Pregenerated sensors for TICAM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047123Ensembl transcript IDs: ENSMUST00000058136.9
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTCCCTATGTGCCCCGGGACCGCATCCTCCCCAGAGAGACCCTATaGACAGCATGTGTCACAGTGAATGAAGTTTACGAGGCTGCGCTG | + |
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Preference number: 1 (lower is better) Translates to: PPYVPRDRILPRETL*TACVTVNEVYEAAL Trigger: CAGCGCAGCCTCGTAAACTTCATTCACTGTGACACATGCTGTTCATAGGGTCTCTCTGGGGAGGATGCGGTCCCGGGGCACATAGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| 3UTR TCA 90 bp | CATCCTCCCCAGAGAGACCCTATGAACAGCATGTGTCACAGTGAATaGAGTTTACGAGGCTGCGCTGAGGGCACCTCAGAGGTGCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: HPPQRDPMNSMCHSE*SLRGCAEGTSEVPL Trigger: CAGAGGCACCTCTGAGGTGCCCTCAGCGCAGCCTCGTAAACTTCATTCACTGTGACACATGCTGTTCATAGGGTCTCTCTGGGGAGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| 3UTR TCA 90 bp | GTCCCACAGTCTGTTCAAATGGGGTTTCTGCATGTTTCCCAGGCCTaGTTTATAGGTGTGGTCTTCCCTGCCTCTGGGGTCTCAAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: VPQSVQMGFLHVSQA*FIGVVFPASGVSSW Trigger: CCAGCTTGAGACCCCAGAGGCAGGGAAGACCACACCTATAAATCAGGCCTGGGAAACATGCAGAAACCCCATTTGAACAGACTGTGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| 3UTR CCA 90 bp | GTGCCTCTGGCCCCATCATCCTCTGTCCACATAGAGGATTCAGATTaGAGTCCCACAGTCTGTTCAAATGGGGTTTCTGCATGTTTCCCA | + |
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Preference number: 1 (lower is better) Translates to: VPLAPSSSVHIEDSD*SPTVCSNGVSACFP Trigger: TGGGAAACATGCAGAAACCCCATTTGAACAGACTGTGGGACTCCAATCTGAATCCTCTATGTGGACAGAGGATGATGGGGCCAGAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| 3UTR-3UTR GCA 90 bp | ACAGGACCCTCCCTATGTGCCCCGGGACCGCATCCTCCCCAGAGAGACCCTATGAGGGCACCTCAGAGGTaGCTCTGGCCCCATCATCCT | + |
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Preference number: 2 (lower is better) Translates to: TGPSLCAPGPHPPQRDPMRAPQR*LWPHHP Trigger: AGGATGATGGGGCCAGAGGCACCTCTGAGGTGCCCT...CATAGGGTCTCTCTGGGGAGGATGCGGTCCCGGGGCACATAGGGAGGGTCCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| 3UTR CAA 90 bp | GGTGCCTCTGGCCCCATCATCCTCTGTCCACATAGAGGATTCAGATaGGAGTCCCACAGTCTGTTCAAATGGGGTTTCTGCATGTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: GASGPIILCPHRGFR*ESHSLFKWGFCMFP Trigger: GGGAAACATGCAGAAACCCCATTTGAACAGACTGTGGGACTCCAATCTGAATCCTCTATGTGGACAGAGGATGATGGGGCCAGAGGCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| 3UTR-3UTR CCA 90 bp | GTCAATAACTTTATTATAAAAACAGGACCCTCCCTATGTGCCCCGGGACCGCATCACAGTCTGTTCAAATaGGGTTTCTGCATGTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: VNNFIIKTGPSLCAPGPHHSLFK*GFCMFP Trigger: GGGAAACATGCAGAAACCCCATTTGAACAGACTGTG...ATGCGGTCCCGGGGCACATAGGGAGGGTCCTGTTTTTATAATAAAGTTATTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| 3UTR-3UTR GCA 90 bp | TATGACTCAGTTGTCAATAACTTTATTATAAAAACAGGACCCTCCCTATGTGCCTTCAAATGGGGTTTCTaGATGTTTCCCAGGCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: YDSVVNNFIIKTGPSLCAFKWGF*MFPRPD Trigger: ATCAGGCCTGGGAAACATGCAGAAACCCCATTTGAA...GGCACATAGGGAGGGTCCTGTTTTTATAATAAAGTTATTGACAACTGAGTCATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| 3UTR CCA 72 bp | ATAGGTGTGGTCTTCCCTGCCTCTGGGGTCTCAAGCTaGGTCCAACTAATAGCCACTGTGGGAGCCCAAGCT | + |
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Preference number: 3 (lower is better) Translates to: IGVVFPASGVSS*VQLIATVGAQA Trigger: AGCTTGGGCTCCCACAGTGGCTATTAGTTGGACCCAGCTTGAGACCCCAGAGGCAGGGAAGACCACACCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| 3UTR TCA 72 bp | GTGCCCCGGGACCGCATCCTCCCCAGAGAGACCCTATaGACAGCATGTGTCACAGTGAATGAAGTTTACGAG | + |
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Preference number: 3 (lower is better) Translates to: VPRDRILPRETL*TACVTVNEVYE Trigger: CTCGTAAACTTCATTCACTGTGACACATGCTGTTCATAGGGTCTCTCTGGGGAGGATGCGGTCCCGGGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| 3UTR TCA 72 bp | CAGAGAGACCCTATGAACAGCATGTGTCACAGTGAATaGAGTTTACGAGGCTGCGCTGAGGGCACCTCAGAG | + |
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Preference number: 3 (lower is better) Translates to: QRDPMNSMCHSE*SLRGCAEGTSE Trigger: CTCTGAGGTGCCCTCAGCGCAGCCTCGTAAACTTCATTCACTGTGACACATGCTGTTCATAGGGTCTCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| 3UTR TCA 72 bp | TCTGTTCAAATGGGGTTTCTGCATGTTTCCCAGGCCTaGTTTATAGGTGTGGTCTTCCCTGCCTCTGGGGTC | + |
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Preference number: 3 (lower is better) Translates to: SVQMGFLHVSQA*FIGVVFPASGV Trigger: GACCCCAGAGGCAGGGAAGACCACACCTATAAATCAGGCCTGGGAAACATGCAGAAACCCCATTTGAACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| 3UTR CCA 72 bp | GCCCCATCATCCTCTGTCCACATAGAGGATTCAGATTaGAGTCCCACAGTCTGTTCAAATGGGGTTTCTGCA | + |
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Preference number: 3 (lower is better) Translates to: APSSSVHIEDSD*SPTVCSNGVSA Trigger: TGCAGAAACCCCATTTGAACAGACTGTGGGACTCCAATCTGAATCCTCTATGTGGACAGAGGATGATGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| 3UTR GCA 72 bp | CAATGGGATGAGTATATTTACATAATTTCCGTTTCCTaGCTCTCAAGGACTGGGTCAGCCGACCTCCTTTTC | + |
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Preference number: 3 (lower is better) Translates to: QWDEYIYIISVS*LSRTGSADLLF Trigger: GAAAAGGAGGTCGGCTGACCCAGTCCTTGAGAGGCAGGAAACGGAAATTATGTAAATATACTCATCCCATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| 3UTR CCA 72 bp | TATTTACATAATTTCCGTTTCCTGCCTCTCAAGGACTaGGTCAGCCGACCTCCTTTTCTATTCCAGTCATGG | + |
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Preference number: 3 (lower is better) Translates to: YLHNFRFLPLKD*VSRPPFLFQSW Trigger: CCATGACTGGAATAGAAAAGGAGGTCGGCTGACCCAGTCCTTGAGAGGCAGGAAACGGAAATTATGTAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | ACAGGACCCTCCCTATGTGCCCCGGGACCGCATCCTCCCCAGAGAGACCCTATGGTGGACACTTGTGTCTaGAGCAGCCAGGGCGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: TGPSLCAPGPHPPQRDPMVDTCV*SSQGVR Trigger: CCTGACGCCCTGGCTGCTCCAGACACAAGTGTCCAC...CATAGGGTCTCTCTGGGGAGGATGCGGTCCCGGGGCACATAGGGAGGGTCCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | AGGACCCTCCCTATGTGCCCCGGGACCGCATCCTCCCCAGAGAGACCCTATGAACCTCAGGGCCCTCTGTaGTCTCCATGTCTGCCCACT | + |
