Pregenerated sensors for TICAM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056130Ensembl transcript IDs: ENSMUST00000070084.11
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGTAAGCCAGGCTGGCCTATGAACTCAGAGAGATCTTCCTGCCTCTaGCTCCCTAGTGCTGGGACTAACGGTGACCCTGACCCTGACCTC | + |
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Preference number: 1 (lower is better) Translates to: CKPGWPMNSERSSCL*LPSAGTNGDPDPDL Trigger: GAGGTCAGGGTCAGGGTCACCGTTAGTCCCAGCACTAGGGAGGCAGAGGCAGGAAGATCTCTCTGAGTTCATAGGCCAGCCTGGCTTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR GCA 90 bp | TCACTCTGTAAGCCAGGCTGGCCTATGAACTCAGAGAGATCTTCCTaGCTCTGCCTCCCTAGTGCTGGGACTAACGGTGACCCTGACCCT | + |
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Preference number: 1 (lower is better) Translates to: SLCKPGWPMNSERSS*LCLPSAGTNGDPDP Trigger: AGGGTCAGGGTCACCGTTAGTCCCAGCACTAGGGAGGCAGAGGCAGGAAGATCTCTCTGAGTTCATAGGCCAGCCTGGCTTACAGAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR TCA 90 bp | CTGGAACAGCCTTGGCACTCCCTGGGGGAAACACAACTGGGAAACTaGAAATGGCCAAGCAAAAAGCTGGGAAGGCTTGGGCTTATGGTT | + |
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Preference number: 1 (lower is better) Translates to: LEQPWHSLGETQLGN*KWPSKKLGRLGLMV Trigger: AACCATAAGCCCAAGCCTTCCCAGCTTTTTGCTTGGCCATTTTCAGTTTCCCAGTTGTGTTTCCCCCAGGGAGTGCCAAGGCTGTTCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR CCA 90 bp | TGGCTCAGACATACCTCTGATCCTGCTACAGCAGCTCCACATGGGTaGCACAGAGTACCCAGGGCATTTCACTGGTACTTGGCAGAATTT | + |
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Preference number: 1 (lower is better) Translates to: WLRHTSDPATAAPHG*HRVPRAFHWYLAEF Trigger: AAATTCTGCCAAGTACCAGTGAAATGCCCTGGGTACTCTGTGCCACCCATGTGGAGCTGCTGTAGCAGGATCAGAGGTATGTCTGAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR TCA 90 bp | ACTCTTTCTTTAGGTCATGGGGAATTGTTGGCTCAGACATACCTCTaGTCCTGCTACAGCAGCTCCACATGGGTGGCACAGAGTACCCAG | + |
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Preference number: 1 (lower is better) Translates to: TLSLGHGELLAQTYL*SCYSSSTWVAQSTQ Trigger: CTGGGTACTCTGTGCCACCCATGTGGAGCTGCTGTAGCAGGATCAGAGGTATGTCTGAGCCAACAATTCCCCATGACCTAAAGAAAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR GCA 90 bp | TCTGATTCCCAGCAGGCACTTTCCCCTAGCCACAAGCCCTGTCTGTaGTTGTTTAAACCGCTTCAGTCTCAAATGGGTCGAAGTTCTATG | + |
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Preference number: 1 (lower is better) Translates to: SDSQQALSPSHKPCL*LFKPLQSQMGRSSM Trigger: CATAGAACTTCGACCCATTTGAGACTGAAGCGGTTTAAACAAGCACAGACAGGGCTTGTGGCTAGGGGAAAGTGCCTGCTGGGAATCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR GCA 90 bp | CTGCACGTGCCCCATTCTGCATGTTTCTGTGTGACAGCACCAGGATaGTTTGTGGTAACTAAAATTCATGAAAGAAGCAGGAAGGGAAGT | + |
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Preference number: 1 (lower is better) Translates to: LHVPHSACFCVTAPG*FVVTKIHERSRKGS Trigger: ACTTCCCTTCCTGCTTCTTTCATGAATTTTAGTTACCACAAAGCATCCTGGTGCTGTCACACAGAAACATGCAGAATGGGGCACGTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR CCA 90 bp | CAGGTTGCCTGGGACATTACACCATGTTCTCTGACAAGCCCAGGATaGTATTTCTCAGAATACTTTTCCACAGTCTTCACTGGAGATGAG | + |
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Preference number: 1 (lower is better) Translates to: QVAWDITPCSLTSPG*YFSEYFSTVFTGDE Trigger: CTCATCTCCAGTGAAGACTGTGGAAAAGTATTCTGAGAAATACCATCCTGGGCTTGTCAGAGAACATGGTGTAATGTCCCAGGCAACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR GCA 90 bp | GAAAGTAGCCCAATCCTAGGGCTGCAGAAGTGTACCTTTCTTGTGTaGCACAGATTTCTTGGAAGCAGACTCACGTCTAAGCATTTCTTA | + |
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Preference number: 1 (lower is better) Translates to: ESSPILGLQKCTFLV*HRFLGSRLTSKHFL Trigger: TAAGAAATGCTTAGACGTGAGTCTGCTTCCAAGAAATCTGTGGCACACAAGAAAGGTACACTTCTGCAGCCCTAGGATTGGGCTACTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR TCA 90 bp | AAATTGCTGAACTCCAGGTTGCCTGGGACATTACACCATGTTCTCTaGCAAGCCCAGGATGGTATTTCTCAGAATACTTTTCCACAGTCT | + |
