Pregenerated sensors for TIAL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030846Ensembl transcript IDs: ENSMUST00000033135.9, ENSMUST00000106226.9, ENSMUST00000106228.8, ENSMUST00000123666.8, ENSMUST00000133089.8, ENSMUST00000133444.8, ENSMUST00000141126.8, ENSMUST00000165023.8, ENSMUST00000205278.2, ENSMUST00000205835.2
Found 253 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCTCACTGTGTCGGGAAGCTTGCCATTCCATACCCAGCTTGGTTTaGAGGAGGTATTACAGGGGGAGGGGCTTGTCCTTGAGGAGGCTG | + |
|
Preference number: 1 (lower is better) Translates to: SSLCREACHSIPSLV*RRYYRGRGLSLRRL Trigger: CAGCCTCCTCAAGGACAAGCCCCTCCCCCTGTAATACCTCCTCCAAACCAAGCTGGGTATGGAATGGCAAGCTTCCCGACACAGTGAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133444.8 |
||
| 3UTR CCA 90 bp | CATGGACTTCTTCTGAAATCACACTTTCTCCTGCTGCCTTCTATGTaGTCCGCCTCAGGGACGGGAGGGGAGTATCAGGATTCAGGACGA | + |
|
Preference number: 1 (lower is better) Translates to: HGLLLKSHFLLLPSM*SASGTGGEYQDSGR Trigger: TCGTCCTGAATCCTGATACTCCCCTCCCGTCCCTGAGGCGGACCACATAGAAGGCAGCAGGAGAAAGTGTGATTTCAGAAGAAGTCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| 3UTR GCA 90 bp | AATTACAATCGTGTTTCGAGTCCCAGCTCACTGTGTCGGGAAGCTTaGCATTCCATACCCAGCTTGGTTTGGAGGAGGTATTACAGGGGG | + |
|
Preference number: 1 (lower is better) Translates to: NYNRVSSPSSLCREA*HSIPSLVWRRYYRG Trigger: CCCCCTGTAATACCTCCTCCAAACCAAGCTGGGTATGGAATGGCAAGCTTCCCGACACAGTGAGCTGGGACTCGAAACACGATTGTAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133444.8 |
||
| 3UTR GCA 90 bp | CCACGGCTGCCCATATACTCCATAGGGTGGTACTTGCCACCCATTTaGCATATACTGTCCATACTGTTGTGGGTTTCCATACACTTGGCT | + |
|
Preference number: 1 (lower is better) Translates to: PRLPIYSIGWYLPPI*HILSILLWVSIHLA Trigger: AGCCAAGTGTATGGAAACCCACAACAGTATGGACAGTATATGGCAAATGGGTGGCAAGTACCACCCTATGGAGTATATGGGCAGCCGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123666.8 ENSMUST00000133089.8 ENSMUST00000133444.8 |
||
| 3UTR CCA 90 bp | TCCAAATCCTTGTTGGTTCCACGGCTGCCCATATACTCCATAGGGTaGTACTTGCCACCCATTTGCCATATACTGTCCATACTGTTGTGG | + |
|
Preference number: 1 (lower is better) Translates to: SKSLLVPRLPIYSIG*YLPPICHILSILLW Trigger: CCACAACAGTATGGACAGTATATGGCAAATGGGTGGCAAGTACCACCCTATGGAGTATATGGGCAGCCGTGGAACCAACAAGGATTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133444.8 |
||
| 3UTR CCA 90 bp | TTTAGTTGGCCTCTCACTGGCGGCAAACATAAAGATCAGACGGACTaGCACCGAGGAAATGCTAGTAGAAAAGGATTCAAGCACAGACGA | + |
|
Preference number: 1 (lower is better) Translates to: FSWPLTGGKHKDQTD*HRGNASRKGFKHRR Trigger: TCGTCTGTGCTTGAATCCTTTTCTACTAGCATTTCCTCGGTGCCAGTCCGTCTGATCTTTATGTTTGCCGCCAGTGAGAGGCCAACTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106226.9 |
||
| 3UTR TCA 90 bp | ATAACATATTTCTTCCACAGCGACTCCCACATCATGGACTTCTTCTaGAATCACACTTTCTCCTGCTGCCTTCTATGTGGTCCGCCTCAG | + |
|
Preference number: 1 (lower is better) Translates to: ITYFFHSDSHIMDFF*NHTFSCCLLCGPPQ Trigger: CTGAGGCGGACCACATAGAAGGCAGCAGGAGAAAGTGTGATTTCAGAAGAAGTCCATGATGTGGGAGTCGCTGTGGAAGAAATATGTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| 3UTR TCA 90 bp | TTCTGTGTAGTCATTTGTGTCCTTCTCCTTTTACATGGCCAACCGTaGAGACGTGGAGACATCAGTGTTAACACTGCTACTGAGCACTGC | + |
|
Preference number: 1 (lower is better) Translates to: FCVVICVLLLLHGQP*RRGDISVNTATEHC Trigger: GCAGTGCTCAGTAGCAGTGTTAACACTGATGTCTCCACGTCTTCACGGTTGGCCATGTAAAAGGAGAAGGACACAAATGACTACACAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 |
||
| 3UTR CCA 90 bp | ATTGAAAGACTTACTTCAACTGTGGTTTACAGCTTTGGCTTTAGTTaGCCTCTCACTGGCGGCAAACATAAAGATCAGACGGACTGGCAC | + |
|
Preference number: 1 (lower is better) Translates to: IERLTSTVVYSFGFS*PLTGGKHKDQTDWH Trigger: GTGCCAGTCCGTCTGATCTTTATGTTTGCCGCCAGTGAGAGGCCAACTAAAGCCAAAGCTGTAAACCACAGTTGAAGTAAGTCTTTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106226.9 |
||
| 3UTR GCA 90 bp | TGTCTTAATATGGACCACCAACAATCGTTCAAGAACCTTCTACGATaGTGGTCCTTATTCAGGCTGCACGCTTTCAGTCTGGCTTCATTT | + |
|
Preference number: 1 (lower is better) Translates to: CLNMDHQQSFKNLLR*WSLFRLHAFSLASF Trigger: AAATGAAGCCAGACTGAAAGCGTGCAGCCTGAATAAGGACCAGCATCGTAGAAGGTTCTTGAACGATTGTTGGTGGTCCATATTAAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| 3UTR CCA 90 bp | CTTAATATGGACCACCAACAATCGTTCAAGAACCTTCTACGATGCTaGTCCTTATTCAGGCTGCACGCTTTCAGTCTGGCTTCATTTTCT | + |
|
Preference number: 1 (lower is better) Translates to: LNMDHQQSFKNLLRC*SLFRLHAFSLASFS Trigger: AGAAAATGAAGCCAGACTGAAAGCGTGCAGCCTGAATAAGGACCAGCATCGTAGAAGGTTCTTGAACGATTGTTGGTGGTCCATATTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| 3UTR CCA 90 bp | TTGACGAACACAGGAAAGAAAAGGCAACAGTTCTTAGGCTTAAAGTaGACGGAGGGCACAAACTCAAATCTGCATTGTAAGACAGTCTGG | + |
|
Preference number: 1 (lower is better) Translates to: LTNTGKKRQQFLGLK*TEGTNSNLHCKTVW Trigger: CCAGACTGTCTTACAATGCAGATTTGAGTTTGTGCCCTCCGTCCACTTTAAGCCTAAGAACTGTTGCCTTTTCTTTCCTGTGTTCGTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106226.9 |
||
| 3UTR GCA 90 bp | CACCAAGATAAATCTCAAGAAACTATGAAGAGACATTTCCTTGCATaGCAAAGAGTCTCTCTGCTGTTCTTGACGAACACAGGAAAGAAA | + |
|
Preference number: 1 (lower is better) Translates to: HQDKSQETMKRHFLA*QRVSLLFLTNTGKK Trigger: TTTCTTTCCTGTGTTCGTCAAGAACAGCAGAGAGACTCTTTGGCATGCAAGGAAATGTCTCTTCATAGTTTCTTGAGATTTATCTTGGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106226.9 |
||
| 3UTR GCA 90 bp | TTTGTTATAAAAAGATACAAAACCATAGCCTTTGGACTTTCCAGTTaGCATGTCTTTAACTACCCGGGCATCCATGGCCTGTTAACAGAT | + |
|
Preference number: 1 (lower is better) Translates to: FVIKRYKTIAFGLSS*HVFNYPGIHGLLTD Trigger: ATCTGTTAACAGGCCATGGATGCCCGGGTAGTTAAAGACATGGCAACTGGAAAGTCCAAAGGCTATGGTTTTGTATCTTTTTATAACAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000123666.8 ENSMUST00000133089.8 ENSMUST00000205278.2 |
||
| 3UTR TCA 90 bp | ACACATAGGATTTTATCTATTTCACATTCCCATTGTATAGAACTATaGGGCAGACTGTATCCACATAGACTGAAAGATGTCAGGGGAGCA | + |
|
Preference number: 1 (lower is better) Translates to: THRILSISHSHCIEL*GRLYPHRLKDVRGA Trigger: TGCTCCCCTGACATCTTTCAGTCTATGTGGATACAGTCTGCCTCATAGTTCTATACAATGGGAATGTGAAATAGATAAAATCCTATGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106226.9 |
||
| 3UTR CAA 90 bp | CCCAGCTTGGTTTGGAGGAGGTATTACAGGGGGAGGGGCTTGTCCTaGAGGAGGCTGAGCACCAAATCCACCCATCCAAGCAGCAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: PSLVWRRYYRGRGLS*RRLSTKSTHPSSRR Trigger: CCTTCTGCTGCTTGGATGGGTGGATTTGGTGCTCAGCCTCCTCAAGGACAAGCCCCTCCCCCTGTAATACCTCCTCCAAACCAAGCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133444.8 |
||
| 3UTR CAA 90 bp | TCCATACCCAGCTTGGTTTGGAGGAGGTATTACAGGGGGAGGGGCTaGTCCTTGAGGAGGCTGAGCACCAAATCCACCCATCCAAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SIPSLVWRRYYRGRG*SLRRLSTKSTHPSS Trigger: GCTGCTTGGATGGGTGGATTTGGTGCTCAGCCTCCTCAAGGACAAGCCCCTCCCCCTGTAATACCTCCTCCAAACCAAGCTGGGTATGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133444.8 |
||
| 3UTR CAA 90 bp | CAGCTCACTGTGTCGGGAAGCTTGCCATTCCATACCCAGCTTGGTTaGGAGGAGGTATTACAGGGGGAGGGGCTTGTCCTTGAGGAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: QLTVSGSLPFHTQLG*EEVLQGEGLVLEEA Trigger: AGCCTCCTCAAGGACAAGCCCCTCCCCCTGTAATACCTCCTCCAAACCAAGCTGGGTATGGAATGGCAAGCTTCCCGACACAGTGAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133444.8 |
||
| 3UTR CAA 90 bp | AGTCCCAGCTCACTGTGTCGGGAAGCTTGCCATTCCATACCCAGCTaGGTTTGGAGGAGGTATTACAGGGGGAGGGGCTTGTCCTTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: SPSSLCREACHSIPS*VWRRYYRGRGLSLR Trigger: CCTCAAGGACAAGCCCCTCCCCCTGTAATACCTCCTCCAAACCAAGCTGGGTATGGAATGGCAAGCTTCCCGACACAGTGAGCTGGGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133444.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGTCCGCCTCAGGGACGGGAGGGGAGTATCAGGATTCAGGACGAACTGATGTGCATGTCTTCAGAGTGTaGCAGGAGACTGCAGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: WSASGTGGEYQDSGRTDVHVFRV*QETAAC Trigger: ACAGGCTGCAGTCTCCTGTCACACTCTGAAGACATG...CACATCAGTTCGTCCTGAATCCTGATACTCCCCTCCCGTCCCTGAGGCGGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCCATTCCATACCCAGCTTGGTTTGGAGGAGGTATTACAGGGGGAGGGGCTTGCATGTCTTCAGAGTGTaGCAGGAGACTGCAGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: CHSIPSLVWRRYYRGRGLHVFRV*QETAAC Trigger: ACAGGCTGCAGTCTCCTGTCACACTCTGAAGACATG...CAAGCCCCTCCCCCTGTAATACCTCCTCCAAACCAAGCTGGGTATGGAATGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133444.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTGTTGTGGGTTTCCATACACTTGGCTCCACTGGCCCCACTGACTGTAGTCAATGGCCCAATTGGTTCTaGTTTGTCGACCTCCCAACC | + |