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Preference number: 4 (lower is better) Translates to: RTLPMCPGTASSPERPYEPQGPL*SPCLPT Trigger: AGTGGGCAGACATGGAGACCACAGAGGGCCCTGAGG...TTCATAGGGTCTCTCTGGGGAGGATGCGGTCCCGGGGCACATAGGGAGGGTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR TCA 90 bp | GCTGAGGGCACCTCAGAGGTGCCTCTGGCCCCATCATCCTCTGTCCACATAGAGGGCTGGGGAGGAGGCTaGTGGAAAGGATTGGGACTG | + |
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Preference number: 4 (lower is better) Translates to: AEGTSEVPLAPSSSVHIEGWGGG*WKGLGL Trigger: CAGTCCCAATCCTTTCCATCAGCCTCCTCCCCAGCC...CTCTATGTGGACAGAGGATGATGGGGCCAGAGGCACCTCTGAGGTGCCCTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR GCA 90 bp | CTAAGTCCTCTGGCTACTCTGGGGACCCAGGCGAGGTTCCCTTCCTCCACTATCGAGGAGCAGGGTAGCTaGTCGGGGAGGAAGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: LSPLATLGTQARFPSSTIEEQGS*SGRKQR Trigger: CCTCTGCTTCCTCCCCGAGCAGCTACCCTGCTCCTC...GATAGTGGAGGAAGGGAACCTCGCCTGGGTCCCCAGAGTAGCCAGAGGACTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR TCA 90 bp | GTGGTCTTCCCTGCCTCTGGGGTCTCAAGCTGGGTCCAACTAATAGCCACTGTGCCACGCCCGGGCACCTaGAATTCCTCACAGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: VVFPASGVSSWVQLIATVPRPGT*NSSQKV Trigger: CACCTTCTGTGAGGAATTTCAGGTGCCCGGGCGTGG...CACAGTGGCTATTAGTTGGACCCAGCTTGAGACCCCAGAGGCAGGGAAGACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR GCA 90 bp | ATAGGTGTGGTCTTCCCTGCCTCTGGGGTCTCAAGCTGGGTCCAACTAATAGCCGCATCTTGGAGACAGTaGAGCTCACCACGCCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: IGVVFPASGVSSWVQLIAASWRQ*SSPRPG Trigger: GCCCGGGCGTGGTGAGCTGCACTGTCTCCAAGATGC...GGCTATTAGTTGGACCCAGCTTGAGACCCCAGAGGCAGGGAAGACCACACCTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | GCTACTCTGGGGACCCAGGCGAGGTTCCCTTCCTCCACTATCATTTTAAGGACCAGTTGGCCCAGCTGGTaGTCACCCTGGGAGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: ATLGTQARFPSSTIILRTSWPSW*SPWEAK Trigger: CTTTGCCTCCCAGGGTGACCACCAGCTGGGCCAACT...GGTCCTTAAAATGATAGTGGAGGAAGGGAACCTCGCCTGGGTCCCCAGAGTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | ACCTCAGAGGTGCCTCTGGCCCCATCATCCTCTGTCCACATAGAGGATTCAGATTGGAGTTGGCCCAGCTaGTGGTCACCCTGGGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: TSEVPLAPSSSVHIEDSDWSWPS*WSPWEA Trigger: TGCCTCCCAGGGTGACCACCAGCTGGGCCAACTCCA...ATCTGAATCCTCTATGTGGACAGAGGATGATGGGGCCAGAGGCACCTCTGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | GCTACTCTGGGGACCCAGGCGAGGTTCCCTTCCTCCACTATCATTTTAAGGACCGCCTCATTCTGGAGTTaGCCCAGCTGGTGGTCACCC | + |
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Preference number: 4 (lower is better) Translates to: ATLGTQARFPSSTIILRTASFWS*PSWWSP Trigger: GGGTGACCACCAGCTGGGCCAACTCCAGAATGAGGC...GGTCCTTAAAATGATAGTGGAGGAAGGGAACCTCGCCTGGGTCCCCAGAGTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | ATAGGTGTGGTCTTCCCTGCCTCTGGGGTCTCAAGCTGGGTCCAACTAATAGCCAGCTTAGGGGAGGCTTaGAGGGATGGTGGCTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: IGVVFPASGVSSWVQLIASLGEA*RDGGWA Trigger: TGCCCAGCCACCATCCCTCCAAGCCTCCCCTAAGCT...GGCTATTAGTTGGACCCAGCTTGAGACCCCAGAGGCAGGGAAGACCACACCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | CTAAGTCCTCTGGCTACTCTGGGGACCCAGGCGAGGTTCCCTTCCTCCACTATCCAGTCTGGTTGTATCTaGGCTGAGCTGGGCCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: LSPLATLGTQARFPSSTIQSGCI*AELGLR Trigger: TCTCAGGCCCAGCTCAGCCCAGATACAACCAGACTG...GATAGTGGAGGAAGGGAACCTCGCCTGGGTCCCCAGAGTAGCCAGAGGACTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | GTGGTCTTCCCTGCCTCTGGGGTCTCAAGCTGGGTCCAACTAATAGCCACTGTGAGGCTGAGGGAAGGATaGAGGCTGTGGGGAATAGGG | + |
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Preference number: 4 (lower is better) Translates to: VVFPASGVSSWVQLIATVRLREG*RLWGIG Trigger: CCCTATTCCCCACAGCCTCCATCCTTCCCTCAGCCT...CACAGTGGCTATTAGTTGGACCCAGCTTGAGACCCCAGAGGCAGGGAAGACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | AGGACCCTCCCTATGTGCCCCGGGACCGCATCCTCCCCAGAGAGACCCTATGAAGCTGATGGAAAGGATTaGGACTGTGGGGAAGAGACT | + |
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Preference number: 4 (lower is better) Translates to: RTLPMCPGTASSPERPYEADGKD*DCGEET Trigger: AGTCTCTTCCCCACAGTCCCAATCCTTTCCATCAGC...TTCATAGGGTCTCTCTGGGGAGGATGCGGTCCCGGGGCACATAGGGAGGGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR TCA 90 bp | ACCTCAGAGGTGCCTCTGGCCCCATCATCCTCTGTCCACATAGAGGATTCAGATGGCAGGAGGGCTGGATaGCGTGGTGTTCTGCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: TSEVPLAPSSSVHIEDSDGRRAG*RGVLQR Trigger: TCTCTGCAGAACACCACGTCATCCAGCCCTCCTGCC...ATCTGAATCCTCTATGTGGACAGAGGATGATGGGGCCAGAGGCACCTCTGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | ATAGGTGTGGTCTTCCCTGCCTCTGGGGTCTCAAGCTGGGTCCAACTAATAGCCAGGCTGAGGGAAGCATaGAGGCTGAGGGAAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: IGVVFPASGVSSWVQLIARLREA*RLREGW Trigger: CCATCCTTCCCTCAGCCTCCATGCTTCCCTCAGCCT...GGCTATTAGTTGGACCCAGCTTGAGACCCCAGAGGCAGGGAAGACCACACCTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR GCA 90 bp | AAGTCCTCTGGCTACTCTGGGGACCCAGGCGAGGTTCCCTTCCTCCACTATCATCATCCAGCCACACAATaGTGTGGAGCAGTCTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: KSSGYSGDPGEVPFLHYHHPATQ*CGAVWL Trigger: CAACCAGACTGCTCCACAGCATTGTGTGGCTGGATG...ATGATAGTGGAGGAAGGGAACCTCGCCTGGGTCCCCAGAGTAGCCAGAGGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | AAGTCCTCTGGCTACTCTGGGGACCCAGGCGAGGTTCCCTTCCTCCACTATCATGGCCCATGGGTTCCATaGTGTGAAGAGAGAAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: KSSGYSGDPGEVPFLHYHGPWVP*CEERKA Trigger: TGCCTTTCTCTCTTCACACCATGGAACCCATGGGCC...ATGATAGTGGAGGAAGGGAACCTCGCCTGGGTCCCCAGAGTAGCCAGAGGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | CCTCTGGCTACTCTGGGGACCCAGGCGAGGTTCCCTTCCTCCACTATCATTTTACCAAAACAGGGGATGTaGAGGTTGGAGGAGCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: PLATLGTQARFPSSTIILPKQGM*RLEEQG Trigger: ACCCTGCTCCTCCAACCTCCACATCCCCTGTTTTGG...TAAAATGATAGTGGAGGAAGGGAACCTCGCCTGGGTCCCCAGAGTAGCCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR TCA 90 bp | GAGTCCCACAGTCTGTTCAAATGGGGTTTCTGCATGTTTCCCAGGCCTGATTTAGGGCTGAGCTGGGCCTaGGAACACTCAAGTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: ESHSLFKWGFCMFPRPDLGLSWA*EHSSGR Trigger: CCTCCCACTTGAGTGTTCTCAGGCCCAGCTCAGCCC...TAAATCAGGCCTGGGAAACATGCAGAAACCCCATTTGAACAGACTGTGGGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR TCA 90 bp | ACCCAGGCGAGGTTCCCTTCCTCCACTATCATTTTAAGGACCCAGGTGAAGTCCTGGTTGTATCTGGGCTaGGCTGGGCCTGAGAACACT | + |