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Preference number: 1 (lower is better) Translates to: KLLNSRLPGTLHHVL*QAQDGISQNTFPQS Trigger: AGACTGTGGAAAAGTATTCTGAGAAATACCATCCTGGGCTTGTCAGAGAACATGGTGTAATGTCCCAGGCAACCTGGAGTTCAGCAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR GCA 90 bp | GGGCATTTCACTGGTACTTGGCAGAATTTCTCAGAATGGTCGGTGTaGATAATTAAAGCTACATATGTGCACATGAACCCAGATCCAAGA | + |
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Preference number: 1 (lower is better) Translates to: GHFTGTWQNFSEWSV*IIKATYVHMNPDPR Trigger: TCTTGGATCTGGGTTCATGTGCACATATGTAGCTTTAATTATGCACACCGACCATTCTGAGAAATTCTGCCAAGTACCAGTGAAATGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR GCA 90 bp | TGCAATGATTACAATTATGTTTCACCTCATAAAAGTTTCAGGCTTTaGTTATTGCTTTCTGGCTTCGGTTTTTCCCATCCTGGGAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: CNDYNYVSPHKSFRL*LLLSGFGFSHPGRE Trigger: CTCTCTCCCAGGATGGGAAAAACCGAAGCCAGAAAGCAATAAGCAAAGCCTGAAACTTTTATGAGGTGAAACATAATTGTAATCATTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR TCA 90 bp | TGCATAATTAAAGCTACATATGTGCACATGAACCCAGATCCAAGATaGCACCCATGCGCTGGCCTATTTTTGTCATTAGTTATTTTCATG | + |
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Preference number: 1 (lower is better) Translates to: CIIKATYVHMNPDPR*HPCAGLFLSLVIFM Trigger: CATGAAAATAACTAATGACAAAAATAGGCCAGCGCATGGGTGTCATCTTGGATCTGGGTTCATGTGCACATATGTAGCTTTAATTATGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR-3UTR TCA 90 bp | GATCTTCCTGCCTCTGCCTCCCTAGTGCTGGGACTAACGGTGACCCTGACCCTGCTGCATGTTTCTGTGTaGCAGCACCAGGATGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: DLPASASLVLGLTVTLTLLHVSV*QHQDAL Trigger: CAAAGCATCCTGGTGCTGTCACACAGAAACATGCAG...CAGGGTCAGGGTCACCGTTAGTCCCAGCACTAGGGAGGCAGAGGCAGGAAGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR-3UTR TCA 90 bp | CTCAGACATACCTCTGATCCTGCTACAGCAGCTCCACATGGGTGGCACAGAGTAACCCAACACCAGGTCTaGCTGTGGGGCACAGTAGCT | + |
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Preference number: 2 (lower is better) Translates to: LRHTSDPATAAPHGWHRVTQHQV*LWGTVA Trigger: AGCTACTGTGCCCCACAGTCAGACCTGGTGTTGGGT...TACTCTGTGCCACCCATGTGGAGCTGCTGTAGCAGGATCAGAGGTATGTCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR-3UTR GCA 90 bp | AGGGTGTGGCAGTGCCCATCTTTAATCTTAGCACTGTCAGGGTCAGAGGCAGGTAGATCTTCCTGCCTCTaGCTCCCTAGTGCTGGGACT | + |
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Preference number: 2 (lower is better) Translates to: RVWQCPSLILALSGSEAGRSSCL*LPSAGT Trigger: AGTCCCAGCACTAGGGAGGCAGAGGCAGGAAGATCT...ACCTGCCTCTGACCCTGACAGTGCTAAGATTAAAGATGGGCACTGCCACACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR-3UTR CCA 90 bp | CTCAGACATACCTCTGATCCTGCTACAGCAGCTCCACATGGGTGGCACAGAGTATGGTCAGACCTGTCCTaGCCAGAGCCATTTCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: LRHTSDPATAAPHGWHRVWSDLS*PEPFPS Trigger: TGAGGGAAATGGCTCTGGCCAGGACAGGTCTGACCA...TACTCTGTGCCACCCATGTGGAGCTGCTGTAGCAGGATCAGAGGTATGTCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR-3UTR CCA 90 bp | CTCAGACATACCTCTGATCCTGCTACAGCAGCTCCACATGGGTGGCACAGAGTACCGAGTAGCAGGGTGTaGCAGTGCCCATCTTTAATC | + |
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Preference number: 2 (lower is better) Translates to: LRHTSDPATAAPHGWHRVPSSRV*QCPSLI Trigger: GATTAAAGATGGGCACTGCCACACCCTGCTACTCGG...TACTCTGTGCCACCCATGTGGAGCTGCTGTAGCAGGATCAGAGGTATGTCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR-3UTR TCA 90 bp | TCTGACAAGCCCAGGATGGTATTTCTCAGAATACTTTTCCACAGTCTTCACTGGAGCTTGGCAGGCGTGTaGAGGGTGGGTGGTTCATGT | + |
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Preference number: 2 (lower is better) Translates to: SDKPRMVFLRILFHSLHWSLAGV*RVGGSC Trigger: ACATGAACCACCCACCCTTCACACGCCTGCCAAGCT...CCAGTGAAGACTGTGGAAAAGTATTCTGAGAAATACCATCCTGGGCTTGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR-3UTR GCA 90 bp | AGCTCCACATGGGTGGCACAGAGTACCCAGGGCATTTCACTGGTACTTGGCAGATGTACCTTTCTTGTGTaGCACAGATTTCTTGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: SSTWVAQSTQGISLVLGRCTFLV*HRFLGS Trigger: GCTTCCAAGAAATCTGTGGCACACAAGAAAGGTACA...TCTGCCAAGTACCAGTGAAATGCCCTGGGTACTCTGTGCCACCCATGTGGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR-3UTR CCA 90 bp | CTCAGACATACCTCTGATCCTGCTACAGCAGCTCCACATGGGTGGCACAGAGTACGTGTGAAGGGTGGGTaGTTCATGTTTTATGAGTAC | + |