|
Preference number: 2 (lower is better) Translates to: TVVGFHTLGSTGPTDCSQWPNWF*FVDLPT Trigger: GGTTGGGAGGTCGACAAATCAGAACCAATTGGGCCA...TTGACTACAGTCAGTGGGGCCAGTGGAGCCAAGTGTATGGAAACCCACAACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133089.8 |
||
| 3UTR CAA 90 bp | GAATTACAATCGTGTTTCGAGTCCCAGCTCACTGTGTCGGGAAGCTaGCCATTCCATACCCAGCTTGGTTTGGAGGAGGTATTACAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: ELQSCFESQLTVSGS*PFHTQLGLEEVLQG Trigger: CCCCTGTAATACCTCCTCCAAACCAAGCTGGGTATGGAATGGCAAGCTTCCCGACACAGTGAGCTGGGACTCGAAACACGATTGTAATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133444.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGACGGGAGGGGAGTATCAGGATTCAGGACGAACTGATGTGATTCTCAGTTTTCATGTCTTCAGAGTGTaGCAGGAGACTGCAGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: GTGGEYQDSGRTDVILSFHVFRV*QETAAC Trigger: ACAGGCTGCAGTCTCCTGTCACACTCTGAAGACATG...AAAACTGAGAATCACATCAGTTCGTCCTGAATCCTGATACTCCCCTCCCGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| 3UTR-3UTR TCA 90 bp | ACGGCTGCCCATATACTCCATAGGGTGGTACTTGCCACCCATTTGCCATATACTCATGTCTTCAGAGTGTaGCAGGAGACTGCAGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: TAAHILHRVVLATHLPYTHVFRV*QETAAC Trigger: ACAGGCTGCAGTCTCCTGTCACACTCTGAAGACATG...AGTATATGGCAAATGGGTGGCAAGTACCACCCTATGGAGTATATGGGCAGCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133444.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTGTCCATACTGTTGTGGGTTTCCATACACTTGGCTCCACTGGCCCCACTGACCTACCCGGGCATCCATaGCCTGTTAACAGATTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: TVHTVVGFHTLGSTGPTDLPGHP*PVNRFL Trigger: AAGAAATCTGTTAACAGGCCATGGATGCCCGGGTAG...GTCAGTGGGGCCAGTGGAGCCAAGTGTATGGAAACCCACAACAGTATGGACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133089.8 |
||
| 3UTR CAA 90 bp | TCCACGGCTGCCCATATACTCCATAGGGTGGTACTTGCCACCCATTaGCCATATACTGTCCATACTGTTGTGGGTTTCCATACACTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: STAAHILHRVVLATH*PYTVHTVVGFHTLG Trigger: GCCAAGTGTATGGAAACCCACAACAGTATGGACAGTATATGGCAAATGGGTGGCAAGTACCACCCTATGGAGTATATGGGCAGCCGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123666.8 ENSMUST00000133089.8 ENSMUST00000133444.8 |
||
| 3UTR CAA 90 bp | TCCTTGTTGGTTCCACGGCTGCCCATATACTCCATAGGGTGGTACTaGCCACCCATTTGCCATATACTGTCCATACTGTTGTGGGTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: SLLVPRLPIYSIGWY*PPICHILSILLWVS Trigger: GGAAACCCACAACAGTATGGACAGTATATGGCAAATGGGTGGCAAGTACCACCCTATGGAGTATATGGGCAGCCGTGGAACCAACAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123666.8 ENSMUST00000133089.8 ENSMUST00000133444.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGCCTGTGGTGAATTACAATCGTGTTTCGAGTCCCAGCTCACTGTGTCGGGAAGCAGCAGAAGGGGATTaGTCTACTCCAAATCCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: QPVVNYNRVSSPSSLCREAAEGD*STPNPC Trigger: ACAAGGATTTGGAGTAGATCAATCCCCTTCTGCTGC...TTCCCGACACAGTGAGCTGGGACTCGAAACACGATTGTAATTCACCACAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133444.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCACATGTCCTTCGATTGTAGTGCCGTTCACAGAGACAATGGCGTGGGCCGCATTTGGACTTTCCAGTTaGCATGTCTTTAACTACCCG | + |
|
Preference number: 2 (lower is better) Translates to: TTCPSIVVPFTETMAWAAFGLSS*HVFNYP Trigger: CGGGTAGTTAAAGACATGGCAACTGGAAAGTCCAAA...TGCGGCCCACGCCATTGTCTCTGTGAACGGCACTACAATCGAAGGACATGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133089.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGCCTGTGGTGAATTACAATCGTGTTTCGAGTCCCAGCTCACTGTGTCGGGAAATTCCATACCCAGCTTaGTTTGGAGGAGGTATTACA | + |
|
Preference number: 2 (lower is better) Translates to: QPVVNYNRVSSPSSLCREIPYPA*FGGGIT Trigger: TGTAATACCTCCTCCAAACCAAGCTGGGTATGGAAT...TTCCCGACACAGTGAGCTGGGACTCGAAACACGATTGTAATTCACCACAGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133444.8 |
||
| 3UTR-3UTR TCA 90 bp | AGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATCATGTCTTCAGAGTGTaGCAGGAGACTGCAGCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: RHVSFTKQSCAKGSKHFNHVFRV*QETAAC Trigger: ACAGGCTGCAGTCTCCTGTCACACTCTGAAGACATG...ATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000123666.8 ENSMUST00000133444.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCAGAACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCCAGGACGAACTGATGTaGTTCTCAGTTTTTCACGAT | + |
|
Preference number: 2 (lower is better) Translates to: GRTRRHVSFTKQSCAKGSQDELM*FSVFHD Trigger: ATCGTGAAAAACTGAGAATCACATCAGTTCGTCCTG...GGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGTTCTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTGCCACCCATTTGCCATATACTGTCCATACTGTTGTGGGTTTCCATACACTTCTACCCGGGCATCCATaGCCTGTTAACAGATTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LATHLPYTVHTVVGFHTLLPGHP*PVNRFL Trigger: AAGAAATCTGTTAACAGGCCATGGATGCCCGGGTAG...AAGTGTATGGAAACCCACAACAGTATGGACAGTATATGGCAAATGGGTGGCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133089.8 |
||
| 3UTR-3UTR GCA 90 bp | ATAGGGTGGTACTTGCCACCCATTTGCCATATACTGTCCATACTGTTGTGGGTTCCCCATATGCACAATTaGATTCTCTGCATCCAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: IGWYLPPICHILSILLWVPHMHN*ILCIQF Trigger: AAACTGGATGCAGAGAATGCAATTGTGCATATGGGG...AACCCACAACAGTATGGACAGTATATGGCAAATGGGTGGCAAGTACCACCCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133089.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTGCAGCCTGTGGTGAATTACAATCGTGTTTCGAGTCCCAGCTCACTGTGTCGCATCATTTTGGAGTTTaGGCAGCTGTAAATTTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: TAACGELQSCFESQLTVSHHFGV*AAVNFE Trigger: TTCAAAATTTACAGCTGCCCAAACTCCAAAATGATG...CGACACAGTGAGCTGGGACTCGAAACACGATTGTAATTCACCACAGGCTGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123666.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTAGTTTCTTGTGTACTTTTAGGGGCAGGTGGTTTACGTGTGGCCCAATTGGTCATCATTTTGGAGTTTaGGCAGAACTGAGTTCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: VSFLCTFRGRWFTCGPIGHHFGV*AELSSS Trigger: ACTGGAACTCAGTTCTGCCCAAACTCCAAAATGATG...ACCAATTGGGCCACACGTAAACCACCTGCCCCTAAAAGTACACAAGAAACTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000205278.2 |
||
| 3UTR-3UTR CCA 90 bp | TACTCCATAGGGTGGTACTTGCCACCCATTTGCCATATACTGTCCATACTGTTGCGAATAGCCCTTCTCTaGAAAAACTCGTATTTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: YSIGWYLPPICHILSILLRIALL*KNSYFH Trigger: ATGGAAATACGAGTTTTTCCAGAGAAGGGCTATTCG...CAACAGTATGGACAGTATATGGCAAATGGGTGGCAAGTACCACCCTATGGAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133089.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGACTGTAGTCAACCTGTTGGAAGTTTTTAGTCATATCAGGAGATTCTTTACCGTTTGTCTCATAAGTTaGTCTGTCAGCCCCGAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LTVVNLLEVFSHIRRFFTVCLIS*SVSPEA Trigger: TGCTTCGGGGCTGACAGATCAACTTATGAGACAAAC...GGTAAAGAATCTCCTGATATGACTAAAAACTTCCAACAGGTTGACTACAGTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133089.8 |
||
| 3UTR-3UTR TCA 90 bp | GGACTTGACTGGTTTACTACATCTTCAAATCTCAACTGCTTAGTGTTAGTTTCTGAGTTTGGGCAGAACTaGGTTCCAGTGTGCACAGTT | + |
|
Preference number: 2 (lower is better) Translates to: GLDWFTTSSNLNCLVLVSEFGQN*VPVCTV Trigger: AACTGTGCACACTGGAACTCAGTTCTGCCCAAACTC...AGAAACTAACACTAAGCAGTTGAGATTTGAAGATGTAGTAAACCAGTCAAGTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205278.2 |
||
| 3UTR-3UTR CCA 90 bp | GGACTTGACTGGTTTACTACATCTTCAAATCTCAACTGCTTAGTGTTAGTTTCTCTACCCGGGCATCCATaGCCTGTTAACAGATTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: GLDWFTTSSNLNCLVLVSLPGHP*PVNRFL Trigger: AAGAAATCTGTTAACAGGCCATGGATGCCCGGGTAG...AGAAACTAACACTAAGCAGTTGAGATTTGAAGATGTAGTAAACCAGTCAAGTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123666.8 ENSMUST00000133089.8 ENSMUST00000205278.2 |
||
| 3UTR CAA 90 bp | AAAGATTTGTATGAAATTAAATTAAGGCTTCTTCTGTGTAGTCATTaGTGTCCTTCTCCTTTTACATGGCCAACCGTGAAGACGTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: KDLYEIKLRLLLCSH*CPSPFTWPTVKTWR Trigger: TCTCCACGTCTTCACGGTTGGCCATGTAAAAGGAGAAGGACACAAATGACTACACAGAAGAAGCCTTAATTTAATTTCATACAAATCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 |
||
| 3UTR CAA 90 bp | CTTGTGCATACACAGGCCAACAGGTTTAACACACTATCAAAACATTaGCACCTCCTAGTTGTCACAATTGAAACACATAGGATTTTATCT | + |
|
Preference number: 2 (lower is better) Translates to: LVHTQANRFNTLSKH*HLLVVTIETHRILS Trigger: AGATAAAATCCTATGTGTTTCAATTGTGACAACTAGGAGGTGCAAATGTTTTGATAGTGTGTTAAACCTGTTGGCCTGTGTATGCACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106226.9 |