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Preference number: 4 (lower is better) Translates to: TQARFPSSTIILRTQVKSWLYLG*AGPENT Trigger: AGTGTTCTCAGGCCCAGCTCAGCCCAGATACAACCA...GGACTTCACCTGGGTCCTTAAAATGATAGTGGAGGAAGGGAACCTCGCCTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | GAGTCCCACAGTCTGTTCAAATGGGGTTTCTGCATGTTTCCCAGGCCTGATTTATCCTCAGCCAGCAGGTaGTACAGGCGAGCCACCGTC | + |
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Preference number: 4 (lower is better) Translates to: ESHSLFKWGFCMFPRPDLSSASR*YRRATV Trigger: GACGGTGGCTCGCCTGTACCACCTGCTGGCTGAGGA...TAAATCAGGCCTGGGAAACATGCAGAAACCCCATTTGAACAGACTGTGGGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | GAGTCCCACAGTCTGTTCAAATGGGGTTTCTGCATGTTTCCCAGGCCTGATTTAGAGAGGCTGAGGTCCTaGAGTCTGTGGGGCTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: ESHSLFKWGFCMFPRPDLERLRS*SLWGWG Trigger: TCCCCAGCCCCACAGACTCCAGGACCTCAGCCTCTC...TAAATCAGGCCTGGGAAACATGCAGAAACCCCATTTGAACAGACTGTGGGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR TCA 90 bp | GAGGATTCAGATTGGAGTCCCACAGTCTGTTCAAATGGGGTTTCTGCATGTTTCCACTGCAGGGGATGCTaGAGGTGGCTGCAGGGAACC | + |
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Preference number: 4 (lower is better) Translates to: EDSDWSPTVCSNGVSACFHCRGC*RWLQGT Trigger: GGTTCCCTGCAGCCACCTTCAGCATCCCCTGCAGTG...GAAACATGCAGAAACCCCATTTGAACAGACTGTGGGACTCCAATCTGAATCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR TCA 90 bp | AAGTCCTCTGGCTACTCTGGGGACCCAGGCGAGGTTCCCTTCCTCCACTATCATCTGATCAGATGTTTCTaGGTGGTCCAAAACAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: KSSGYSGDPGEVPFLHYHLIRCF*VVQNRG Trigger: TCCCCTGTTTTGGACCACTCAGAAACATCTGATCAG...ATGATAGTGGAGGAAGGGAACCTCGCCTGGGTCCCCAGAGTAGCCAGAGGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR GCA 90 bp | CTAAGTCCTCTGGCTACTCTGGGGACCCAGGCGAGGTTCCCTTCCTCCACTATCTGTCTTGAAGGTGTTTaGCACCTTTCTGGCGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: LSPLATLGTQARFPSSTICLEGV*HLSGED Trigger: ATCTTCGCCAGAAAGGTGGCAAACACCTTCAAGACA...GATAGTGGAGGAAGGGAACCTCGCCTGGGTCCCCAGAGTAGCCAGAGGACTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR TCA 90 bp | ACCCAGGCGAGGTTCCCTTCCTCCACTATCATTTTAAGGACCCAGGTGAAGTCCGGAGCTTCTGTGTCTTaGAGGTGTTTGCCACCTTTC | + |
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Preference number: 4 (lower is better) Translates to: TQARFPSSTIILRTQVKSGASVS*RCLPPF Trigger: GAAAGGTGGCAAACACCTTCAAGACACAGAAGCTCC...GGACTTCACCTGGGTCCTTAAAATGATAGTGGAGGAAGGGAACCTCGCCTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR GCA 90 bp | GAGTCCCACAGTCTGTTCAAATGGGGTTTCTGCATGTTTCCCAGGCCTGATTTAAGGGTTCTGGCCTCCTaGGCTTTCTTCCAGCGTACC | + |
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Preference number: 4 (lower is better) Translates to: ESHSLFKWGFCMFPRPDLRVLAS*AFFQRT Trigger: GGTACGCTGGAAGAAAGCGCAGGAGGCCAGAACCCT...TAAATCAGGCCTGGGAAACATGCAGAAACCCCATTTGAACAGACTGTGGGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR GCA 90 bp | ATTTATAGGTGTGGTCTTCCCTGCCTCTGGGGTCTCAAGCTGGGTCCAACTAATCACGTTTTGCCGCTCTaGCTCCAGCTGTATGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: IYRCGLPCLWGLKLGPTNHVLPL*LQLYAL Trigger: CAGAGCATACAGCTGGAGGCAGAGCGGCAAAACGTG...ATTAGTTGGACCCAGCTTGAGACCCCAGAGGCAGGGAAGACCACACCTATAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | GAGGATTCAGATTGGAGTCCCACAGTCTGTTCAAATGGGGTTTCTGCATGTTTCGACGAGGCTGGCTTCTaGTCACTGCAGGGGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: EDSDWSPTVCSNGVSACFDEAGF*SLQGML Trigger: CAGCATCCCCTGCAGTGACCAGAAGCCAGCCTCGTC...GAAACATGCAGAAACCCCATTTGAACAGACTGTGGGACTCCAATCTGAATCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | GCGAGGTTCCCTTCCTCCACTATCATTTTAAGGACCCAGGTGAAGTCCAATCTTTGGCTGATCTCTAGGTaGCTGGCCAGTGAGGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: ARFPSSTIILRTQVKSNLWLISR*LASEAV Trigger: CACTGCCTCACTGGCCAGCCACCTAGAGATCAGCCA...AAGATTGGACTTCACCTGGGTCCTTAAAATGATAGTGGAGGAAGGGAACCTCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR GCA 90 bp | GAGGATTCAGATTGGAGTCCCACAGTCTGTTCAAATGGGGTTTCTGCATGTTTCCCAAGGCACCTAGAATaGCAAAGGCACCACGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: EDSDWSPTVCSNGVSACFPRHLE*QRHHGA Trigger: CGCTCCGTGGTGCCTTTGGCATTCTAGGTGCCTTGG...GAAACATGCAGAAACCCCATTTGAACAGACTGTGGGACTCCAATCTGAATCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | GAGGATTCAGATTGGAGTCCCACAGTCTGTTCAAATGGGGTTTCTGCATGTTTCAGGGGATGTGGAGGTTaGAGGAGCAGGGTAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: EDSDWSPTVCSNGVSACFRGCGG*RSRVAA Trigger: AGCAGCTACCCTGCTCCTCCAACCTCCACATCCCCT...GAAACATGCAGAAACCCCATTTGAACAGACTGTGGGACTCCAATCTGAATCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| 3UTR CAA 72 bp | GGCCCCATCATCCTCTGTCCACATAGAGGATTCAGATaGGAGTCCCACAGTCTGTTCAAATGGGGTTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: GPIILCPHRGFR*ESHSLFKWGFC Trigger: GCAGAAACCCCATTTGAACAGACTGTGGGACTCCAATCTGAATCCTCTATGTGGACAGAGGATGATGGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | ATTTATAGGTGTGGTCTTCCCTGCCTCTGGGGTCTCAAGCTGGGTCCAACTAATAGAAGCTTTGACTCCTaGCTGCCTGAACACAGACTC | + |
