTTACCCCCATGCTTTGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR GCA 90 bp | AAAGCGACACTACCGTTCCACAGAAAGAAAATCAAGGAGCTATTTCCCAAGTCTGGCCAGTTGTTTTCTTaGAAGAGAGGTCTTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KATLPFHRKKIKELFPKSGQLFS*KRGLED Trigger: GTCTTCAAGACCTCTCTTGCAAGAAAACAACTGGCC...AGACTTGGGAAATAGCTCCTTGATTTTCTTTCTGTGGAACGGTAGTGTCGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR CCA 90 bp | AGTAGGATGTCTCTTGACATCCGACCCATGTGTCCTCATCCTTCAATGTGTCTCATTTCACCACTTCAATaGAAGGAAACTTCTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRMSLDIRPMCPHPSMCLISPLQ*KETSLC Trigger: GCAAAGAGAAGTTTCCTTCCATTGAAGTGGTGAAAT...GAGACACATTGAAGGATGAGGACACATGGGTCGGATGTCAAGAGACATCCTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR CCA 90 bp | CTCGGAAGTAGGATGTCTCTTGACATCCGACCCATGTGTCCTCATCCTTCAATGTGTCTACCATCAAACTaGTTTTCTTGCTCATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGSRMSLDIRPMCPHPSMCLPSN*FSCSCF Trigger: AAAACATGAGCAAGAAAACCAGTTTGATGGTAGACA...CATTGAAGGATGAGGACACATGGGTCGGATGTCAAGAGACATCCTACTTCCGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR CCA 90 bp | GTAGGATGTCTCTTGACATCCGACCCATGTGTCCTCATCCTTCAATGTGTCTCCTGTCTACCATCAAACTaGTTTTCTTGCTCATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VGCLLTSDPCVLILQCVSCLPSN*FSCSCF Trigger: AAAACATGAGCAAGAAAACCAGTTTGATGGTAGACA...GGAGACACATTGAAGGATGAGGACACATGGGTCGGATGTCAAGAGACATCCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR CCA 90 bp | CTGCCACCAAGACAAAGCATGGGGGTAACATCATGCAGAAAAGCAACAAGGGTGTGTCTACCATCAAACTaGTTTTCTTGCTCATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPPRQSMGVTSCRKATRVCLPSN*FSCSCF Trigger: AAAACATGAGCAAGAAAACCAGTTTGATGGTAGACA...CACCCTTGTTGCTTTTCTGCATGATGTTACCCCCATGCTTTGTCTTGGTGGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR CCA 90 bp | CAGAAATACAGTTACATTAAGCTAGGCACAGCATTCAGGGGGCCGATGTATGAGTATGGGATTCTGTGTTaGCCAGTTGTTTTCTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QKYSYIKLGTAFRGPMYEYGILC*PVVFLQ Trigger: TTGCAAGAAAACAACTGGCCAACACAGAATCCCATA...CTCATACATCGGCCCCCTGAATGCTGTGCCTAGCTTAATGTAACTGTATTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054483.14 ENSMUST00000171621.3 |
||
| CDS-3UTR TCA 90 bp | ACAAAGCATGGGGGTAACATCATGCAGAAAAGCAACAAGGGTGACCTCATTACCGAAGACATGATAAATTaGGTCTCAAAAGATTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: TKHGGNIMQKSNKGDLITEDMIN*VSKDST Trigger: GGTGGAATCTTTTGAGACTCAATTTATCATGTCTTC...GGTAATGAGGTCACCCTTGTTGCTTTTCTGCATGATGTTACCCCCATGCTTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR TCA 90 bp | AAGCGACACTACCGTTCCACAGAAAGAAAATCAAGGAGCTATTTCCCAAGTCTTGTTTTCATCCATTTCTaGAGGAGAACTTCTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KRHYRSTERKSRSYFPSLVFIHF*RRTSVG Trigger: ACCCACAGAAGTTCTCCTTCAGAAATGGATGAAAAC...AAGACTTGGGAAATAGCTCCTTGATTTTCTTTCTGTGGAACGGTAGTGTCGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR CCA 90 bp | AGACAAAGCATGGGGGTAACATCATGCAGAAAAGCAACAAGGGTGACCTCATTATATGGGATTCTGTGTTaGCCAGTTGTTTTCTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RQSMGVTSCRKATRVTSLYGILC*PVVFLQ Trigger: TTGCAAGAAAACAACTGGCCAACACAGAATCCCATA...TAATGAGGTCACCCTTGTTGCTTTTCTGCATGATGTTACCCCCATGCTTTGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR TCA 90 bp | CTACCGTTCCACAGAAAGAAAATCAAGGAGCTATTTCCCAAGTCTTTCCATAAGGAGAACTTCTGTGGGTaGAGTATGAAGAATACATCC | + |