||
| 3UTR-3UTR CCA 90 bp | GGACTTGACTGGTTTACTACATCTTCAAATCTCAACTGCTTAGTGTTAGTTTCTTCTCTATCATCATTTTaGAGTTTGGGCAGAACTGAG | + |
|
Preference number: 2 (lower is better) Translates to: GLDWFTTSSNLNCLVLVSSLSSF*SLGRTE Trigger: CTCAGTTCTGCCCAAACTCCAAAATGATGATAGAGA...AGAAACTAACACTAAGCAGTTGAGATTTGAAGATGTAGTAAACCAGTCAAGTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205278.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTGTCCTTGAGGAGGCTGAGCACCAAATCCACCCATCCAAGCAGCAGAAGGGGTGGGTTTCCATACACTaGGCTCCACTGGCCCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: LVLEEAEHQIHPSKQQKGWVSIH*APLAPL Trigger: CAGTGGGGCCAGTGGAGCCAAGTGTATGGAAACCCA...CCCCTTCTGCTGCTTGGATGGGTGGATTTGGTGCTCAGCCTCCTCAAGGACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133444.8 |
||
| 3UTR CCA 72 bp | TGTCGGGAAGCTTGCCATTCCATACCCAGCTTGGTTTaGAGGAGGTATTACAGGGGGAGGGGCTTGTCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: CREACHSIPSLV*RRYYRGRGLSL Trigger: CAAGGACAAGCCCCTCCCCCTGTAATACCTCCTCCAAACCAAGCTGGGTATGGAATGGCAAGCTTCCCGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133444.8 |
||
| 3UTR CCA 72 bp | CACTGTGTCGGGAAGCTTGCCATTCCATACCCAGCTTaGTTTGGAGGAGGTATTACAGGGGGAGGGGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: HCVGKLAIPYPA*FGGGITGGGAC Trigger: ACAAGCCCCTCCCCCTGTAATACCTCCTCCAAACCAAGCTGGGTATGGAATGGCAAGCTTCCCGACACAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133444.8 |
||
| 3UTR GCA 72 bp | CGTGTTTCGAGTCCCAGCTCACTGTGTCGGGAAGCTTaGCATTCCATACCCAGCTTGGTTTGGAGGAGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: RVSSPSSLCREA*HSIPSLVWRRY Trigger: ATACCTCCTCCAAACCAAGCTGGGTATGGAATGGCAAGCTTCCCGACACAGTGAGCTGGGACTCGAAACACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133444.8 |
||
| 3UTR GCA 72 bp | CGTGGAGACATCAGTGTTAACACTGCTACTGAGCACTaGACTGGCAGCGAGCATGTTACTTGTCACCTCGAA | + |
|
Preference number: 3 (lower is better) Translates to: RGDISVNTATEH*TGSEHVTCHLE Trigger: TTCGAGGTGACAAGTAACATGCTCGCTGCCAGTGCAGTGCTCAGTAGCAGTGTTAACACTGATGTCTCCACG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 |
||
| 3UTR TCA 72 bp | CAATGGCGTGGGCCGCACTCTCGTGAGTGGAAAATCTaGCAAACGAATAGCCCTTCTCTGGAAAAACTCGTA | + |
|
Preference number: 3 (lower is better) Translates to: QWRGPHSREWKI*QTNSPSLEKLV Trigger: TACGAGTTTTTCCAGAGAAGGGCTATTCGTTTGTCAGATTTTCCACTCACGAGAGTGCGGCCCACGCCATTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133089.8 |
||
| 3UTR CCA 72 bp | GACCACCAACAATCGTTCAAGAACCTTCTACGATGCTaGTCCTTATTCAGGCTGCACGCTTTCAGTCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: DHQQSFKNLLRC*SLFRLHAFSLA Trigger: AGCCAGACTGAAAGCGTGCAGCCTGAATAAGGACCAGCATCGTAGAAGGTTCTTGAACGATTGTTGGTGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| 3UTR GCA 72 bp | ATGGACCACCAACAATCGTTCAAGAACCTTCTACGATaGTGGTCCTTATTCAGGCTGCACGCTTTCAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: MDHQQSFKNLLR*WSLFRLHAFSL Trigger: CAGACTGAAAGCGTGCAGCCTGAATAAGGACCAGCATCGTAGAAGGTTCTTGAACGATTGTTGGTGGTCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| 3UTR CCA 72 bp | CCTCTCACTGGCGGCAAACATAAAGATCAGACGGACTaGCACCGAGGAAATGCTAGTAGAAAAGGATTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: PLTGGKHKDQTD*HRGNASRKGFK Trigger: CTTGAATCCTTTTCTACTAGCATTTCCTCGGTGCCAGTCCGTCTGATCTTTATGTTTGCCGCCAGTGAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106226.9 |
||
| 3UTR CCA 72 bp | TTGTTGGTTCCACGGCTGCCCATATACTCCATAGGGTaGTACTTGCCACCCATTTGCCATATACTGTCCATA | + |
|
Preference number: 3 (lower is better) Translates to: LLVPRLPIYSIG*YLPPICHILSI Trigger: TATGGACAGTATATGGCAAATGGGTGGCAAGTACCACCCTATGGAGTATATGGGCAGCCGTGGAACCAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123666.8 ENSMUST00000133089.8 ENSMUST00000133444.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTGAATTACAATCGTGTTTCGAGTCCCAGCTCACTGTGTCGGGAAGCTTGCATACTGTCCATACTGTaGTGGGTTTCCATACACTTG | + |
|
Preference number: 3 (lower is better) Translates to: VVNYNRVSSPSSLCREACILSIL*WVSIHL Trigger: CAAGTGTATGGAAACCCACAACAGTATGGACAGTAT...GCAAGCTTCCCGACACAGTGAGCTGGGACTCGAAACACGATTGTAATTCACCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133444.8 |
||
| 3UTR TCA 72 bp | AGGGACGGGAGGGGAGTATCAGGATTCAGGACGAACTaGTGTGATTCTCAGTTTTTCACGATACTCCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: RDGRGVSGFRTN*CDSQFFTILPF Trigger: AAAAGGGAGTATCGTGAAAAACTGAGAATCACATCAGTTCGTCCTGAATCCTGATACTCCCCTCCCGTCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| 3UTR TCA 72 bp | GTCATTTGTGTCCTTCTCCTTTTACATGGCCAACCGTaGAGACGTGGAGACATCAGTGTTAACACTGCTACT | + |
|
Preference number: 3 (lower is better) Translates to: VICVLLLLHGQP*RRGDISVNTAT Trigger: AGTAGCAGTGTTAACACTGATGTCTCCACGTCTTCACGGTTGGCCATGTAAAAGGAGAAGGACACAAATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 |
||
| 3UTR GCA 72 bp | CCCATATACTCCATAGGGTGGTACTTGCCACCCATTTaGCATATACTGTCCATACTGTTGTGGGTTTCCATA | + |
|
Preference number: 3 (lower is better) Translates to: PIYSIGWYLPPI*HILSILLWVSI Trigger: TATGGAAACCCACAACAGTATGGACAGTATATGGCAAATGGGTGGCAAGTACCACCCTATGGAGTATATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123666.8 ENSMUST00000133089.8 ENSMUST00000133444.8 |
||
| 3UTR CCA 72 bp | CTTACTTCAACTGTGGTTTACAGCTTTGGCTTTAGTTaGCCTCTCACTGGCGGCAAACATAAAGATCAGACG | + |
|
Preference number: 3 (lower is better) Translates to: LTSTVVYSFGFS*PLTGGKHKDQT Trigger: CGTCTGATCTTTATGTTTGCCGCCAGTGAGAGGCCAACTAAAGCCAAAGCTGTAAACCACAGTTGAAGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106226.9 |
||
| 3UTR CCA 72 bp | ACAGGAAAGAAAAGGCAACAGTTCTTAGGCTTAAAGTaGACGGAGGGCACAAACTCAAATCTGCATTGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: TGKKRQQFLGLK*TEGTNSNLHCK Trigger: CTTACAATGCAGATTTGAGTTTGTGCCCTCCGTCCACTTTAAGCCTAAGAACTGTTGCCTTTTCTTTCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106226.9 |
||
| 3UTR CCA 72 bp | GAGGGCACAAACTCAAATCTGCATTGTAAGACAGTCTaGACCTGTGTTAGCTTGATCATCTCATTTCCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: EGTNSNLHCKTV*TCVSLIISFPK Trigger: TTTAGGAAATGAGATGATCAAGCTAACACAGGTCCAGACTGTCTTACAATGCAGATTTGAGTTTGTGCCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106226.9 |
||
| 3UTR CCA 72 bp | TCTTTATTTTTCTTGGTCAATTCTCTATCATCATTTTaGAGTTTGGGCAGAACTGAGTTCCAGTGTGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: SLFFLVNSLSSF*SLGRTEFQCAQ Trigger: CTGTGCACACTGGAACTCAGTTCTGCCCAAACTCCAAAATGATGATAGAGAATTGACCAAGAAAAATAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000205278.2 |
||
| CDS-3UTR CCA 90 bp | CACACTTTCTCCTGCTGCCTTCTATGTGGTCCGCCTCAGGGACGGGAGGGGAGTATACCCAGCTTGGTTTaGAGGAGGTATTACAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HTFSCCLLCGPPQGREGSIPSLV*RRYYRG Trigger: CCCCCTGTAATACCTCCTCCAAACCAAGCTGGGTAT...ACTCCCCTCCCGTCCCTGAGGCGGACCACATAGAAGGCAGCAGGAGAAAGTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| 3UTR CAA 72 bp | GTTTGGAGGAGGTATTACAGGGGGAGGGGCTTGTCCTaGAGGAGGCTGAGCACCAAATCCACCCATCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VWRRYYRGRGLS*RRLSTKSTHPS Trigger: GCTTGGATGGGTGGATTTGGTGCTCAGCCTCCTCAAGGACAAGCCCCTCCCCCTGTAATACCTCCTCCAAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133444.8 |
||
| CDS-3UTR TCA 90 bp | CACACTTTCTCCTGCTGCCTTCTATGTGGTCCGCCTCAGGGACGGGAGGGGAGTGCAGCAGAAGGGGATTaGTCTACTCCAAATCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HTFSCCLLCGPPQGREGSAAEGD*STPNPC Trigger: ACAAGGATTTGGAGTAGATCAATCCCCTTCTGCTGC...ACTCCCCTCCCGTCCCTGAGGCGGACCACATAGAAGGCAGCAGGAGAAAGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| 3UTR CAA 72 bp | GTGTCGGGAAGCTTGCCATTCCATACCCAGCTTGGTTaGGAGGAGGTATTACAGGGGGAGGGGCTTGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSGSLPFHTQLG*EEVLQGEGLVL Trigger: AAGGACAAGCCCCTCCCCCTGTAATACCTCCTCCAAACCAAGCTGGGTATGGAATGGCAAGCTTCCCGACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133444.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCTTCTATGTGGTCCGCCTCAGGGACGGGAGGGGAGTATCAGGATTCAGGAGTTTGTCTCATAAGTTaGTCTGTCAGCCCCGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPSMWSASGTGGEYQDSGVCLIS*SVSPEA Trigger: TGCTTCGGGGCTGACAGATCAACTTATGAGACAAAC...TCCTGAATCCTGATACTCCCCTCCCGTCCCTGAGGCGGACCACATAGAAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | CACACTTTCTCCTGCTGCCTTCTATGTGGTCCGCCTCAGGGACGGGAGGGGAGTCTGTCCATACTGTTGTaGGTTTCCATACACTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HTFSCCLLCGPPQGREGSLSILL*VSIHLA Trigger: AGCCAAGTGTATGGAAACCCACAACAGTATGGACAG...ACTCCCCTCCCGTCCCTGAGGCGGACCACATAGAAGGCAGCAGGAGAAAGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | CTATGTGGTCCGCCTCAGGGACGGGAGGGGAGTATCAGGATTCAGGACGAACTGACTCCAAATCCTTGTTaGTTCCACGGCTGCCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: LCGPPQGREGSIRIQDELTPNPC*FHGCPY Trigger: ATATGGGCAGCCGTGGAACCAACAAGGATTTGGAGT...CAGTTCGTCCTGAATCCTGATACTCCCCTCCCGTCCCTGAGGCGGACCACATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| 3UTR CAA 72 bp | TCGTGTTTCGAGTCCCAGCTCACTGTGTCGGGAAGCTaGCCATTCCATACCCAGCTTGGTTTGGAGGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SCFESQLTVSGS*PFHTQLGLEEV Trigger: TACCTCCTCCAAACCAAGCTGGGTATGGAATGGCAAGCTTCCCGACACAGTGAGCTGGGACTCGAAACACGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133444.8 |