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Preference number: 2 (lower is better) Translates to: LRHTSDPATAAPHGWHRVRVKGG*FMFYEY Trigger: GTACTCATAAAACATGAACCACCCACCCTTCACACG...TACTCTGTGCCACCCATGTGGAGCTGCTGTAGCAGGATCAGAGGTATGTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR-3UTR GCA 90 bp | CATGAACCCAGATCCAAGATGACACCCATGCGCTGGCCTATTTTTGTCATTAGTGCACGTGCCCCATTCTaGATGTTTCTGTGTGACAGC | + |
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Preference number: 2 (lower is better) Translates to: HEPRSKMTPMRWPIFVISARAPF*MFLCDS Trigger: GCTGTCACACAGAAACATGCAGAATGGGGCACGTGC...ACTAATGACAAAAATAGGCCAGCGCATGGGTGTCATCTTGGATCTGGGTTCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR-3UTR GCA 90 bp | AGCTCCACATGGGTGGCACAGAGTACCCAGGGCATTTCACTGGTACTTGGCAGATGGGGCACAGTAGCTTaGAACTATAAAGAAGTAAAC | + |
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Preference number: 2 (lower is better) Translates to: SSTWVAQSTQGISLVLGRWGTVA*NYKEVN Trigger: GTTTACTTCTTTATAGTTGCAAGCTACTGTGCCCCA...TCTGCCAAGTACCAGTGAAATGCCCTGGGTACTCTGTGCCACCCATGTGGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR-3UTR CCA 90 bp | CTCAGACATACCTCTGATCCTGCTACAGCAGCTCCACATGGGTGGCACAGAGTACTGACAAGCCCAGGATaGTATTTCTCAGAATACTTT | + |
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Preference number: 2 (lower is better) Translates to: LRHTSDPATAAPHGWHRVLTSPG*YFSEYF Trigger: AAAGTATTCTGAGAAATACCATCCTGGGCTTGTCAG...TACTCTGTGCCACCCATGTGGAGCTGCTGTAGCAGGATCAGAGGTATGTCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR-3UTR CCA 90 bp | TCTGACAAGCCCAGGATGGTATTTCTCAGAATACTTTTCCACAGTCTTCACTGGCGGTTTTTCCCATCCTaGGAGAGAGAGGACAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: SDKPRMVFLRILFHSLHWRFFPS*EREDKS Trigger: GCTTTTGTCCTCTCTCTCCCAGGATGGGAAAAACCG...CCAGTGAAGACTGTGGAAAAGTATTCTGAGAAATACCATCCTGGGCTTGTCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR-3UTR TCA 90 bp | TTTCAGGCTTTGCTTATTGCTTTCTGGCTTCGGTTTTTCCCATCCTGGGAGAGACCTGACCTCTACTTCTaGTCTCCAACTTACTATGTC | + |
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Preference number: 2 (lower is better) Translates to: FQALLIAFWLRFFPSWERPDLYF*SPTYYV Trigger: GACATAGTAAGTTGGAGATCAGAAGTAGAGGTCAGG...TCTCTCCCAGGATGGGAAAAACCGAAGCCAGAAAGCAATAAGCAAAGCCTGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR-3UTR TCA 90 bp | AATGAGACCCTGTACAAAGCCAAACCCAAAGAACCAAGTATAGGCATACATAGTAGCCAGGCTGGCCTATaGACTCAGAGAGATCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: NETLYKAKPKEPSIGIHSSQAGL*TQRDLP Trigger: AGGAAGATCTCTCTGAGTTCATAGGCCAGCCTGGCT...ACTATGTATGCCTATACTTGGTTCTTTGGGTTTGGCTTTGTACAGGGTCTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR-3UTR CCA 90 bp | GTTAAGCCCCCTCCCCTTCCGGATGCCTTGTTAACTCAGTTAAACTATACTCTTGTCATGGGGAATTGTTaGCTCAGACATACCTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: VKPPPLPDALLTQLNYTLVMGNC*LRHTSD Trigger: ATCAGAGGTATGTCTGAGCCAACAATTCCCCATGAC...AAGAGTATAGTTTAACTGAGTTAACAAGGCATCCGGAAGGGGAGGGGGCTTAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR CAA 90 bp | AAGTGGTCAGACCTGTCCTGGCCAGAGCCATTTCCCTCAAGTCTTTaGAGAATTTTCAATATCGTATTTTGCCACATGTGCCTGTTTATG | + |
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Preference number: 2 (lower is better) Translates to: KWSDLSWPEPFPSSL*RIFNIVFCHMCLFM Trigger: CATAAACAGGCACATGTGGCAAAATACGATATTGAAAATTCTCAAAAGACTTGAGGGAAATGGCTCTGGCCAGGACAGGTCTGACCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR-3UTR TCA 90 bp | CTTGTTAACTCAGTTAAACTATACTCTTTCTTTAGGTCATGGGGAATTGTTGGCTGCAAGTCGGTCTTCTaGTTCCCAGCAGGCACTTTC | + |
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Preference number: 2 (lower is better) Translates to: LVNSVKLYSFFRSWGIVGCKSVF*FPAGTF Trigger: GAAAGTGCCTGCTGGGAATCAGAAGACCGACTTGCA...GCCAACAATTCCCCATGACCTAAAGAAAGAGTATAGTTTAACTGAGTTAACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR-3UTR GCA 90 bp | GTTAAGCCCCCTCCCCTTCCGGATGCCTTGTTAACTCAGTTAAACTATACTCTTGTGACAGCACCAGGATaGTTTGTGGTAACTAAAATT | + |
