Pregenerated sensors for TIE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033191Ensembl transcript IDs: ENSMUST00000047421.6, ENSMUST00000184261.8
Found 321 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGCAGGTGGCAGAGACGGAACCTACCACAGCCAGGACCAGCTGCTaGTCCAGGCCTTCTTCAGCTGCCCGGCTTTCTCGGACTGGGCCC | + |
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Preference number: 1 (lower is better) Translates to: RQVAETEPTTARTSC*SRPSSAARLSRTGP Trigger: GGGCCCAGTCCGAGAAAGCCGGGCAGCTGAAGAAGGCCTGGATCAGCAGCTGGTCCTGGCTGTGGTAGGTTCCGTCTCTGCCACCTGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR TCA 90 bp | TGCCGTTGGCTGCATCACTGGCAAAGCGCAGCAGCTGCCGAGAGCTaGGTGTGGAGGCCGTCCCATGCTCTCGAGCAAAAGCTGGATCAG | + |
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Preference number: 1 (lower is better) Translates to: CRWLHHWQSAAAAES*VWRPSHALEQKLDQ Trigger: CTGATCCAGCTTTTGCTCGAGAGCATGGGACGGCCTCCACACTCAGCTCTCGGCAGCTGCTGCGCTTTGCCAGTGATGCAGCCAACGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR TCA 90 bp | TTGGATATAGGCCCAGACGGAGCCTCGGGATGCTGCCACATGAGTTaGATCTCAGAGTCTGAGAGGGCCTGGGCATGGAGGTGGCGGGGA | + |
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Preference number: 1 (lower is better) Translates to: LDIGPDGASGCCHMS*ISESERAWAWRWRG Trigger: TCCCCGCCACCTCCATGCCCAGGCCCTCTCAGACTCTGAGATTCAACTCATGTGGCAGCATCCCGAGGCTCCGTCTGGGCCTATATCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR GCA 90 bp | GCAAAGCGCAGCAGCTGCCGAGAGCTGAGTGTGGAGGCCGTCCCATaGTCTCGAGCAAAAGCTGGATCAGTCTCCAGGACCCTGCTCTTT | + |
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Preference number: 1 (lower is better) Translates to: AKRSSCRELSVEAVP*SRAKAGSVSRTLLF Trigger: AAAGAGCAGGGTCCTGGAGACTGATCCAGCTTTTGCTCGAGAGCATGGGACGGCCTCCACACTCAGCTCTCGGCAGCTGCTGCGCTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR GCA 90 bp | AGGTACTGCATGCCGTTGGCTGCATCACTGGCAAAGCGCAGCAGCTaGCGAGAGCTGAGTGTGGAGGCCGTCCCATGCTCTCGAGCAAAA | + |
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Preference number: 1 (lower is better) Translates to: RYCMPLAASLAKRSS*RELSVEAVPCSRAK Trigger: TTTTGCTCGAGAGCATGGGACGGCCTCCACACTCAGCTCTCGGCAGCTGCTGCGCTTTGCCAGTGATGCAGCCAACGGCATGCAGTACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR GCA 90 bp | GCAGCCAGGTCCCTGCTTCTCACTAAGGTACTGCATGCCGTTGGCTaGATCACTGGCAAAGCGCAGCAGCTGCCGAGAGCTGAGTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: AARSLLLTKVLHAVG*ITGKAQQLPRAECG Trigger: TCCACACTCAGCTCTCGGCAGCTGCTGCGCTTTGCCAGTGATGCAGCCAACGGCATGCAGTACCTTAGTGAGAAGCAGGGACCTGGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR CCA 90 bp | TTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACAGGTaGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCTGGTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: LRQLGSEVRRVQSHR*KQFAPASRARGWWG Trigger: CCCCCACCAGCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| 3UTR GCA 90 bp | CCTCACTCTGCAGCCCATTGCCCAGAGTGGCCTCTTCTACTGTATTaGTCCAGTCGCCAAGACCCTGCACACTGGCCCGCACACGGAAAA | + |
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Preference number: 1 (lower is better) Translates to: PHSAAHCPEWPLLLY*SSRQDPAHWPAHGK Trigger: TTTTCCGTGTGCGGGCCAGTGTGCAGGGTCTTGGCGACTGGAGCAATACAGTAGAAGAGGCCACTCTGGGCAATGGGCTGCAGAGTGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR TCA 90 bp | GGGCAGCCTAGGCCTCCTCAGCTGTGGCATCGATGCCCGCATAGGTaGAGTTCTCAAACAGCGACATGTTCACGTAGGCCTTCCTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: GQPRPPQLWHRCPHR*SSQTATCSRRPSWL Trigger: AAGCCAGGAAGGCCTACGTGAACATGTCGCTGTTTGAGAACTTCACCTATGCGGGCATCGATGCCACAGCTGAGGAGGCCTAGGCTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR GCA 90 bp | CCCAGAGTGGCCTCTTCTACTGTATTGCTCCAGTCGCCAAGACCCTaGACACTGGCCCGCACACGGAAAAGATATCGTGTGCTAGCATTG | + |
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Preference number: 1 (lower is better) Translates to: PRVASSTVLLQSPRP*TLARTRKRYRVLAL Trigger: CAATGCTAGCACACGATATCTTTTCCGTGTGCGGGCCAGTGTGCAGGGTCTTGGCGACTGGAGCAATACAGTAGAAGAGGCCACTCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR CCA 90 bp | AGTGACCCATGTCCTCCTGGTATCTTCTATCTTCCCCATTCATCCTaGGTGCTCTCCTCGTCCACCCAGTCTCTTGTAACCTCCCGTCAT | + |
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Preference number: 1 (lower is better) Translates to: SDPCPPGIFYLPHSS*VLSSSTQSLVTSRH Trigger: ATGACGGGAGGTTACAAGAGACTGGGTGGACGAGGAGAGCACCCAGGATGAATGGGGAAGATAGAAGATACCAGGAGGACATGGGTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR CCA 90 bp | CTAACTGGACTCATCTCCATCCCCAAGGTACCTCCACCTCCCATATaGGAACCCTCCCAAGAGGGTTTCCCACTTCTCATAGTCACCTTG | + |
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Preference number: 1 (lower is better) Translates to: LTGLISIPKVPPPPI*EPSQEGFPLLIVTL Trigger: CAAGGTGACTATGAGAAGTGGGAAACCCTCTTGGGAGGGTTCCCATATGGGAGGTGGAGGTACCTTGGGGATGGAGATGAGTCCAGTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR TCA 90 bp | ACGAGTCACAATTTCCTCACGTATCCTCACCCCACATGCTCTAAGTaGCCCATGTCCTCCTGGTATCTTCTATCTTCCCCATTCATCCTG | + |
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Preference number: 1 (lower is better) Translates to: TSHNFLTYPHPTCSK*PMSSWYLLSSPFIL Trigger: CAGGATGAATGGGGAAGATAGAAGATACCAGGAGGACATGGGTCACTTAGAGCATGTGGGGTGAGGATACGTGAGGAAATTGTGACTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR-3UTR TCA 90 bp | CCATCCAACGCACAGGGAGACGGCCCATTGTCTTCTTCACATACACCTCCTCCCGCAGCTGCCGAGAGCTaGGTGTGGAGGCCGTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: PSNAQGDGPLSSSHTPPPAAAES*VWRPSH Trigger: ATGGGACGGCCTCCACACTCAGCTCTCGGCAGCTGC...GGGAGGAGGTGTATGTGAAGAAGACAATGGGCCGTCTCCCTGTGCGTTGGATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR CAA 90 bp | CCCTCACTCTGCAGCCCATTGCCCAGAGTGGCCTCTTCTACTGTATaGCTCCAGTCGCCAAGACCCTGCACACTGGCCCGCACACGGAAA | + |
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Preference number: 2 (lower is better) Translates to: PSLCSPLPRVASSTV*LQSPRPCTLARTRK Trigger: TTTCCGTGTGCGGGCCAGTGTGCAGGGTCTTGGCGACTGGAGCAATACAGTAGAAGAGGCCACTCTGGGCAATGGGCTGCAGAGTGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR CAA 90 bp | TTCGGGCAGCCAGGTCCCTGCTTCTCACTAAGGTACTGCATGCCGTaGGCTGCATCACTGGCAAAGCGCAGCAGCTGCCGAGAGCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: FGQPGPCFSLRYCMP*AASLAKRSSCRELS Trigger: ACTCAGCTCTCGGCAGCTGCTGCGCTTTGCCAGTGATGCAGCCAACGGCATGCAGTACCTTAGTGAGAAGCAGGGACCTGGCTGCCCGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGGTGGCAGAGACGGAACCTACCACAGCCAGGACCAGCTGCTGATCCAGGCCTTTCTTGAGACAGCTTaGGTCAGAGGTGAGAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: AGGRDGTYHSQDQLLIQAFLETA*VRGEKG Trigger: ACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAA...GGCCTGGATCAGCAGCTGGTCCTGGCTGTGGTAGGTTCCGTCTCTGCCACCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCACCTGAATCTCCACGATGTACTTGGATATAGGCCCAGACGGAGCCTCGGGGTGGAGGATCAGAAGTaGGGTTTGGGTTTGGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: GHLNLHDVLGYRPRRSLGVEDQK*GLGLGS Trigger: GCTCCCCAAACCCAAACCCCACTTCTGATCCTCCAC...CCCGAGGCTCCGTCTGGGCCTATATCCAAGTACATCGTGGAGATTCAGGTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR-3UTR CCA 90 bp | ACTAAGGTACTGCATGCCGTTGGCTGCATCACTGGCAAAGCGCAGCAGCTGCCGCTCGTTGCCCCTAACTaGACTCATCTCCATCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: TKVLHAVGCITGKAQQLPLVAPN*THLHPQ Trigger: TTGGGGATGGAGATGAGTCCAGTTAGGGGCAACGAG...CGGCAGCTGCTGCGCTTTGCCAGTGATGCAGCCAACGGCATGCAGTACCTTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR CAA 90 bp | CCCTGCACACTGGCCCGCACACGGAAAAGATATCGTGTGCTAGCATaGAGGCCACGAACAATGATGCTTGTCTCCTCGGGCCTGTCTACA | + |
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Preference number: 2 (lower is better) Translates to: PCTLARTRKRYRVLA*RPRTMMLVSSGLST Trigger: TGTAGACAGGCCCGAGGAGACAAGCATCATTGTTCGTGGCCTCAATGCTAGCACACGATATCTTTTCCGTGTGCGGGCCAGTGTGCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR-3UTR TCA 90 bp | ACTAAGGTACTGCATGCCGTTGGCTGCATCACTGGCAAAGCGCAGCAGCTGCCGTGCTGCCACATGAGTTaGATCTCAGAGTCTGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: TKVLHAVGCITGKAQQLPCCHMS*ISESER Trigger: CCTCTCAGACTCTGAGATTCAACTCATGTGGCAGCA...CGGCAGCTGCTGCGCTTTGCCAGTGATGCAGCCAACGGCATGCAGTACCTTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR-3UTR TCA 90 bp | CCATCCAACGCACAGGGAGACGGCCCATTGTCTTCTTCACATACACCTCCTCCCTCAAGGTCCCTGAGCTaGACTGCAGGATGGTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: PSNAQGDGPLSSSHTPPPSRSLS*TAGWSL Trigger: AAGAGACCATCCTGCAGTTCAGCTCAGGGACCTTGA...GGGAGGAGGTGTATGTGAAGAAGACAATGGGCCGTCTCCCTGTGCGTTGGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR-3UTR CCA 90 bp | CCATCCAACGCACAGGGAGACGGCCCATTGTCTTCTTCACATACACCTCCTCCCGTCCAAAGTCACAGGTaGAAGCAATTTGCTCCGGCC | + |
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Preference number: 2 (lower is better) Translates to: PSNAQGDGPLSSSHTPPPVQSHR*KQFAPA Trigger: GGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGAC...GGGAGGAGGTGTATGTGAAGAAGACAATGGGCCGTCTCCCTGTGCGTTGGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR-3UTR CCA 90 bp | CACTTCGTCATCGCAGTTTCGAGGCTGCTCCATGCGATAGCCTTGAGGCAGCTTGCCCATTGCCCAGAGTaGCCTCTTCTACTGTATTGC | + |
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Preference number: 2 (lower is better) Translates to: HFVIAVSRLLHAIALRQLAHCPE*PLLLYC Trigger: GCAATACAGTAGAAGAGGCCACTCTGGGCAATGGGC...AAGCTGCCTCAAGGCTATCGCATGGAGCAGCCTCGAAACTGCGATGACGAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACAGGTGGAAGTCCCTGAGCTGAACTaGAGGATGGTCTCTTCACCC | + |
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Preference number: 2 (lower is better) Translates to: FLETAWVRGEKGPKSQVEVPELN*RMVSSP Trigger: GGGTGAAGAGACCATCCTGCAGTTCAGCTCAGGGAC...TTCCACCTGTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR-3UTR GCA 90 bp | CACTTCGTCATCGCAGTTTCGAGGCTGCTCCATGCGATAGCCTTGAGGCAGCTTAGAAAGGCCAAAGTCTaGAATCTTGGAGGCCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: HFVIAVSRLLHAIALRQLRKAKV*NLGGQV Trigger: AACCTGGCCTCCAAGATTGCAGACTTTGGCCTTTCT...AAGCTGCCTCAAGGCTATCGCATGGAGCAGCCTCGAAACTGCGATGACGAAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACAGGTGGAAATCCTGACTGGTAAGTaGAGGTGCGTCTCCGATGTA | + |
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Preference number: 2 (lower is better) Translates to: FLETAWVRGEKGPKSQVEILTGK*RCVSDV Trigger: TACATCGGAGACGCACCTTCACTTACCAGTCAGGAT...TTCCACCTGTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR CAA 90 bp | TTTTCAGACGCATACTCTTTTAGCATCTTGATGGCTGCGTTCATCTaGAGCCCGTCCTTCTTGATCATGGCCCGGATCACTTGGCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: FSDAYSFSILMAAFI*SPSFLIMARITWPK Trigger: CTTTGGCCAAGTGATCCGGGCCATGATCAAGAAGGACGGGCTCAAGATGAACGCAGCCATCAAGATGCTAAAAGAGTATGCGTCTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTTTCTGAGTATAAGCAGAGAGTCGGGGGCTAAACAGGGTGTTAGTAACATGGTCCAAAGTCACAGGTaGAAGCAATTTGCTCCGGCC | + |
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Preference number: 2 (lower is better) Translates to: IFLSISRESGAKQGVSNMVQSHR*KQFAPA Trigger: GGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGAC...CATGTTACTAACACCCTGTTTAGCCCCCGACTCTCTGCTTATACTCAGAAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| 3UTR CCA 72 bp | ATCCAGGCCTTCTTCAGCTGCCCGGCTTTCTCGGACTaGGCCCTCACTCTGCAGCCCATTGCCCAGAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: IQAFFSCPAFSD*ALTLQPIAQSG Trigger: GCCACTCTGGGCAATGGGCTGCAGAGTGAGGGCCCAGTCCGAGAAAGCCGGGCAGCTGAAGAAGGCCTGGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR TCA 72 bp | GGCCCAGACGGAGCCTCGGGATGCTGCCACATGAGTTaGATCTCAGAGTCTGAGAGGGCCTGGGCATGGAGG | + |
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Preference number: 3 (lower is better) Translates to: GPDGASGCCHMS*ISESERAWAWR Trigger: CCTCCATGCCCAGGCCCTCTCAGACTCTGAGATTCAACTCATGTGGCAGCATCCCGAGGCTCCGTCTGGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR TCA 72 bp | GCAGAGACGGAACCTACCACAGCCAGGACCAGCTGCTaGTCCAGGCCTTCTTCAGCTGCCCGGCTTTCTCGG | + |
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Preference number: 3 (lower is better) Translates to: AETEPTTARTSC*SRPSSAARLSR Trigger: CCGAGAAAGCCGGGCAGCTGAAGAAGGCCTGGATCAGCAGCTGGTCCTGGCTGTGGTAGGTTCCGTCTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR GCA 72 bp | ATGCCGTTGGCTGCATCACTGGCAAAGCGCAGCAGCTaGCGAGAGCTGAGTGTGGAGGCCGTCCCATGCTCT | + |
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Preference number: 3 (lower is better) Translates to: MPLAASLAKRSS*RELSVEAVPCS Trigger: AGAGCATGGGACGGCCTCCACACTCAGCTCTCGGCAGCTGCTGCGCTTTGCCAGTGATGCAGCCAACGGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR TCA 72 bp | CTGTGGCTTCGGTCGCCGGGTCAAGGTCAAGGTCCCTaGGCTGAACTGCAGGATGGTCTCTTCACCCGATCC | + |
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Preference number: 3 (lower is better) Translates to: LWLRSPGQGQGP*AELQDGLFTRS Trigger: GGATCGGGTGAAGAGACCATCCTGCAGTTCAGCTCAGGGACCTTGACCTTGACCCGGCGACCGAAGCCACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR TCA 72 bp | CTGCATCACTGGCAAAGCGCAGCAGCTGCCGAGAGCTaGGTGTGGAGGCCGTCCCATGCTCTCGAGCAAAAG | + |
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Preference number: 3 (lower is better) Translates to: LHHWQSAAAAES*VWRPSHALEQK Trigger: CTTTTGCTCGAGAGCATGGGACGGCCTCCACACTCAGCTCTCGGCAGCTGCTGCGCTTTGCCAGTGATGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR GCA 72 bp | GCAGCCCATTGCCCAGAGTGGCCTCTTCTACTGTATTaGTCCAGTCGCCAAGACCCTGCACACTGGCCCGCA | + |
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Preference number: 3 (lower is better) Translates to: AAHCPEWPLLLY*SSRQDPAHWPA Trigger: TGCGGGCCAGTGTGCAGGGTCTTGGCGACTGGAGCAATACAGTAGAAGAGGCCACTCTGGGCAATGGGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR GCA 72 bp | AGCAGCTGCCGAGAGCTGAGTGTGGAGGCCGTCCCATaGTCTCGAGCAAAAGCTGGATCAGTCTCCAGGACC | + |