||
| CDS-3UTR CCA 90 bp | TGGTCCGCCTCAGGGACGGGAGGGGAGTATCAGGATTCAGGACGAACTGATGTGCTGTCCATACTGTTGTaGGTTTCCATACACTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WSASGTGGEYQDSGRTDVLSILL*VSIHLA Trigger: AGCCAAGTGTATGGAAACCCACAACAGTATGGACAG...CACATCAGTTCGTCCTGAATCCTGATACTCCCCTCCCGTCCCTGAGGCGGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCTTCTATGTGGTCCGCCTCAGGGACGGGAGGGGAGTATCAGGATTCAGGACTGTCCATACTGTTGTaGGTTTCCATACACTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPSMWSASGTGGEYQDSGLSILL*VSIHLA Trigger: AGCCAAGTGTATGGAAACCCACAACAGTATGGACAG...TCCTGAATCCTGATACTCCCCTCCCGTCCCTGAGGCGGACCACATAGAAGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | TCCTGCTGCCTTCTATGTGGTCCGCCTCAGGGACGGGAGGGGAGTATCAGGATTATATACTCCATAGGGTaGTACTTGCCACCCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SCCLLCGPPQGREGSIRIIYSIG*YLPPIC Trigger: GCAAATGGGTGGCAAGTACCACCCTATGGAGTATAT...AATCCTGATACTCCCCTCCCGTCCCTGAGGCGGACCACATAGAAGGCAGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR TCA 90 bp | CACACTTTCTCCTGCTGCCTTCTATGTGGTCCGCCTCAGGGACGGGAGGGGAGTTTGCCCAGTTTACTTTaGCCTCCTTTCCCAAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: HTFSCCLLCGPPQGREGSLPSLL*PPFPKF Trigger: AAATTTTGGGAAAGGAGGTCAAAGTAAACTGGGCAA...ACTCCCCTCCCGTCCCTGAGGCGGACCACATAGAAGGCAGCAGGAGAAAGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR GCA 90 bp | TGGTCCGCCTCAGGGACGGGAGGGGAGTATCAGGATTCAGGACGAACTGATGTGTTTGGACTTTCCAGTTaGCATGTCTTTAACTACCCG | + |
|
Preference number: 4 (lower is better) Translates to: WSASGTGGEYQDSGRTDVFGLSS*HVFNYP Trigger: CGGGTAGTTAAAGACATGGCAACTGGAAAGTCCAAA...CACATCAGTTCGTCCTGAATCCTGATACTCCCCTCCCGTCCCTGAGGCGGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCTTCTATGTGGTCCGCCTCAGGGACGGGAGGGGAGTATCAGGATTCAGGATTTGGACTTTCCAGTTaGCATGTCTTTAACTACCCG | + |
|
Preference number: 4 (lower is better) Translates to: LPSMWSASGTGGEYQDSGFGLSS*HVFNYP Trigger: CGGGTAGTTAAAGACATGGCAACTGGAAAGTCCAAA...TCCTGAATCCTGATACTCCCCTCCCGTCCCTGAGGCGGACCACATAGAAGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR GCA 90 bp | TGGTCCGCCTCAGGGACGGGAGGGGAGTATCAGGATTCAGGACGAACTGATGTGCCCCATATGCACAATTaGATTCTCTGCATCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: WSASGTGGEYQDSGRTDVPHMHN*ILCIQF Trigger: AAACTGGATGCAGAGAATGCAATTGTGCATATGGGG...CACATCAGTTCGTCCTGAATCCTGATACTCCCCTCCCGTCCCTGAGGCGGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | TCTGAAATCACACTTTCTCCTGCTGCCTTCTATGTGGTCCGCCTCAGGGACGGGACTCCAAATCCTTGTTaGTTCCACGGCTGCCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: SEITLSPAAFYVVRLRDGTPNPC*FHGCPY Trigger: ATATGGGCAGCCGTGGAACCAACAAGGATTTGGAGT...CCCGTCCCTGAGGCGGACCACATAGAAGGCAGCAGGAGAAAGTGTGATTTCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR TCA 90 bp | GGGACGGGAGGGGAGTATCAGGATTCAGGACGAACTGATGTGATTCTCAGTTTTTGGCCCAATTGGTTCTaGTTTGTCGACCTCCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: GTGGEYQDSGRTDVILSFWPNWF*FVDLPT Trigger: GGTTGGGAGGTCGACAAATCAGAACCAATTGGGCCA...AAAACTGAGAATCACATCAGTTCGTCCTGAATCCTGATACTCCCCTCCCGTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR TCA 90 bp | CAATCGTGTTTCGAGTCCCAGCTCACTGTGTCGGGAAGCTTGCCATTCCATACCGTTTGTCTCATAAGTTaGTCTGTCAGCCCCGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSCFESQLTVSGSLPFHTVCLIS*SVSPEA Trigger: TGCTTCGGGGCTGACAGATCAACTTATGAGACAAAC...GGTATGGAATGGCAAGCTTCCCGACACAGTGAGCTGGGACTCGAAACACGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133444.8 |
||
| CDS-3UTR GCA 90 bp | GGTTCCACGGCTGCCCATATACTCCATAGGGTGGTACTTGCCACCCATTTGCCAGCTACTTGGTGTTGTTaGCCAGTTTACTTTGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSTAAHILHRVVLATHLPATWCC*PVYFDL Trigger: GAGGTCAAAGTAAACTGGGCAACAACACCAAGTAGC...TGGCAAATGGGTGGCAAGTACCACCCTATGGAGTATATGGGCAGCCGTGGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123666.8 |
||
| CDS-3UTR CCA 90 bp | TGGTCCGCCTCAGGGACGGGAGGGGAGTATCAGGATTCAGGACGAACTGATGTGTTCCACAAAGCAATATaGGTCATTGCTTGTATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WSASGTGGEYQDSGRTDVFHKAI*VIACML Trigger: GAGCATACAAGCAATGACCCATATTGCTTTGTGGAA...CACATCAGTTCGTCCTGAATCCTGATACTCCCCTCCCGTCCCTGAGGCGGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGTGACAGGAGACTGCAGCCTGTGGTGAATTACAATCGTGTTTCGAGTCCCATACCCAGCTTGGTTTaGAGGAGGTATTACAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ECDRRLQPVVNYNRVSSPIPSLV*RRYYRG Trigger: CCCCCTGTAATACCTCCTCCAAACCAAGCTGGGTAT...GGGACTCGAAACACGATTGTAATTCACCACAGGCTGCAGTCTCCTGTCACACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCTTCTATGTGGTCCGCCTCAGGGACGGGAGGGGAGTATCAGGATTCAGGATTCCACAAAGCAATATaGGTCATTGCTTGTATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPSMWSASGTGGEYQDSGFHKAI*VIACML Trigger: CAGCATACAAGCAATGACCCATATTGCTTTGTGGAA...TCCTGAATCCTGATACTCCCCTCCCGTCCCTGAGGCGGACCACATAGAAGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106226.9 |
||
| CDS-3UTR TCA 90 bp | GGCTTAAAGTGGACGGAGGGCACAAACTCAAATCTGCATTGTAAGACAGTCTGGTGGCCCAATTGGTTCTaGTTTGTCGACCTCCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: GLKWTEGTNSNLHCKTVWWPNWF*FVDLPT Trigger: GGTTGGGAGGTCGACAAATCAGAACCAATTGGGCCA...CCAGACTGTCTTACAATGCAGATTTGAGTTTGTGCCCTCCGTCCACTTTAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106226.9 |
||
| CDS-3UTR TCA 90 bp | TGTGACAGGAGACTGCAGCCTGTGGTGAATTACAATCGTGTTTCGAGTCCCAGCGCAGCAGAAGGGGATTaGTCTACTCCAAATCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CDRRLQPVVNYNRVSSPSAAEGD*STPNPC Trigger: ACAAGGATTTGGAGTAGATCAATCCCCTTCTGCTGC...GCTGGGACTCGAAACACGATTGTAATTCACCACAGGCTGCAGTCTCCTGTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR GCA 90 bp | TCCTGCTGCCTTCTATGTGGTCCGCCTCAGGGACGGGAGGGGAGTATCAGGATTGGGTCATTGCTTGTATaGTCTGTTATCATTTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: SCCLLCGPPQGREGSIRIGSLLV*SVIILQ Trigger: CTGTAAAATGATAACAGAGCATACAAGCAATGACCC...AATCCTGATACTCCCCTCCCGTCCCTGAGGCGGACCACATAGAAGGCAGCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165023.8 |
||
| CDS-3UTR GCA 90 bp | TCTGAAATCACACTTTCTCCTGCTGCCTTCTATGTGGTCCGCCTCAGGGACGGGTACTTGCCACCCATTTaGCATATACTGTCCATACTG | + |
|
Preference number: 4 (lower is better) Translates to: SEITLSPAAFYVVRLRDGYLPPI*HILSIL Trigger: CAGTATGGACAGTATATGGCAAATGGGTGGCAAGTA...CCCGTCCCTGAGGCGGACCACATAGAAGGCAGCAGGAGAAAGTGTGATTTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGTGACAGGAGACTGCAGCCTGTGGTGAATTACAATCGTGTTTCGAGTCCCACTTTTAGGGGCAGGTaGTTTACGTGTGGCCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: ECDRRLQPVVNYNRVSSPTFRGR*FTCGPI Trigger: AATTGGGCCACACGTAAACCACCTGCCCCTAAAAGT...GGGACTCGAAACACGATTGTAATTCACCACAGGCTGCAGTCTCCTGTCACACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| 3UTR CAA 72 bp | TACTTGCCACCCATTTGCCATATACTGTCCATACTGTaGTGGGTTTCCATACACTTGGCTCCACTGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YLPPICHILSIL*WVSIHLAPLAP Trigger: TGGGGCCAGTGGAGCCAAGTGTATGGAAACCCACAACAGTATGGACAGTATATGGCAAATGGGTGGCAAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123666.8 ENSMUST00000133089.8 ENSMUST00000133444.8 |
||
| 3UTR CAA 72 bp | GTTCCACGGCTGCCCATATACTCCATAGGGTGGTACTaGCCACCCATTTGCCATATACTGTCCATACTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VPRLPIYSIGWY*PPICHILSILL Trigger: CAACAGTATGGACAGTATATGGCAAATGGGTGGCAAGTACCACCCTATGGAGTATATGGGCAGCCGTGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123666.8 ENSMUST00000133089.8 ENSMUST00000133444.8 |
||