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Preference number: 2 (lower is better) Translates to: VKPPPLPDALLTQLNYTLVTAPG*FVVTKI Trigger: AATTTTAGTTACCACAAAGCATCCTGGTGCTGTCAC...AAGAGTATAGTTTAACTGAGTTAACAAGGCATCCGGAAGGGGAGGGGGCTTAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR-3UTR CCA 90 bp | TCTGACAAGCCCAGGATGGTATTTCTCAGAATACTTTTCCACAGTCTTCACTGGTGTGAATTAAAGCCCTaGTCACAGAAGACACCTACA | + |
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Preference number: 2 (lower is better) Translates to: SDKPRMVFLRILFHSLHWCELKP*SQKTPT Trigger: TGTAGGTGTCTTCTGTGACCAGGGCTTTAATTCACA...CCAGTGAAGACTGTGGAAAAGTATTCTGAGAAATACCATCCTGGGCTTGTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR-3UTR TCA 90 bp | GATCACTCCCAAAGACTTAGTAGTCTAGATACTGTCACATCTGTGTGTCTGTCCATTGAGAAAATGCTATaGAAGCAGTCACCTTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: DHSQRLSSLDTVTSVCLSIEKML*KQSPSL Trigger: CAGAGAAGGTGACTGCTTTCATAGCATTTTCTCAAT...GGACAGACACACAGATGTGACAGTATCTAGACTACTAAGTCTTTGGGAGTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR-3UTR CCA 90 bp | GATCACTCCCAAAGACTTAGTAGTCTAGATACTGTCACATCTGTGTGTCTGTCCAAAACCACACATGGCTaGATTATTTCCAAAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: DHSQRLSSLDTVTSVCLSKTTHG*IISKSL Trigger: CAGGCTTTTGGAAATAATCCAGCCATGTGTGGTTTT...GGACAGACACACAGATGTGACAGTATCTAGACTACTAAGTCTTTGGGAGTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR-3UTR GCA 90 bp | GTTAAGCCCCCTCCCCTTCCGGATGCCTTGTTAACTCAGTTAAACTATACTCTTTTCAATATCGTATTTTaGCACATGTGCCTGTTTATG | + |
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Preference number: 2 (lower is better) Translates to: VKPPPLPDALLTQLNYTLFNIVF*HMCLFM Trigger: CATAAACAGGCACATGTGGCAAAATACGATATTGAA...AAGAGTATAGTTTAACTGAGTTAACAAGGCATCCGGAAGGGGAGGGGGCTTAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR-3UTR CCA 90 bp | CTTGTTAACTCAGTTAAACTATACTCTTTCTTTAGGTCATGGGGAATTGTTGGCCCCAGGGCATTTCACTaGTACTTGGCAGAATTTCTC | + |
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Preference number: 2 (lower is better) Translates to: LVNSVKLYSFFRSWGIVGPRAFH*YLAEFL Trigger: GAGAAATTCTGCCAAGTACCAGTGAAATGCCCTGGG...GCCAACAATTCCCCATGACCTAAAGAAAGAGTATAGTTTAACTGAGTTAACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR-3UTR TCA 90 bp | CTTGTTAACTCAGTTAAACTATACTCTTTCTTTAGGTCATGGGGAATTGTTGGCCTACATATGTGCACATaGACCCAGATCCAAGATGAC | + |
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Preference number: 2 (lower is better) Translates to: LVNSVKLYSFFRSWGIVGLHMCT*TQIQDD Trigger: GTCATCTTGGATCTGGGTTCATGTGCACATATGTAG...GCCAACAATTCCCCATGACCTAAAGAAAGAGTATAGTTTAACTGAGTTAACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR GCA 72 bp | GGCTGGCCTATGAACTCAGAGAGATCTTCCTGCCTCTaGCTCCCTAGTGCTGGGACTAACGGTGACCCTGAC | + |
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Preference number: 3 (lower is better) Translates to: GWPMNSERSSCL*LPSAGTNGDPD Trigger: GTCAGGGTCACCGTTAGTCCCAGCACTAGGGAGGCAGAGGCAGGAAGATCTCTCTGAGTTCATAGGCCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR CCA 72 bp | CATACCTCTGATCCTGCTACAGCAGCTCCACATGGGTaGCACAGAGTACCCAGGGCATTTCACTGGTACTTG | + |
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Preference number: 3 (lower is better) Translates to: HTSDPATAAPHG*HRVPRAFHWYL Trigger: CAAGTACCAGTGAAATGCCCTGGGTACTCTGTGCCACCCATGTGGAGCTGCTGTAGCAGGATCAGAGGTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR TCA 72 bp | TTAGGTCATGGGGAATTGTTGGCTCAGACATACCTCTaGTCCTGCTACAGCAGCTCCACATGGGTGGCACAG | + |
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Preference number: 3 (lower is better) Translates to: LGHGELLAQTYL*SCYSSSTWVAQ Trigger: CTGTGCCACCCATGTGGAGCTGCTGTAGCAGGATCAGAGGTATGTCTGAGCCAACAATTCCCCATGACCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR GCA 72 bp | CAGCAGGCACTTTCCCCTAGCCACAAGCCCTGTCTGTaGTTGTTTAAACCGCTTCAGTCTCAAATGGGTCGA | + |
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Preference number: 3 (lower is better) Translates to: QQALSPSHKPCL*LFKPLQSQMGR Trigger: TCGACCCATTTGAGACTGAAGCGGTTTAAACAAGCACAGACAGGGCTTGTGGCTAGGGGAAAGTGCCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR CCA 72 bp | CTTTTATTTCGCAGACAAAGGAGAATAGCTGCCCACTaGCACATTCATCCGCAGGGGCAGAGCTTGGACTGC | + |