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Preference number: 3 (lower is better) Translates to: SSCRELSVEAVP*SRAKAGSVSRT Trigger: GGTCCTGGAGACTGATCCAGCTTTTGCTCGAGAGCATGGGACGGCCTCCACACTCAGCTCTCGGCAGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR-3UTR CAA 90 bp | CCATCCAACGCACAGGGAGACGGCCCATTGTCTTCTTCACATACACCTCCTCCCCATGGCCCGGATCACTaGGCCAAAGTTGCCCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: PSNAQGDGPLSSSHTPPPHGPDH*AKVALP Trigger: GGGGAGGGCAACTTTGGCCAAGTGATCCGGGCCATG...GGGAGGAGGTGTATGTGAAGAAGACAATGGGCCGTCTCCCTGTGCGTTGGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR TCA 72 bp | GCTTCGGTCGCCGGGTCAAGGTCAAGGTCCCTGAGCTaGACTGCAGGATGGTCTCTTCACCCGATCCTGACT | + |
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Preference number: 3 (lower is better) Translates to: ASVAGSRSRSLS*TAGWSLHPILT Trigger: AGTCAGGATCGGGTGAAGAGACCATCCTGCAGTTCAGCTCAGGGACCTTGACCTTGACCCGGCGACCGAAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR GCA 72 bp | TTCGGGCAGCCAGGTCCCTGCTTCTCACTAAGGTACTaGATGCCGTTGGCTGCATCACTGGCAAAGCGCAGC | + |
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Preference number: 3 (lower is better) Translates to: FGQPGPCFSLRY*MPLAASLAKRS Trigger: GCTGCGCTTTGCCAGTGATGCAGCCAACGGCATGCAGTACCTTAGTGAGAAGCAGGGACCTGGCTGCCCGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR GCA 72 bp | GCGACATGTTCACGTAGGCCTTCCTGGCTTCCAGCATaGGGCCCAACTGTAGTGCGATCTGAGCAAAGGGGG | + |
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Preference number: 3 (lower is better) Translates to: ATCSRRPSWLPA*GPTVVRSEQRG Trigger: CCCCCTTTGCTCAGATCGCACTACAGTTGGGCCGCATGCTGGAAGCCAGGAAGGCCTACGTGAACATGTCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR CCA 72 bp | GGACTGGGCCCTCACTCTGCAGCCCATTGCCCAGAGTaGCCTCTTCTACTGTATTGCTCCAGTCGCCAAGAC | + |
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Preference number: 3 (lower is better) Translates to: GLGPHSAAHCPE*PLLLYCSSRQD Trigger: GTCTTGGCGACTGGAGCAATACAGTAGAAGAGGCCACTCTGGGCAATGGGCTGCAGAGTGAGGGCCCAGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR-3UTR CAA 90 bp | GGAGGCCGTCCCATGCTCTCGAGCAAAAGCTGGATCAGTCTCCAGGACCCTGCTTTGAGCCCGTCCTTCTaGATCATGGCCCGGATCACT | + |
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Preference number: 3 (lower is better) Translates to: GGRPMLSSKSWISLQDPALSPSF*IMARIT Trigger: AGTGATCCGGGCCATGATCAAGAAGGACGGGCTCAA...AGCAGGGTCCTGGAGACTGATCCAGCTTTTGCTCGAGAGCATGGGACGGCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR-3UTR CAA 90 bp | GGAAGGGTAGCTATGGGAACAGCTGGCAAGAAAGGGGATGCCTGTTTCCCTCCCACAGGTGGAAGCAATTaGCTCCGGCCAGCAGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: GRVAMGTAGKKGDACFPPTGGSN*LRPAEP Trigger: TGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGT...GGGAGGGAAACAGGCATCCCCTTTCTTGCCAGCTGTTCCCATAGCTACCCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| 3UTR-3UTR CAA 90 bp | ATCTCCACGATGTACTTGGATATAGGCCCAGACGGAGCCTCGGGATGCTGCCACGATCAGAAGTGGGGTTaGGGTTTGGGGAGCCGCAGA | + |
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Preference number: 3 (lower is better) Translates to: ISTMYLDIGPDGASGCCHDQKWG*GLGSRR Trigger: TCTGCGGCTCCCCAAACCCAAACCCCACTTCTGATC...GTGGCAGCATCCCGAGGCTCCGTCTGGGCCTATATCCAAGTACATCGTGGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR GCA 72 bp | TCCCTGCTTCTCACTAAGGTACTGCATGCCGTTGGCTaGATCACTGGCAAAGCGCAGCAGCTGCCGAGAGCT | + |
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Preference number: 3 (lower is better) Translates to: SLLLTKVLHAVG*ITGKAQQLPRA Trigger: AGCTCTCGGCAGCTGCTGCGCTTTGCCAGTGATGCAGCCAACGGCATGCAGTACCTTAGTGAGAAGCAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR CCA 72 bp | GAGCCTTGTGCTTCCTTCCTCCTCGTTGCCCCTAACTaGACTCATCTCCATCCCCAAGGTACCTCCACCTCC | + |
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Preference number: 3 (lower is better) Translates to: EPCASFLLVAPN*THLHPQGTSTS Trigger: GGAGGTGGAGGTACCTTGGGGATGGAGATGAGTCCAGTTAGGGGCAACGAGGAGGAAGGAAGCACAAGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| 3UTR CCA 72 bp | GAGTGTGGAGGCCGTCCCATGCTCTCGAGCAAAAGCTaGATCAGTCTCCAGGACCCTGCTCTTTCTCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: ECGGRPMLSSKS*ISLQDPALSQE Trigger: TTCCTGAGAAAGAGCAGGGTCCTGGAGACTGATCCAGCTTTTGCTCGAGAGCATGGGACGGCCTCCACACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| 3UTR TCA 72 bp | GCAGGATGGTCTCTTCACCCGATCCTGACTGGTAAGTaGAGGTGCGTCTCCGATGTAGGCAGCTTCTTCGGA | + |
|
Preference number: 3 (lower is better) Translates to: AGWSLHPILTGK*RCVSDVGSFFG Trigger: TCCGAAGAAGCTGCCTACATCGGAGACGCACCTTCACTTACCAGTCAGGATCGGGTGAAGAGACCATCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| 3UTR TCA 72 bp | AGGCCTCCTCAGCTGTGGCATCGATGCCCGCATAGGTaGAGTTCTCAAACAGCGACATGTTCACGTAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: RPPQLWHRCPHR*SSQTATCSRRP Trigger: AGGCCTACGTGAACATGTCGCTGTTTGAGAACTTCACCTATGCGGGCATCGATGCCACAGCTGAGGAGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| 3UTR GCA 72 bp | GCCTCTTCTACTGTATTGCTCCAGTCGCCAAGACCCTaGACACTGGCCCGCACACGGAAAAGATATCGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: ASSTVLLQSPRP*TLARTRKRYRV Trigger: CACACGATATCTTTTCCGTGTGCGGGCCAGTGTGCAGGGTCTTGGCGACTGGAGCAATACAGTAGAAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| 3UTR CCA 72 bp | TGCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTaGGGAGCCGCAGAGAGGAAGGGTAGCTATGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: CFRWRIRSGVWV*GAAERKGSYGN Trigger: GTTCCCATAGCTACCCTTCCTCTCTGCGGCTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| 3UTR-3UTR CAA 90 bp | GCATCAGCTCGTACACTTCGTCATCGCAGTTTCGAGGCTGCTCCATGCGATAGCGGAGGAAGGGGTAGATaGGATGGGGTTATAGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: ASARTLRHRSFEAAPCDSGGRGR*DGVIEL Trigger: CAGCTCTATAACCCCATCCAATCTACCCCTTCCTCC...GCTATCGCATGGAGCAGCCTCGAAACTGCGATGACGAAGTGTACGAGCTGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| 3UTR CCA 72 bp | CTCATCTCCATCCCCAAGGTACCTCCACCTCCCATATaGGAACCCTCCCAAGAGGGTTTCCCACTTCTCATA | + |
|
Preference number: 3 (lower is better) Translates to: LISIPKVPPPPI*EPSQEGFPLLI Trigger: TATGAGAAGTGGGAAACCCTCTTGGGAGGGTTCCCATATGGGAGGTGGAGGTACCTTGGGGATGGAGATGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| 3UTR TCA 72 bp | CTAGGCCTCTCTATGCTCTCAGTAGCTTATGCTCCCTaGGCCCCCAATGGCCCTGTTCTTTACGAGTCACAA | + |
|
Preference number: 3 (lower is better) Translates to: LGLSMLSVAYAP*APNGPVLYESQ Trigger: TTGTGACTCGTAAAGAACAGGGCCATTGGGGGCTCAGGGAGCATAAGCTACTGAGAGCATAGAGAGGCCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| 3UTR CCA 72 bp | TGTCCTCCTGGTATCTTCTATCTTCCCCATTCATCCTaGGTGCTCTCCTCGTCCACCCAGTCTCTTGTAACC | + |
|
Preference number: 3 (lower is better) Translates to: CPPGIFYLPHSS*VLSSSTQSLVT Trigger: GGTTACAAGAGACTGGGTGGACGAGGAGAGCACCCAGGATGAATGGGGAAGATAGAAGATACCAGGAGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| 3UTR-3UTR CAA 90 bp | CACTTCGTCATCGCAGTTTCGAGGCTGCTCCATGCGATAGCCTTGAGGCAGCTTGGGTGGTGTCCTAGTTaGCACAGAACTTCTAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: HFVIAVSRLLHAIALRQLGWCPS*HRTSSS Trigger: TGAACTAGAAGTTCTGTGCAAACTAGGACACCACCC...AAGCTGCCTCAAGGCTATCGCATGGAGCAGCCTCGAAACTGCGATGACGAAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGCTGTGGGGTCAGTCACAGTCACTCTAGAGTATAATTTGCTTTGTGGATCCACAGGTGGAAGCAATTaGCTCCGGCCAGCAGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: RAVGSVTVTLEYNLLCGSTGGSN*LRPAEP Trigger: TGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGT...GGATCCACAAAGCAAATTATACTCTAGAGTGACTGTGACTGACCCCACAGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| 3UTR CCA 72 bp | TATGCTCTCAGTAGCTTATGCTCCCTGAGCCCCCAATaGCCCTGTTCTTTACGAGTCACAATTTCCTCACGT | + |
|
Preference number: 3 (lower is better) Translates to: YALSSLCSLSPQ*PCSLRVTISSR Trigger: ACGTGAGGAAATTGTGACTCGTAAAGAACAGGGCCATTGGGGGCTCAGGGAGCATAAGCTACTGAGAGCATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAATATTGGGGTGGTGTCCTAGTTTGCACAGAACTTCTAGTTCACCTGCAAAGTCACTCTGCAGCCCATaGCCCAGAGTGGCCTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: IILGWCPSLHRTSSSPAKSLCSP*PRVASS Trigger: AGAAGAGGCCACTCTGGGCAATGGGCTGCAGAGTGA...CTTTGCAGGTGAACTAGAAGTTCTGTGCAAACTAGGACACCACCCCAATATTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTATTTTTCTGAGTATAAGCAGAGAGTCGGGGGCTAAACAGGGTGTTAGTAACGATCAGAAGTGGGGTTaGGGTTTGGGGAGCCGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: FIFLSISRESGAKQGVSNDQKWG*GLGSRR Trigger: TCTGCGGCTCCCCAAACCCAAACCCCACTTCTGATC...GTTACTAACACCCTGTTTAGCCCCCGACTCTCTGCTTATACTCAGAAAAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACAGGTGGAATACTCTTTTAGCATCTaGATGGCTGCGTTCATCTTG | + |
|
Preference number: 3 (lower is better) Translates to: FLETAWVRGEKGPKSQVEYSFSI*MAAFIL Trigger: CAAGATGAACGCAGCCATCAAGATGCTAAAAGAGTA...TTCCACCTGTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| 3UTR CCA 72 bp | TTCTCACAGGCCCCCAAGAGGTTGATAATATTGGGGTaGTGTCCTAGTTTGCACAGAACTTCTAGTTCACCT | + |
|
Preference number: 3 (lower is better) Translates to: FSQAPKRLIILG*CPSLHRTSSSP Trigger: AGGTGAACTAGAAGTTCTGTGCAAACTAGGACACCACCCCAATATTATCAACCTCTTGGGGGCCTGTGAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGTGGCAGAGACGGAACCTACCACAGCCAGGACCAGCTGCTGATCCAGGCCGCCAGGTACAGGGGCTaGCCAGGCGGGAAGGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: AGGRDGTYHSQDQLLIQAARYRG*PGGKVR Trigger: GCGCACCTTCCCGCCTGGGCAGCCCCTGTACCTGGC...GGCCTGGATCAGCAGCTGGTCCTGGCTGTGGTAGGTTCCGTCTCTGCCACCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGTAGCTATGGGAACAGCTGGCAAGAAAGGGGATGCCTGTTTCCCTCCCCACATGCGCAGGGGGTaGGGCAGGGCCCAGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRVAMGTAGKKGDACFPPHMRRG*GRAQEG Trigger: ACCCTCCTGGGCCCTGCCTCACCCCCTGCGCATGTG...GGGAGGGAAACAGGCATCCCCTTTCTTGCCAGCTGTTCCCATAGCTACCCTTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR TCA 90 bp | GGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCTGCAGCTGCCGAGAGCTaGGTGTGGAGGCCGTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GSKVTGGSNLLRPAEPGAAAAES*VWRPSH Trigger: ATGGGACGGCCTCCACACTCAGCTCTCGGCAGCTGC...AGCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR GCA 90 bp | GTGAGAAGGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCGCCAGGTACAGGGGCTaGCCAGGCGGGAAGGTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VRRVQSHRWKQFAPASRAARYRG*PGGKVR Trigger: GCGCACCTTCCCGCCTGGGCAGCCCCTGTACCTGGC...GGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCCTTCTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCCATGCTGCCCCGCACTaGGAAGGGATTCCCGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RVQSHRWKQFAPASRARGHAAPH*EGIPGS Trigger: GCTGCCGGGAATCCCTTCCCAGTGCGGGGCAGCATG...GCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR TCA 90 bp | GGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCTCACAGCGGGTGCCAGTaGATCCTGGGGGACACACAC | + |
|
Preference number: 4 (lower is better) Translates to: GSKVTGGSNLLRPAEPGAHSGCQ*ILGDTH Trigger: GTGTGTGTCCCCCAGGATTCACTGGCACCCGCTGTG...AGCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR TCA 90 bp | AGGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCCGGCAGCTGCACAGTTaGTCCGGGGCATCGTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: RVQSHRWKQFAPASRARGRQLHS*SGASSL Trigger: TAGGGACGATGCCCCGGATCAACTGTGCAGCTGCCG...GCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCTTCTCCTCCTTCCCCTaGCCGGCTCAGCTGCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: RVQSHRWKQFAPASRARGFSSFP*PAQLHS Trigger: CGAGTGCAGCTGAGCCGGCCAGGGGAAGGAGGAGAA...GCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCTGGTGGTTCTCCTCCTTCCCCTaGCCGGCTCAGCTGCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: QSHRWKQFAPASRARGWWFSSFP*PAQLHS Trigger: CGAGTGCAGCTGAGCCGGCCAGGGGAAGGAGGAGAA...CCACCAGCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGAAGGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCGAGAGGGCCTGGGCATaGAGGTGGCGGGGAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VRRVQSHRWKQFAPASRAERAWA*RWRGAG Trigger: TCCAGCTCCCCGCCACCTCCATGCCCAGGCCCTCTC...GGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCCTTCTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR TCA 90 bp | CATGGCCCGGATCACTTGGCCAAAGTTGCCCTCCCCTATGAGGTCCTCAAAGGTGGCAGACGCAGCCGCTaGACCGGTCACAAGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HGPDHLAKVALPYEVLKGGRRSR*TGHKCH Trigger: GTGGCACTTGTGACCGGTTCAGCGGCTGCGTCTGCC...ACCTTTGAGGACCTCATAGGGGAGGGCAACTTTGGCCAAGTGATCCGGGCCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| CDS-3UTR GCA 90 bp | GGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCTCAGACCAGGCAATCGTaGTGTCCTGGGGCCGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSKVTGGSNLLRPAEPGAQTRQS*CPGAGS Trigger: ACTACCGGCCCCAGGACAGCACGATTGCCTGGTCTG...AGCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR GCA 90 bp | GGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCTGCTCAGCACAGGTCATaGCACAGTAGGGCGTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSKVTGGSNLLRPAEPGAAQHRS*HSRACL Trigger: GAGGCACGCCCTACTGTGGCATGACCTGTGCTGAGC...AGCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR GCA 90 bp | AGGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCCGATCCCGCCAGCACTaGCGCATCAGCTCGTACACT | + |
|