|
Preference number: 4 (lower is better) Translates to: LPFHRKKIKELFPKSFHKENFCG*SMKNTS Trigger: GGATGTATTCTTCATACTTCACCCACAGAAGTTCTC...CTTATGGAAAGACTTGGGAAATAGCTCCTTGATTTTCTTTCTGTGGAACGGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR GCA 90 bp | CTACCGTTCCACAGAAAGAAAATCAAGGAGCTATTTCCCAAGTCTTTCCATAAGGGCACATGTTGGAATTaGGTCCAAATTTCACCACTT | + |
|
Preference number: 4 (lower is better) Translates to: LPFHRKKIKELFPKSFHKGTCWN*VQISPL Trigger: AAGTGGTGAAATTTGGACGCAATTCCAACATGTGCC...CTTATGGAAAGACTTGGGAAATAGCTCCTTGATTTTCTTTCTGTGGAACGGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR CCA 90 bp | AAGCGACACTACCGTTCCACAGAAAGAAAATCAAGGAGCTATTTCCCAAGTCTTGAAGGAGAACTTCTGTaGGTGAAGTATGAAGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: KRHYRSTERKSRSYFPSLEGELL*VKYEEY Trigger: GTATTCTTCATACTTCACCCACAGAAGTTCTCCTTC...AAGACTTGGGAAATAGCTCCTTGATTTTCTTTCTGTGGAACGGTAGTGTCGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR CCA 90 bp | CTACCGTTCCACAGAAAGAAAATCAAGGAGCTATTTCCCAAGTCTTTCCATAAGGAAGGAGAACTTCTGTaGGTGAAGTATGAAGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: LPFHRKKIKELFPKSFHKEGELL*VKYEEY Trigger: GTATTCTTCATACTTCACCCACAGAAGTTCTCCTTC...CTTATGGAAAGACTTGGGAAATAGCTCCTTGATTTTCTTTCTGTGGAACGGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR TCA 90 bp | TCCACAGAAAGAAAATCAAGGAGCTATTTCCCAAGTCTTTCCATAAGGAAGCCAGAAGACATGATAAATTaGGTCTCAAAAGATTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: STERKSRSYFPSLSIRKPEDMIN*VSKDST Trigger: GGTGGAATCTTTTGAGACTCAATTTATCATGTCTTC...TGGCTTCCTTATGGAAAGACTTGGGAAATAGCTCCTTGATTTTCTTTCTGTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR TCA 90 bp | CTACCGTTCCACAGAAAGAAAATCAAGGAGCTATTTCCCAAGTCTTTCCATAAGTTGCAAGAGAGGTCTTaGAGACATGATAAATTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPFHRKKIKELFPKSFHKLQERS*RHDKLS Trigger: ACTCAATTTATCATGTCTTCAAGACCTCTCTTGCAA...CTTATGGAAAGACTTGGGAAATAGCTCCTTGATTTTCTTTCTGTGGAACGGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR CCA 90 bp | TCCACAGAAAGAAAATCAAGGAGCTATTTCCCAAGTCTTTCCATAAGGAAGCCAATTTCACCACTTCAATaGAAGGAAACTTCTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: STERKSRSYFPSLSIRKPISPLQ*KETSLC Trigger: GCAAAGAGAAGTTTCCTTCCATTGAAGTGGTGAAAT...TGGCTTCCTTATGGAAAGACTTGGGAAATAGCTCCTTGATTTTCTTTCTGTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR CCA 90 bp | AAAGCGACACTACCGTTCCACAGAAAGAAAATCAAGGAGCTATTTCCCAAGTCTTGTCTACCATCAAACTaGTTTTCTTGCTCATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KATLPFHRKKIKELFPKSCLPSN*FSCSCF Trigger: AAAACATGAGCAAGAAAACCAGTTTGATGGTAGACA...AGACTTGGGAAATAGCTCCTTGATTTTCTTTCTGTGGAACGGTAGTGTCGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR CAA 90 bp | GACCGGGCCAAGAGATGGCTGCCACCAAGACAAAGCATGGGGGTAACATCATGCGTATGGGATTCTGTGTaGGCCAGTTGTTTTCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: DRAKRWLPPRQSMGVTSCVWDSV*ASCFLA Trigger: TGCAAGAAAACAACTGGCCAACACAGAATCCCATAC...GCATGATGTTACCCCCATGCTTTGTCTTGGTGGCAGCCATCTCTTGGCCCGGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR CAA 90 bp | TGTGACCGGGCCAAGAGATGGCTGCCACCAAGACAAAGCATGGGGGTAACATCATTCTGTGTTGGCCAGTaGTTTTCTTGCAAGAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CDRAKRWLPPRQSMGVTSFCVGQ*FSCKRG Trigger: ACCTCTCTTGCAAGAAAACAACTGGCCAACACAGAA...TGATGTTACCCCCATGCTTTGTCTTGGTGGCAGCCATCTCTTGGCCCGGTCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR CAA 90 bp | GTAGGATGTCTCTTGACATCCGACCCATGTGTCCTCATCCTTCAATGTGTCTCCGAGAGAACGGAGCTGTaGAACTGTTTAAACGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VGCLLTSDPCVLILQCVSERTEL*NCLNGC Trigger: ACAGCCGTTTAAACAGTTCAACAGCTCCGTTCTCTC...GGAGACACATTGAAGGATGAGGACACATGGGTCGGATGTCAAGAGACATCCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR CAA 90 bp | TTGACATCCGACCCATGTGTCCTCATCCTTCAATGTGTCTCCAGTTGGACCCTCGTATGGGATTCTGTGTaGGCCAGTTGTTTTCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LTSDPCVLILQCVSSWTLVWDSV*ASCFLA Trigger: TGCAAGAAAACAACTGGCCAACACAGAATCCCATAC...GAGGGTCCAACTGGAGACACATTGAAGGATGAGGACACATGGGTCGGATGTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR CAA 90 bp | TTGACATCCGACCCATGTGTCCTCATCCTTCAATGTGTCTCCAGTTGGACCCTCAAATATCCCACTTTGTaGGCCAGGATGGTAAATGGT | + |
|
Preference number: 5 (lower is better) Translates to: LTSDPCVLILQCVSSWTLKYPTL*ARMVNG Trigger: ACCATTTACCATCCTGGCCAACAAAGTGGGATATTT...GAGGGTCCAACTGGAGACACATTGAAGGATGAGGACACATGGGTCGGATGTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR CAA 90 bp | AACTTATTCCAGGACTCTAGTTCTACAAGCGCTAGCACGCCACAGACACCAGTGGTATGGGATTCTGTGTaGGCCAGTTGTTTTCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: NLFQDSSSTSASTPQTPVVWDSV*ASCFLA Trigger: TGCAAGAAAACAACTGGCCAACACAGAATCCCATAC...CACTGGTGTCTGTGGCGTGCTAGCGCTTGTAGAACTAGAGTCCTGGAATAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR CAA 90 bp | CACGCCACAGACACCAGTGAGCAATCTGCCCGAGCTCTAAACCTGAAAAACAAAAAATATCCCACTTTGTaGGCCAGGATGGTAAATGGT | + |
|
Preference number: 5 (lower is better) Translates to: HATDTSEQSARALNLKNKKYPTL*ARMVNG Trigger: ACCATTTACCATCCTGGCCAACAAAGTGGGATATTT...TTTGTTTTTCAGGTTTAGAGCTCGGGCAGATTGCTCACTGGTGTCTGTGGCGTG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR CAA 90 bp | AGTAGGATGTCTCTTGACATCCGACCCATGTGTCCTCATCCTTCAATGTGTCTCTTCTGTGTTGGCCAGTaGTTTTCTTGCAAGAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SRMSLDIRPMCPHPSMCLFCVGQ*FSCKRG Trigger: ACCTCTCTTGCAAGAAAACAACTGGCCAACACAGAA...GAGACACATTGAAGGATGAGGACACATGGGTCGGATGTCAAGAGACATCCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR CAA 90 bp | AGACAAAGCATGGGGGTAACATCATGCAGAAAAGCAACAAGGGTGACCTCATTAGAGAGAACGGAGCTGTaGAACTGTTTAAACGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RQSMGVTSCRKATRVTSLERTEL*NCLNGC Trigger: ACAGCCGTTTAAACAGTTCAACAGCTCCGTTCTCTC...TAATGAGGTCACCCTTGTTGCTTTTCTGCATGATGTTACCCCCATGCTTTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
||
| CDS-3UTR CAA 90 bp | ACAAAGCATGGGGGTAACATCATGCAGAAAAGCAACAAGGGTGACCTCATTACCTTCTGTGTTGGCCAGTaGTTTTCTTGCAAGAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: TKHGGNIMQKSNKGDLITFCVGQ*FSCKRG Trigger: ACCTCTCTTGCAAGAAAACAACTGGCCAACACAGAA...GGTAATGAGGTCACCCTTGTTGCTTTTCTGCATGATGTTACCCCCATGCTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR CAA 90 bp | CAGAAATACAGTTACATTAAGCTAGGCACAGCATTCAGGGGGCCGATGTATGAGGTATGGGATTCTGTGTaGGCCAGTTGTTTTCTTGCA | + |