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Preference number: 3 (lower is better) Translates to: LLFRRQRRIAAH*HIHPQGQSLDC Trigger: GCAGTCCAAGCTCTGCCCCTGCGGATGAATGTGCCAGTGGGCAGCTATTCTCCTTTGTCTGCGAAATAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR CCA 72 bp | TGTGTCTGTCCAACCTGGAACAGCCTTGGCACTCCCTaGGGGAAACACAACTGGGAAACTGAAAATGGCCAA | + |
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Preference number: 3 (lower is better) Translates to: CVCPTWNSLGTP*GKHNWETENGQ Trigger: TTGGCCATTTTCAGTTTCCCAGTTGTGTTTCCCCCAGGGAGTGCCAAGGCTGTTCCAGGTTGGACAGACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR-3UTR CAA 90 bp | AGCTCCACATGGGTGGCACAGAGTACCCAGGGCATTTCACTGGTACTTGGCAGATGGATCTCCATGAGTTaGAAGCCAATCTCGTCTACA | + |
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Preference number: 3 (lower is better) Translates to: SSTWVAQSTQGISLVLGRWISMS*KPISST Trigger: TGTAGACGAGATTGGCTTCAAACTCATGGAGATCCA...TCTGCCAAGTACCAGTGAAATGCCCTGGGTACTCTGTGCCACCCATGTGGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR GCA 72 bp | TCCAACCCTTTTATTTCGCAGACAAAGGAGAATAGCTaGCCACTGGCACATTCATCCGCAGGGGCAGAGCTT | + |
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Preference number: 3 (lower is better) Translates to: SNPFISQTKENS*PLAHSSAGAEL Trigger: AAGCTCTGCCCCTGCGGATGAATGTGCCAGTGGGCAGCTATTCTCCTTTGTCTGCGAAATAAAAGGGTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR TCA 72 bp | GGATTGAGAAAATGCTATGAAAGCAGTCACCTTCTCTaGGAACCCAACACCAGGTCTGACTGTGGGGCACAG | + |
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Preference number: 3 (lower is better) Translates to: GLRKCYESSHLL*EPNTRSDCGAQ Trigger: CTGTGCCCCACAGTCAGACCTGGTGTTGGGTTCTCAGAGAAGGTGACTGCTTTCATAGCATTTTCTCAATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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| 3UTR TCA 72 bp | GAATTAAAGCCCTGGTCACAGAAGACACCTACAAGATaGGGGCCCATCTCTACAGAGTCCCTCACTATCACA | + |
|
Preference number: 3 (lower is better) Translates to: ELKPWSQKTPTR*GPISTESLTIT Trigger: TGTGATAGTGAGGGACTCTGTAGAGATGGGCCCTCATCTTGTAGGTGTCTTCTGTGACCAGGGCTTTAATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| 3UTR TCA 72 bp | AAGCAGTCACCTTCTCTGAGAACCCAACACCAGGTCTaGCTGTGGGGCACAGTAGCTTGCAACTATAAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KQSPSLRTQHQV*LWGTVACNYKE Trigger: TTCTTTATAGTTGCAAGCTACTGTGCCCCACAGTCAGACCTGGTGTTGGGTTCTCAGAGAAGGTGACTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| 3UTR GCA 72 bp | CCAACTTACTATGTCAGTACTGCACGTGCCCCATTCTaGATGTTTCTGTGTGACAGCACCAGGATGCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: PTYYVSTARAPF*MFLCDSTRMLC Trigger: ACAAAGCATCCTGGTGCTGTCACACAGAAACATGCAGAATGGGGCACGTGCAGTACTGACATAGTAAGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| 3UTR CCA 72 bp | GGTGGCACAGAGTACCCAGGGCATTTCACTGGTACTTaGCAGAATTTCTCAGAATGGTCGGTGTGCATAATT | + |
|
Preference number: 3 (lower is better) Translates to: GGTEYPGHFTGT*QNFSEWSVCII Trigger: AATTATGCACACCGACCATTCTGAGAAATTCTGCCAAGTACCAGTGAAATGCCCTGGGTACTCTGTGCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| 3UTR GCA 72 bp | GTATCTTTTAAAAACCCGAGTAGCAGGGTGTGGCAGTaGCCATCTTTAATCTTAGCACTGTCAGGGTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VSFKNPSSRVWQ*PSLILALSGSE Trigger: CTCTGACCCTGACAGTGCTAAGATTAAAGATGGGCACTGCCACACCCTGCTACTCGGGTTTTTAAAAGATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| 3UTR CCA 72 bp | GTAGCTTGCAACTATAAAGAAGTAAACAGTGGCCCCTaGGGATTTAGAGAAGGGAGGATTAGGAGACAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: VACNYKEVNSGP*GFREGRIRRQA Trigger: TGCCTGTCTCCTAATCCTCCCTTCTCTAAATCCCCAGGGGCCACTGTTTACTTCTTTATAGTTGCAAGCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| 3UTR CCA 72 bp | ATCTTTAATCTTAGCACTGTCAGGGTCAGAGGCAGGTaGATCTCCATGAGTTTGAAGCCAATCTCGTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: IFNLSTVRVRGR*ISMSLKPISST Trigger: TGTAGACGAGATTGGCTTCAAACTCATGGAGATCCACCTGCCTCTGACCCTGACAGTGCTAAGATTAAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| 3UTR TCA 72 bp | AACTCCAGGTTGCCTGGGACATTACACCATGTTCTCTaGCAAGCCCAGGATGGTATTTCTCAGAATACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: NSRLPGTLHHVL*QAQDGISQNTF Trigger: AAAAGTATTCTGAGAAATACCATCCTGGGCTTGTCAGAGAACATGGTGTAATGTCCCAGGCAACCTGGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| 3UTR CCA 72 bp | AATGGCCAAGCAAAAAGCTGGGAAGGCTTGGGCTTATaGTTTGTTTGTTTGTTTGTTTGTTTGTGGGGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: NGQAKSWEGLGL*FVCLFVCLWGH Trigger: ATGCCCCCACAAACAAACAAACAAACAAACAAACCATAAGCCCAAGCCTTCCCAGCTTTTTGCTTGGCCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| 3UTR TCA 72 bp | AAAGCTACATATGTGCACATGAACCCAGATCCAAGATaGCACCCATGCGCTGGCCTATTTTTGTCATTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: KATYVHMNPDPR*HPCAGLFLSLV Trigger: AACTAATGACAAAAATAGGCCAGCGCATGGGTGTCATCTTGGATCTGGGTTCATGTGCACATATGTAGCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| 3UTR GCA 72 bp | ATGTTTCACCTCATAAAAGTTTCAGGCTTTGCTTATTaGTTTCTGGCTTCGGTTTTTCCCATCCTGGGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: MFHLIKVSGFAY*FLASVFPILGE Trigger: CTCTCCCAGGATGGGAAAAACCGAAGCCAGAAAGCAATAAGCAAAGCCTGAAACTTTTATGAGGTGAAACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| 3UTR CCA 72 bp | AAATATGTATCTTTTAAAAACCCGAGTAGCAGGGTGTaGCAGTGCCCATCTTTAATCTTAGCACTGTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: KYVSFKNPSSRV*QCPSLILALSG Trigger: CCCTGACAGTGCTAAGATTAAAGATGGGCACTGCCACACCCTGCTACTCGGGTTTTTAAAAGATACATATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| 3UTR CCA 72 bp | TGGGACATTACACCATGTTCTCTGACAAGCCCAGGATaGTATTTCTCAGAATACTTTTCCACAGTCTTCACT | + |
|
Preference number: 3 (lower is better) Translates to: WDITPCSLTSPG*YFSEYFSTVFT Trigger: AGTGAAGACTGTGGAAAAGTATTCTGAGAAATACCATCCTGGGCTTGTCAGAGAACATGGTGTAATGTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| 3UTR CCA 72 bp | GGGCATTTCACTGGTACTTGGCAGAATTTCTCAGAATaGTCGGTGTGCATAATTAAAGCTACATATGTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GHFTGTWQNFSE*SVCIIKATYVH Trigger: GTGCACATATGTAGCTTTAATTATGCACACCGACCATTCTGAGAAATTCTGCCAAGTACCAGTGAAATGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| 3UTR GCA 72 bp | ACTGGTACTTGGCAGAATTTCTCAGAATGGTCGGTGTaGATAATTAAAGCTACATATGTGCACATGAACCCA | + |
|
Preference number: 3 (lower is better) Translates to: TGTWQNFSEWSV*IIKATYVHMNP Trigger: TGGGTTCATGTGCACATATGTAGCTTTAATTATGCACACCGACCATTCTGAGAAATTCTGCCAAGTACCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| 3UTR-3UTR CAA 90 bp | CGAGAGGTTATTGATTTTAAAGGCAAACAGCTGGCGAGTCACATATTTTTCACAGAAGCTCTGACAGTCTaGAGTTTGTCATTCGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: REVIDFKGKQLASHIFFTEALTV*SLSFES Trigger: ACTTTCGAATGACAAACTCAAGACTGTCAGAGCTTC...TGTGAAAAATATGTGACTCGCCAGCTGTTTGCCTTTAAAATCAATAACCTCTCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| 3UTR CCA 72 bp | GTTCCAAATTCCAGCAGAAATAAAACCACACATGGCTaGATTATTTCCAAAAGCCTGACTGTTCTGACATTT | + |
|
Preference number: 3 (lower is better) Translates to: VPNSSRNKTTHG*IISKSLTVLTF Trigger: AAATGTCAGAACAGTCAGGCTTTTGGAAATAATCCAGCCATGTGTGGTTTTATTTCTGCTGGAATTTGGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| 3UTR CCA 72 bp | AAACTGAAAATGGCCAAGCAAAAAGCTGGGAAGGCTTaGGCTTATGGTTTGTTTGTTTGTTTGTTTGTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: KLKMAKQKAGKA*AYGLFVCLFVC Trigger: ACAAACAAACAAACAAACAAACAAACCATAAGCCCAAGCCTTCCCAGCTTTTTGCTTGGCCATTTTCAGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| CDS-3UTR TCA 90 bp | GATCTTCCTGCCTCTGCCTCCCTAGTGCTGGGACTAACGGTGACCCTGACCCTGCTTCCTCTAAGGCATTaGTGGTTTGCAGCGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DLPASASLVLGLTVTLTLLPLRH*WFAAPR Trigger: CCTTGGCGCTGCAAACCATCAATGCCTTAGAGGAAG...CAGGGTCAGGGTCACCGTTAGTCCCAGCACTAGGGAGGCAGAGGCAGGAAGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| CDS-3UTR GCA 90 bp | GATCTTCCTGCCTCTGCCTCCCTAGTGCTGGGACTAACGGTGACCCTGACCCTGGTGGCTCTGATCCACTaGTCTGCTCCACAAAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: DLPASASLVLGLTVTLTLVALIH*SAPQNH Trigger: GTGGTTTTGTGGAGCAGAGCAGTGGATCAGAGCCAC...CAGGGTCAGGGTCACCGTTAGTCCCAGCACTAGGGAGGCAGAGGCAGGAAGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| CDS-3UTR TCA 90 bp | AGCTCCACATGGGTGGCACAGAGTACCCAGGGCATTTCACTGGTACTTGGCAGAGGGGCCGCATGGGTATaGCGGAGTTGTACTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSTWVAQSTQGISLVLGRGAAWV*RSCTCA