Preference number: 4 (lower is better) Translates to: RVQSHRWKQFAPASRARGRSRQH*RISSYT Trigger: AGTGTACGAGCTGATGCGGCAGTGCTGGCGGGATCG...GCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR CCA 90 bp | GCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGCCGCAGAGAGGAGAGTCTGAGAGGGCCTaGGCATGGAGGTGGCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALGGGSEVGFGFGEPQRGESERA*AWRWRG Trigger: TCCCCGCCACCTCCATGCCCAGGCCCTCTCAGACTC...TCCTCTCTGCGGCTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| 3UTR CAA 72 bp | TGCAGCCCATTGCCCAGAGTGGCCTCTTCTACTGTATaGCTCCAGTCGCCAAGACCCTGCACACTGGCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: CSPLPRVASSTV*LQSPRPCTLAR Trigger: GCGGGCCAGTGTGCAGGGTCTTGGCGACTGGAGCAATACAGTAGAAGAGGCCACTCTGGGCAATGGGCTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| CDS-3UTR TCA 90 bp | GGTGAGAAGGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCTCAGCGTGACCTGGTaGGAACCGTTGCGTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GEKGPKSQVEAICSGQQSLSVTW*EPLRAR Trigger: CCTGGCACGCAACGGTTCTCACCAGGTCACGCTGAG...GCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCCTTCTCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CCA 90 bp | GGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCTAAGCGCCGGCTGTCTTaGCCACCAGAAGTCGATACG | + |
|
Preference number: 4 (lower is better) Translates to: GSKVTGGSNLLRPAEPGAKRRLS*PPEVDT Trigger: CGTATCGACTTCTGGTGGCCAAGACAGCCGGCGCTT...AGCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGCCGCAGAGAGGGCTGACGGCTCTGCTTaGCCAGGAGTCGAGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CFRWRIRSGVWVWGAAERADGSA*PGVEVQ Trigger: CTGCACCTCGACTCCTGGCCAAGCAGAGCCGTCAGC...CCTCTCTGCGGCTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCTGGTGGATGGCCCGGATCACTTaGCCAAAGTTGCCCTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QSHRWKQFAPASRARGWWMARIT*PKLPSP Trigger: AGGGGAGGGCAACTTTGGCCAAGTGATCCGGGCCAT...CCACCAGCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| 3UTR CAA 72 bp | CCAGGTCCCTGCTTCTCACTAAGGTACTGCATGCCGTaGGCTGCATCACTGGCAAAGCGCAGCAGCTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PGPCFSLRYCMP*AASLAKRSSCR Trigger: TCGGCAGCTGCTGCGCTTTGCCAGTGATGCAGCCAACGGCATGCAGTACCTTAGTGAGAAGCAGGGACCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGTGGCAGAGACGGAACCTACCACAGCCAGGACCAGCTGCTGATCCAGGCCACAGACGCACCAACATaGGAGGCCAAGAAAAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AGGRDGTYHSQDQLLIQATDAPT*EAKKRV Trigger: CACTCTTTTCTTGGCCTCTCATGTTGGTGCGTCTGT...GGCCTGGATCAGCAGCTGGTCCTGGCTGTGGTAGGTTCCGTCTCTGCCACCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| CDS-3UTR TCA 90 bp | GGAGGCCGTCCCATGCTCTCGAGCAAAAGCTGGATCAGTCTCCAGGACCCTGCTTCGCCATCATGGTCATaGCAGACACCTCCATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGRPMLSSKSWISLQDPASPSWS*QTPPCR Trigger: CCTGCATGGAGGTGTCTGTCATGACCATGATGGCGA...AGCAGGGTCCTGGAGACTGATCCAGCTTTTGCTCGAGAGCATGGGACGGCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| CDS-3UTR TCA 90 bp | GTGAGAAGGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCCCGGGAGGCAGAAGGTaGGACCTCTACAACCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VRRVQSHRWKQFAPASRAPGGRR*DLYNLL Trigger: CAGCAGGTTGTAGAGGTCTCACCTTCTGCCTCCCGG...GGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCCTTCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGCCGCAGAGAGGGGGATTCCCGGCAGCTaGACAGTTGATCCGGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CFRWRIRSGVWVWGAAERGIPGS*TVDPGH Trigger: ATGCCCCGGATCAACTGTGCAGCTGCCGGGAATCCC...CCTCTCTGCGGCTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR GCA 90 bp | GGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCTGGGCACTTCAAACTCTaGTGTGGTCCTGTCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSKVTGGSNLLRPAEPGAGHFKL*CGPVWL Trigger: GAGCCAGACAGGACCACAGCAGAGTTTGAAGTGCCC...AGCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR GCA 90 bp | GGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCTGTCCCTGAGCTGAACTaGAGGATGGTCTCTTCACCC | + |
|
Preference number: 4 (lower is better) Translates to: GSKVTGGSNLLRPAEPGAVPELN*RMVSSP Trigger: GGGTGAAGAGACCATCCTGCAGTTCAGCTCAGGGAC...AGCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR GCA 90 bp | AGGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCTTCGAGGCTGCTCCATaGGATAGCCTTGAGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RVQSHRWKQFAPASRARGFEAAP*DSLEAA Trigger: AGCTGCCTCAAGGCTATCGCATGGAGCAGCCTCGAA...GCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR CCA 90 bp | AGGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCGTGTGTGACCTTGTCTaGAAACAGGTGTGCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVQSHRWKQFAPASRARGVCDLV*KQVCPW Trigger: CCAGGGGCACACCTGTTTCCAGACAAGGTCACACAC...GCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CCA 90 bp | TGGTATCTTCTATCTTCCCCATTCATCCTGGGTGCTCTCCTCGTCCACCCAGTCCACTGCCCAGGGGGCTaGCCTCTAGGTAGGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: WYLLSSPFILGALLVHPVHCPGG*PLGRWH Trigger: GTGCCACCTACCTAGAGGCCAGCCCCCTGGGCAGTG...GACTGGGTGGACGAGGAGAGCACCCAGGATGAATGGGGAAGATAGAAGATACCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGCCGCAGAGAGGACGTTGGCTGCATCACTaGCAAAGCGCAGCAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALGGGSEVGFGFGEPQRGRWLHH*QSAAAA Trigger: GGCAGCTGCTGCGCTTTGCCAGTGATGCAGCCAACG...TCCTCTCTGCGGCTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
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| CDS-3UTR CCA 90 bp | CAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCTGGTGGGGTACTGCATGCCGTTaGCTGCATCACTGGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSHRWKQFAPASRARGWWGTACR*LHHWQS Trigger: GCTTTGCCAGTGATGCAGCCAACGGCATGCAGTACC...CCACCAGCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
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| CDS-3UTR CCA 90 bp | GCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGCCGCAGAGAGGAAGGCCTCCTCAGCTGTaGCATCGATGCCCGCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALGGGSEVGFGFGEPQRGRPPQL*HRCPHR Trigger: CCTATGCGGGCATCGATGCCACAGCTGAGGAGGCCT...TCCTCTCTGCGGCTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
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| CDS-3UTR TCA 90 bp | AGGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCCAATCAGCCCCAAAATaGCCAGGTGCACATGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVQSHRWKQFAPASRARGQSAPK*PGAHAS Trigger: GGAAGCATGTGCACCTGGTCATTTTGGGGCTGATTG...GCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR TCA 90 bp | GCATCAGCTCGTACACTTCGTCATCGCAGTTTCGAGGCTGCTCCATGCGATAGCCCTCTGTGGCCATACTaGGGATCTGGGGGATCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: ASARTLRHRSFEAAPCDSPLWPY*GSGGSG Trigger: ACCGGATCCCCCAGATCCTCAGTATGGCCACAGAGG...GCTATCGCATGGAGCAGCCTCGAAACTGCGATGACGAAGTGTACGAGCTGATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| CDS-3UTR TCA 90 bp | AGGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCCGATGCCCGCATAGGTaGAGTTCTCAAACAGCGACA | + |
|
Preference number: 4 (lower is better) Translates to: RVQSHRWKQFAPASRARGRCPHR*SSQTAT Trigger: TGTCGCTGTTTGAGAACTTCACCTATGCGGGCATCG...GCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
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| CDS-3UTR GCA 90 bp | TCGGGGGCTAAACAGGGTGTTAGTAACATGCATGCTGCTTTAGGTGGAGGATCACCCTCCCTGCAGGCCTaGTCACAGCGGGTGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGAKQGVSNMHAALGGGSPSLQA*SQRVPV Trigger: CACTGGCACCCGCTGTGAGCAGGCCTGCAGGGAGGG...TGATCCTCCACCTAAAGCAGCATGCATGTTACTAACACCCTGTTTAGCCCCCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR GCA 90 bp | GGTGAGAAGGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCGTGGAGGCCGTCCCATaGTCTCGAGCAAAAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GEKGPKSQVEAICSGQQSVEAVP*SRAKAG Trigger: TCCAGCTTTTGCTCGAGAGCATGGGACGGCCTCCAC...GCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCCTTCTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR CCA 90 bp | GGTGAGAAGGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCGTCAGGAAGAAACGCTaGGGGTCTGTGATGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GEKGPKSQVEAICSGQQSVRKKR*GSVMRR Trigger: CCTGCGCATCACAGACCCCCAGCGTTTCTTCCTGAC...GCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCCTTCTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR CCA 90 bp | AACATGCATGCTGCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGCACTGCCCAGGGGGCTaGCCTCTAGGTAGGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NMHAALGGGSEVGFGFGEHCPGG*PLGRWH Trigger: GTGCCACCTACCTAGAGGCCAGCCCCCTGGGCAGTG...CTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGCAGCATGCATGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR CCA 90 bp | GCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGCCGCAGAGAGGAAAGCGCCGGCTGTCTTaGCCACCAGAAGTCGATACG | + |
|
Preference number: 4 (lower is better) Translates to: ALGGGSEVGFGFGEPQRGKRRLS*PPEVDT Trigger: CGTATCGACTTCTGGTGGCCAAGACAGCCGGCGCTT...TCCTCTCTGCGGCTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR CCA 90 bp | GCATCAGCTCGTACACTTCGTCATCGCAGTTTCGAGGCTGCTCCATGCGATAGCAGGGCAGTGCGGGCCTaGGGGAATGAGATGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASARTLRHRSFEAAPCDSRAVRA*GNEMFS Trigger: GGAGAACATCTCATTCCCCCAGGCCCGCACTGCCCT...GCTATCGCATGGAGCAGCCTCGAAACTGCGATGACGAAGTGTACGAGCTGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| CDS-3UTR TCA 90 bp | GACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACAGGTGAGCCTGGGCAATCCTTaGCACATCCTGGCCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DFLETAWVRGEKGPKSQVSLGNP*HILAPS Trigger: GCTGGGGGCCAGGATGTGTCAAGGATTGCCCAGGCT...CACCTGTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR TCA 90 bp | CATGGCCCGGATCACTTGGCCAAAGTTGCCCTCCCCTATGAGGTCCTCAAAGGTCCTGGGCACTGTTCCTaGCAGCTCTGTCCAAAACGA | + |
|
Preference number: 4 (lower is better) Translates to: HGPDHLAKVALPYEVLKGPGHCS*QLCPKR Trigger: TCGTTTTGGACAGAGCTGTCAGGAACAGTGCCCAGG...ACCTTTGAGGACCTCATAGGGGAGGGCAACTTTGGCCAAGTGATCCGGGCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| CDS-3UTR TCA 90 bp | TGCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGCCGCAGAGAGGCAAGTGCCACCATTTTaGCACTGGCACTGGAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: CFRWRIRSGVWVWGAAERQVPPF*HWHWRR Trigger: TCGCCTCCAGTGCCAGTGTCAAAATGGTGGCACTTG...CCTCTCTGCGGCTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR TCA 90 bp | GTGAGAAGGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCCAAGGTCAAGGTCCCTaGGCTGAACTGCAGGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: VRRVQSHRWKQFAPASRAQGQGP*AELQDG Trigger: ACCATCCTGCAGTTCAGCTCAGGGACCTTGACCTTG...GGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCCTTCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
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| CDS-3UTR GCA 90 bp | CAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCTGGTGGAGGTGGCACTGTAGATaGCACTTGATGGTGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QSHRWKQFAPASRARGWWRWHCR*HLMVAV Trigger: TACAGCCACCATCAAGTGGCATCTACAGTGCCACCT...CCACCAGCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR GCA 90 bp | TGGTATCTTCTATCTTCCCCATTCATCCTGGGTGCTCTCCTCGTCCACCCAGTCGGGATTCCCGGCAGCTaGACAGTTGATCCGGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: WYLLSSPFILGALLVHPVGIPGS*TVDPGH Trigger: ATGCCCCGGATCAACTGTGCAGCTGCCGGGAATCCC...GACTGGGTGGACGAGGAGAGCACCCAGGATGAATGGGGAAGATAGAAGATACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| CDS-3UTR GCA 90 bp | CACTTCGTCATCGCAGTTTCGAGGCTGCTCCATGCGATAGCCTTGAGGCAGCTTCCTGGCCGGCTCAGCTaGACTCGGACATTGTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: HFVIAVSRLLHAIALRQLPGRLS*TRTLYP Trigger: AGGATACAATGTCCGAGTGCAGCTGAGCCGGCCAGG...AAGCTGCCTCAAGGCTATCGCATGGAGCAGCCTCGAAACTGCGATGACGAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| CDS-3UTR GCA 90 bp | AGGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCCCTCTTCTACTGTATTaGTCCAGTCGCCAAGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVQSHRWKQFAPASRARGPLLLY*SSRQDP Trigger: AGGGTCTTGGCGACTGGAGCAATACAGTAGAAGAGG...GCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
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| CDS-3UTR CCA 90 bp | AGGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCTGCTGTGGTCCTGTCTaGCTCCACAATGACTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RVQSHRWKQFAPASRARGCCGPV*LHNDFG Trigger: ACCAAAGTCATTGTGGAGCCAGACAGGACCACAGCA...GCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR CCA 90 bp | CAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCTGGTGGCCCCAAGAGTCAAACTaGGCACTTCAAACTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSHRWKQFAPASRARGWWPQESN*ALQTLL Trigger: CAGCAGAGTTTGAAGTGCCCAGTTTGACTCTTGGGG...CCACCAGCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR CCA 90 bp | GGCCACCTGAATCTCCACGATGTACTTGGATATAGGCCCAGACGGAGCCTCGGGACTAAAGGAGACCAGTaGGGAGACCACAAGCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: GHLNLHDVLGYRPRRSLGTKGDQ*GDHKLT Trigger: CGTCAGCTTGTGGTCTCCCCACTGGTCTCCTTTAGT...CCCGAGGCTCCGTCTGGGCCTATATCCAAGTACATCGTGGAGATTCAGGTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| CDS-3UTR TCA 90 bp | AAGACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACAGGCTCAGCGTGACCTGGTaGGAACCGTTGCGTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KTFLRQLGSEVRRVQSHRLSVTW*EPLRAR Trigger: CCTGGCACGCAACGGTTCTCACCAGGTCACGCTGAG...CCTGTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR TCA 90 bp | TCGGGGGCTAAACAGGGTGTTAGTAACATGCATGCTGCTTTAGGTGGAGGATCACGGCAGCTGCACAGTTaGTCCGGGGCATCGTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SGAKQGVSNMHAALGGGSRQLHS*SGASSL Trigger: TAGGGACGATGCCCCGGATCAACTGTGCAGCTGCCG...TGATCCTCCACCTAAAGCAGCATGCATGTTACTAACACCCTGTTTAGCCCCCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR TCA 90 bp | GTGAGAAGGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCTCAAGGTCCCTGAGCTaGACTGCAGGATGGTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VRRVQSHRWKQFAPASRASRSLS*TAGWSL Trigger: AAGAGACCATCCTGCAGTTCAGCTCAGGGACCTTGA...GGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCCTTCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