| CDS-3UTR TCA 90 bp | GCAGAACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCATGGCCCAATTGGTTCTaGTTTGTCGACCTCCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: AELEDMCPSPSKAVLKVPWPNWF*FVDLPT Trigger: GGTTGGGAGGTCGACAAATCAGAACCAATTGGGCCA...TGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGTTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR TCA 90 bp | TGTGACAGGAGACTGCAGCCTGTGGTGAATTACAATCGTGTTTCGAGTCCCAGCCGTGAGTGGAAAATCTaGCAAACGAATAGCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CDRRLQPVVNYNRVSSPSREWKI*QTNSPS Trigger: AGAAGGGCTATTCGTTTGTCAGATTTTCCACTCACG...GCTGGGACTCGAAACACGATTGTAATTCACCACAGGCTGCAGTCTCCTGTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000133444.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR GCA 90 bp | GAGTGTGACAGGAGACTGCAGCCTGTGGTGAATTACAATCGTGTTTCGAGTCCCGCTACTTGGTGTTGTTaGCCAGTTTACTTTGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: ECDRRLQPVVNYNRVSSPATWCC*PVYFDL Trigger: GAGGTCAAAGTAAACTGGGCAACAACACCAAGTAGC...GGGACTCGAAACACGATTGTAATTCACCACAGGCTGCAGTCTCCTGTCACACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000123666.8 ENSMUST00000165023.8 |
||
| CDS-3UTR GCA 90 bp | TGGTCCGCCTCAGGGACGGGAGGGGAGTATCAGGATTCAGGACGAACTGATGTGTCATTGCTTGTATGCTaGAAAACAGAAAATCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: WSASGTGGEYQDSGRTDVSLLVC*KTENPT Trigger: TGTTGGATTTTCTGTTTTGCAGCATACAAGCAATGA...CACATCAGTTCGTCCTGAATCCTGATACTCCCCTCCCGTCCCTGAGGCGGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106226.9 |
||
| CDS-3UTR TCA 90 bp | GGGACGGGAGGGGAGTATCAGGATTCAGGACGAACTGATGTGATTCTCAGTTTTCGTGAGTGGAAAATCTaGCAAACGAATAGCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTGGEYQDSGRTDVILSFREWKI*QTNSPS Trigger: AGAAGGGCTATTCGTTTGTCAGATTTTCCACTCACG...AAAACTGAGAATCACATCAGTTCGTCCTGAATCCTGATACTCCCCTCCCGTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGAACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCGCAGCAGAAGGGGATTaGTCTACTCCAAATCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GRTRRHVSFTKQSCAKGSAAEGD*STPNPC Trigger: ACAAGGATTTGGAGTAGATCAATCCCCTTCTGCTGC...GGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGTTCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR GCA 90 bp | GGGACGGGAGGGGAGTATCAGGATTCAGGACGAACTGATGTGATTCTCAGTTTTGCTACTTGGTGTTGTTaGCCAGTTTACTTTGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: GTGGEYQDSGRTDVILSFATWCC*PVYFDL Trigger: GAGGTCAAAGTAAACTGGGCAACAACACCAAGTAGC...AAAACTGAGAATCACATCAGTTCGTCCTGAATCCTGATACTCCCCTCCCGTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR GCA 90 bp | GAGTGTGACAGGAGACTGCAGCCTGTGGTGAATTACAATCGTGTTTCGAGTCCCTTTGGACTTTCCAGTTaGCATGTCTTTAACTACCCG | + |
|
Preference number: 4 (lower is better) Translates to: ECDRRLQPVVNYNRVSSPFGLSS*HVFNYP Trigger: CGGGTAGTTAAAGACATGGCAACTGGAAAGTCCAAA...GGGACTCGAAACACGATTGTAATTCACCACAGGCTGCAGTCTCCTGTCACACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | CAATCGTGTTTCGAGTCCCAGCTCACTGTGTCGGGAAGCTTGCCATTCCATACCTTCCACAAAGCAATATaGGTCATTGCTTGTATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QSCFESQLTVSGSLPFHTFHKAI*VIACML Trigger: GAGCATACAAGCAATGACCCATATTGCTTTGTGGAA...GGTATGGAATGGCAAGCTTCCCGACACAGTGAGCTGGGACTCGAAACACGATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123666.8 |
||
| CDS-3UTR CCA 90 bp | CAATCGTGTTTCGAGTCCCAGCTCACTGTGTCGGGAAGCTTGCCATTCCATACCCGAATAGCCCTTCTCTaGAAAAACTCGTATTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QSCFESQLTVSGSLPFHTRIALL*KNSYFH Trigger: ATGGAAATACGAGTTTTTCCAGAGAAGGGCTATTCG...GGTATGGAATGGCAAGCTTCCCGACACAGTGAGCTGGGACTCGAAACACGATTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133444.8 |
||
| CDS-3UTR CCA 90 bp | GAGTGTGACAGGAGACTGCAGCCTGTGGTGAATTACAATCGTGTTTCGAGTCCCATTCCATACCCAGCTTaGTTTGGAGGAGGTATTACA | + |
|
Preference number: 4 (lower is better) Translates to: ECDRRLQPVVNYNRVSSPIPYPA*FGGGIT Trigger: TGTAATACCTCCTCCAAACCAAGCTGGGTATGGAAT...GGGACTCGAAACACGATTGTAATTCACCACAGGCTGCAGTCTCCTGTCACACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR TCA 90 bp | TGTGACAGGAGACTGCAGCCTGTGGTGAATTACAATCGTGTTTCGAGTCCCAGCAAAGGGGGCAAATGCTaGTTTGATATCTTCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CDRRLQPVVNYNRVSSPSKGGKC*FDIFCC Trigger: ACAACAGAAGATATCAAATCAGCATTTGCCCCCTTT...GCTGGGACTCGAAACACGATTGTAATTCACCACAGGCTGCAGTCTCCTGTCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000123666.8 ENSMUST00000165023.8 |
||
| CDS-3UTR TCA 90 bp | GAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCATGGCCCAATTGGTTCTaGTTTGTCGACCTCCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: EDMCPSPSKAVLKVPNISWPNWF*FVDLPT Trigger: GGTTGGGAGGTCGACAAATCAGAACCAATTGGGCCA...TGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGAACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCGCTACTTGGTGTTGTTaGCCAGTTTACTTTGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRTRRHVSFTKQSCAKGSATWCC*PVYFDL Trigger: GAGGTCAAAGTAAACTGGGCAACAACACCAAGTAGC...GGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGTTCTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000123666.8 ENSMUST00000165023.8 |
||
| CDS-3UTR GCA 90 bp | GAGTGTGACAGGAGACTGCAGCCTGTGGTGAATTACAATCGTGTTTCGAGTCCCAGCAATATGGGTCATTaGTTGTATGCTGCAAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: ECDRRLQPVVNYNRVSSPSNMGH*LYAAKQ Trigger: CTGTTTTGCAGCATACAAGCAATGACCCATATTGCT...GGGACTCGAAACACGATTGTAATTCACCACAGGCTGCAGTCTCCTGTCACACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106226.9 |
||
| CDS-3UTR CCA 90 bp | GGCAGAACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCATATACTCCATAGGGTaGTACTTGCCACCCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GRTRRHVSFTKQSCAKGSIYSIG*YLPPIC Trigger: GCAAATGGGTGGCAAGTACCACCCTATGGAGTATAT...GGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGTTCTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| 3UTR CAA 72 bp | GCCCATATACTCCATAGGGTGGTACTTGCCACCCATTaGCCATATACTGTCCATACTGTTGTGGGTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AHILHRVVLATH*PYTVHTVVGFH Trigger: ATGGAAACCCACAACAGTATGGACAGTATATGGCAAATGGGTGGCAAGTACCACCCTATGGAGTATATGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123666.8 ENSMUST00000133089.8 ENSMUST00000133444.8 |
||
| CDS-3UTR TCA 90 bp | AGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTGGCCCAATTGGTTCTaGTTTGTCGACCTCCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: RHVSFTKQSCAKGSKHFNWPNWF*FVDLPT Trigger: GGTTGGGAGGTCGACAAATCAGAACCAATTGGGCCA...ATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR TCA 90 bp | ATAGGGTGGTACTTGCCACCCATTTGCCATATACTGTCCATACTGTTGTGGGTTCGTGAGTGGAAAATCTaGCAAACGAATAGCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IGWYLPPICHILSILLWVREWKI*QTNSPS Trigger: AGAAGGGCTATTCGTTTGTCAGATTTTCCACTCACG...AACCCACAACAGTATGGACAGTATATGGCAAATGGGTGGCAAGTACCACCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133444.8 |
||
| CDS-3UTR GCA 90 bp | GTTAGTTTCTTGTGTACTTTTAGGGGCAGGTGGTTTACGTGTGGCCCAATTGGTGCTACTTGGTGTTGTTaGCCAGTTTACTTTGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSFLCTFRGRWFTCGPIGATWCC*PVYFDL Trigger: GAGGTCAAAGTAAACTGGGCAACAACACCAAGTAGC...ACCAATTGGGCCACACGTAAACCACCTGCCCCTAAAAGTACACAAGAAACTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000205278.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGAACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCCCCCATATGCACAATTaGATTCTCTGCATCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GRTRRHVSFTKQSCAKGSPHMHN*ILCIQF Trigger: AAACTGGATGCAGAGAATGCAATTGTGCATATGGGG...GGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGTTCTGCC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | GGGACGGGAGGGGAGTATCAGGATTCAGGACGAACTGATGTGATTCTCAGTTTTTTCCACAAAGCAATATaGGTCATTGCTTGTATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GTGGEYQDSGRTDVILSFFHKAI*VIACML Trigger: GAGCATACAAGCAATGACCCATATTGCTTTGTGGAA...AAAACTGAGAATCACATCAGTTCGTCCTGAATCCTGATACTCCCCTCCCGTCCC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | CTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTATACCCAGCTTGGTTTaGAGGAGGTATTACAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LEDMCPSPSKAVLKVPNIIPSLV*RRYYRG Trigger: CCCCCTGTAATACCTCCTCCAAACCAAGCTGGGTAT...AATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 ENSMUST00000205835.2 |
||