Trigger: AGCACAAGTACAACTCCGTCATACCCATGCGGCCCC...TCTGCCAAGTACCAGTGAAATGCCCTGGGTACTCTGTGCCACCCATGTGGAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| CDS-3UTR GCA 90 bp | TTTCAGGCTTTGCTTATTGCTTTCTGGCTTCGGTTTTTCCCATCCTGGGAGAGAAGGCCCCGCCCCCTTTaGCTCAGGTTGGTCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FQALLIAFWLRFFPSWERRPRPL*LRLVLL Trigger: GAGCAGGACCAACCTGAGGCAAAGGGGGCGGGGCCT...TCTCTCCCAGGATGGGAAAAACCGAAGCCAGAAAGCAATAAGCAAAGCCTGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| CDS-3UTR GCA 90 bp | AGCTCCACATGGGTGGCACAGAGTACCCAGGGCATTTCACTGGTACTTGGCAGAACGGAGTTGTACTTGTaGTGCCTGCTCACAGAATTC | + |
|
Preference number: 4 (lower is better) Translates to: SSTWVAQSTQGISLVLGRTELYL*CLLTEF Trigger: GAATTCTGTGAGCAGGCAGCACAAGTACAACTCCGT...TCTGCCAAGTACCAGTGAAATGCCCTGGGTACTCTGTGCCACCCATGTGGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| CDS-3UTR CCA 90 bp | AGGCTTTGCTTATTGCTTTCTGGCTTCGGTTTTTCCCATCCTGGGAGAGAGAGGCCCTTTGCCTCAGGTTaGTCCTGCTCTCCTGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLCLLLSGFGFSHPGRERPFASG*SCSPVG Trigger: ACCAACAGGAGAGCAGGACCAACCTGAGGCAAAGGG...CCTCTCTCTCCCAGGATGGGAAAAACCGAAGCCAGAAAGCAATAAGCAAAGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| CDS-3UTR GCA 90 bp | TTTCAGGCTTTGCTTATTGCTTTCTGGCTTCGGTTTTTCCCATCCTGGGAGAGAGCCTCAGGTTGGTCCTaGTCTCCTGTTGGTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FQALLIAFWLRFFPSWERASGWS*SPVGGS Trigger: AGAGCCACCAACAGGAGAGCAGGACCAACCTGAGGC...TCTCTCCCAGGATGGGAAAAACCGAAGCCAGAAAGCAATAAGCAAAGCCTGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| CDS-3UTR GCA 90 bp | GTACTGCACGTGCCCCATTCTGCATGTTTCTGTGTGACAGCACCAGGATGCTTTGCATCGTCTAGATTCTaGAAATGCAGTCTTCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VLHVPHSACFCVTAPGCFASSRF*KCSLPH Trigger: GTGCGGAAGACTGCATTTGCAGAATCTAGACGATGC...AAAGCATCCTGGTGCTGTCACACAGAAACATGCAGAATGGGGCACGTGCAGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| CDS-3UTR CCA 90 bp | CATGAACCCAGATCCAAGATGACACCCATGCGCTGGCCTATTTTTGTCATTAGTTTTTGCAGTAGATCCTaGACTCTGAGGGCCTCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: HEPRSKMTPMRWPIFVISFCSRS*TLRASS Trigger: CGACGAGGCCCTCAGAGTCCAGGATCTACTGCAAAA...ACTAATGACAAAAATAGGCCAGCGCATGGGTGTCATCTTGGATCTGGGTTCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| CDS-3UTR GCA 90 bp | TCTGACAAGCCCAGGATGGTATTTCTCAGAATACTTTTCCACAGTCTTCACTGGAAGGCATTGATGGTTTaGAGCGCCAAGGGAGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SDKPRMVFLRILFHSLHWKALMV*SAKGVR Trigger: ACGGACTCCCTTGGCGCTGCAAACCATCAATGCCTT...CCAGTGAAGACTGTGGAAAAGTATTCTGAGAAATACCATCCTGGGCTTGTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| CDS-3UTR GCA 90 bp | CTTGTTAACTCAGTTAAACTATACTCTTTCTTTAGGTCATGGGGAATTGTTGGCAACTCTTCTTCATCTTaGTCCTCAGGCCCCGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LVNSVKLYSFFRSWGIVGNSSSS*SSGPAP Trigger: GGGGGCGGGGCCTGAGGAGCAAGATGAAGAAGAGTT...GCCAACAATTCCCCATGACCTAAAGAAAGAGTATAGTTTAACTGAGTTAACAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| 3UTR CAA 72 bp | TGTGACCCTGTTAAGCCCCCTCCCCTTCCGGATGCCTaGTTAACTCAGTTAAACTATACTCTTTCTTTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CDPVKPPPLPDA*LTQLNYTLSLG Trigger: ACCTAAAGAAAGAGTATAGTTTAACTGAGTTAACAAGGCATCCGGAAGGGGAGGGGGCTTAACAGGGTCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| CDS-3UTR GCA 90 bp | GATCACTCCCAAAGACTTAGTAGTCTAGATACTGTCACATCTGTGTGTCTGTCCGAGTTGTACTTGTGCTaGCTGCTCACAGAATTCATC | + |
|
Preference number: 4 (lower is better) Translates to: DHSQRLSSLDTVTSVCLSELYLC*LLTEFI Trigger: GATGAATTCTGTGAGCAGGCAGCACAAGTACAACTC...GGACAGACACACAGATGTGACAGTATCTAGACTACTAAGTCTTTGGGAGTGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| 3UTR CAA 72 bp | TTAAGAAAAGTGTCAGAAGCTCTGACAGTCTTGAGTTaGTCATTCGAAAGTAGCCCAATCCTAGGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRKVSEALTVLS*SFESSPILGLQ Trigger: CTGCAGCCCTAGGATTGGGCTACTTTCGAATGACAAACTCAAGACTGTCAGAGCTTCTGACACTTTTCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| CDS-3UTR TCA 90 bp | AGGACAAAAGCCTTTAGAGACCCATCAATCCAACCCTTTTATTTCGCAGACAAATGTGTGGAAAAGCCTTaGCTTTCTTCCTCTAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTKAFRDPSIQPFYFADKCVEKP*LSSSKA