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| CDS-3UTR GCA 90 bp | GCTAAACAGGGTGTTAGTAACATGCATGCTGCTTTAGGTGGAGGATCAGAAGTGCCCTCCCTGCAGGCCTaGTCACAGCGGGTGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AKQGVSNMHAALGGGSEVPSLQA*SQRVPV Trigger: CACTGGCACCCGCTGTGAGCAGGCCTGCAGGGAGGG...CACTTCTGATCCTCCACCTAAAGCAGCATGCATGTTACTAACACCCTGTTTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR GCA 90 bp | AACATGCATGCTGCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGTCACAGTGGACTCCATaGCACCCAGAGGGGCAGACG | + |
|
Preference number: 4 (lower is better) Translates to: NMHAALGGGSEVGFGFGESQWTP*HPEGQT Trigger: CGTCTGCCCCTCTGGGTGGCATGGAGTCCACTGTGA...CTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGCAGCATGCATGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR GCA 90 bp | AACATGCATGCTGCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGCAGACCAGGCAATCGTaGTGTCCTGGGGCCGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: NMHAALGGGSEVGFGFGEQTRQS*CPGAGS Trigger: ACTACCGGCCCCAGGACAGCACGATTGCCTGGTCTG...CTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGCAGCATGCATGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR CCA 90 bp | CAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCTGGTGGTTTTCCTTGTGCACATaGGCAGAAAGCACAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QSHRWKQFAPASRARGWWFSLCT*AESTAV Trigger: CACTGCTGTGCTTTCTGCCCATGTGCACAAGGAAAA...CCACCAGCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR CCA 90 bp | GCCCCTAACTGGACTCATCTCCATCCCCAAGGTACCTCCACCTCCCATATGGGATGGCCTCTAGGTAGGTaGCACTGTAGATGCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: APNWTHLHPQGTSTSHMGWPLGR*HCRCHL Trigger: CAAGTGGCATCTACAGTGCCACCTACCTAGAGGCCA...TCCCATATGGGAGGTGGAGGTACCTTGGGGATGGAGATGAGTCCAGTTAGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| CDS-3UTR CCA 90 bp | GCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGCCGCAGAGAGGAGCCATACTGAGGATCTaGGGGATCCGGTCTGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ALGGGSEVGFGFGEPQRGAILRI*GIRSDF Trigger: AAAGTCAGACCGGATCCCCCAGATCCTCAGTATGGC...TCCTCTCTGCGGCTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR CCA 90 bp | CGGAAAAGATATCGTGTGCTAGCATTGAGGCCACGAACAATGATGCTTGTCTCCCATGCTGCCCCGCACTaGGAAGGGATTCCCGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKRYRVLALRPRTMMLVSHAAPH*EGIPGS Trigger: GCTGCCGGGAATCCCTTCCCAGTGCGGGGCAGCATG...GGAGACAAGCATCATTGTTCGTGGCCTCAATGCTAGCACACGATATCTTTTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| CDS-3UTR CCA 90 bp | AAGACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACAGGGCTGACGGCTCTGCTTaGCCAGGAGTCGAGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KTFLRQLGSEVRRVQSHRADGSA*PGVEVQ Trigger: CTGCACCTCGACTCCTGGCCAAGCAGAGCCGTCAGC...CCTGTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR CCA 90 bp | GGTGAGAAGGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCGCCCATTGCCCAGAGTaGCCTCTTCTACTGTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: GEKGPKSQVEAICSGQQSAHCPE*PLLLYC Trigger: GCAATACAGTAGAAGAGGCCACTCTGGGCAATGGGC...GCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCCTTCTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
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| 3UTR CAA 72 bp | CTGGCCCGCACACGGAAAAGATATCGTGTGCTAGCATaGAGGCCACGAACAATGATGCTTGTCTCCTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LARTRKRYRVLA*RPRTMMLVSSG Trigger: GCCCGAGGAGACAAGCATCATTGTTCGTGGCCTCAATGCTAGCACACGATATCTTTTCCGTGTGCGGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
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| CDS-3UTR TCA 90 bp | CAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCTGGTGGACTGTAGATGCCACTTaGTGGTGGCTGTACATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QSHRWKQFAPASRARGWWTVDAT*WWLYIL Trigger: CAAAATGTACAGCCACCATCAAGTGGCATCTACAGT...CCACCAGCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR TCA 90 bp | TCGGGGGCTAAACAGGGTGTTAGTAACATGCATGCTGCTTTAGGTGGAGGATCACCTCTGTGGCCATACTaGGGATCTGGGGGATCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SGAKQGVSNMHAALGGGSPLWPY*GSGGSG Trigger: ACCGGATCCCCCAGATCCTCAGTATGGCCACAGAGG...TGATCCTCCACCTAAAGCAGCATGCATGTTACTAACACCCTGTTTAGCCCCCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR GCA 90 bp | AACATGCATGCTGCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGCCTGGCCGGCTCAGCTaGACTCGGACATTGTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: NMHAALGGGSEVGFGFGEPGRLS*TRTLYP Trigger: AGGATACAATGTCCGAGTGCAGCTGAGCCGGCCAGG...CTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGCAGCATGCATGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR GCA 90 bp | AACATGCATGCTGCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGTCCTGGCTTCCAGCATaGGGCCCAACTGTAGTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: NMHAALGGGSEVGFGFGESWLPA*GPTVVR Trigger: TCGCACTACAGTTGGGCCGCATGCTGGAAGCCAGGA...CTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGCAGCATGCATGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR CCA 90 bp | ATCTCCACGATGTACTTGGATATAGGCCCAGACGGAGCCTCGGGATGCTGCCACAGGCCAAGAAAAGAGTaGGGAGCAGCAAAGAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: ISTMYLDIGPDGASGCCHRPRKE*GAAKRI Trigger: GATCCTCTTTGCTGCTCCCCACTCTTTTCTTGGCCT...GTGGCAGCATCCCGAGGCTCCGTCTGGGCCTATATCCAAGTACATCGTGGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGCCGCAGAGAGGATCTGACTTTTCACAGTaGACTCCATGCCACCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ALGGGSEVGFGFGEPQRGSDFSQ*TPCHPE Trigger: CTCTGGGTGGCATGGAGTCCACTGTGAAAAGTCAGA...TCCTCTCTGCGGCTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CCA 90 bp | GGTGAGAAGGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCTTCAAACTCTGCTGTaGTCCTGTCTGGCTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: GEKGPKSQVEAICSGQQSLQTLL*SCLAPQ Trigger: TTGTGGAGCCAGACAGGACCACAGCAGAGTTTGAAG...GCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCCTTCTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACAGGTGGAAAGGGCAGTGCGGGCCTaGGGGAATGAGATGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLETAWVRGEKGPKSQVERAVRA*GNEMFS Trigger: GGAGAACATCTCATTCCCCCAGGCCCGCACTGCCCT...TTCCACCTGTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CCA 90 bp | TCGGGGGCTAAACAGGGTGTTAGTAACATGCATGCTGCTTTAGGTGGAGGATCATCACGTAGGCCTTCCTaGCTTCCAGCATGCGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGAKQGVSNMHAALGGGSSRRPS*LPACGP Trigger: TGGGCCGCATGCTGGAAGCCAGGAAGGCCTACGTGA...TGATCCTCCACCTAAAGCAGCATGCATGTTACTAACACCCTGTTTAGCCCCCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR TCA 90 bp | GCTAAACAGGGTGTTAGTAACATGCATGCTGCTTTAGGTGGAGGATCAGAAGTGCACAGCGGGTGCCAGTaGATCCTGGGGGACACACAC | + |
|
Preference number: 4 (lower is better) Translates to: AKQGVSNMHAALGGGSEVHSGCQ*ILGDTH Trigger: GTGTGTGTCCCCCAGGATTCACTGGCACCCGCTGTG...CACTTCTGATCCTCCACCTAAAGCAGCATGCATGTTACTAACACCCTGTTTAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR TCA 90 bp | ATTAAAGACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCAGCGGGCCTGGGGGAATaGGATGTTCTCCCGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IKDFLETAWVRGEKGPKSAGLGE*DVLPPL Trigger: GAGAGGCGGGAGAACATCTCATTCCCCCAGGCCCGC...TGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTCTTTAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR TCA 90 bp | TTTATTTTTCTGAGTATAAGCAGAGAGTCGGGGGCTAAACAGGGTGTTAGTAACCACATGCGCAGGGGGTaGGGCAGGGCCCAGGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FIFLSISRESGAKQGVSNHMRRG*GRAQEG Trigger: ACCCTCCTGGGCCCTGCCTCACCCCCTGCGCATGTG...GTTACTAACACCCTGTTTAGCCCCCGACTCTCTGCTTATACTCAGAAAAATAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR GCA 90 bp | TGCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGCCGCAGAGAGGGTCTGCTTTTCCTTGTaGACATGGGCAGAAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: CFRWRIRSGVWVWGAAERVCFSL*TWAEST Trigger: TGTGCTTTCTGCCCATGTGCACAAGGAAAAGCAGAC...CCTCTCTGCGGCTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR GCA 90 bp | GGTGAGAAGGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGATCACGTCAGTCTaGTTTTCCTTGTGCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: GEKGPKSQVEAICSGQQSQITSV*FSLCTW Trigger: CCATGTGCACAAGGAAAAGCAGACTGACGTGATCTG...GCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCCTTCTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CCA 90 bp | ACCCATGTCCTCCTGGTATCTTCTATCTTCCCCATTCATCCTGGGTGCTCTCCTGTGTGTGACCTTGTCTaGAAACAGGTGTGCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: THVLLVSSIFPIHPGCSPVCDLV*KQVCPW Trigger: CCAGGGGCACACCTGTTTCCAGACAAGGTCACACAC...AGGAGAGCACCCAGGATGAATGGGGAAGATAGAAGATACCAGGAGGACATGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGCCGCAGAGAGGATTTTCCTTGTGCACATaGGCAGAAAGCACAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALGGGSEVGFGFGEPQRGFSLCT*AESTAV Trigger: CACTGCTGTGCTTTCTGCCCATGTGCACAAGGAAAA...TCCTCTCTGCGGCTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CCA 90 bp | AAGACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACAGGGGTGCCAGTGAATCCTaGGGGACACACACATTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KTFLRQLGSEVRRVQSHRGASES*GTHTFA Trigger: GGCGAATGTGTGTGTCCCCCAGGATTCACTGGCACC...CCTGTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CCA 90 bp | GCTAAACAGGGTGTTAGTAACATGCATGCTGCTTTAGGTGGAGGATCAGAAGTGCAAGGGCTCAGGCTGTaGCTTCGGTCGCCGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AKQGVSNMHAALGGGSEVQGLRL*LRSPGQ Trigger: TTGACCCGGCGACCGAAGCCACAGCCTGAGCCCTTG...CACTTCTGATCCTCCACCTAAAGCAGCATGCATGTTACTAACACCCTGTTTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR TCA 90 bp | AAGACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACAGGTCGCCATCATGGTCATaGCAGACACCTCCATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KTFLRQLGSEVRRVQSHRSPSWS*QTPPCR Trigger: CCTGCATGGAGGTGTCTGTCATGACCATGATGGCGA...CCTGTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR TCA 90 bp | GACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACAGGTGCAATCAGCCCCAAAATaGCCAGGTGCACATGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DFLETAWVRGEKGPKSQVQSAPK*PGAHAS Trigger: GGAAGCATGTGCACCTGGTCATTTTGGGGCTGATTG...CACCTGTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR TCA 90 bp | ATTTTTCTGAGTATAAGCAGAGAGTCGGGGGCTAAACAGGGTGTTAGTAACATGGGCAGACGCAGCCGCTaGACCGGTCACAAGTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IFLSISRESGAKQGVSNMGRRSR*TGHKCH Trigger: GTGGCACTTGTGACCGGTTCAGCGGCTGCGTCTGCC...CATGTTACTAACACCCTGTTTAGCCCCCGACTCTCTGCTTATACTCAGAAAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR TCA 90 bp | TCGGGGGCTAAACAGGGTGTTAGTAACATGCATGCTGCTTTAGGTGGAGGATCAGCATCGTCCCTATGTTaGACTCCACCTCTGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGAKQGVSNMHAALGGGSASSLC*TPPLWP Trigger: TGGCCACAGAGGTGGAGTTCAACATAGGGACGATGC...TGATCCTCCACCTAAAGCAGCATGCATGTTACTAACACCCTGTTTAGCCCCCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR TCA 90 bp | ATTTTTCTGAGTATAAGCAGAGAGTCGGGGGCTAAACAGGGTGTTAGTAACATGGCGGGCCTGGGGGAATaGGATGTTCTCCCGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IFLSISRESGAKQGVSNMAGLGE*DVLPPL Trigger: GAGAGGCGGGAGAACATCTCATTCCCCCAGGCCCGC...CATGTTACTAACACCCTGTTTAGCCCCCGACTCTCTGCTTATACTCAGAAAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR GCA 90 bp | ATTAAAGACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCAGCCGAAAGAAGGCACTaGCCAGGGGGCTGGCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: IKDFLETAWVRGEKGPKSAERRH*PGGWPL Trigger: TAGAGGCCAGCCCCCTGGGCAGTGCCTTCTTTCGGC...TGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTCTTTAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR GCA 90 bp | TCGGGGGCTAAACAGGGTGTTAGTAACATGCATGCTGCTTTAGGTGGAGGATCATGGTGCCATCTGGCTTaGGAAGTTTCATGCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SGAKQGVSNMHAALGGGSWCHLA*EVSCCP Trigger: GGGGCAGCATGAAACTTCGCAAGCCAGATGGCACCA...TGATCCTCCACCTAAAGCAGCATGCATGTTACTAACACCCTGTTTAGCCCCCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACAGGTGGAAGGGCACTTCAAACTCTaGTGTGGTCCTGTCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLETAWVRGEKGPKSQVEGHFKL*CGPVWL Trigger: GAGCCAGACAGGACCACAGCAGAGTTTGAAGTGCCC...TTCCACCTGTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR GCA 90 bp | TCGGGGGCTAAACAGGGTGTTAGTAACATGCATGCTGCTTTAGGTGGAGGATCACACTCTGCAGCCCATTaGCCAGAGTGGCCTCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SGAKQGVSNMHAALGGGSHSAAH*PEWPLL Trigger: TAGAAGAGGCCACTCTGGGCAATGGGCTGCAGAGTG...TGATCCTCCACCTAAAGCAGCATGCATGTTACTAACACCCTGTTTAGCCCCCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR CCA 90 bp | GGTGAGAAGGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCCTGCAAAGTCTCGATaGTCATTTTCAGACGCATAC | + |
|