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Preference number: 4 (lower is better) Translates to: IYRCGLPCLWGLKLGPTNRSFDS*LPEHRL Trigger: GAGTCTGTGTTCAGGCAGCCAGGAGTCAAAGCTTCT...ATTAGTTGGACCCAGCTTGAGACCCCAGAGGCAGGGAAGACCACACCTATAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | GTCAATAACTTTATTATAAAAACAGGACCCTCCCTATGTGCCCCGGGACCGCATTCCCCAACTCCAGTCTaGTGTGTCAATGGGACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VNNFIIKTGPSLCAPGPHSPTPV*CVNGTR Trigger: CCTCGTCCCATTGACACACCAGACTGGAGTTGGGGA...ATGCGGTCCCGGGGCACATAGGGAGGGTCCTGTTTTTATAATAAAGTTATTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | ACGCTGGCTTATGACTCAGTTGTCAATAACTTTATTATAAAAACAGGACCCTCCGGGCGTCAGGGAGGATaGGCGAAGCCTCCTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLAYDSVVNNFIIKTGPSGRQGG*AKPPLE Trigger: CTCCAGAGGAGGCTTCGCCCATCCTCCCTGACGCCC...GGAGGGTCCTGTTTTTATAATAAAGTTATTGACAACTGAGTCATAAGCCAGCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | ATTTATAGGTGTGGTCTTCCCTGCCTCTGGGGTCTCAAGCTGGGTCCAACTAATCTTTCTGGCGAAGATTaGGGAGTGTTCATCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IYRCGLPCLWGLKLGPTNLSGED*GVFIQP Trigger: TGGCTGGATGAACACTCCCCAATCTTCGCCAGAAAG...ATTAGTTGGACCCAGCTTGAGACCCCAGAGGCAGGGAAGACCACACCTATAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | GAGTCCCACAGTCTGTTCAAATGGGGTTTCTGCATGTTTCCCAGGCCTGATTTAAGGATGAGAAGGTATTaGCTGTGGACATCCGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ESHSLFKWGFCMFPRPDLRMRRY*LWTSGP Trigger: TGGCCCGGATGTCCACAGCCAATACCTTCTCATCCT...TAAATCAGGCCTGGGAAACATGCAGAAACCCCATTTGAACAGACTGTGGGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR TCA 90 bp | TGGAGTCCCACAGTCTGTTCAAATGGGGTTTCTGCATGTTTCCCAGGCCTGATTTACAGGAACCTGAGGTaGCCTCTGACTTGTAATAGG | + |
|
Preference number: 4 (lower is better) Translates to: WSPTVCSNGVSACFPGLIYRNLR*PLTCNR Trigger: CCTATTACAAGTCAGAGGTCACCTCAGGTTCCTGTA...AATCAGGCCTGGGAAACATGCAGAAACCCCATTTGAACAGACTGTGGGACTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | TCAGTTGTCAATAACTTTATTATAAAAACAGGACCCTCCCTATGTGCCCCGGGAAGCTGGTGGTCACCCTaGGAGGCAAAGTCACGAAGG | + |
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Preference number: 4 (lower is better) Translates to: SVVNNFIIKTGPSLCAPGSWWSP*EAKSRR Trigger: CCTTCGTGACTTTGCCTCCCAGGGTGACCACCAGCT...TCCCGGGGCACATAGGGAGGGTCCTGTTTTTATAATAAAGTTATTGACAACTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | GTATATTTACATAATTTCCGTTTCCTGCCTCTCAAGGACTGGGTCAGCCGACCTGAAGGATGGAGGCTGTaGGGAATAGGGGAAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VYLHNFRFLPLKDWVSRPEGWRL*GIGENW Trigger: CCAGTTTTCCCCTATTCCCCACAGCCTCCATCCTTC...AGGTCGGCTGACCCAGTCCTTGAGAGGCAGGAAACGGAAATTATGTAAATATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR GCA 90 bp | TCAGTTGTCAATAACTTTATTATAAAAACAGGACCCTCCCTATGTGCCCCGGGAGGGATCACACAGTCCTaGCTCCCAGACTGTGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SVVNNFIIKTGPSLCAPGGITQS*LPDCVR Trigger: CCTTACACAGTCTGGGAGGCAGGACTGTGTGATCCC...TCCCGGGGCACATAGGGAGGGTCCTGTTTTTATAATAAAGTTATTGACAACTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | CTCCACTATCATTTTAAGGACCCAGGTGAAGTCCAATCTTGTCACTCTAGCCATAAAGGATTGGGACTGTaGGGAAGAGACTGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHYHFKDPGEVQSCHSSHKGLGL*GRDWRQ Trigger: CTGCCTCCAGTCTCTTCCCCACAGTCCCAATCCTTT...ATGGCTAGAGTGACAAGATTGGACTTCACCTGGGTCCTTAAAATGATAGTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR TCA 90 bp | GAGGATTCAGATTGGAGTCCCACAGTCTGTTCAAATGGGGTTTCTGCATGTTTCATGGGTTCCATGGTGTaGAGAGAGAAAGGCAAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EDSDWSPTVCSNGVSACFMGSMV*REKGKS Trigger: ACTCTTGCCTTTCTCTCTTCACACCATGGAACCCAT...GAAACATGCAGAAACCCCATTTGAACAGACTGTGGGACTCCAATCTGAATCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | ACGCTGGCTTATGACTCAGTTGTCAATAACTTTATTATAAAAACAGGACCCTCCTCAATGGGACGAGGCTaGCTTCTGGTCACTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLAYDSVVNNFIIKTGPSSMGRG*LLVTAG Trigger: CCCTGCAGTGACCAGAAGCCAGCCTCGTCCCATTGA...GGAGGGTCCTGTTTTTATAATAAAGTTATTGACAACTGAGTCATAAGCCAGCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR GCA 90 bp | TATGACTCAGTTGTCAATAACTTTATTATAAAAACAGGACCCTCCCTATGTGCCCCAGCGTACCCGCTGTaGCTGGAGCTTCTGTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YDSVVNNFIIKTGPSLCAPAYPL*LELLCL Trigger: AAGACACAGAAGCTCCAGGCACAGCGGGTACGCTGG...GGCACATAGGGAGGGTCCTGTTTTTATAATAAAGTTATTGACAACTGAGTCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | ACGCTGGCTTATGACTCAGTTGTCAATAACTTTATTATAAAAACAGGACCCTCCAGCTTGTGTTTCAGGTaGGTCAGCCTGTCCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLAYDSVVNNFIIKTGPSSLCFR*VSLSLS Trigger: GGAAAGGGACAGGCTGACCCACCTGAAACACAAGCT...GGAGGGTCCTGTTTTTATAATAAAGTTATTGACAACTGAGTCATAAGCCAGCGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | ACGCTGGCTTATGACTCAGTTGTCAATAACTTTATTATAAAAACAGGACCCTCCAGGAGTACCATGGCATaGAGAAGCTTTGACTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TLAYDSVVNNFIIKTGPSRSTMA*RSFDSW Trigger: CCAGGAGTCAAAGCTTCTCCATGCCATGGTACTCCT...GGAGGGTCCTGTTTTTATAATAAAGTTATTGACAACTGAGTCATAAGCCAGCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CCA 90 bp | TATGACTCAGTTGTCAATAACTTTATTATAAAAACAGGACCCTCCCTATGTGCCCTGAGAACACTCAAGTaGGAGGAGGGGGATCACACA | + |
|
Preference number: 4 (lower is better) Translates to: YDSVVNNFIIKTGPSLCALRTLK*EEGDHT Trigger: TGTGTGATCCCCCTCCTCCCACTTGAGTGTTCTCAG...GGCACATAGGGAGGGTCCTGTTTTTATAATAAAGTTATTGACAACTGAGTCATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 90 bp | GAGCCACCGTCCAGGACAAGTCTGGAGGCTCCTCAGGGCCCTCTGTaGTCTCCATGTCTGCCCACTGGTGGGCTACCAGCTGGGCTACTG | + |
|