| CDS-3UTR TCA 90 bp | ACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATGTTTGTCTCATAAGTTaGTCTGTCAGCCCCGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TRRHVSFTKQSCAKGSKHVCLIS*SVSPEA Trigger: TGCTTCGGGGCTGACAGATCAACTTATGAGACAAAC...ATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000133444.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR TCA 90 bp | GAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAGTTTGTCTCATAAGTTaGTCTGTCAGCCCCGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EDMCPSPSKAVLKVPNISVCLIS*SVSPEA Trigger: TGCTTCGGGGCTGACAGATCAACTTATGAGACAAAC...TGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000133444.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR TCA 90 bp | GAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAGCAGCAGAAGGGGATTaGTCTACTCCAAATCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EDMCPSPSKAVLKVPNISAAEGD*STPNPC Trigger: ACAAGGATTTGGAGTAGATCAATCCCCTTCTGCTGC...TGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR TCA 90 bp | ACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATATCCAACAGAAGAGTTaGCCCTTCTGCTATCGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TRRHVSFTKQSCAKGSKHIQQKS*PFCYRV Trigger: AACCCGATAGCAGAAGGGTCAACTCTTCTGTTGGAT...ATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106226.9 |
||
| CDS-3UTR TCA 90 bp | GTCAATTCTCTATCATCATTTTGGAGTTTGGGCAGAACTGAGTTCCAGTGTGCAATCCAACAGAAGAGTTaGCCCTTCTGCTATCGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VNSLSSFWSLGRTEFQCAIQQKS*PFCYRV Trigger: AACCCGATAGCAGAAGGGTCAACTCTTCTGTTGGAT...TGCACACTGGAACTCAGTTCTGCCCAAACTCCAAAATGATGATAGAGAATTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205278.2 |
||
| CDS-3UTR TCA 90 bp | CATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTTTCATGTCTTCAGAGTGTaGCAGGAGACTGCAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HVSFTKQSCAKGSKHFNFHVFRV*QETAAC Trigger: ACAGGCTGCAGTCTCCTGTCACACTCTGAAGACATG...AAAATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205835.2 |
||
| CDS-3UTR GCA 90 bp | AGCACTGCACTGGCAGCGAGCATGTTACTTGTCACCTCGAATAATTACATTGCTTACTTGCCACCCATTTaGCATATACTGTCCATACTG | + |
|
Preference number: 4 (lower is better) Translates to: STALAASMLLVTSNNYIAYLPPI*HILSIL Trigger: CAGTATGGACAGTATATGGCAAATGGGTGGCAAGTA...AGCAATGTAATTATTCGAGGTGACAAGTAACATGCTCGCTGCCAGTGCAGTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 |
||
| CDS-3UTR CCA 90 bp | ACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATACTCCAAATCCTTGTTaGTTCCACGGCTGCCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: TRRHVSFTKQSCAKGSKHTPNPC*FHGCPY Trigger: ATATGGGCAGCCGTGGAACCAACAAGGATTTGGAGT...ATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | GACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTATACCCAGCTTGGTTTaGAGGAGGTATTACAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DMCPSPSKAVLKVPNISIIPSLV*RRYYRG Trigger: CCCCCTGTAATACCTCCTCCAAACCAAGCTGGGTAT...AATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 ENSMUST00000205835.2 |
||
| CDS-3UTR TCA 90 bp | AGCACTGCACTGGCAGCGAGCATGTTACTTGTCACCTCGAATAATTACATTGCTTTGCCCAGTTTACTTTaGCCTCCTTTCCCAAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: STALAASMLLVTSNNYIALPSLL*PPFPKF Trigger: AAATTTTGGGAAAGGAGGTCAAAGTAAACTGGGCAA...AGCAATGTAATTATTCGAGGTGACAAGTAACATGCTCGCTGCCAGTGCAGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 |
||
| CDS-3UTR TCA 90 bp | TACTCCATAGGGTGGTACTTGCCACCCATTTGCCATATACTGTCCATACTGTTGTTGCCCAGTTTACTTTaGCCTCCTTTCCCAAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: YSIGWYLPPICHILSILLLPSLL*PPFPKF Trigger: AAATTTTGGGAAAGGAGGTCAAAGTAAACTGGGCAA...CAACAGTATGGACAGTATATGGCAAATGGGTGGCAAGTACCACCCTATGGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123666.8 |
||
| CDS-3UTR TCA 90 bp | GAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCACGTGAGTGGAAAATCTaGCAAACGAATAGCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EDMCPSPSKAVLKVPNISREWKI*QTNSPS Trigger: AGAAGGGCTATTCGTTTGTCAGATTTTCCACTCACG...TGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000133444.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR GCA 90 bp | GGTGGTACTTGCCACCCATTTGCCATATACTGTCCATACTGTTGTGGGTTTCCAGGGTCATTGCTTGTATaGTCTGTTATCATTTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: GGTCHPFAIYCPYCCGFPGSLLV*SVIILQ Trigger: CTGTAAAATGATAACAGAGCATACAAGCAATGACCC...TGGAAACCCACAACAGTATGGACAGTATATGGCAAATGGGTGGCAAGTACCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123666.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGAACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAGCAATATGGGTCATTaGTTGTATGCTCTGTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: GRTRRHVSFTKQSCAKGSSNMGH*LYALLS Trigger: TGATAACAGAGCATACAAGCAATGACCCATATTGCT...GGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGTTCTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033135.9 ENSMUST00000106228.8 ENSMUST00000123666.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | GACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTACTCCAAATCCTTGTTaGTTCCACGGCTGCCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: DMCPSPSKAVLKVPNISITPNPC*FHGCPY Trigger: ATATGGGCAGCCGTGGAACCAACAAGGATTTGGAGT...AATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | CATACACTTGGCTCCACTGGCCCCACTGACTGTAGTCAACCTGTTGGAAGTTTTTCTCTATCATCATTTTaGAGTTTGGGCAGGATATTT | + |
|
Preference number: 4 (lower is better) Translates to: HTLGSTGPTDCSQPVGSFSLSSF*SLGRIF Trigger: AAATATCCTGCCCAAACTCCAAAATGATGATAGAGA...AAAACTTCCAACAGGTTGACTACAGTCAGTGGGGCCAGTGGAGCCAAGTGTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000133089.8 |
||
| CDS-3UTR TCA 90 bp | CATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTTTGTTTGTCTCATAAGTTaGTCTGTCAGCCCCGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HVSFTKQSCAKGSKHFNFVCLIS*SVSPEA Trigger: TGCTTCGGGGCTGACAGATCAACTTATGAGACAAAC...AAAATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000133444.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR TCA 90 bp | AGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATCGTGAGTGGAAAATCTaGCAAACGAATAGCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RHVSFTKQSCAKGSKHFNREWKI*QTNSPS Trigger: AGAAGGGCTATTCGTTTGTCAGATTTTCCACTCACG...ATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000133444.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR TCA 90 bp | GAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAGCAGCAGAAGGGGATTaGCTCTGTTATCATTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: EDMCPSPSKAVLKVPNISAAEGD*LCYHFT Trigger: TGTAAAATGATAACAGAGTCAATCCCCTTCTGCTGC...TGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205835.2 |
||
| CDS-3UTR GCA 90 bp | GAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCATACTTGCCACCCATTTaGCATATACTGTCCATACTG | + |
|
Preference number: 4 (lower is better) Translates to: EDMCPSPSKAVLKVPNISYLPPI*HILSIL Trigger: CAGTATGGACAGTATATGGCAAATGGGTGGCAAGTA...TGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR GCA 90 bp | TTAGTTTCTTGTGTACTTTTAGGGGCAGGTGGTTTACGTGTGGCCCAATTGGTTAGCAATATGGGTCATTaGTTGTATGCTGCAAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: LVSCVLLGAGGLRVAQLVSNMGH*LYAAKQ Trigger: CTGTTTTGCAGCATACAAGCAATGACCCATATTGCT...AACCAATTGGGCCACACGTAAACCACCTGCCCCTAAAAGTACACAAGAAACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000205278.2 |
||
| CDS-3UTR CCA 90 bp | GACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTCTGTCCATACTGTTGTaGGTTTCCATACACTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DMCPSPSKAVLKVPNISILSILL*VSIHLA Trigger: AGCCAAGTGTATGGAAACCCACAACAGTATGGACAG...AATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | GACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTATATACTCCATAGGGTaGTACTTGCCACCCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: DMCPSPSKAVLKVPNISIIYSIG*YLPPIC Trigger: GCAAATGGGTGGCAAGTACCACCCTATGGAGTATAT...AATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTTTTATACCCAGCTTGGTTTaGAGGAGGTATTACAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MCPSPSKAVLKVPNISIFIPSLV*RRYYRG Trigger: CCCCCTGTAATACCTCCTCCAAACCAAGCTGGGTAT...AAAAATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 ENSMUST00000205835.2 |
||
| CDS-3UTR CCA 90 bp | ACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATATTCCATACCCAGCTTaGTTTGGAGGAGGTATTACA | + |
|
Preference number: 4 (lower is better) Translates to: TRRHVSFTKQSCAKGSKHIPYPA*FGGGIT Trigger: TGTAATACCTCCTCCAAACCAAGCTGGGTATGGAAT...ATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 ENSMUST00000205835.2 |