Preference number: 4 (lower is better) Translates to: GEKGPKSQVEAICSGQQSPAKSR*SFSDAY Trigger: GTATGCGTCTGAAAATGACCATCGAGACTTTGCAGG...GCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCCTTCTCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR CCA 90 bp | AACATGCATGCTGCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGCTCTCGAGCAAAAGCTaGATCAGTCTCCAGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: NMHAALGGGSEVGFGFGELSSKS*ISLQDP Trigger: AGGGTCCTGGAGACTGATCCAGCTTTTGCTCGAGAG...CTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGCAGCATGCATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR TCA 90 bp | GACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACAGGTGACAGACGCACCAACATaGGAGGCCAAGAAAAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: DFLETAWVRGEKGPKSQVTDAPT*EAKKRV Trigger: CACTCTTTTCTTGGCCTCTCATGTTGGTGCGTCTGT...CACCTGTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR TCA 90 bp | ATTTTTCTGAGTATAAGCAGAGAGTCGGGGGCTAAACAGGGTGTTAGTAACATGAGCCTGGGCAATCCTTaGCACATCCTGGCCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IFLSISRESGAKQGVSNMSLGNP*HILAPS Trigger: GCTGGGGGCCAGGATGTGTCAAGGATTGCCCAGGCT...CATGTTACTAACACCCTGTTTAGCCCCCGACTCTCTGCTTATACTCAGAAAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR TCA 90 bp | GCTAAACAGGGTGTTAGTAACATGCATGCTGCTTTAGGTGGAGGATCAGAAGTGCCCAGGAGGGTACAGTaGTACAGTCGCACATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AKQGVSNMHAALGGGSEVPRRVQ*YSRTSS Trigger: GCTGGATGTGCGACTGTATCACTGTACCCTCCTGGG...CACTTCTGATCCTCCACCTAAAGCAGCATGCATGTTACTAACACCCTGTTTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR TCA 90 bp | TTAAAGACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACCCCAGGAGGGTACAGTaGTACAGTCGCACATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKTFLRQLGSEVRRVQSHPRRVQ*YSRTSS Trigger: GCTGGATGTGCGACTGTATCACTGTACCCTCCTGGG...GTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTCTTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR TCA 90 bp | AACATGCATGCTGCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGTGCTGCCACATGAGTTaGATCTCAGAGTCTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NMHAALGGGSEVGFGFGECCHMS*ISESER Trigger: CCTCTCAGACTCTGAGATTCAACTCATGTGGCAGCA...CTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGCAGCATGCATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR TCA 90 bp | TTTATTTTTCTGAGTATAAGCAGAGAGTCGGGGGCTAAACAGGGTGTTAGTAACCCACTGTGGGTCTCCTaGGCCCCCGGCCACCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FIFLSISRESGAKQGVSNPLWVS*APGHLN Trigger: ATTCAGGTGGCCGGGGGCTCAGGAGACCCACAGTGG...GTTACTAACACCCTGTTTAGCCCCCGACTCTCTGCTTATACTCAGAAAAATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR TCA 90 bp | AACATGCATGCTGCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGTATAGACGCTGTAGTTaGGGGACTCAATGGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: NMHAALGGGSEVGFGFGEYRRCS*GTQWPS Trigger: GGATGGCCATTGAGTCCCTCAACTACAGCGTCTATA...CTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGCAGCATGCATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR GCA 90 bp | ATTTTTCTGAGTATAAGCAGAGAGTCGGGGGCTAAACAGGGTGTTAGTAACATGGCCGAAAGAAGGCACTaGCCAGGGGGCTGGCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: IFLSISRESGAKQGVSNMAERRH*PGGWPL Trigger: TAGAGGCCAGCCCCCTGGGCAGTGCCTTCTTTCGGC...CATGTTACTAACACCCTGTTTAGCCCCCGACTCTCTGCTTATACTCAGAAAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR GCA 90 bp | TCGGGGGCTAAACAGGGTGTTAGTAACATGCATGCTGCTTTAGGTGGAGGATCACCCAAAATGACCAGGTaGACATGCTTCCTGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SGAKQGVSNMHAALGGGSPKMTR*TCFLAL Trigger: CAGTGCCAGGAAGCATGTGCACCTGGTCATTTTGGG...TGATCCTCCACCTAAAGCAGCATGCATGTTACTAACACCCTGTTTAGCCCCCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACAGGTGGAACCCAAAATGACCAGGTaGACATGCTTCCTGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: FLETAWVRGEKGPKSQVEPKMTR*TCFLAL Trigger: CAGTGCCAGGAAGCATGTGCACCTGGTCATTTTGGG...TTCCACCTGTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR GCA 90 bp | GCTAAACAGGGTGTTAGTAACATGCATGCTGCTTTAGGTGGAGGATCAGAAGTGCTCTCTAGCCAGGGCTaGAGCAAAGGCTCAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: AKQGVSNMHAALGGGSEVLSSQG*SKGSGQ Trigger: CTGTCCTGAGCCTTTGCTGCAGCCCTGGCTAGAGAG...CACTTCTGATCCTCCACCTAAAGCAGCATGCATGTTACTAACACCCTGTTTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CCA 90 bp | TTAAAGACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACGGTGCACATGCTTCCTaGCACTGGCTTCCTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LKTFLRQLGSEVRRVQSHGAHAS*HWLPLQ Trigger: CTGGAGAGGAAGCCAGTGCCAGGAAGCATGTGCACC...GTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTCTTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CCA 90 bp | TCGGGGGCTAAACAGGGTGTTAGTAACATGCATGCTGCTTTAGGTGGAGGATCAACTAAAGGAGACCAGTaGGGAGACCACAAGCTGACG | + |
|
Preference number: 4 (lower is better) Translates to: SGAKQGVSNMHAALGGGSTKGDQ*GDHKLT Trigger: CGTCAGCTTGTGGTCTCCCCACTGGTCTCCTTTAGT...TGATCCTCCACCTAAAGCAGCATGCATGTTACTAACACCCTGTTTAGCCCCCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR TCA 90 bp | GCTAAACAGGGTGTTAGTAACATGCATGCTGCTTTAGGTGGAGGATCAGAAGTGCCTGGGCACTGTTCCTaGCAGCTCTGTCCAAAACGA | + |
|
Preference number: 4 (lower is better) Translates to: AKQGVSNMHAALGGGSEVPGHCS*QLCPKR Trigger: TCGTTTTGGACAGAGCTGTCAGGAACAGTGCCCAGG...CACTTCTGATCCTCCACCTAAAGCAGCATGCATGTTACTAACACCCTGTTTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR TCA 90 bp | ATAATATTGGGGTGGTGTCCTAGTTTGCACAGAACTTCTAGTTCACCTGCAAAGCCGGGAGGCAGAAGGTaGGACCTCTACAACCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IILGWCPSLHRTSSSPAKPGGRR*DLYNLL Trigger: CAGCAGGTTGTAGAGGTCTCACCTTCTGCCTCCCGG...CTTTGCAGGTGAACTAGAAGTTCTGTGCAAACTAGGACACCACCCCAATATTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| CDS-3UTR TCA 90 bp | GCTAAACAGGGTGTTAGTAACATGCATGCTGCTTTAGGTGGAGGATCAGAAGTGCAAGTGCCACCATTTTaGCACTGGCACTGGAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: AKQGVSNMHAALGGGSEVQVPPF*HWHWRR Trigger: TCGCCTCCAGTGCCAGTGTCAAAATGGTGGCACTTG...CACTTCTGATCCTCCACCTAAAGCAGCATGCATGTTACTAACACCCTGTTTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCTGTGGGGTCAGTCACAGTCACTCTAGAGTATAATTTGCTTTGTGGATCCGGAAGGTGCGCACGATaGGATCATCCTTCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RAVGSVTVTLEYNLLCGSGRCAR*DHPSPA Trigger: TGCTGGAGAAGGATGATCGCATCGTGCGCACCTTCC...GGATCCACAAAGCAAATTATACTCTAGAGTGACTGTGACTGACCCCACAGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTTCTGAGTATAAGCAGAGAGTCGGGGGCTAAACAGGGTGTTAGTAACATGTCACAGTGGACTCCATaGCACCCAGAGGGGCAGACG | + |
|
Preference number: 4 (lower is better) Translates to: IFLSISRESGAKQGVSNMSQWTP*HPEGQT Trigger: CGTCTGCCCCTCTGGGTGGCATGGAGTCCACTGTGA...CATGTTACTAACACCCTGTTTAGCCCCCGACTCTCTGCTTATACTCAGAAAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR GCA 90 bp | TTAAAGACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACTGGTGCCATCTGGCTTaGGAAGTTTCATGCTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LKTFLRQLGSEVRRVQSHWCHLA*EVSCCP Trigger: GGGGCAGCATGAAACTTCGCAAGCCAGATGGCACCA...GTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTCTTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CCA 90 bp | ATTAAAGACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCAGGTGCACATGCTTCCTaGCACTGGCTTCCTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IKDFLETAWVRGEKGPKSGAHAS*HWLPLQ Trigger: CTGGAGAGGAAGCCAGTGCCAGGAAGCATGTGCACC...TGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTCTTTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CCA 90 bp | TCGGGGGCTAAACAGGGTGTTAGTAACATGCATGCTGCTTTAGGTGGAGGATCATCTGACTTTTCACAGTaGACTCCATGCCACCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGAKQGVSNMHAALGGGSSDFSQ*TPCHPE Trigger: CTCTGGGTGGCATGGAGTCCACTGTGAAAAGTCAGA...TGATCCTCCACCTAAAGCAGCATGCATGTTACTAACACCCTGTTTAGCCCCCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CCA 90 bp | TCGGGGGCTAAACAGGGTGTTAGTAACATGCATGCTGCTTTAGGTGGAGGATCACCCCAAGAGTCAAACTaGGCACTTCAAACTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SGAKQGVSNMHAALGGGSPQESN*ALQTLL Trigger: CAGCAGAGTTTGAAGTGCCCAGTTTGACTCTTGGGG...TGATCCTCCACCTAAAGCAGCATGCATGTTACTAACACCCTGTTTAGCCCCCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| 3UTR CAA 72 bp | CCTCGGTTCTCACAGGCCCCCAAGAGGTTGATAATATaGGGGTGGTGTCCTAGTTTGCACAGAACTTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PRFSQAPKRLII*GWCPSLHRTSS Trigger: ACTAGAAGTTCTGTGCAAACTAGGACACCACCCCAATATTATCAACCTCTTGGGGGCCTGTGAGAACCGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| CDS-3UTR TCA 90 bp | AACATGCATGCTGCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGACTGTAGATGCCACTTaGTGGTGGCTGTACATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NMHAALGGGSEVGFGFGETVDAT*WWLYIL Trigger: CAAAATGTACAGCCACCATCAAGTGGCATCTACAGT...CTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGCAGCATGCATGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR TCA 90 bp | TTTATTTTTCTGAGTATAAGCAGAGAGTCGGGGGCTAAACAGGGTGTTAGTAACCACAGCCTCGCACGATaGGCCGAAAGAAGGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: FIFLSISRESGAKQGVSNHSLAR*AERRHC Trigger: GCAGTGCCTTCTTTCGGCTCATCGTGCGAGGCTGTG...GTTACTAACACCCTGTTTAGCCCCCGACTCTCTGCTTATACTCAGAAAAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR TCA 90 bp | TTTATTTTTCTGAGTATAAGCAGAGAGTCGGGGGCTAAACAGGGTGTTAGTAACGAGCCCCCGGCCACCTaGATCTCCACGATGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: FIFLSISRESGAKQGVSNEPPAT*ISTMYL Trigger: CAAGTACATCGTGGAGATTCAGGTGGCCGGGGGCTC...GTTACTAACACCCTGTTTAGCCCCCGACTCTCTGCTTATACTCAGAAAAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
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| CDS-3UTR GCA 90 bp | ATTAAAGACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCAGGAAGGTGCGCACGATaGGATCATCCTTCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IKDFLETAWVRGEKGPKSGRCAR*DHPSPA Trigger: TGCTGGAGAAGGATGATCGCATCGTGCGCACCTTCC...TGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTCTTTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR CCA 90 bp | TTAAAGACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACAAACAGGTGTGCCCCTaGGCTGTTGTGCACATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LKTFLRQLGSEVRRVQSHKQVCP*AVVHIE Trigger: CTCTATGTGCACAACAGCCCAGGGGCACACCTGTTT...GTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTCTTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR CCA 90 bp | GCTAAACAGGGTGTTAGTAACATGCATGCTGCTTTAGGTGGAGGATCAGAAGTGTGGCCTCTAGGTAGGTaGCACTGTAGATGCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: AKQGVSNMHAALGGGSEVWPLGR*HCRCHL Trigger: CAAGTGGCATCTACAGTGCCACCTACCTAGAGGCCA...CACTTCTGATCCTCCACCTAAAGCAGCATGCATGTTACTAACACCCTGTTTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR CCA 90 bp | AAGACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACAGGATGTCACATTCTCACTaGGATCCACCACAATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KTFLRQLGSEVRRVQSHRMSHSH*DPPQWQ Trigger: CTGCCATTGTGGTGGATCCCAGTGAGAATGTGACAT...CCTGTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR TCA 90 bp | GCTAAACAGGGTGTTAGTAACATGCATGCTGCTTTAGGTGGAGGATCAGAAGTGTGTTCACCGTGTGTGTaGCCTTGTCTGGAAACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AKQGVSNMHAALGGGSEVCSPCV*PCLETG Trigger: ACCTGTTTCCAGACAAGGTCACACACACGGTGAACA...CACTTCTGATCCTCCACCTAAAGCAGCATGCATGTTACTAACACCCTGTTTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR TCA 90 bp | ATTTTTCTGAGTATAAGCAGAGAGTCGGGGGCTAAACAGGGTGTTAGTAACATGGCATCGTCCCTATGTTaGACTCCACCTCTGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IFLSISRESGAKQGVSNMASSLC*TPPLWP Trigger: TGGCCACAGAGGTGGAGTTCAACATAGGGACGATGC...CATGTTACTAACACCCTGTTTAGCCCCCGACTCTCTGCTTATACTCAGAAAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR TCA 90 bp | ATTAAAGACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCAGCAGCCAGGTCCCTGTaGATGAACTGCTTCTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: IKDFLETAWVRGEKGPKSAARSL*MNCFSL Trigger: TAGTGAGAAGCAGTTCATTCACAGGGACCTGGCTGC...TGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTCTTTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR CCA 90 bp | TTTATTTTTCTGAGTATAAGCAGAGAGTCGGGGGCTAAACAGGGTGTTAGTAACGTCAGGAAGAAACGCTaGGGGTCTGTGATGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FIFLSISRESGAKQGVSNVRKKR*GSVMRR Trigger: CCTGCGCATCACAGACCCCCAGCGTTTCTTCCTGAC...GTTACTAACACCCTGTTTAGCCCCCGACTCTCTGCTTATACTCAGAAAAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CCA 90 bp | ATAATATTGGGGTGGTGTCCTAGTTTGCACAGAACTTCTAGTTCACCTGCAAAGTCCATGCAGGCAGCCTaGGCAATCCTTGACACATCC | + |
|
Preference number: 4 (lower is better) Translates to: IILGWCPSLHRTSSSPAKSMQAA*AILDTS Trigger: GGATGTGTCAAGGATTGCCCAGGCTGCCTGCATGGA...CTTTGCAGGTGAACTAGAAGTTCTGTGCAAACTAGGACACCACCCCAATATTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTTTTCTGAGTATAAGCAGAGAGTCGGGGGCTAAACAGGGTGTTAGTAACGGTGCCAGTGAATCCTaGGGGACACACACATTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FIFLSISRESGAKQGVSNGASES*GTHTFA Trigger: GGCGAATGTGTGTGTCCCCCAGGATTCACTGGCACC...GTTACTAACACCCTGTTTAGCCCCCGACTCTCTGCTTATACTCAGAAAAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR CCA 90 bp | GCTAAACAGGGTGTTAGTAACATGCATGCTGCTTTAGGTGGAGGATCAGAAGTGCTTCAAACTCTGCTGTaGTCCTGTCTGGCTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: AKQGVSNMHAALGGGSEVLQTLL*SCLAPQ Trigger: TTGTGGAGCCAGACAGGACCACAGCAGAGTTTGAAG...CACTTCTGATCCTCCACCTAAAGCAGCATGCATGTTACTAACACCCTGTTTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR GCA 90 bp | ATTAAAGACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCAAGGTGGCACTGTAGATaGCACTTGATGGTGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IKDFLETAWVRGEKGPKSRWHCR*HLMVAV Trigger: TACAGCCACCATCAAGTGGCATCTACAGTGCCACCT...TGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTCTTTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR CCA 90 bp | ATTAAAGACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCAAGGCCAAGAAAAGAGTaGGGAGCAGCAAAGAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: IKDFLETAWVRGEKGPKSRPRKE*GAAKRI Trigger: GATCCTCTTTGCTGCTCCCCACTCTTTTCTTGGCCT...TGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTCTTTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR CCA 90 bp | TTTATTTTTCTGAGTATAAGCAGAGAGTCGGGGGCTAAACAGGGTGTTAGTAACTCCATGCAGGCAGCCTaGGCAATCCTTGACACATCC | + |
|