Preference number: 5 (lower is better) Translates to: EPPSRTSLEAPQGPL*SPCLPTGGLPAGLL Trigger: CAGTAGCCCAGCTGGTAGCCCACCAGTGGGCAGACATGGAGACCACAGAGGGCCCTGAGGAGCCTCCAGACTTGTCCTGGACGGTGGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS TCA 90 bp | TCGATGGCATCTTGGAGACAGTGCAGCTCACCACGCCCGGGCACCTaGAATTCCTCACAGAAGGTGGCCCCGTCAGGTACCCCGAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SMASWRQCSSPRPGT*NSSQKVAPSGTPRV Trigger: GACCCTCGGGGTACCTGACGGGGCCACCTTCTGTGAGGAATTTCAGGTGCCCGGGCGTGGTGAGCTGCACTGTCTCCAAGATGCCATCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 90 bp | ATGTCCCTTGTGGAGGCCGGACACAGGTTCTCCTCAGCCAGCAGGTaGTACAGGCGAGCCACCGTCCAGGACAAGTCTGGAGGCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: MSLVEAGHRFSSASR*YRRATVQDKSGGSS Trigger: TGAGGAGCCTCCAGACTTGTCCTGGACGGTGGCTCGCCTGTACCACCTGCTGGCTGAGGAGAACCTGTGTCCGGCCTCCACAAGGGACAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 90 bp | GGGAGGCAAAGTCACGAAGGGCCACCTGGTAAGCCATGTCCCTTGTaGAGGCCGGACACAGGTTCTCCTCAGCCAGCAGGTGGTACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRQSHEGPPGKPCPL*RPDTGSPQPAGGTG Trigger: GCCTGTACCACCTGCTGGCTGAGGAGAACCTGTGTCCGGCCTCCACAAGGGACATGGCTTACCAGGTGGCCCTTCGTGACTTTGCCTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 90 bp | AGTGCAGCTCACCACGCCCGGGCACCTGAAATTCCTCACAGAAGGTaGCCCCGTCAGGTACCCCGAGGGTCTCCAGCTTCTCCCGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: SAAHHARAPEIPHRR*PRQVPRGSPASPEY Trigger: GTATTCGGGAGAAGCTGGAGACCCTCGGGGTACCTGACGGGGCCACCTTCTGTGAGGAATTTCAGGTGCCCGGGCGTGGTGAGCTGCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 90 bp | GGAGGCTCCTCAGGGCCCTCTGTGGTCTCCATGTCTGCCCACTGGTaGGCTACCAGCTGGGCTACTGTGTTCATCTTCAAGGACTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GGSSGPSVVSMSAHW*ATSWATVFIFKDSR Trigger: TCTGGAGTCCTTGAAGATGAACACAGTAGCCCAGCTGGTAGCCCACCAGTGGGCAGACATGGAGACCACAGAGGGCCCTGAGGAGCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 90 bp | TCTGGAGGCTCCTCAGGGCCCTCTGTGGTCTCCATGTCTGCCCACTaGTGGGCTACCAGCTGGGCTACTGTGTTCATCTTCAAGGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGGSSGPSVVSMSAH*WATSWATVFIFKDS Trigger: GGAGTCCTTGAAGATGAACACAGTAGCCCAGCTGGTAGCCCACCAGTGGGCAGACATGGAGACCACAGAGGGCCCTGAGGAGCCTCCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 90 bp | GTCCCCAACTCCAGTCTGGTGTGTCAATGGGACGAGGCTGGCTTCTaGTCACTGCAGGGGATGCTGAAGGTGGCTGCAGGGAACCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VPNSSLVCQWDEAGF*SLQGMLKVAAGNPD Trigger: ATCAGGGTTCCCTGCAGCCACCTTCAGCATCCCCTGCAGTGACCAGAAGCCAGCCTCGTCCCATTGACACACCAGACTGGAGTTGGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CAA 90 bp | GCTGAGGGCACCTCAGAGGTGCCTCTGGCCCCATCATCCTCTGTCCACATAGAGCCACTGGGGTCCCCCTaGATATCTGAACTGCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: AEGTSEVPLAPSSSVHIEPLGSP*ISELHR Trigger: TCGGTGCAGTTCAGATATCAAGGGGGACCCCAGTGG...CTCTATGTGGACAGAGGATGATGGGGCCAGAGGCACCTCTGAGGTGCCCTCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CAA 90 bp | ATAGGTGTGGTCTTCCCTGCCTCTGGGGTCTCAAGCTGGGTCCAACTAATAGCCCAGCTTAGGGGAGGCTaGGAGGGATGGTGGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: IGVVFPASGVSSWVQLIAQLRGG*EGWWLG Trigger: GCCCAGCCACCATCCCTCCAAGCCTCCCCTAAGCTG...GGCTATTAGTTGGACCCAGCTTGAGACCCCAGAGGCAGGGAAGACCACACCTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS GCA 90 bp | GGACAAGTCTGGAGGCTCCTCAGGGCCCTCTGTGGTCTCCATGTCTaGCCACTGGTGGGCTACCAGCTGGGCTACTGTGTTCATCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GQVWRLLRALCGLHV*PLVGYQLGYCVHLQ Trigger: TTGAAGATGAACACAGTAGCCCAGCTGGTAGCCCACCAGTGGGCAGACATGGAGACCACAGAGGGCCCTGAGGAGCCTCCAGACTTGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS TCA 90 bp | TGTGTCAATGGGACGAGGCTGGCTTCTGGTCACTGCAGGGGATGCTaGAGGTGGCTGCAGGGAACCCTGATGAGAATGGAGTGGCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CVNGTRLASGHCRGC*RWLQGTLMRMEWLE Trigger: TTCCAGCCACTCCATTCTCATCAGGGTTCCCTGCAGCCACCTTCAGCATCCCCTGCAGTGACCAGAAGCCAGCCTCGTCCCATTGACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS TCA 90 bp | ACAATGCTGTGGAGCAGTCTGGTTGTATCTGGGCTGAGCTGGGCCTaGGAACACTCAAGTGGGAGGAGGGGGATCACACAGTCCTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TMLWSSLVVSGLSWA*EHSSGRRGITQSCL Trigger: GAGGCAGGACTGTGTGATCCCCCTCCTCCCACTTGAGTGTTCTCAGGCCCAGCTCAGCCCAGATACAACCAGACTGCTCCACAGCATTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS TCA 90 bp | CATCCAGCCACACAATGCTGTGGAGCAGTCTGGTTGTATCTGGGCTaGGCTGGGCCTGAGAACACTCAAGTGGGAGGAGGGGGATCACAC | + |
|
Preference number: 5 (lower is better) Translates to: HPATQCCGAVWLYLG*AGPENTQVGGGGSH Trigger: GTGTGATCCCCCTCCTCCCACTTGAGTGTTCTCAGGCCCAGCTCAGCCCAGATACAACCAGACTGCTCCACAGCATTGTGTGGCTGGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS GCA 90 bp | CTTGAGGGTTCTGGCCTCCTGCGCTTTCTTCCAGCGTACCCGCTGTaGCTGGAGCTTCTGTGTCTTGAAGGTGTTTGCCACCTTTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LEGSGLLRFLPAYPL*LELLCLEGVCHLSG Trigger: GCCAGAAAGGTGGCAAACACCTTCAAGACACAGAAGCTCCAGGCACAGCGGGTACGCTGGAAGAAAGCGCAGGAGGCCAGAACCCTCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 90 bp | CAGTCTGGTTGTATCTGGGCTGAGCTGGGCCTGAGAACACTCAAGTaGGAGGAGGGGGATCACACAGTCCTGCCTCCCAGACTGTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: QSGCIWAELGLRTLK*EEGDHTVLPPRLCK Trigger: CTTACACAGTCTGGGAGGCAGGACTGTGTGATCCCCCTCCTCCCACTTGAGTGTTCTCAGGCCCAGCTCAGCCCAGATACAACCAGACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 90 bp | AGGGTTCTGGCCTCCTGCGCTTTCTTCCAGCGTACCCGCTGTGCCTaGAGCTTCTGTGTCTTGAAGGTGTTTGCCACCTTTCTGGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RVLASCAFFQRTRCA*SFCVLKVFATFLAK Trigger: CTTCGCCAGAAAGGTGGCAAACACCTTCAAGACACAGAAGCTCCAGGCACAGCGGGTACGCTGGAAGAAAGCGCAGGAGGCCAGAACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 90 bp | CACCCTGAGGATGAGAAGGTATTGGCTGTGGACATCCGGGCCAGCTaGGTGTTGGAGTCCCCAGTGACAAGTTCTTCCCAAAAGCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: HPEDEKVLAVDIRAS*VLESPVTSSSQKPP Trigger: GGGTGGCTTTTGGGAAGAACTTGTCACTGGGGACTCCAACACCCAGCTGGCCCGGATGTCCACAGCCAATACCTTCTCATCCTCAGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CAA 90 bp | ACCCAGGCGAGGTTCCCTTCCTCCACTATCATTTTAAGGACCCAGGTGAAGTCCGGCCTCATTCTGGAGTaGGCCCAGCTGGTGGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: TQARFPSSTIILRTQVKSGLILE*AQLVVT Trigger: GGTGACCACCAGCTGGGCCAACTCCAGAATGAGGCC...GGACTTCACCTGGGTCCTTAAAATGATAGTGGAGGAAGGGAACCTCGCCTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CAA 90 bp | GCTACTCTGGGGACCCAGGCGAGGTTCCCTTCCTCCACTATCATTTTAAGGACCTGGGACAGTGGACACTaGTGTCTGGAGCAGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ATLGTQARFPSSTIILRTWDSGH*CLEQPG Trigger: CCCTGGCTGCTCCAGACACAAGTGTCCACTGTCCCA...GGTCCTTAAAATGATAGTGGAGGAAGGGAACCTCGCCTGGGTCCCCAGAGTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS TCA 90 bp | ATGAGAATGGAGTGGCTGGAAACCACTGGGGTCCCCCTTGATATCTaGACTGCACCGATCCCAGGCCTCATTCTGGAGTTGGCCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MRMEWLETTGVPLDI*TAPIPGLILELAQL Trigger: CAGCTGGGCCAACTCCAGAATGAGGCCTGGGATCGGTGCAGTTCAGATATCAAGGGGGACCCCAGTGGTTTCCAGCCACTCCATTCTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS GCA 90 bp | CCAGCGTACCCGCTGTGCCTGGAGCTTCTGTGTCTTGAAGGTGTTTaGCACCTTTCTGGCGAAGATTGGGGAGTGTTCATCCAGCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: PAYPLCLELLCLEGV*HLSGEDWGVFIQPH Trigger: GTGTGGCTGGATGAACACTCCCCAATCTTCGCCAGAAAGGTGGCAAACACCTTCAAGACACAGAAGCTCCAGGCACAGCGGGTACGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 90 bp | TGGTGGAGTGTAACGTATGTCCCCAACTCCAGTCTGGTGTGTCAATaGGACGAGGCTGGCTTCTGGTCACTGCAGGGGATGCTGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WWSVTYVPNSSLVCQ*DEAGFWSLQGMLKV Trigger: CACCTTCAGCATCCCCTGCAGTGACCAGAAGCCAGCCTCGTCCCATTGACACACCAGACTGGAGTTGGGGACATACGTTACACTCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CAA 90 bp | AAGTCCTCTGGCTACTCTGGGGACCCAGGCGAGGTTCCCTTCCTCCACTATCATGGTGTGTTACATAGCTaGCTGGGCCCATGGGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KSSGYSGDPGEVPFLHYHGVLHS*LGPWVP Trigger: TGGAACCCATGGGCCCAGCAAGCTATGTAACACACC...ATGATAGTGGAGGAAGGGAACCTCGCCTGGGTCCCCAGAGTAGCCAGAGGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS TCA 90 bp | AACCCTGATGAGAATGGAGTGGCTGGAAACCACTGGGGTCCCCCTTaGTATCTGAACTGCACCGATCCCAGGCCTCATTCTGGAGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: NPDENGVAGNHWGPP*YLNCTDPRPHSGVG Trigger: GCCAACTCCAGAATGAGGCCTGGGATCGGTGCAGTTCAGATATCAAGGGGGACCCCAGTGGTTTCCAGCCACTCCATTCTCATCAGGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CAA 90 bp | CCTCTGGCTACTCTGGGGACCCAGGCGAGGTTCCCTTCCTCCACTATCATTTTACCTTTCTGGCGAAGATaGGGGAGTGTTCATCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PLATLGTQARFPSSTIILPFWRR*GSVHPA Trigger: GGCTGGATGAACACTCCCCAATCTTCGCCAGAAAGG...TAAAATGATAGTGGAGGAAGGGAACCTCGCCTGGGTCCCCAGAGTAGCCAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CAA 90 bp | ACCCAGGCGAGGTTCCCTTCCTCCACTATCATTTTAAGGACCCAGGTGAAGTCCTGTATGCTCTGCTCCTaGAGGGTTCTGGCCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TQARFPSSTIILRTQVKSCMLCS*RVLASC Trigger: GCAGGAGGCCAGAACCCTCAAGGAGCAGAGCATACA...GGACTTCACCTGGGTCCTTAAAATGATAGTGGAGGAAGGGAACCTCGCCTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CAA 90 bp | CTAAGTCCTCTGGCTACTCTGGGGACCCAGGCGAGGTTCCCTTCCTCCACTATCAAAGCCACCCCAAGTTaGTTCATCTCTGCTTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LSPLATLGTQARFPSSTIKATPS*FISACQ Trigger: CTGGCAAGCAGAGATGAACAAACTTGGGGTGGCTTT...GATAGTGGAGGAAGGGAACCTCGCCTGGGTCCCCAGAGTAGCCAGAGGACTTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS TCA 90 bp | GCGCTTTCTTCCAGCGTACCCGCTGTGCCTGGAGCTTCTGTGTCTTaGAGGTGTTTGCCACCTTTCTGGCGAAGATTGGGGAGTGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: ALSSSVPAVPGASVS*RCLPPFWRRLGSVH Trigger: ATGAACACTCCCCAATCTTCGCCAGAAAGGTGGCAAACACCTTCAAGACACAGAAGCTCCAGGCACAGCGGGTACGCTGGAAGAAAGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CAA 90 bp | ATAGGTGTGGTCTTCCCTGCCTCTGGGGTCTCAAGCTGGGTCCAACTAATAGCCTATCTCCTCAGGTTCTaGGCAGCCTTCAGGGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: IGVVFPASGVSSWVQLIAYLLRF*AAFRDK Trigger: CTTGTCCCTGAAGGCTGCCAAGAACCTGAGGAGATA...GGCTATTAGTTGGACCCAGCTTGAGACCCCAGAGGCAGGGAAGACCACACCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 90 bp | TGTGAAGAGAGAAAGGCAAGAGTGGGTGACTGGCTGATCTCTAGGTaGCTGGCCAGTGAGGCAGTGCTGTTGGTGGAGTGTAACGTATGT | + |
|
Preference number: 5 (lower is better) Translates to: CEERKARVGDWLISR*LASEAVLLVECNVC Trigger: ACATACGTTACACTCCACCAACAGCACTGCCTCACTGGCCAGCCACCTAGAGATCAGCCAGTCACCCACTCTTGCCTTTCTCTCTTCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 90 bp | GAGCTTCTGTGTCTTGAAGGTGTTTGCCACCTTTCTGGCGAAGATTaGGGAGTGTTCATCCAGCCACACAATGCTGTGGAGCAGTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: ELLCLEGVCHLSGED*GVFIQPHNAVEQSG Trigger: ACCAGACTGCTCCACAGCATTGTGTGGCTGGATGAACACTCCCCAATCTTCGCCAGAAAGGTGGCAAACACCTTCAAGACACAGAAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CAA 90 bp | ACCCAGGCGAGGTTCCCTTCCTCCACTATCATTTTAAGGACCCAGGTGAAGTCCTTTGTTCATCTCTGCTaGCCAGGCCCTATAGCTATG | + |
|
Preference number: 5 (lower is better) Translates to: TQARFPSSTIILRTQVKSFVHLC*PGPIAM Trigger: CATAGCTATAGGGCCTGGCAAGCAGAGATGAACAAA...GGACTTCACCTGGGTCCTTAAAATGATAGTGGAGGAAGGGAACCTCGCCTGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS-3UTR CAA 90 bp | GTATATTTACATAATTTCCGTTTCCTGCCTCTCAAGGACTGGGTCAGCCGACCTTGGCATGGAGAAGCTTaGACTCCTGGCTGCCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VYLHNFRFLPLKDWVSRPWHGEA*TPGCLN Trigger: GTTCAGGCAGCCAGGAGTCAAAGCTTCTCCATGCCA...AGGTCGGCTGACCCAGTCCTTGAGAGGCAGGAAACGGAAATTATGTAAATATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS TCA 90 bp | GGCATGGATAACCACAAAGTTATAGAATTTCTGATCAGATGTTTCTaGGTGGTCCAAAACAGGGGATGTGGAGGTTGGAGGAGCAGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GMDNHKVIEFLIRCF*VVQNRGCGGWRSRV Trigger: TACCCTGCTCCTCCAACCTCCACATCCCCTGTTTTGGACCACTCAGAAACATCTGATCAGAAATTCTATAACTTTGTGGTTATCCATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 72 bp | CGATCCCAGGCCTCATTCTGGAGTTGGCCCAGCTGGTaGTCACCCTGGGAGGCAAAGTCACGAAGGGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: RSQASFWSWPSW*SPWEAKSRRAT Trigger: GGTGGCCCTTCGTGACTTTGCCTCCCAGGGTGACCACCAGCTGGGCCAACTCCAGAATGAGGCCTGGGATCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 72 bp | CACCGATCCCAGGCCTCATTCTGGAGTTGGCCCAGCTaGTGGTCACCCTGGGAGGCAAAGTCACGAAGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: HRSQASFWSWPS*WSPWEAKSRRA Trigger: GGCCCTTCGTGACTTTGCCTCCCAGGGTGACCACCAGCTGGGCCAACTCCAGAATGAGGCCTGGGATCGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 72 bp | CACCACGCCCGGGCACCTGAAATTCCTCACAGAAGGTaGCCCCGTCAGGTACCCCGAGGGTCTCCAGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: HHARAPEIPHRR*PRQVPRGSPAS Trigger: AGAAGCTGGAGACCCTCGGGGTACCTGACGGGGCCACCTTCTGTGAGGAATTTCAGGTGCCCGGGCGTGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS GCA 72 bp | TGGAGGCTCCTCAGGGCCCTCTGTGGTCTCCATGTCTaGCCACTGGTGGGCTACCAGCTGGGCTACTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: WRLLRALCGLHV*PLVGYQLGYCV Trigger: AACACAGTAGCCCAGCTGGTAGCCCACCAGTGGGCAGACATGGAGACCACAGAGGGCCCTGAGGAGCCTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CAA 90 bp | CCTGGGAGGCAAAGTCACGAAGGGCCACCTGGTAAGCCATGTCCCTaGTGGAGGCCGGACACAGGTTCTCCTCAGCCAGCAGGTGGTACA | + |