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Preference number: 5 (lower is better) Translates to: QKYSYIKLGTAFRGPMYEVWDSV*ASCFLA Trigger: TGCAAGAAAACAACTGGCCAACACAGAATCCCATAC...CTCATACATCGGCCCCCTGAATGCTGTGCCTAGCTTAATGTAACTGTATTTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054483.14 ENSMUST00000171621.3 |
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| CDS TCA 90 bp | GGCCAGTTGTTTTCTTGCAAGAGAGGTCTTGAAGACATGATAAATTaGGTCTCAAAAGATTCCACCGACTCTCCGTCTTCCTTCTGCAAC | + |
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Preference number: 5 (lower is better) Translates to: GQLFSCKRGLEDMIN*VSKDSTDSPSSFCN Trigger: GTTGCAGAAGGAAGACGGAGAGTCGGTGGAATCTTTTGAGACTCAATTTATCATGTCTTCAAGACCTCTCTTGCAAGAAAACAACTGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS GCA 90 bp | GGGACACCTGTTTGTCCTGAAACGTATACTGGCACATGTTGGAATTaGGTCCAAATTTCACCACTTCAATGGAAGGAAACTTCTCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: GTPVCPETYTGTCWN*VQISPLQWKETSLC Trigger: GCAAAGAGAAGTTTCCTTCCATTGAAGTGGTGAAATTTGGACGCAATTCCAACATGTGCCAGTATACGTTTCAGGACAAACAGGTGTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR CAA 90 bp | CAGAAATACAGTTACATTAAGCTAGGCACAGCATTCAGGGGGCCGATGTATGAGAAATATCCCACTTTGTaGGCCAGGATGGTAAATGGT | + |
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Preference number: 5 (lower is better) Translates to: QKYSYIKLGTAFRGPMYEKYPTL*ARMVNG Trigger: ACCATTTACCATCCTGGCCAACAAAGTGGGATATTT...CTCATACATCGGCCCCCTGAATGCTGTGCCTAGCTTAATGTAACTGTATTTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054483.14 ENSMUST00000171621.3 |
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| CDS-3UTR CAA 90 bp | GAAAGCGACACTACCGTTCCACAGAAAGAAAATCAAGGAGCTATTTCCCAAGTCTGGCACATGTTGGAATaGCGTCCAAATTTCACCACT | + |
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Preference number: 5 (lower is better) Translates to: ESDTTVPQKENQGAISQVWHMLE*RPNFTT Trigger: AGTGGTGAAATTTGGACGCAATTCCAACATGTGCCA...GACTTGGGAAATAGCTCCTTGATTTTCTTTCTGTGGAACGGTAGTGTCGCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR CAA 90 bp | AGACAAAGCATGGGGGTAACATCATGCAGAAAAGCAACAAGGGTGACCTCATTATTCTGTGTTGGCCAGTaGTTTTCTTGCAAGAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: RQSMGVTSCRKATRVTSLFCVGQ*FSCKRG Trigger: ACCTCTCTTGCAAGAAAACAACTGGCCAACACAGAA...TAATGAGGTCACCCTTGTTGCTTTTCTGCATGATGTTACCCCCATGCTTTGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS CCA 90 bp | GAATTCGGGACACCTGTTTGTCCTGAAACGTATACTGGCACATGTTaGAATTGCGTCCAAATTTCACCACTTCAATGGAAGGAAACTTCT | + |
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Preference number: 5 (lower is better) Translates to: EFGTPVCPETYTGTC*NCVQISPLQWKETS Trigger: AGAAGTTTCCTTCCATTGAAGTGGTGAAATTTGGACGCAATTCCAACATGTGCCAGTATACGTTTCAGGACAAACAGGTGTCCCGAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR CAA 90 bp | CTACCGTTCCACAGAAAGAAAATCAAGGAGCTATTTCCCAAGTCTTTCCATAAGGAGAGAACGGAGCTGTaGAACTGTTTAAACGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: LPFHRKKIKELFPKSFHKERTEL*NCLNGC Trigger: ACAGCCGTTTAAACAGTTCAACAGCTCCGTTCTCTC...CTTATGGAAAGACTTGGGAAATAGCTCCTTGATTTTCTTTCTGTGGAACGGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS-3UTR CAA 90 bp | AAAGCGACACTACCGTTCCACAGAAAGAAAATCAAGGAGCTATTTCCCAAGTCTAAATATCCCACTTTGTaGGCCAGGATGGTAAATGGT | + |