Preference number: 4 (lower is better) Translates to: FIFLSISRESGAKQGVSNSMQAA*AILDTS Trigger: GGATGTGTCAAGGATTGCCCAGGCTGCCTGCATGGA...GTTACTAACACCCTGTTTAGCCCCCGACTCTCTGCTTATACTCAGAAAAATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR CCA 90 bp | ATTAAAGACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCATGCTGTGGTCCTGTCTaGCTCCACAATGACTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IKDFLETAWVRGEKGPKSCCGPV*LHNDFG Trigger: ACCAAAGTCATTGTGGAGCCAGACAGGACCACAGCA...TGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTCTTTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR CCA 90 bp | GACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACAGGTGTTGATAATATTGGGGTaGTGTCCTAGTTTGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: DFLETAWVRGEKGPKSQVLIILG*CPSLHR Trigger: TCTGTGCAAACTAGGACACCACCCCAATATTATCAA...CACCTGTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
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| CDS-3UTR CCA 90 bp | ATTAAAGACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACAAAGTCTGCAATCTTaGAGGCCAGGTTCTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: IKDFLETAWVRGEKGPKSQSLQS*RPGSLR Trigger: TCGGAGAGAACCTGGCCTCCAAGATTGCAGACTTTG...TGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTCTTTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR TCA 90 bp | TTTATTTTTCTGAGTATAAGCAGAGAGTCGGGGGCTAAACAGGGTGTTAGTAACATCCTGACTGGTAAGTaGAGGTGCGTCTCCGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: FIFLSISRESGAKQGVSNILTGK*RCVSDV Trigger: TACATCGGAGACGCACCTTCACTTACCAGTCAGGAT...GTTACTAACACCCTGTTTAGCCCCCGACTCTCTGCTTATACTCAGAAAAATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
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| CDS-3UTR GCA 90 bp | ATTTTTCTGAGTATAAGCAGAGAGTCGGGGGCTAAACAGGGTGTTAGTAACATGCAGATCACGTCAGTCTaGTTTTCCTTGTGCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: IFLSISRESGAKQGVSNMQITSV*FSLCTW Trigger: CCATGTGCACAAGGAAAAGCAGACTGACGTGATCTG...CATGTTACTAACACCCTGTTTAGCCCCCGACTCTCTGCTTATACTCAGAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR GCA 90 bp | TTTATTTTTCTGAGTATAAGCAGAGAGTCGGGGGCTAAACAGGGTGTTAGTAACAGAAAGGCCAAAGTCTaGAATCTTGGAGGCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FIFLSISRESGAKQGVSNRKAKV*NLGGQV Trigger: AACCTGGCCTCCAAGATTGCAGACTTTGGCCTTTCT...GTTACTAACACCCTGTTTAGCCCCCGACTCTCTGCTTATACTCAGAAAAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
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| CDS-3UTR CCA 90 bp | TTTATTTTTCTGAGTATAAGCAGAGAGTCGGGGGCTAAACAGGGTGTTAGTAACATGTCACATTCTCACTaGGATCCACCACAATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FIFLSISRESGAKQGVSNMSHSH*DPPQWQ Trigger: CTGCCATTGTGGTGGATCCCAGTGAGAATGTGACAT...GTTACTAACACCCTGTTTAGCCCCCGACTCTCTGCTTATACTCAGAAAAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS GCA 90 bp | TGCGTGCCAGGTACAGGGGCTGCCCAGGCGGGAAGGTGCGCACGATaGGATCATCCTTCTCCAGCAGCAGGGGCGGGTCCGAGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CVPGTGAAQAGRCAR*DHPSPAAGAGPSSS Trigger: GGAGGAGCTCGGACCCGCCCCTGCTGCTGGAGAAGGATGATCGCATCGTGCGCACCTTCCCGCCTGGGCAGCCCCTGTACCTGGCACGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS GCA 90 bp | GAGAACCGTTGCGTGCCAGGTACAGGGGCTGCCCAGGCGGGAAGGTaGGCACGATGCGATCATCCTTCTCCAGCAGCAGGGGCGGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: ENRCVPGTGAAQAGR*ARCDHPSPAAGAGP Trigger: CGGACCCGCCCCTGCTGCTGGAGAAGGATGATCGCATCGTGCGCACCTTCCCGCCTGGGCAGCCCCTGTACCTGGCACGCAACGGTTCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS GCA 90 bp | GCGATCATCCTTCTCCAGCAGCAGGGGCGGGTCCGAGCTCCTCCCTaGTCCGGCCTCACCAGACACGCAGGTCAGGAAGAAACGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AIILLQQQGRVRAPP*SGLTRHAGQEETLG Trigger: CCCCAGCGTTTCTTCCTGACCTGCGTGTCTGGTGAGGCCGGAGCAGGGAGGAGCTCGGACCCGCCCCTGCTGCTGGAGAAGGATGATCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CCA 90 bp | ACAGACACCTCCATGCAGGCAGCCTGGGCAATCCTTGACACATCCTaGCCCCCAGCGTCCAGCCCCACAGCCTCGCACGATGAGCCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TDTSMQAAWAILDTS*PPASSPTASHDEPK Trigger: TTTCGGCTCATCGTGCGAGGCTGTGGGGCTGGACGCTGGGGGCCAGGATGTGTCAAGGATTGCCCAGGCTGCCTGCATGGAGGTGTCTGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS TCA 90 bp | AGAAGACGCCTACCAAATCCGAGGGCTTGGAGAAGCCCCTCAGCGTaGCCTGGTGAGAACCGTTGCGTGCCAGGTACAGGGGCTGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRRLPNPRAWRSPSA*PGENRCVPGTGAAQ Trigger: CTGGGCAGCCCCTGTACCTGGCACGCAACGGTTCTCACCAGGTCACGCTGAGGGGCTTCTCCAAGCCCTCGGATTTGGTAGGCGTCTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS GCA 90 bp | GAAACAGGTGTGCCCCTGGGCTGTTGTGCACATAGAGAACTCGAGTaGGCCGCGCGCCAGCACCACCCACACAGGAGAAGACGCCTACCA | + |
|
Preference number: 5 (lower is better) Translates to: ETGVPLGCCAHRELE*AARQHHPHRRRRLP Trigger: TGGTAGGCGTCTTCTCCTGTGTGGGTGGTGCTGGCGCGCGGCGCACTCGAGTTCTCTATGTGCACAACAGCCCAGGGGCACACCTGTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CCA 90 bp | CAGGCGGACAGAGGAGATGGGTCCATCCCCACTAAAGGAGACCAGTaGGGAGACCACAAGCTGACGGCTCTGCTTGGCCAGGAGTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: QADRGDGSIPTKGDQ*GDHKLTALLGQESR Trigger: CCTCGACTCCTGGCCAAGCAGAGCCGTCAGCTTGTGGTCTCCCCACTGGTCTCCTTTAGTGGGGATGGACCCATCTCCTCTGTCCGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS TCA 90 bp | TACAGTGATACAGTCGCACATCCAGCTGGTAGTGGGTGCCCGGCGTaGGTCCAGTCAGGAGGGCAGTGCGGGCCTGGGGGAATGAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: YSDTVAHPAGSGCPA*VQSGGQCGPGGMRC Trigger: ACATCTCATTCCCCCAGGCCCGCACTGCCCTCCTGACTGGACTCACGCCGGGCACCCACTACCAGCTGGATGTGCGACTGTATCACTGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CCA 90 bp | ACGACCCTCCCTGCAGGCCTGCTCACAGCGGGTGCCAGTGAATCCTaGGGGACACACACATTCGCCATCATGGTCATGACAGACACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TTLPAGLLTAGASES*GTHTFAIMVMTDTS Trigger: GGAGGTGTCTGTCATGACCATGATGGCGAATGTGTGTGTCCCCCAGGATTCACTGGCACCCGCTGTGAGCAGGCCTGCAGGGAGGGTCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS TCA 90 bp | TTTCACAGTGGACTCCATGCCACCCAGAGGGGCAGACGCAGCCGCTaGACCGGTCACAAGTGCCACCATTTTGACACTGGCACTGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FHSGLHATQRGRRSR*TGHKCHHFDTGTGG Trigger: GCCTCCAGTGCCAGTGTCAAAATGGTGGCACTTGTGACCGGTTCAGCGGCTGCGTCTGCCCCTCTGGGTGGCATGGAGTCCACTGTGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS GCA 90 bp | GCGAAGTTTCATGCTGCCCCGCACTGGGAAGGGATTCCCGGCAGCTaGACAGTTGATCCGGGGCATCGTCCCTATGTTGAACTCCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: AKFHAAPHWEGIPGS*TVDPGHRPYVELHL Trigger: GAGGTGGAGTTCAACATAGGGACGATGCCCCGGATCAACTGTGCAGCTGCCGGGAATCCCTTCCCAGTGCGGGGCAGCATGAAACTTCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS GCA 90 bp | CGGAGCCTGTCAGGACCCTCCACGTGCCAGCTCTCTAGCCAGGGCTaGAGCAAAGGCTCAGGACAGTCAGTAGTCATAAGGGCAGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RSLSGPSTCQLSSQG*SKGSGQSVVIRAEG Trigger: ACCTTCTGCCCTTATGACTACTGACTGTCCTGAGCCTTTGCTGCAGCCCTGGCTAGAGAGCTGGCACGTGGAGGGTCCTGACAGGCTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CCA 90 bp | ACATTCGCCATCATGGTCATGACAGACACCTCCATGCAGGCAGCCTaGGCAATCCTTGACACATCCTGGCCCCCAGCGTCCAGCCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: TFAIMVMTDTSMQAA*AILDTSWPPASSPT Trigger: TGTGGGGCTGGACGCTGGGGGCCAGGATGTGTCAAGGATTGCCCAGGCTGCCTGCATGGAGGTGTCTGTCATGACCATGATGGCGAATGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS CCA 90 bp | GGGATCCGGGAGGCAGAAGGTGAGACCTCTACAACCTGCTGTGCCTaGGCACTGTTCCTGACAGCTCTGTCCAAAACGACCCTCCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GIREAEGETSTTCCA*ALFLTALSKTTLPA Trigger: TGCAGGGAGGGTCGTTTTGGACAGAGCTGTCAGGAACAGTGCCCAGGCACAGCAGGTTGTAGAGGTCTCACCTTCTGCCTCCCGGATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS CCA 90 bp | AAGCATGGTGCCATCTGGCTTGCGAAGTTTCATGCTGCCCCGCACTaGGAAGGGATTCCCGGCAGCTGCACAGTTGATCCGGGGCATCGT | + |
|
Preference number: 5 (lower is better) Translates to: KHGAIWLAKFHAAPH*EGIPGSCTVDPGHR Trigger: ACGATGCCCCGGATCAACTGTGCAGCTGCCGGGAATCCCTTCCCAGTGCGGGGCAGCATGAAACTTCGCAAGCCAGATGGCACCATGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | GGAAGGGTAGCTATGGGAACAGCTGGCAAGAAAGGGGATGCCTGTTTCCCTCCCCAGCCTGGGCAATCCTaGACACATCCTGGCCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GRVAMGTAGKKGDACFPPQPGQS*THPGPQ Trigger: CTGGGGGCCAGGATGTGTCAAGGATTGCCCAGGCTG...GGGAGGGAAACAGGCATCCCCTTTCTTGCCAGCTGTTCCCATAGCTACCCTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | GCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGCCGCAGAGAGGACAGCCTGGGCAATCCTaGACACATCCTGGCCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALGGGSEVGFGFGEPQRGQPGQS*THPGPQ Trigger: CTGGGGGCCAGGATGTGTCAAGGATTGCCCAGGCTG...TCCTCTCTGCGGCTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCTGGTGGGGCATCGTCCCTATGTaGAACTCCACCTCTGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QSHRWKQFAPASRARGWWGIVPM*NSTSVA Trigger: GGCCACAGAGGTGGAGTTCAACATAGGGACGATGCC...CCACCAGCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGTGGCAGAGACGGAACCTACCACAGCCAGGACCAGCTGCTGATCCAGGCCACTTTGACATTGACCTaGAAGCGCCGGCTGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AGGRDGTYHSQDQLLIQATLTLT*KRRLSW Trigger: CCAAGACAGCCGGCGCTTCAAGGTCAATGTCAAAGT...GGCCTGGATCAGCAGCTGGTCCTGGCTGTGGTAGGTTCCGTCTCTGCCACCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | GCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGCCGCAGAGAGGACATGGCCCGGATCACTaGGCCAAAGTTGCCCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ALGGGSEVGFGFGEPQRGHGPDH*AKVALP Trigger: GGGGAGGGCAACTTTGGCCAAGTGATCCGGGCCATG...TCCTCTCTGCGGCTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS TCA 90 bp | GTCCAAAACGACCCTCCCTGCAGGCCTGCTCACAGCGGGTGCCAGTaGATCCTGGGGGACACACACATTCGCCATCATGGTCATGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: VQNDPPCRPAHSGCQ*ILGDTHIRHHGHDR Trigger: TCTGTCATGACCATGATGGCGAATGTGTGTGTCCCCCAGGATTCACTGGCACCCGCTGTGAGCAGGCCTGCAGGGAGGGTCGTTTTGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS TCA 90 bp | CAGAAGGTGAGACCTCTACAACCTGCTGTGCCTGGGCACTGTTCCTaGCAGCTCTGTCCAAAACGACCCTCCCTGCAGGCCTGCTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: QKVRPLQPAVPGHCS*QLCPKRPSLQACSQ Trigger: CTGTGAGCAGGCCTGCAGGGAGGGTCGTTTTGGACAGAGCTGTCAGGAACAGTGCCCAGGCACAGCAGGTTGTAGAGGTCTCACCTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS TCA 90 bp | AGCCAGATCCACAGGAACAGCCATAGGGATCCGGGAGGCAGAAGGTaGGACCTCTACAACCTGCTGTGCCTGGGCACTGTTCCTGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SQIHRNSHRDPGGRR*DLYNLLCLGTVPDS Trigger: GCTGTCAGGAACAGTGCCCAGGCACAGCAGGTTGTAGAGGTCTCACCTTCTGCCTCCCGGATCCCTATGGCTGTTCCTGTGGATCTGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS TCA 90 bp | ATGGGTCCATCCCCACTAAAGGAGACCAGTGGGGAGACCACAAGCTaGCGGCTCTGCTTGGCCAGGAGTCGAGGTGCAGTCAAAGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: MGPSPLKETSGETTS*RLCLARSRGAVKGT Trigger: AGTGCCTTTGACTGCACCTCGACTCCTGGCCAAGCAGAGCCGTCAGCTTGTGGTCTCCCCACTGGTCTCCTTTAGTGGGGATGGACCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS CCA 90 bp | CTCCCTGCTCCGGCCTCACCAGACACGCAGGTCAGGAAGAAACGCTaGGGGTCTGTGATGCGCAGGTTGGCCAGCAATGTTAAGTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: LPAPASPDTQVRKKR*GSVMRRLASNVKST Trigger: TGTTGACTTAACATTGCTGGCCAACCTGCGCATCACAGACCCCCAGCGTTTCTTCCTGACCTGCGTGTCTGGTGAGGCCGGAGCAGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS CCA 90 bp | GGCACTGGGGGTACTTTGACATTGACCTTGAAGCGCCGGCTGTCTTaGCCACCAGAAGTCGATACGCGGCATTCCCAGAACCCACTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GTGGTLTLTLKRRLS*PPEVDTRHSQNPLS Trigger: GGACAGTGGGTTCTGGGAATGCCGCGTATCGACTTCTGGTGGCCAAGACAGCCGGCGCTTCAAGGTCAATGTCAAAGTACCCCCAGTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | GGTGAGAAGGGTCCAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCACCAAATCCGAGGGCTaGGAGAAGCCCCTCAGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GEKGPKSQVEAICSGQQSTKSEG*EKPLSV Trigger: CACGCTGAGGGGCTTCTCCAAGCCCTCGGATTTGGT...GCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTGGACCCTTCTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | ATCTCCACGATGTACTTGGATATAGGCCCAGACGGAGCCTCGGGATGCTGCCACACCAAATCCGAGGGCTaGGAGAAGCCCCTCAGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: ISTMYLDIGPDGASGCCHTKSEG*EKPLSV Trigger: CACGCTGAGGGGCTTCTCCAAGCCCTCGGATTTGGT...GTGGCAGCATCCCGAGGCTCCGTCTGGGCCTATATCCAAGTACATCGTGGAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | GGTGAGGCAGGTGGCAGAGACGGAACCTACCACAGCCAGGACCAGCTGCTGATCACAGCAGTGTCACCTTaGTTCACCGTGTGTGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: GEAGGRDGTYHSQDQLLITAVSP*FTVCVT Trigger: GGTCACACACACGGTGAACAAAGGTGACACTGCTGT...GATCAGCAGCTGGTCCTGGCTGTGGTAGGTTCCGTCTCTGCCACCTGCCTCACC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | TGGTATCTTCTATCTTCCCCATTCATCCTGGGTGCTCTCCTCGTCCACCCAGTCCCGGCAGCTGCACAGTaGATCCGGGGCATCGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: WYLLSSPFILGALLVHPVPAAAQ*IRGIVP Trigger: AGGGACGATGCCCCGGATCAACTGTGCAGCTGCCGG...GACTGGGTGGACGAGGAGAGCACCCAGGATGAATGGGGAAGATAGAAGATACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| CDS TCA 90 bp | CGGCCTCACCAGACACGCAGGTCAGGAAGAAACGCTGGGGGTCTGTaGTGCGCAGGTTGGCCAGCAATGTTAAGTCAACAGACGCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: RPHQTRRSGRNAGGL*CAGWPAMLSQQTHQ Trigger: TTGGTGCGTCTGTTGACTTAACATTGCTGGCCAACCTGCGCATCACAGACCCCCAGCGTTTCTTCCTGACCTGCGTGTCTGGTGAGGCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS GCA 90 bp | ACAGCCATAGGGATCCGGGAGGCAGAAGGTGAGACCTCTACAACCTaGTGTGCCTGGGCACTGTTCCTGACAGCTCTGTCCAAAACGACC | + |
|