|
Preference number: 6 (lower is better) Translates to: PGRQSHEGPPGKPCP*WRPDTGSPQPAGGT Trigger: TGTACCACCTGCTGGCTGAGGAGAACCTGTGTCCGGCCTCCACAAGGGACATGGCTTACCAGGTGGCCCTTCGTGACTTTGCCTCCCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS TCA 72 bp | TCTTGGAGACAGTGCAGCTCACCACGCCCGGGCACCTaGAATTCCTCACAGAAGGTGGCCCCGTCAGGTACC | + |
|
Preference number: 6 (lower is better) Translates to: SWRQCSSPRPGT*NSSQKVAPSGT Trigger: GGTACCTGACGGGGCCACCTTCTGTGAGGAATTTCAGGTGCCCGGGCGTGGTGAGCTGCACTGTCTCCAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS GCA 72 bp | AGCTGTATGCTCTGCTCCTTGAGGGTTCTGGCCTCCTaGGCTTTCTTCCAGCGTACCCGCTGTGCCTGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SCMLCSLRVLAS*AFFQRTRCAWS Trigger: GCTCCAGGCACAGCGGGTACGCTGGAAGAAAGCGCAGGAGGCCAGAACCCTCAAGGAGCAGAGCATACAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 72 bp | CCCCAACTCCAGTCTGGTGTGTCAATGGGACGAGGCTaGCTTCTGGTCACTGCAGGGGATGCTGAAGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PQLQSGVSMGRG*LLVTAGDAEGG Trigger: GCCACCTTCAGCATCCCCTGCAGTGACCAGAAGCCAGCCTCGTCCCATTGACACACCAGACTGGAGTTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 72 bp | TCTGAACTGCACCGATCCCAGGCCTCATTCTGGAGTTaGCCCAGCTGGTGGTCACCCTGGGAGGCAAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SELHRSQASFWS*PSWWSPWEAKS Trigger: TGACTTTGCCTCCCAGGGTGACCACCAGCTGGGCCAACTCCAGAATGAGGCCTGGGATCGGTGCAGTTCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 72 bp | CTCTGTGCATTCAATGGGACAGTGGACACTTGTGTCTaGAGCAGCCAGGGCGTCAGGGAGGATGGGCGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: LCAFNGTVDTCV*SSQGVREDGRS Trigger: GCTTCGCCCATCCTCCCTGACGCCCTGGCTGCTCCAGACACAAGTGTCCACTGTCCCATTGAATGCACAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 72 bp | TGTATCTGGGCTGAGCTGGGCCTGAGAACACTCAAGTaGGAGGAGGGGGATCACACAGTCCTGCCTCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: CIWAELGLRTLK*EEGDHTVLPPR Trigger: TCTGGGAGGCAGGACTGTGTGATCCCCCTCCTCCCACTTGAGTGTTCTCAGGCCCAGCTCAGCCCAGATACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 72 bp | TGGAGTACCACCCTGAGGATGAGAAGGTATTGGCTGTaGACATCCGGGCCAGCTGGGTGTTGGAGTCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: WSTTLRMRRYWL*TSGPAGCWSPQ Trigger: CTGGGGACTCCAACACCCAGCTGGCCCGGATGTCCACAGCCAATACCTTCTCATCCTCAGGGTGGTACTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CAA 72 bp | CAAAGTCACGAAGGGCCACCTGGTAAGCCATGTCCCTaGTGGAGGCCGGACACAGGTTCTCCTCAGCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: QSHEGPPGKPCP*WRPDTGSPQPA Trigger: TGCTGGCTGAGGAGAACCTGTGTCCGGCCTCCACAAGGGACATGGCTTACCAGGTGGCCCTTCGTGACTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CAA 90 bp | CCGTGTCCTGGCCCAGAGCCAGGAGTACCATGGCATGGAGAAGCTTaGACTCCTGGCTGCCTGAACACAGACTCCCCAGCTTGTGTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PCPGPEPGVPWHGEA*TPGCLNTDSPACVS Trigger: TGAAACACAAGCTGGGGAGTCTGTGTTCAGGCAGCCAGGAGTCAAAGCTTCTCCATGCCATGGTACTCCTGGCTCTGGGCCAGGACACGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS TCA 72 bp | TGGAGCAGTCTGGTTGTATCTGGGCTGAGCTGGGCCTaGGAACACTCAAGTGGGAGGAGGGGGATCACACAG | + |
|
Preference number: 6 (lower is better) Translates to: WSSLVVSGLSWA*EHSSGRRGITQ Trigger: CTGTGTGATCCCCCTCCTCCCACTTGAGTGTTCTCAGGCCCAGCTCAGCCCAGATACAACCAGACTGCTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS GCA 72 bp | TCTGGCCTCCTGCGCTTTCTTCCAGCGTACCCGCTGTaGCTGGAGCTTCTGTGTCTTGAAGGTGTTTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SGLLRFLPAYPL*LELLCLEGVCH Trigger: GTGGCAAACACCTTCAAGACACAGAAGCTCCAGGCACAGCGGGTACGCTGGAAGAAAGCGCAGGAGGCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 72 bp | TCCGTGTCCTGGCCCAGAGCCAGGAGTACCATGGCATaGAGAAGCTTTGACTCCTGGCTGCCTGAACACAGA | + |
|
Preference number: 6 (lower is better) Translates to: SVSWPRARSTMA*RSFDSWLPEHR Trigger: TCTGTGTTCAGGCAGCCAGGAGTCAAAGCTTCTCCATGCCATGGTACTCCTGGCTCTGGGCCAGGACACGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 72 bp | TTGATATCTGAACTGCACCGATCCCAGGCCTCATTCTaGAGTTGGCCCAGCTGGTGGTCACCCTGGGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LISELHRSQASF*SWPSWWSPWEA Trigger: TGCCTCCCAGGGTGACCACCAGCTGGGCCAACTCCAGAATGAGGCCTGGGATCGGTGCAGTTCAGATATCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CAA 90 bp | GGTGACTGGCTGATCTCTAGGTGGCTGGCCAGTGAGGCAGTGCTGTaGGTGGAGTGTAACGTATGTCCCCAACTCCAGTCTGGTGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GDWLISRWLASEAVL*VECNVCPQLQSGVS Trigger: TGACACACCAGACTGGAGTTGGGGACATACGTTACACTCCACCAACAGCACTGCCTCACTGGCCAGCCACCTAGAGATCAGCCAGTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS TCA 72 bp | GAGTGGCTGGAAACCACTGGGGTCCCCCTTGATATCTaGACTGCACCGATCCCAGGCCTCATTCTGGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: EWLETTGVPLDI*TAPIPGLILEL Trigger: CAACTCCAGAATGAGGCCTGGGATCGGTGCAGTTCAGATATCAAGGGGGACCCCAGTGGTTTCCAGCCACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS TCA 72 bp | TCCAGCGTACCCGCTGTGCCTGGAGCTTCTGTGTCTTaGAGGTGTTTGCCACCTTTCTGGCGAAGATTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSVPAVPGASVS*RCLPPFWRRLG Trigger: CCCCAATCTTCGCCAGAAAGGTGGCAAACACCTTCAAGACACAGAAGCTCCAGGCACAGCGGGTACGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS GCA 72 bp | GTAGGCAGCAGATATGGCTGCCACGTTTTGCCGCTCTaGCTCCAGCTGTATGCTCTGCTCCTTGAGGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: VGSRYGCHVLPL*LQLYALLLEGS Trigger: AGAACCCTCAAGGAGCAGAGCATACAGCTGGAGGCAGAGCGGCAAAACGTGGCAGCCATATCTGCTGCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 72 bp | GTGGTCTCCATGTCTGCCCACTGGTGGGCTACCAGCTaGGCTACTGTGTTCATCTTCAAGGACTCCAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: VVSMSAHWWATS*ATVFIFKDSRE Trigger: CTCTCTGGAGTCCTTGAAGATGAACACAGTAGCCCAGCTGGTAGCCCACCAGTGGGCAGACATGGAGACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 72 bp | GTAACGTATGTCCCCAACTCCAGTCTGGTGTGTCAATaGGACGAGGCTGGCTTCTGGTCACTGCAGGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: VTYVPNSSLVCQ*DEAGFWSLQGM Trigger: CATCCCCTGCAGTGACCAGAAGCCAGCCTCGTCCCATTGACACACCAGACTGGAGTTGGGGACATACGTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 72 bp | CAGCCACACAATGCTGTGGAGCAGTCTGGTTGTATCTaGGCTGAGCTGGGCCTGAGAACACTCAAGTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: QPHNAVEQSGCI*AELGLRTLKWE Trigger: CTCCCACTTGAGTGTTCTCAGGCCCAGCTCAGCCCAGATACAACCAGACTGCTCCACAGCATTGTGTGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 72 bp | GCCTCCTGCGCTTTCTTCCAGCGTACCCGCTGTGCCTaGAGCTTCTGTGTCTTGAAGGTGTTTGCCACCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ASCAFFQRTRCA*SFCVLKVFATF Trigger: AAAGGTGGCAAACACCTTCAAGACACAGAAGCTCCAGGCACAGCGGGTACGCTGGAAGAAAGCGCAGGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CAA 72 bp | GGAAAACTGGAGTACCACCCTGAGGATGAGAAGGTATaGGCTGTGGACATCCGGGCCAGCTGGGTGTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GKLEYHPEDEKV*AVDIRASWVLE Trigger: CTCCAACACCCAGCTGGCCCGGATGTCCACAGCCAATACCTTCTCATCCTCAGGGTGGTACTCCAGTTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CAA 90 bp | TGGAGAAGCTTTGACTCCTGGCTGCCTGAACACAGACTCCCCAGCTaGTGTTTCAGGTGGGTCAGCCTGTCCCTTTCCAAGGCACCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: WRSFDSWLPEHRLPS*CFRWVSLSLSKAPR Trigger: TCTAGGTGCCTTGGAAAGGGACAGGCTGACCCACCTGAAACACAAGCTGGGGAGTCTGTGTTCAGGCAGCCAGGAGTCAAAGCTTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS TCA 72 bp | AAGCTAGCAGTCAGGAGCAGGATCGTGAACCCCGAGTaGTCGATGGCATCTTGGAGACAGTGCAGCTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: KLAVRSRIVNPE*SMASWRQCSSP Trigger: TGGTGAGCTGCACTGTCTCCAAGATGCCATCGATCACTCGGGGTTCACGATCCTGCTCCTGACTGCTAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS GCA 72 bp | GAACACTCAAGTGGGAGGAGGGGGATCACACAGTCCTaGCTCCCAGACTGTGTAAGGCTGTTCATGAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: EHSSGRRGITQS*LPDCVRLFMRA Trigger: TGCTCTCATGAACAGCCTTACACAGTCTGGGAGGCAGGACTGTGTGATCCCCCTCCTCCCACTTGAGTGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 72 bp | AAGATTGGGGAGTGTTCATCCAGCCACACAATGCTGTaGAGCAGTCTGGTTGTATCTGGGCTGAGCTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: KIGECSSSHTML*SSLVVSGLSWA Trigger: GGCCCAGCTCAGCCCAGATACAACCAGACTGCTCCACAGCATTGTGTGGCTGGATGAACACTCCCCAATCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 72 bp | GAAAACTGGAGTACCACCCTGAGGATGAGAAGGTATTaGCTGTGGACATCCGGGCCAGCTGGGTGTTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: ENWSTTLRMRRY*LWTSGPAGCWS Trigger: ACTCCAACACCCAGCTGGCCCGGATGTCCACAGCCAATACCTTCTCATCCTCAGGGTGGTACTCCAGTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CAA 72 bp | TTTGACTCCTGGCTGCCTGAACACAGACTCCCCAGCTaGTGTTTCAGGTGGGTCAGCCTGTCCCTTTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: FDSWLPEHRLPS*CFRWVSLSLSK Trigger: CTTGGAAAGGGACAGGCTGACCCACCTGAAACACAAGCTGGGGAGTCTGTGTTCAGGCAGCCAGGAGTCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CAA 72 bp | TTCCAGCGTACCCGCTGTGCCTGGAGCTTCTGTGTCTaGAAGGTGTTTGCCACCTTTCTGGCGAAGATTGGG | + |
|
Preference number: 6 (lower is better) Translates to: FQRTRCAWSFCV*KVFATFLAKIG Trigger: CCCAATCTTCGCCAGAAAGGTGGCAAACACCTTCAAGACACAGAAGCTCCAGGCACAGCGGGTACGCTGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CAA 90 bp | TGCGCTTTCTTCCAGCGTACCCGCTGTGCCTGGAGCTTCTGTGTCTaGAAGGTGTTTGCCACCTTTCTGGCGAAGATTGGGGAGTGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CAFFQRTRCAWSFCV*KVFATFLAKIGECS Trigger: TGAACACTCCCCAATCTTCGCCAGAAAGGTGGCAAACACCTTCAAGACACAGAAGCTCCAGGCACAGCGGGTACGCTGGAAGAAAGCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS GCA 72 bp | GGAGTACCATGGCATGGAGAAGCTTTGACTCCTGGCTaGCTGAACACAGACTCCCCAGCTTGTGTTTCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GVPWHGEALTPG*LNTDSPACVSG Trigger: ACCTGAAACACAAGCTGGGGAGTCTGTGTTCAGGCAGCCAGGAGTCAAAGCTTCTCCATGCCATGGTACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS GCA 72 bp | CCGCTGTGCCTGGAGCTTCTGTGTCTTGAAGGTGTTTaGCACCTTTCTGGCGAAGATTGGGGAGTGTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: PLCLELLCLEGV*HLSGEDWGVFI Trigger: GATGAACACTCCCCAATCTTCGCCAGAAAGGTGGCAAACACCTTCAAGACACAGAAGCTCCAGGCACAGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 72 bp | GGTGTGTTACATAGCTTGCTGGGCCCATGGGTTCCATaGTGTGAAGAGAGAAAGGCAAGAGTGGGTGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: GVLHSLLGPWVP*CEERKARVGDW Trigger: CCAGTCACCCACTCTTGCCTTTCTCTCTTCACACCATGGAACCCATGGGCCCAGCAAGCTATGTAACACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CCA 72 bp | TGTCTTGAAGGTGTTTGCCACCTTTCTGGCGAAGATTaGGGAGTGTTCATCCAGCCACACAATGCTGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: CLEGVCHLSGED*GVFIQPHNAVE Trigger: CTCCACAGCATTGTGTGGCTGGATGAACACTCCCCAATCTTCGCCAGAAAGGTGGCAAACACCTTCAAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS GCA 72 bp | GTTCTTCCCAAAAGCCACCCCAAGTTTGTTCATCTCTaGTTGCCAGGCCCTATAGCTATGGACATAGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VLPKSHPKFVHL*LPGPIAMDIGC Trigger: ACAGCCTATGTCCATAGCTATAGGGCCTGGCAAGCAGAGATGAACAAACTTGGGGTGGCTTTTGGGAAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS CAA 72 bp | CTTCCCAAAAGCCACCCCAAGTTTGTTCATCTCTGCTaGCCAGGCCCTATAGCTATGGACATAGGCTGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: LPKSHPKFVHLC*PGPIAMDIGCV Trigger: TACACAGCCTATGTCCATAGCTATAGGGCCTGGCAAGCAGAGATGAACAAACTTGGGGTGGCTTTTGGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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| CDS TCA 72 bp | AACCACAAAGTTATAGAATTTCTGATCAGATGTTTCTaGGTGGTCCAAAACAGGGGATGTGGAGGTTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: NHKVIEFLIRCF*VVQNRGCGGWR Trigger: CCTCCAACCTCCACATCCCCTGTTTTGGACCACTCAGAAACATCTGATCAGAAATTCTATAACTTTGTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058136.9 |
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