||
| CDS-3UTR CCA 90 bp | CTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTATTCCATACCCAGCTTaGTTTGGAGGAGGTATTACA | + |
|
Preference number: 4 (lower is better) Translates to: LEDMCPSPSKAVLKVPNIIPYPA*FGGGIT Trigger: TGTAATACCTCCTCCAAACCAAGCTGGGTATGGAAT...AATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 ENSMUST00000205835.2 |
||
| CDS-3UTR CCA 90 bp | GAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTCCATACCCAGCTTaGTTTGGAGGAGGTATTACA | + |
|
Preference number: 4 (lower is better) Translates to: EDMCPSPSKAVLKVPNISIPYPA*FGGGIT Trigger: TGTAATACCTCCTCCAAACCAAGCTGGGTATGGAAT...TGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 ENSMUST00000205835.2 |
||
| 3UTR CAA 72 bp | TTATTGAAAGACTTACTTCAACTGTGGTTTACAGCTTaGGCTTTAGTTGGCCTCTCACTGGCGGCAAACATA | + |
|
Preference number: 4 (lower is better) Translates to: LLKDLLQLWFTA*ALVGLSLAANI Trigger: TATGTTTGCCGCCAGTGAGAGGCCAACTAAAGCCAAAGCTGTAAACCACAGTTGAAGTAAGTCTTTCAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106226.9 |
||
| CDS-3UTR TCA 90 bp | AGAACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAATTGCCCAGTTTACTTTaGCCTCCTTTCCCAAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: RTRRHVSFTKQSCAKGSKLPSLL*PPFPKF Trigger: AAATTTTGGGAAAGGAGGTCAAAGTAAACTGGGCAA...TTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000123666.8 ENSMUST00000165023.8 |
||
| CDS-3UTR TCA 90 bp | GAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAAAAGGGGGCAAATGCTaGTTTGATATCTTCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EDMCPSPSKAVLKVPNISKGGKC*FDIFCC Trigger: ACAACAGAAGATATCAAATCAGCATTTGCCCCCTTT...TGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000123666.8 ENSMUST00000165023.8 |
||
| CDS-3UTR TCA 90 bp | ACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATAAAGGGGGCAAATGCTaGTTTGATATCTTCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TRRHVSFTKQSCAKGSKHKGGKC*FDIFCC Trigger: ACAACAGAAGATATCAAATCAGCATTTGCCCCCTTT...ATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000123666.8 ENSMUST00000165023.8 |
||
| CDS-3UTR TCA 90 bp | GTCAATTCTCTATCATCATTTTGGAGTTTGGGCAGAACTGAGTTCCAGTGTGCAAAAGGGGGCAAATGCTaGTTTGATATCTTCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VNSLSSFWSLGRTEFQCAKGGKC*FDIFCC Trigger: ACAACAGAAGATATCAAATCAGCATTTGCCCCCTTT...TGCACACTGGAACTCAGTTCTGCCCAAACTCCAAAATGATGATAGAGAATTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000205278.2 |
||
| CDS-3UTR GCA 90 bp | AGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTTTGGACTTTCCAGTTaGCATGTCTTTAACTACCCG | + |
|
Preference number: 4 (lower is better) Translates to: RHVSFTKQSCAKGSKHFNFGLSS*HVFNYP Trigger: CGGGTAGTTAAAGACATGGCAACTGGAAAGTCCAAA...ATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR GCA 90 bp | AGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATCCCCATATGCACAATTaGATTCTCTGCATCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: RHVSFTKQSCAKGSKHFNPHMHN*ILCIQF Trigger: AAACTGGATGCAGAGAATGCAATTGTGCATATGGGG...ATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR GCA 90 bp | GACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTCCCCATATGCACAATTaGATTCTCTGCATCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: DMCPSPSKAVLKVPNISIPHMHN*ILCIQF Trigger: AAACTGGATGCAGAGAATGCAATTGTGCATATGGGG...AATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | AGAACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAATTCCACAAAGCAATATaGGTCATTGCTTGTATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RTRRHVSFTKQSCAKGSKFHKAI*VIACML Trigger: GAGCATACAAGCAATGACCCATATTGCTTTGTGGAA...TTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033135.9 ENSMUST00000106228.8 ENSMUST00000123666.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | CTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTCGAATAGCCCTTCTCTaGAAAAACTCGTATTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LEDMCPSPSKAVLKVPNIRIALL*KNSYFH Trigger: ATGGAAATACGAGTTTTTCCAGAGAAGGGCTATTCG...AATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000133444.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | GAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCACGAATAGCCCTTCTCTaGAAAAACTCGTATTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EDMCPSPSKAVLKVPNISRIALL*KNSYFH Trigger: ATGGAAATACGAGTTTTTCCAGAGAAGGGCTATTCG...TGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000133444.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | ACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATCGAATAGCCCTTCTCTaGAAAAACTCGTATTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TRRHVSFTKQSCAKGSKHRIALL*KNSYFH Trigger: ATGGAAATACGAGTTTTTCCAGAGAAGGGCTATTCG...ATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000133444.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | CATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTTTCTGTCCATACTGTTGTaGGTTTCCATACACTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HVSFTKQSCAKGSKHFNFLSILL*VSIHLA Trigger: AGCCAAGTGTATGGAAACCCACAACAGTATGGACAG...AAAATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | CATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTTTATATACTCCATAGGGTaGTACTTGCCACCCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HVSFTKQSCAKGSKHFNFIYSIG*YLPPIC Trigger: GCAAATGGGTGGCAAGTACCACCCTATGGAGTATAT...AAAATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTTTTACTCCAAATCCTTGTTaGTTCCACGGCTGCCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: MCPSPSKAVLKVPNISIFTPNPC*FHGCPY Trigger: ATATGGGCAGCCGTGGAACCAACAAGGATTTGGAGT...AAAAATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | AGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATATTCCATACCCAGCTTaGTTTGGAGGAGGTATTACA | + |
|
Preference number: 4 (lower is better) Translates to: RHVSFTKQSCAKGSKHFNIPYPA*FGGGIT Trigger: TGTAATACCTCCTCCAAACCAAGCTGGGTATGGAAT...ATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 ENSMUST00000205835.2 |
||
| CDS-3UTR CCA 90 bp | GTCAATTCTCTATCATCATTTTGGAGTTTGGGCAGAACTGAGTTCCAGTGTGCATTCCACAAAGCAATATaGGTCATTGCTTGTATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VNSLSSFWSLGRTEFQCAFHKAI*VIACML Trigger: CAGCATACAAGCAATGACCCATATTGCTTTGTGGAA...TGCACACTGGAACTCAGTTCTGCCCAAACTCCAAAATGATGATAGAGAATTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205278.2 |
||
| CDS-3UTR CCA 90 bp | GAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAGGTGGTGACACCTGTTaGAAGTTTTTAGTCATATCA | + |
|
Preference number: 4 (lower is better) Translates to: EDMCPSPSKAVLKVPNISGGDTC*KFLVIS Trigger: TGATATGACTAAAAACTTCCAACAGGTGTCACCACC...TGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133444.8 |
||
| CDS-3UTR TCA 90 bp | AGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTTGCCCAGTTTACTTTaGCCTCCTTTCCCAAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: RHVSFTKQSCAKGSKHFNLPSLL*PPFPKF Trigger: AAATTTTGGGAAAGGAGGTCAAAGTAAACTGGGCAA...ATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000123666.8 ENSMUST00000165023.8 |
||
| CDS-3UTR TCA 90 bp | GACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTAAAGGGGGCAAATGCTaGTTTGATATCTTCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: DMCPSPSKAVLKVPNISIKGGKC*FDIFCC Trigger: ACAACAGAAGATATCAAATCAGCATTTGCCCCCTTT...AATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000123666.8 ENSMUST00000165023.8 |
||
| CDS-3UTR TCA 90 bp | CTTATAGCAACCCTGAAATCACTTCACTGGGTTTTAATCAAGGTATTTATGTACGTTTGTCTCATAAGTTaGTCTGTCAGCCCCGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LIATLKSLHWVLIKVFMYVCLIS*SVSPEA Trigger: TGCTTCGGGGCTGACAGATCAACTTATGAGACAAAC...GTACATAAATACCTTGATTAAAACCCAGTGAAGTGATTTCAGGGTTGCTATAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106226.9 |
||
| CDS-3UTR GCA 90 bp | CTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTGGGTCATTGCTTGTATaGTCTGTTATCATTTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: LEDMCPSPSKAVLKVPNIGSLLV*SVIILQ Trigger: CTGTAAAATGATAACAGAGCATACAAGCAATGACCC...AATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033135.9 ENSMUST00000123666.8 ENSMUST00000165023.8 |
||
| CDS-3UTR GCA 90 bp | CATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTTTCCCCATATGCACAATTaGATTCTCTGCATCCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HVSFTKQSCAKGSKHFNFPHMHN*ILCIQF Trigger: AAACTGGATGCAGAGAATGCAATTGTGCATATGGGG...AAAATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR GCA 90 bp | CATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTTTTACTTGCCACCCATTTaGCATATACTGTCCATACTG | + |