Preference number: 5 (lower is better) Translates to: TAIGIREAEGETSTT*CAWALFLTALSKTT Trigger: GGTCGTTTTGGACAGAGCTGTCAGGAACAGTGCCCAGGCACAGCAGGTTGTAGAGGTCTCACCTTCTGCCTCCCGGATCCCTATGGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS GCA 90 bp | TGGGGAGACCACAAGCTGACGGCTCTGCTTGGCCAGGAGTCGAGGTaGAGTCAAAGGCACTGGGGGTACTTTGACATTGACCTTGAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: WGDHKLTALLGQESR*SQRHWGYFDIDLEA Trigger: CGCTTCAAGGTCAATGTCAAAGTACCCCCAGTGCCTTTGACTGCACCTCGACTCCTGGCCAAGCAGAGCCGTCAGCTTGTGGTCTCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGTCACAGGTGGAAGCAATTTGCTCCGGCCAGCAGAGCCAGGGGCTGGTGGACAGCAGTGTCACCTTaGTTCACCGTGTGTGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: QSHRWKQFAPASRARGWWTAVSP*FTVCVT Trigger: GGTCACACACACGGTGAACAAAGGTGACACTGCTGT...CCACCAGCCCCTGGCTCTGCTGGCCGGAGCAAATTGCTTCCACCTGTGACTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGCCGCAGAGAGGGGCATCGTCCCTATGTaGAACTCCACCTCTGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CFRWRIRSGVWVWGAAERGIVPM*NSTSVA Trigger: GGCCACAGAGGTGGAGTTCAACATAGGGACGATGCC...CCTCTCTGCGGCTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | GACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACAGGTGCCGGCAGCTGCACAGTaGATCCGGGGCATCGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: DFLETAWVRGEKGPKSQVPAAAQ*IRGIVP Trigger: AGGGACGATGCCCCGGATCAACTGTGCAGCTGCCGG...CACCTGTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | CACTTCGTCATCGCAGTTTCGAGGCTGCTCCATGCGATAGCCTTGAGGCAGCTTGGGGGTACTTTGACATaGACCTTGAAGCGCCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HFVIAVSRLLHAIALRQLGGTLT*TLKRRL Trigger: CAGCCGGCGCTTCAAGGTCAATGTCAAAGTACCCCC...AAGCTGCCTCAAGGCTATCGCATGGAGCAGCCTCGAAACTGCGATGACGAAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | GGAAGGGTAGCTATGGGAACAGCTGGCAAGAAAGGGGATGCCTGTTTCCCTCCCGCCTCTTCTACTGTATaGCTCCAGTCGCCAAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: GRVAMGTAGKKGDACFPPASSTV*LQSPRP Trigger: GGGTCTTGGCGACTGGAGCAATACAGTAGAAGAGGC...GGGAGGGAAACAGGCATCCCCTTTCTTGCCAGCTGTTCCCATAGCTACCCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS GCA 90 bp | CCTGTGAATGAACTGCTTCTCACTAAGGTACTGCATGCCGTTGGCTaGATCACTGGCAAAGCGCAGCAGCTGCCGAGAGCTGAGTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PVNELLLTKVLHAVG*ITGKAQQLPRAECG Trigger: TCCACACTCAGCTCTCGGCAGCTGCTGCGCTTTGCCAGTGATGCAGCCAACGGCATGCAGTACCTTAGTGAGAAGCAGTTCATTCACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR CAA 90 bp | GGCCACCTGAATCTCCACGATGTACTTGGATATAGGCCCAGACGGAGCCTCGGGTCTGTGATGCGCAGGTaGGCCAGCAATGTTAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GHLNLHDVLGYRPRRSLGSVMRR*ASNVKS Trigger: TGACTTAACATTGCTGGCCAACCTGCGCATCACAGA...CCCGAGGCTCCGTCTGGGCCTATATCCAAGTACATCGTGGAGATTCAGGTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| CDS TCA 90 bp | CATGGGCAGAAAGCACAGCAGTGTCACCTTTGTTCACCGTGTGTGTaGCCTTGTCTGGAAACAGGTGTGCCCCTGGGCTGTTGTGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: HGQKAQQCHLCSPCV*PCLETGVPLGCCAH Trigger: ATGTGCACAACAGCCCAGGGGCACACCTGTTTCCAGACAAGGTCACACACACGGTGAACAAAGGTGACACTGCTGTGCTTTCTGCCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | GGCCACCTGAATCTCCACGATGTACTTGGATATAGGCCCAGACGGAGCCTCGGGTGGTGGCTGTACATTTaGGAGCTGCAGTTGAAAACG | + |
|
Preference number: 5 (lower is better) Translates to: GHLNLHDVLGYRPRRSLGWWLYI*ELQLKT Trigger: CGTTTTCAACTGCAGCTCCAAAATGTACAGCCACCA...CCCGAGGCTCCGTCTGGGCCTATATCCAAGTACATCGTGGAGATTCAGGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184261.8 |
||
| CDS CCA 90 bp | AAGCACAGCAGTGTCACCTTTGTTCACCGTGTGTGTGACCTTGTCTaGAAACAGGTGTGCCCCTGGGCTGTTGTGCACATAGAGAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: KHSSVTFVHRVCDLV*KQVCPWAVVHIENS Trigger: CGAGTTCTCTATGTGCACAACAGCCCAGGGGCACACCTGTTTCCAGACAAGGTCACACACACGGTGAACAAAGGTGACACTGCTGTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | AACATGCATGCTGCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGACCGTGTGTGTGACCTaGTCTGGAAACAGGTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: NMHAALGGGSEVGFGFGETVCVT*SGNRCA Trigger: GGCACACCTGTTTCCAGACAAGGTCACACACACGGT...CTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGCAGCATGCATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | TCGGGGGCTAAACAGGGTGTTAGTAACATGCATGCTGCTTTAGGTGGAGGATCATCACTCTGCAGCCCATaGCCCAGAGTGGCCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGAKQGVSNMHAALGGGSSLCSP*PRVASS Trigger: AGAAGAGGCCACTCTGGGCAATGGGCTGCAGAGTGA...TGATCCTCCACCTAAAGCAGCATGCATGTTACTAACACCCTGTTTAGCCCCCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR CAA 90 bp | AACATGCATGCTGCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGTTGAGCCCGTCCTTCTaGATCATGGCCCGGATCACT | + |
|
Preference number: 5 (lower is better) Translates to: NMHAALGGGSEVGFGFGELSPSF*IMARIT Trigger: AGTGATCCGGGCCATGATCAAGAAGGACGGGCTCAA...CTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGCAGCATGCATGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR CAA 90 bp | GGAAGGGTAGCTATGGGAACAGCTGGCAAGAAAGGGGATGCCTGTTTCCCTCCCGGGTGGTGTCCTAGTTaGCACAGAACTTCTAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GRVAMGTAGKKGDACFPPGWCPS*HRTSSS Trigger: TGAACTAGAAGTTCTGTGCAAACTAGGACACCACCC...GGGAGGGAAACAGGCATCCCCTTTCTTGCCAGCTGTTCCCATAGCTACCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR CAA 90 bp | TGCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGCCGCAGAGAGGCACTGTAGATGCCACTaGATGGTGGCTGTACATTTT | + |
|
Preference number: 5 (lower is better) Translates to: CFRWRIRSGVWVWGAAERHCRCH*MVAVHF Trigger: AAAATGTACAGCCACCATCAAGTGGCATCTACAGTG...CCTCTCTGCGGCTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | GCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGCCGCAGAGAGGACACTGTAGATGCCACTaGATGGTGGCTGTACATTTT | + |
|
Preference number: 5 (lower is better) Translates to: ALGGGSEVGFGFGEPQRGHCRCH*MVAVHF Trigger: AAAATGTACAGCCACCATCAAGTGGCATCTACAGTG...TCCTCTCTGCGGCTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | AACATGCATGCTGCTTTAGGTGGAGGATCAGAAGTGGGGTTTGGGTTTGGGGAGACTTTGACATTGACCTaGAAGCGCCGGCTGTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: NMHAALGGGSEVGFGFGETLTLT*KRRLSW Trigger: CCAAGACAGCCGGCGCTTCAAGGTCAATGTCAAAGT...CTCCCCAAACCCAAACCCCACTTCTGATCCTCCACCTAAAGCAGCATGCATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | AAGACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACAGGCCAAAGTCTGCAATCTaGGAGGCCAGGTTCTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: KTFLRQLGSEVRRVQSHRPKSAI*EARFSP Trigger: CGGAGAGAACCTGGCCTCCAAGATTGCAGACTTTGG...CCTGTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS GCA 90 bp | CCAGAACCCACTGTCCCCAAGAGTCAAACTGGGCACTTCAAACTCTaGTGTGGTCCTGTCTGGCTCCACAATGACTTTGGTAGACAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PEPTVPKSQTGHFKL*CGPVWLHNDFGRQK Trigger: CTTTTGTCTACCAAAGTCATTGTGGAGCCAGACAGGACCACAGCAGAGTTTGAAGTGCCCAGTTTGACTCTTGGGGACAGTGGGTTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS CCA 90 bp | CCGTTGTTCTTCCAGATCACGTCAGTCTGCTTTTCCTTGTGCACATaGGCAGAAAGCACAGCAGTGTCACCTTTGTTCACCGTGTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PLFFQITSVCFSLCT*AESTAVSPLFTVCV Trigger: CACACACACGGTGAACAAAGGTGACACTGCTGTGCTTTCTGCCCATGTGCACAAGGAAAAGCAGACTGACGTGATCTGGAAGAACAACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACAGGTGGAAATGGCTGCGTTCATCTaGAGCCCGTCCTTCTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: FLETAWVRGEKGPKSQVEMAAFI*SPSFLI Trigger: GATCAAGAAGGACGGGCTCAAGATGAACGCAGCCAT...TTCCACCTGTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR CAA 90 bp | TTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACAGGTGGAACAGGCCCCCAAGAGGTaGATAATATTGGGGTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FLETAWVRGEKGPKSQVEQAPKR*IILGWC Trigger: ACACCACCCCAATATTATCAACCTCTTGGGGGCCTG...TTCCACCTGTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS TCA 90 bp | GCAGTTGAAAACGCCCGTCATCGGCCTCTTGCCAGTCTAGGGTATTaGAGTAGGATCCGTTGTTCTTCCAGATCACGTCAGTCTGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: AVENARHRPLASLGY*SRIRCSSRSRQSAF Trigger: AAAAGCAGACTGACGTGATCTGGAAGAACAACGGATCCTACTTCAATACCCTAGACTGGCAAGAGGCCGATGACGGGCGTTTTCAACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS CCA 90 bp | TGTATCCTGTCTTTGGCTTCAGGTTCATTAATGTCACATTCTCACTaGGATCCACCACAATGGCAGACCAGGCAATCGTGCTGTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: CILSLASGSLMSHSH*DPPQWQTRQSCCPG Trigger: CCCAGGACAGCACGATTGCCTGGTCTGCCATTGTGGTGGATCCCAGTGAGAATGTGACATTAATGAACCTGAAGCCAAAGACAGGATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACAGGTGGAAAGCTGCACTCGGACATaGTATCCTGTCTTTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLETAWVRGEKGPKSQVESCTRT*YPVFGF Trigger: GAAGCCAAAGACAGGATACAATGTCCGAGTGCAGCT...TTCCACCTGTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | TCGGGGGCTAAACAGGGTGTTAGTAACATGCATGCTGCTTTAGGTGGAGGATCAAGCTGCACTCGGACATaGTATCCTGTCTTTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGAKQGVSNMHAALGGGSSCTRT*YPVFGF Trigger: GAAGCCAAAGACAGGATACAATGTCCGAGTGCAGCT...TGATCCTCCACCTAAAGCAGCATGCATGTTACTAACACCCTGTTTAGCCCCCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | TCGGGGGCTAAACAGGGTGTTAGTAACATGCATGCTGCTTTAGGTGGAGGATCATGGTGGCTGTACATTTaGGAGCTGCAGTTGAAAACG | + |
|
Preference number: 5 (lower is better) Translates to: SGAKQGVSNMHAALGGGSWWLYI*ELQLKT Trigger: CGTTTTCAACTGCAGCTCCAAAATGTACAGCCACCA...TGATCCTCCACCTAAAGCAGCATGCATGTTACTAACACCCTGTTTAGCCCCCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | AAGACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACAGGGGCTCCACAATGACTTaGGTAGACAAAAGCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KTFLRQLGSEVRRVQSHRGSTMT*VDKSMV Trigger: CACCATGCTTTTGTCTACCAAAGTCATTGTGGAGCC...CCTGTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | TTAAAGACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACCAGGGAGACGGCCCATaGTCTTCTTCACATACACCT | + |
|
Preference number: 5 (lower is better) Translates to: LKTFLRQLGSEVRRVQSHQGDGP*SSSHTP Trigger: AGGTGTATGTGAAGAAGACAATGGGCCGTCTCCCTG...GTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTCTTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR CAA 90 bp | TTTATTTTTCTGAGTATAAGCAGAGAGTCGGGGGCTAAACAGGGTGTTAGTAACGGGGGTACTTTGACATaGACCTTGAAGCGCCGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FIFLSISRESGAKQGVSNGGTLT*TLKRRL Trigger: CAGCCGGCGCTTCAAGGTCAATGTCAAAGTACCCCC...GTTACTAACACCCTGTTTAGCCCCCGACTCTCTGCTTATACTCAGAAAAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
||
| CDS-3UTR CAA 90 bp | ATTTTTCTGAGTATAAGCAGAGAGTCGGGGGCTAAACAGGGTGTTAGTAACATGAGGTACTGCATGCCGTaGGCTGCATCACTGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: IFLSISRESGAKQGVSNMRYCMP*AASLAK Trigger: CTTTGCCAGTGATGCAGCCAACGGCATGCAGTACCT...CATGTTACTAACACCCTGTTTAGCCCCCGACTCTCTGCTTATACTCAGAAAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
||
| CDS-3UTR CAA 90 bp | ATTTTTCTGAGTATAAGCAGAGAGTCGGGGGCTAAACAGGGTGTTAGTAACATGTCTGTGATGCGCAGGTaGGCCAGCAATGTTAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: IFLSISRESGAKQGVSNMSVMRR*ASNVKS Trigger: TGACTTAACATTGCTGGCCAACCTGCGCATCACAGA...CATGTTACTAACACCCTGTTTAGCCCCCGACTCTCTGCTTATACTCAGAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR CAA 90 bp | ATTAAAGACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCAGGCTCCACAATGACTTaGGTAGACAAAAGCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IKDFLETAWVRGEKGPKSGSTMT*VDKSMV Trigger: CACCATGCTTTTGTCTACCAAAGTCATTGTGGAGCC...TGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTCTTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS-3UTR CAA 90 bp | TTAAAGACTTTCTTGAGACAGCTTGGGTCAGAGGTGAGAAGGGTCCAAAGTCACTACTCTTTTAGCATCTaGATGGCTGCGTTCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LKTFLRQLGSEVRRVQSHYSFSI*MAAFIL Trigger: CAAGATGAACGCAGCCATCAAGATGCTAAAAGAGTA...GTGACTTTGGACCCTTCTCACCTCTGACCCAAGCTGTCTCAAGAAAGTCTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
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| CDS TCA 72 bp | ACAGTCGCACATCCAGCTGGTAGTGGGTGCCCGGCGTaGGTCCAGTCAGGAGGGCAGTGCGGGCCTGGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: TVAHPAGSGCPA*VQSGGQCGPGG Trigger: TCCCCCAGGCCCGCACTGCCCTCCTGACTGGACTCACGCCGGGCACCCACTACCAGCTGGATGTGCGACTGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS GCA 72 bp | GAAGCCCCTCAGCGTGACCTGGTGAGAACCGTTGCGTaGCAGGTACAGGGGCTGCCCAGGCGGGAAGGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: EAPQRDLVRTVA*QVQGLPRREGA Trigger: CGCACCTTCCCGCCTGGGCAGCCCCTGTACCTGGCACGCAACGGTTCTCACCAGGTCACGCTGAGGGGCTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CCA 72 bp | CCCGGCGTGAGTCCAGTCAGGAGGGCAGTGCGGGCCTaGGGGAATGAGATGTTCTCCCGCCTCTCCTGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PGVSPVRRAVRA*GNEMFSRLSCP Trigger: GGGACAGGAGAGGCGGGAGAACATCTCATTCCCCCAGGCCCGCACTGCCCTCCTGACTGGACTCACGCCGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS GCA 72 bp | TGCGTGCCAGGTACAGGGGCTGCCCAGGCGGGAAGGTaGGCACGATGCGATCATCCTTCTCCAGCAGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: CVPGTGAAQAGR*ARCDHPSPAAG Trigger: CCCTGCTGCTGGAGAAGGATGATCGCATCGTGCGCACCTTCCCGCCTGGGCAGCCCCTGTACCTGGCACGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CCA 72 bp | TCCATGCAGGCAGCCTGGGCAATCCTTGACACATCCTaGCCCCCAGCGTCCAGCCCCACAGCCTCGCACGAT | + |
|