Trigger: TGCCTTAGAGGAAGAAAGTCAAGGCTTTTCCACACA...TTTGTCTGCGAAATAAAAGGGTTGGATTGATGGGTCTCTAAAGGCTTTTGTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| CDS-3UTR GCA 90 bp | AGGACAAAAGCCTTTAGAGACCCATCAATCCAACCCTTTTATTTCGCAGACAAAATACCAAAGTCGTTTTaGAGTAGATCCTGGACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTKAFRDPSIQPFYFADKIPKSF*SRSWTL Trigger: CAGAGTCCAGGATCTACTGCAAAACGACTTTGGTAT...TTTGTCTGCGAAATAAAAGGGTTGGATTGATGGGTCTCTAAAGGCTTTTGTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| CDS-3UTR CCA 90 bp | GAATTTTCAATATCGTATTTTGCCACATGTGCCTGTTTATGGCTCAACACAAGACTTCCTCAGAATTCTTaGAGTCTGACTCATGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: EFSISYFATCACLWLNTRLPQNS*SLTHGR Trigger: ACGGCCATGAGTCAGACTCCAAGAATTCTGAGGAAG...TCTTGTGTTGAGCCATAAACAGGCACATGTGGCAAAATACGATATTGAAAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| CDS-3UTR CCA 90 bp | AGGACAAAAGCCTTTAGAGACCCATCAATCCAACCCTTTTATTTCGCAGACAAATTCTCTCCACTTGTGTaGAAAAGCCTTGACTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RTKAFRDPSIQPFYFADKFSPLV*KSLDFL Trigger: AAGAAAGTCAAGGCTTTTCCACACAAGTGGAGAGAA...TTTGTCTGCGAAATAAAAGGGTTGGATTGATGGGTCTCTAAAGGCTTTTGTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| CDS-3UTR GCA 90 bp | AGGACAAAAGCCTTTAGAGACCCATCAATCCAACCCTTTTATTTCGCAGACAAATTCCATATACTTTGTTaGCTCTCAAATACAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTKAFRDPSIQPFYFADKFHILC*LSNTDS Trigger: GGAGTCTGTATTTGAGAGGCAACAAAGTATATGGAA...TTTGTCTGCGAAATAAAAGGGTTGGATTGATGGGTCTCTAAAGGCTTTTGTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| 3UTR CAA 72 bp | TCCCTCAAGTCTTTTGAGAATTTTCAATATCGTATTTaGCCACATGTGCCTGTTTATGGCTCAACACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLKSFENFQYRI*PHVPVYGSTQE Trigger: TTCTTGTGTTGAGCCATAAACAGGCACATGTGGCAAAATACGATATTGAAAATTCTCAAAAGACTTGAGGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| CDS-3UTR CAA 90 bp | GATCTTCCTGCCTCTGCCTCCCTAGTGCTGGGACTAACGGTGACCCTGACCCTGCCCCTTTGCCTCAGGTaGGTCCTGCTCTCCTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: DLPASASLVLGLTVTLTLPLCLR*VLLSCW Trigger: CCAACAGGAGAGCAGGACCAACCTGAGGCAAAGGGG...CAGGGTCAGGGTCACCGTTAGTCCCAGCACTAGGGAGGCAGAGGCAGGAAGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| CDS-3UTR CAA 90 bp | AGCTCCACATGGGTGGCACAGAGTACCCAGGGCATTTCACTGGTACTTGGCAGACAGGCCCCGCCCCCTTaGCCTCAGGTTGGTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSTWVAQSTQGISLVLGRQAPPP*PQVGPA Trigger: AGCAGGACCAACCTGAGGCAAAGGGGGCGGGGCCTG...TCTGCCAAGTACCAGTGAAATGCCCTGGGTACTCTGTGCCACCCATGTGGAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| CDS-3UTR CAA 90 bp | GAATTTTCAATATCGTATTTTGCCACATGTGCCTGTTTATGGCTCAACACAAGAGGTCCTGCTCTCCTGTaGGTGGCTCTGATCCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: EFSISYFATCACLWLNTRGPALL*VALIHC Trigger: GCAGTGGATCAGAGCCACCAACAGGAGAGCAGGACC...TCTTGTGTTGAGCCATAAACAGGCACATGTGGCAAAATACGATATTGAAAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| CDS-3UTR CAA 90 bp | CGAGAGGTTATTGATTTTAAAGGCAAACAGCTGGCGAGTCACATATTTTTCACAGCTTCCTCAGAATTCTaGGAGTCTGACTCATGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: REVIDFKGKQLASHIFFTASSEF*ESDSWP Trigger: CGGCCATGAGTCAGACTCCAAGAATTCTGAGGAAGC...TGTGAAAAATATGTGACTCGCCAGCTGTTTGCCTTTAAAATCAATAACCTCTCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| CDS-3UTR CAA 90 bp | CGAGAGGTTATTGATTTTAAAGGCAAACAGCTGGCGAGTCACATATTTTTCACATCTTCCTCTAAGGCATaGATGGTTTGCAGCGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: REVIDFKGKQLASHIFFTSSSKA*MVCSAK Trigger: CTTGGCGCTGCAAACCATCAATGCCTTAGAGGAAGA...TGTGAAAAATATGTGACTCGCCAGCTGTTTGCCTTTAAAATCAATAACCTCTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
||
| CDS-3UTR CAA 90 bp | CATGAACCCAGATCCAAGATGACACCCATGCGCTGGCCTATTTTTGTCATTAGTCTCTTTCCATATACTTaGTTGCCTCTCAAATACAGA | + |
|
Preference number: 5 (lower is better) Translates to: HEPRSKMTPMRWPIFVISLFPYT*LPLKYR Trigger: TCTGTATTTGAGAGGCAACAAAGTATATGGAAAGAG...ACTAATGACAAAAATAGGCCAGCGCATGGGTGTCATCTTGGATCTGGGTTCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070084.11 |
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