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Preference number: 5 (lower is better) Translates to: KATLPFHRKKIKELFPKSKYPTL*ARMVNG Trigger: ACCATTTACCATCCTGGCCAACAAAGTGGGATATTT...AGACTTGGGAAATAGCTCCTTGATTTTCTTTCTGTGGAACGGTAGTGTCGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS TCA 90 bp | CACCACTTCAATGGAAGGAAACTTCTCTTTGCTGCAAAACCTTATTaGTTTAAATATCCCACTTTGTTGGCCAGGATGGTAAATGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: HHFNGRKLLFAAKPY*FKYPTLLARMVNGH Trigger: ATGACCATTTACCATCCTGGCCAACAAAGTGGGATATTTAAATCAATAAGGTTTTGCAGCAAAGAGAAGTTTCCTTCCATTGAAGTGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS TCA 72 bp | GTTGGCCAGGATGGTAAATGGTCATCTGGAGACAAGTaGCCGTCTCCTCTGTATCAGCGTCTTCAAAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: VGQDGKWSSGDK*PSPLYQRLQRW Trigger: CCACCTTTGAAGACGCTGATACAGAGGAGACGGTCACTTGTCTCCAGATGACCATTTACCATCCTGGCCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS CAA 72 bp | ATCCCATCCTCTGGTATGGGATTCTGTGTTGGCCAGTaGTTTTCTTGCAAGAGAGGTCTTGAAGACATGATA | + |
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Preference number: 6 (lower is better) Translates to: IPSSGMGFCVGQ*FSCKRGLEDMI Trigger: TATCATGTCTTCAAGACCTCTCTTGCAAGAAAACAACTGGCCAACACAGAATCCCATACCAGAGGATGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS CAA 72 bp | AAGAATACATCCCATCCTCTGGTATGGGATTCTGTGTaGGCCAGTTGTTTTCTTGCAAGAGAGGTCTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: KNTSHPLVWDSV*ASCFLAREVLK Trigger: CTTCAAGACCTCTCTTGCAAGAAAACAACTGGCCAACACAGAATCCCATACCAGAGGATGGGATGTATTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS CCA 72 bp | ACACCTGTTTGTCCTGAAACGTATACTGGCACATGTTaGAATTGCGTCCAAATTTCACCACTTCAATGGAAG | + |
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Preference number: 6 (lower is better) Translates to: TPVCPETYTGTC*NCVQISPLQWK Trigger: CTTCCATTGAAGTGGTGAAATTTGGACGCAATTCCAACATGTGCCAGTATACGTTTCAGGACAAACAGGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS TCA 72 bp | TTTTCTTGCAAGAGAGGTCTTGAAGACATGATAAATTaGGTCTCAAAAGATTCCACCGACTCTCCGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: FSCKRGLEDMIN*VSKDSTDSPSS Trigger: GGAAGACGGAGAGTCGGTGGAATCTTTTGAGACTCAATTTATCATGTCTTCAAGACCTCTCTTGCAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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| CDS CAA 90 bp | GAATTGCGTCCAAATTTCACCACTTCAATGGAAGGAAACTTCTCTTaGCTGCAAAACCTTATTGATTTAAATATCCCACTTTGTTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: ELRPNFTTSMEGNFS*LQNLIDLNIPLCWP Trigger: TGGCCAACAAAGTGGGATATTTAAATCAATAAGGTTTTGCAGCAAAGAGAAGTTTCCTTCCATTGAAGTGGTGAAATTTGGACGCAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054483.14 ENSMUST00000163775.6 ENSMUST00000164447.3 ENSMUST00000171621.3 |
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