Preference number: 6 (lower is better) Translates to: SMQAAWAILDTS*PPASSPTASHD Trigger: ATCGTGCGAGGCTGTGGGGCTGGACGCTGGGGGCCAGGATGTGTCAAGGATTGCCCAGGCTGCCTGCATGGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS GCA 72 bp | GTGCCCCTGGGCTGTTGTGCACATAGAGAACTCGAGTaGGCCGCGCGCCAGCACCACCCACACAGGAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: VPLGCCAHRELE*AARQHHPHRRR Trigger: TCTTCTCCTGTGTGGGTGGTGCTGGCGCGCGGCGCACTCGAGTTCTCTATGTGCACAACAGCCCAGGGGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS GCA 72 bp | CACTGGGATCCACCACAATGGCAGACCAGGCAATCGTaGTGTCCTGGGGCCGGTAGTGCAGGCGGACAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HWDPPQWQTRQS*CPGAGSAGGQR Trigger: CCTCTGTCCGCCTGCACTACCGGCCCCAGGACAGCACGATTGCCTGGTCTGCCATTGTGGTGGATCCCAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CCA 72 bp | AGACCAGTGGGGAGACCACAAGCTGACGGCTCTGCTTaGCCAGGAGTCGAGGTGCAGTCAAAGGCACTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RPVGRPQADGSA*PGVEVQSKALG Trigger: CCCCAGTGCCTTTGACTGCACCTCGACTCCTGGCCAAGCAGAGCCGTCAGCTTGTGGTCTCCCCACTGGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CAA 72 bp | CCCCGCACTGGGAAGGGATTCCCGGCAGCTGCACAGTaGATCCGGGGCATCGTCCCTATGTTGAACTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: PRTGKGFPAAAQ*IRGIVPMLNST Trigger: GGTGGAGTTCAACATAGGGACGATGCCCCGGATCAACTGTGCAGCTGCCGGGAATCCCTTCCCAGTGCGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CAA 90 bp | TTCATGCTGCCCCGCACTGGGAAGGGATTCCCGGCAGCTGCACAGTaGATCCGGGGCATCGTCCCTATGTTGAACTCCACCTCTGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: FMLPRTGKGFPAAAQ*IRGIVPMLNSTSVA Trigger: GGCCACAGAGGTGGAGTTCAACATAGGGACGATGCCCCGGATCAACTGTGCAGCTGCCGGGAATCCCTTCCCAGTGCGGGGCAGCATGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS GCA 72 bp | GGGATCCGGGAGGCAGAAGGTGAGACCTCTACAACCTaGTGTGCCTGGGCACTGTTCCTGACAGCTCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GIREAEGETSTT*CAWALFLTALS Trigger: GGACAGAGCTGTCAGGAACAGTGCCCAGGCACAGCAGGTTGTAGAGGTCTCACCTTCTGCCTCCCGGATCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS GCA 72 bp | CATGCTGCCCCGCACTGGGAAGGGATTCCCGGCAGCTaGACAGTTGATCCGGGGCATCGTCCCTATGTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: HAAPHWEGIPGS*TVDPGHRPYVE Trigger: TTCAACATAGGGACGATGCCCCGGATCAACTGTGCAGCTGCCGGGAATCCCTTCCCAGTGCGGGGCAGCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CCA 72 bp | GCCATCTGGCTTGCGAAGTTTCATGCTGCCCCGCACTaGGAAGGGATTCCCGGCAGCTGCACAGTTGATCCG | + |
|
Preference number: 6 (lower is better) Translates to: AIWLAKFHAAPH*EGIPGSCTVDP Trigger: CGGATCAACTGTGCAGCTGCCGGGAATCCCTTCCCAGTGCGGGGCAGCATGAAACTTCGCAAGCCAGATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CAA 90 bp | GGATTCCCGGCAGCTGCACAGTTGATCCGGGGCATCGTCCCTATGTaGAACTCCACCTCTGTGGCCATACTGAGGATCTGGGGGATCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GFPAAAQLIRGIVPM*NSTSVAILRIWGIR Trigger: CCGGATCCCCCAGATCCTCAGTATGGCCACAGAGGTGGAGTTCAACATAGGGACGATGCCCCGGATCAACTGTGCAGCTGCCGGGAATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS TCA 72 bp | AGACCTCTACAACCTGCTGTGCCTGGGCACTGTTCCTaGCAGCTCTGTCCAAAACGACCCTCCCTGCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RPLQPAVPGHCS*QLCPKRPSLQA Trigger: GGCCTGCAGGGAGGGTCGTTTTGGACAGAGCTGTCAGGAACAGTGCCCAGGCACAGCAGGTTGTAGAGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS GCA 72 bp | AAAGCATGGTGCCATCTGGCTTGCGAAGTTTCATGCTaGCCCGCACTGGGAAGGGATTCCCGGCAGCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: KAWCHLACEVSC*PALGRDSRQLH Trigger: GTGCAGCTGCCGGGAATCCCTTCCCAGTGCGGGGCAGCATGAAACTTCGCAAGCCAGATGGCACCATGCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CCA 72 bp | ATCATGGTCATGACAGACACCTCCATGCAGGCAGCCTaGGCAATCCTTGACACATCCTGGCCCCCAGCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: IMVMTDTSMQAA*AILDTSWPPAS Trigger: GGACGCTGGGGGCCAGGATGTGTCAAGGATTGCCCAGGCTGCCTGCATGGAGGTGTCTGTCATGACCATGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CCA 72 bp | AGAGGAGATGGGTCCATCCCCACTAAAGGAGACCAGTaGGGAGACCACAAGCTGACGGCTCTGCTTGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RGDGSIPTKGDQ*GDHKLTALLGQ Trigger: CTGGCCAAGCAGAGCCGTCAGCTTGTGGTCTCCCCACTGGTCTCCTTTAGTGGGGATGGACCCATCTCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CAA 90 bp | AGGCACTGGGGGTACTTTGACATTGACCTTGAAGCGCCGGCTGTCTaGGCCACCAGAAGTCGATACGCGGCATTCCCAGAACCCACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RHWGYFDIDLEAPAV*ATRSRYAAFPEPTV Trigger: GACAGTGGGTTCTGGGAATGCCGCGTATCGACTTCTGGTGGCCAAGACAGCCGGCGCTTCAAGGTCAATGTCAAAGTACCCCCAGTGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CAA 90 bp | GCCAGGAGTCGAGGTGCAGTCAAAGGCACTGGGGGTACTTTGACATaGACCTTGAAGCGCCGGCTGTCTTGGCCACCAGAAGTCGATACG | + |
|
Preference number: 6 (lower is better) Translates to: ARSRGAVKGTGGTLT*TLKRRLSWPPEVDT Trigger: CGTATCGACTTCTGGTGGCCAAGACAGCCGGCGCTTCAAGGTCAATGTCAAAGTACCCCCAGTGCCTTTGACTGCACCTCGACTCCTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CAA 90 bp | TGCTTGGCCAGGAGTCGAGGTGCAGTCAAAGGCACTGGGGGTACTTaGACATTGACCTTGAAGCGCCGGCTGTCTTGGCCACCAGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: CLARSRGAVKGTGGT*TLTLKRRLSWPPEV Trigger: GACTTCTGGTGGCCAAGACAGCCGGCGCTTCAAGGTCAATGTCAAAGTACCCCCAGTGCCTTTGACTGCACCTCGACTCCTGGCCAAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS GCA 72 bp | ACAAAAGCATGGTGCCATCTGGCTTGCGAAGTTTCATaGTGCCCCGCACTGGGAAGGGATTCCCGGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TKAWCHLACEVS*CPALGRDSRQL Trigger: CAGCTGCCGGGAATCCCTTCCCAGTGCGGGGCAGCATGAAACTTCGCAAGCCAGATGGCACCATGCTTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS GCA 72 bp | TCAGGACCCTCCACGTGCCAGCTCTCTAGCCAGGGCTaGAGCAAAGGCTCAGGACAGTCAGTAGTCATAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SGPSTCQLSSQG*SKGSGQSVVIR Trigger: CCTTATGACTACTGACTGTCCTGAGCCTTTGCTGCAGCCCTGGCTAGAGAGCTGGCACGTGGAGGGTCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CCA 72 bp | AGAAGGCACTGCCCAGGGGGCTGGCCTCTAGGTAGGTaGCACTGTAGATGCCACTTGATGGTGGCTGTACAT | + |
|
Preference number: 6 (lower is better) Translates to: RRHCPGGWPLGR*HCRCHLMVAVH Trigger: ATGTACAGCCACCATCAAGTGGCATCTACAGTGCCACCTACCTAGAGGCCAGCCCCCTGGGCAGTGCCTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CCA 72 bp | CTGCTTGGCCAGGAGTCGAGGTGCAGTCAAAGGCACTaGGGGTACTTTGACATTGACCTTGAAGCGCCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLGQESRCSQRH*GYFDIDLEAPA Trigger: AGCCGGCGCTTCAAGGTCAATGTCAAAGTACCCCCAGTGCCTTTGACTGCACCTCGACTCCTGGCCAAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CAA 72 bp | GACGCAGCCGCTGAACCGGTCACAAGTGCCACCATTTaGACACTGGCACTGGAGGCGACAATCAGCCCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: DAAAEPVTSATI*TLALEATISPK Trigger: TTTGGGGCTGATTGTCGCCTCCAGTGCCAGTGTCAAAATGGTGGCACTTGTGACCGGTTCAGCGGCTGCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS GCA 72 bp | CACAAGCTGACGGCTCTGCTTGGCCAGGAGTCGAGGTaGAGTCAAAGGCACTGGGGGTACTTTGACATTGAC | + |
|
Preference number: 6 (lower is better) Translates to: HKLTALLGQESR*SQRHWGYFDID Trigger: GTCAATGTCAAAGTACCCCCAGTGCCTTTGACTGCACCTCGACTCCTGGCCAAGCAGAGCCGTCAGCTTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS GCA 72 bp | GAACTGCTTCTCACTAAGGTACTGCATGCCGTTGGCTaGATCACTGGCAAAGCGCAGCAGCTGCCGAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ELLLTKVLHAVG*ITGKAQQLPRA Trigger: AGCTCTCGGCAGCTGCTGCGCTTTGCCAGTGATGCAGCCAACGGCATGCAGTACCTTAGTGAGAAGCAGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047421.6 |
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| CDS CCA 72 bp | GAGGCAGAAGGTGAGACCTCTACAACCTGCTGTGCCTaGGCACTGTTCCTGACAGCTCTGTCCAAAACGACC | + |
|
Preference number: 6 (lower is better) Translates to: EAEGETSTTCCA*ALFLTALSKTT Trigger: GGTCGTTTTGGACAGAGCTGTCAGGAACAGTGCCCAGGCACAGCAGGTTGTAGAGGTCTCACCTTCTGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CAA 72 bp | CGAGGTGCAGTCAAAGGCACTGGGGGTACTTTGACATaGACCTTGAAGCGCCGGCTGTCTTGGCCACCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RGAVKGTGGTLT*TLKRRLSWPPE Trigger: TTCTGGTGGCCAAGACAGCCGGCGCTTCAAGGTCAATGTCAAAGTACCCCCAGTGCCTTTGACTGCACCTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CAA 72 bp | AGGAGTCGAGGTGCAGTCAAAGGCACTGGGGGTACTTaGACATTGACCTTGAAGCGCCGGCTGTCTTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RSRGAVKGTGGT*TLTLKRRLSWP Trigger: TGGCCAAGACAGCCGGCGCTTCAAGGTCAATGTCAAAGTACCCCCAGTGCCTTTGACTGCACCTCGACTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CAA 90 bp | GGCTCCACAATGACTTTGGTAGACAAAAGCATGGTGCCATCTGGCTaGCGAAGTTTCATGCTGCCCCGCACTGGGAAGGGATTCCCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GSTMTLVDKSMVPSG*RSFMLPRTGKGFPA Trigger: TGCCGGGAATCCCTTCCCAGTGCGGGGCAGCATGAAACTTCGCAAGCCAGATGGCACCATGCTTTTGTCTACCAAAGTCATTGTGGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CCA 72 bp | GGTACTTTGACATTGACCTTGAAGCGCCGGCTGTCTTaGCCACCAGAAGTCGATACGCGGCATTCCCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: GTLTLTLKRRLS*PPEVDTRHSQN Trigger: GTTCTGGGAATGCCGCGTATCGACTTCTGGTGGCCAAGACAGCCGGCGCTTCAAGGTCAATGTCAAAGTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS TCA 72 bp | CCACTTGATGGTGGCTGTACATTTTGGAGCTGCAGTTaGAAACGCCCGTCATCGGCCTCTTGCCAGTCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: PLDGGCTFWSCS*KRPSSASCQSR Trigger: CCTAGACTGGCAAGAGGCCGATGACGGGCGTTTTCAACTGCAGCTCCAAAATGTACAGCCACCATCAAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS GCA 72 bp | GTTCACCGTGTGTGTGACCTTGTCTGGAAACAGGTGTaGCCCTGGGCTGTTGTGCACATAGAGAACTCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: VHRVCDLVWKQV*PWAVVHIENSS Trigger: ACTCGAGTTCTCTATGTGCACAACAGCCCAGGGGCACACCTGTTTCCAGACAAGGTCACACACACGGTGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS TCA 72 bp | AACGCCCGTCATCGGCCTCTTGCCAGTCTAGGGTATTaGAGTAGGATCCGTTGTTCTTCCAGATCACGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: NARHRPLASLGY*SRIRCSSRSRQ Trigger: CTGACGTGATCTGGAAGAACAACGGATCCTACTTCAATACCCTAGACTGGCAAGAGGCCGATGACGGGCGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CCA 72 bp | AGTGTCACCTTTGTTCACCGTGTGTGTGACCTTGTCTaGAAACAGGTGTGCCCCTGGGCTGTTGTGCACATA | + |
|
Preference number: 6 (lower is better) Translates to: SVTFVHRVCDLV*KQVCPWAVVHI Trigger: TATGTGCACAACAGCCCAGGGGCACACCTGTTTCCAGACAAGGTCACACACACGGTGAACAAAGGTGACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CAA 72 bp | ATGACTTTGGTAGACAAAAGCATGGTGCCATCTGGCTaGCGAAGTTTCATGCTGCCCCGCACTGGGAAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: MTLVDKSMVPSG*RSFMLPRTGKG Trigger: TCCCTTCCCAGTGCGGGGCAGCATGAAACTTCGCAAGCCAGATGGCACCATGCTTTTGTCTACCAAAGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CAA 90 bp | TGCTTTTCCTTGTGCACATGGGCAGAAAGCACAGCAGTGTCACCTTaGTTCACCGTGTGTGTGACCTTGTCTGGAAACAGGTGTGCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: CFSLCTWAESTAVSP*FTVCVTLSGNRCAP Trigger: AGGGGCACACCTGTTTCCAGACAAGGTCACACACACGGTGAACAAAGGTGACACTGCTGTGCTTTCTGCCCATGTGCACAAGGAAAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CAA 90 bp | CTTCCCCTGGCCGGCTCAGCTGCACTCGGACATTGTATCCTGTCTTaGGCTTCAGGTTCATTAATGTCACATTCTCACTGGGATCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: LPLAGSAALGHCILS*ASGSLMSHSHWDPP Trigger: TGGTGGATCCCAGTGAGAATGTGACATTAATGAACCTGAAGCCAAAGACAGGATACAATGTCCGAGTGCAGCTGAGCCGGCCAGGGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CCA 72 bp | CACAATGACTTTGGTAGACAAAAGCATGGTGCCATCTaGCTTGCGAAGTTTCATGCTGCCCCGCACTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: HNDFGRQKHGAI*LAKFHAAPHWE Trigger: TTCCCAGTGCGGGGCAGCATGAAACTTCGCAAGCCAGATGGCACCATGCTTTTGTCTACCAAAGTCATTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CAA 72 bp | TTGTGCACATGGGCAGAAAGCACAGCAGTGTCACCTTaGTTCACCGTGTGTGTGACCTTGTCTGGAAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: LCTWAESTAVSP*FTVCVTLSGNR Trigger: CCTGTTTCCAGACAAGGTCACACACACGGTGAACAAAGGTGACACTGCTGTGCTTTCTGCCCATGTGCACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CAA 72 bp | CCGTTGTTCTTCCAGATCACGTCAGTCTGCTTTTCCTaGTGCACATGGGCAGAAAGCACAGCAGTGTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: PLFFQITSVCFS*CTWAESTAVSP Trigger: AGGTGACACTGCTGTGCTTTCTGCCCATGTGCACAAGGAAAAGCAGACTGACGTGATCTGGAAGAACAACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CAA 72 bp | AACTCTGCTGTGGTCCTGTCTGGCTCCACAATGACTTaGGTAGACAAAAGCATGGTGCCATCTGGCTTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: NSAVVLSGSTMT*VDKSMVPSGLR Trigger: TCGCAAGCCAGATGGCACCATGCTTTTGTCTACCAAAGTCATTGTGGAGCCAGACAGGACCACAGCAGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CAA 90 bp | GGCACTTCAAACTCTGCTGTGGTCCTGTCTGGCTCCACAATGACTTaGGTAGACAAAAGCATGGTGCCATCTGGCTTGCGAAGTTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: GTSNSAVVLSGSTMT*VDKSMVPSGLRSFM Trigger: CATGAAACTTCGCAAGCCAGATGGCACCATGCTTTTGTCTACCAAAGTCATTGTGGAGCCAGACAGGACCACAGCAGAGTTTGAAGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS TCA 72 bp | TTGGCCAGCAATGTTAAGTCAACAGACGCACCAACATaGGAGGCCAAGAAAAGAGTGGGGAGCAGCAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: LASNVKSTDAPT*EAKKRVGSSKE Trigger: CTCTTTGCTGCTCCCCACTCTTTTCTTGGCCTCTCATGTTGGTGCGTCTGTTGACTTAACATTGCTGGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CCA 72 bp | TTCCAGATCACGTCAGTCTGCTTTTCCTTGTGCACATaGGCAGAAAGCACAGCAGTGTCACCTTTGTTCACC | + |
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Preference number: 6 (lower is better) Translates to: FQITSVCFSLCT*AESTAVSPLFT Trigger: GGTGAACAAAGGTGACACTGCTGTGCTTTCTGCCCATGTGCACAAGGAAAAGCAGACTGACGTGATCTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS GCA 72 bp | TTGTTCTTCCAGATCACGTCAGTCTGCTTTTCCTTGTaGACATGGGCAGAAAGCACAGCAGTGTCACCTTTG | + |
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Preference number: 6 (lower is better) Translates to: LFFQITSVCFSL*TWAESTAVSPL Trigger: CAAAGGTGACACTGCTGTGCTTTCTGCCCATGTGCACAAGGAAAAGCAGACTGACGTGATCTGGAAGAACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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| CDS CCA 72 bp | TCTTTGGCTTCAGGTTCATTAATGTCACATTCTCACTaGGATCCACCACAATGGCAGACCAGGCAATCGTGC | + |
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Preference number: 6 (lower is better) Translates to: SLASGSLMSHSH*DPPQWQTRQSC Trigger: GCACGATTGCCTGGTCTGCCATTGTGGTGGATCCCAGTGAGAATGTGACATTAATGAACCTGAAGCCAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047421.6 ENSMUST00000184261.8 |
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