|
Preference number: 4 (lower is better) Translates to: HVSFTKQSCAKGSKHFNFYLPPI*HILSIL Trigger: CAGTATGGACAGTATATGGCAAATGGGTGGCAAGTA...AAAATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR GCA 90 bp | TTAGTTTCTTGTGTACTTTTAGGGGCAGGTGGTTTACGTGTGGCCCAATTGGTTTCATTGCTTGTATGCTaGAAAACAGAAAATCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LVSCVLLGAGGLRVAQLVSLLVC*KTENPT Trigger: TGTTGGATTTTCTGTTTTGCAGCATACAAGCAATGA...AACCAATTGGGCCACACGTAAACCACCTGCCCCTAAAAGTACACAAGAAACTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000205278.2 |
||
| CDS-3UTR CCA 90 bp | GACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTCGAATAGCCCTTCTCTaGAAAAACTCGTATTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DMCPSPSKAVLKVPNISIRIALL*KNSYFH Trigger: ATGGAAATACGAGTTTTTCCAGAGAAGGGCTATTCG...AATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000133444.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | AGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATCGAATAGCCCTTCTCTaGAAAAACTCGTATTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RHVSFTKQSCAKGSKHFNRIALL*KNSYFH Trigger: ATGGAAATACGAGTTTTTCCAGAGAAGGGCTATTCG...ATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000133444.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTTTTATATACTCCATAGGGTaGTACTTGCCACCCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: MCPSPSKAVLKVPNISIFIYSIG*YLPPIC Trigger: GCAAATGGGTGGCAAGTACCACCCTATGGAGTATAT...AAAAATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCCACCCATTTGCCATATACTGTCCATACTGTTGTGGGTTTCCATACACTTCATCATTTTGGAGTTTaGGCAGGATATTTTACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LATHLPYTVHTVVGFHTLHHFGV*AGYFTK Trigger: TTTGGTAAAATATCCTGCCCAAACTCCAAAATGATG...AAGTGTATGGAAACCCACAACAGTATGGACAGTATATGGCAAATGGGTGGCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133089.8 |
||
| 3UTR CAA 72 bp | ACACAGGCCAACAGGTTTAACACACTATCAAAACATTaGCACCTCCTAGTTGTCACAATTGAAACACATAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQANRFNTLSKH*HLLVVTIETHR Trigger: CCTATGTGTTTCAATTGTGACAACTAGGAGGTGCAAATGTTTTGATAGTGTGTTAAACCTGTTGGCCTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106226.9 |
||
| CDS-3UTR TCA 90 bp | CTGACTGTAGTCAACCTGTTGGAAGTTTTTAGTCATATCAGGAGATTCTTTACCAAAGGGGGCAAATGCTaGTTTGATATCTTCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTVVNLLEVFSHIRRFFTKGGKC*FDIFCC Trigger: ACAACAGAAGATATCAAATCAGCATTTGCCCCCTTT...GGTAAAGAATCTCCTGATATGACTAAAAACTTCCAACAGGTTGACTACAGTCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133089.8 |
||
| CDS-3UTR GCA 90 bp | ATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTTTTTACTTGCCACCCATTTaGCATATACTGTCCATACTG | + |
|
Preference number: 4 (lower is better) Translates to: MCPSPSKAVLKVPNISIFYLPPI*HILSIL Trigger: CAGTATGGACAGTATATGGCAAATGGGTGGCAAGTA...AAAAATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACAT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR GCA 90 bp | ATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTTTTAGCAATATGGGTCATTaGTTGTATGCTCTGTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: MCPSPSKAVLKVPNISIFSNMGH*LYALLS Trigger: TGATAACAGAGCATACAAGCAATGACCCATATTGCT...AAAAATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033135.9 ENSMUST00000106228.8 ENSMUST00000123666.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | CACACTTTCTCCTGCTGCCTTCTATGTGGTCCGCCTCAGGGACGGGAGGGGAGTTACAGGGGGAGGGGCTaGTCCTTGAGGAGGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: HTFSCCLLCGPPQGREGSYRGRG*SLRRLS Trigger: GCTCAGCCTCCTCAAGGACAAGCCCCTCCCCCTGTA...ACTCCCCTCCCGTCCCTGAGGCGGACCACATAGAAGGCAGCAGGAGAAAGTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | CTATGTGGTCCGCCTCAGGGACGGGAGGGGAGTATCAGGATTCAGGACGAACTGTACAGGGGGAGGGGCTaGTCCTTGAGGAGGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LCGPPQGREGSIRIQDELYRGRG*SLRRLS Trigger: GCTCAGCCTCCTCAAGGACAAGCCCCTCCCCCTGTA...CAGTTCGTCCTGAATCCTGATACTCCCCTCCCGTCCCTGAGGCGGACCACATAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | CACACTTTCTCCTGCTGCCTTCTATGTGGTCCGCCTCAGGGACGGGAGGGGAGTTACTCCAAATCCTTGTaGGTTCCACGGCTGCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: HTFSCCLLCGPPQGREGSYSKSL*VPRLPI Trigger: TATGGGCAGCCGTGGAACCAACAAGGATTTGGAGTA...ACTCCCCTCCCGTCCCTGAGGCGGACCACATAGAAGGCAGCAGGAGAAAGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | GAGTGTGACAGGAGACTGCAGCCTGTGGTGAATTACAATCGTGTTTCGAGTCCCTACAGGGGGAGGGGCTaGTCCTTGAGGAGGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ECDRRLQPVVNYNRVSSPYRGRG*SLRRLS Trigger: GCTCAGCCTCCTCAAGGACAAGCCCCTCCCCCTGTA...GGGACTCGAAACACGATTGTAATTCACCACAGGCTGCAGTCTCCTGTCACACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCTTCTATGTGGTCCGCCTCAGGGACGGGAGGGGAGTATCAGGATTCAGGACATACCCAGCTTGGTTaGGAGGAGGTATTACAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPSMWSASGTGGEYQDSGHTQLG*EEVLQG Trigger: CCCCTGTAATACCTCCTCCAAACCAAGCTGGGTATG...TCCTGAATCCTGATACTCCCCTCCCGTCCCTGAGGCGGACCACATAGAAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCTTCTATGTGGTCCGCCTCAGGGACGGGAGGGGAGTATCAGGATTCAGGATTACGTGTGGCCCAATaGGTTCTGATTTGTCGACCT | + |
|
Preference number: 5 (lower is better) Translates to: LPSMWSASGTGGEYQDSGLRVAQ*VLICRP Trigger: AGGTCGACAAATCAGAACCAATTGGGCCACACGTAA...TCCTGAATCCTGATACTCCCCTCCCGTCCCTGAGGCGGACCACATAGAAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | GAGTGTGACAGGAGACTGCAGCCTGTGGTGAATTACAATCGTGTTTCGAGTCCCTGGGTTTCCATACACTaGGCTCCACTGGCCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: ECDRRLQPVVNYNRVSSPWVSIH*APLAPL Trigger: CAGTGGGGCCAGTGGAGCCAAGTGTATGGAAACCCA...GGGACTCGAAACACGATTGTAATTCACCACAGGCTGCAGTCTCCTGTCACACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | TGTGACAGGAGACTGCAGCCTGTGGTGAATTACAATCGTGTTTCGAGTCCCAGCTGGGTTTCCATACACTaGGCTCCACTGGCCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: CDRRLQPVVNYNRVSSPSWVSIH*APLAPL Trigger: CAGTGGGGCCAGTGGAGCCAAGTGTATGGAAACCCA...GCTGGGACTCGAAACACGATTGTAATTCACCACAGGCTGCAGTCTCCTGTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | TCTGAAATCACACTTTCTCCTGCTGCCTTCTATGTGGTCCGCCTCAGGGACGGGTACTCCAAATCCTTGTaGGTTCCACGGCTGCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: SEITLSPAAFYVVRLRDGYSKSL*VPRLPI Trigger: TATGGGCAGCCGTGGAACCAACAAGGATTTGGAGTA...CCCGTCCCTGAGGCGGACCACATAGAAGGCAGCAGGAGAAAGTGTGATTTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | TCTGAAATCACACTTTCTCCTGCTGCCTTCTATGTGGTCCGCCTCAGGGACGGGCCCCCATATGCACAATaGCATTCTCTGCATCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SEITLSPAAFYVVRLRDGPPYAQ*HSLHPV Trigger: AACTGGATGCAGAGAATGCAATTGTGCATATGGGGG...CCCGTCCCTGAGGCGGACCACATAGAAGGCAGCAGGAGAAAGTGTGATTTCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | TCTGAAATCACACTTTCTCCTGCTGCCTTCTATGTGGTCCGCCTCAGGGACGGGTTACGTGTGGCCCAATaGGTTCTGATTTGTCGACCT | + |
|
Preference number: 5 (lower is better) Translates to: SEITLSPAAFYVVRLRDGLRVAQ*VLICRP Trigger: AGGTCGACAAATCAGAACCAATTGGGCCACACGTAA...CCCGTCCCTGAGGCGGACCACATAGAAGGCAGCAGGAGAAAGTGTGATTTCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | TCCATACCCAGCTTGGTTTGGAGGAGGTATTACAGGGGGAGGGGCTTGTCCTTGTGTTTGTCTCATAAGTaGATCTGTCAGCCCCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SIPSLVWRRYYRGRGLSLCLSHK*ICQPRS Trigger: GCTTCGGGGCTGACAGATCAACTTATGAGACAAACA...CAAGGACAAGCCCCTCCCCCTGTAATACCTCCTCCAAACCAAGCTGGGTATGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000133444.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGAACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCTGGGTTTCCATACACTaGGCTCCACTGGCCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GRTRRHVSFTKQSCAKGSWVSIH*APLAPL Trigger: CAGTGGGGCCAGTGGAGCCAAGTGTATGGAAACCCA...GGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGTTCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCTTCTATGTGGTCCGCCTCAGGGACGGGAGGGGAGTATCAGGATTCAGGAAAGCAATATGGGTCATaGCTTGTATGCTCTGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: LPSMWSASGTGGEYQDSGKQYGS*LVCSVI Trigger: GATAACAGAGCATACAAGCAATGACCCATATTGCTT...TCCTGAATCCTGATACTCCCCTCCCGTCCCTGAGGCGGACCACATAGAAGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | CTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTACAGGGGGAGGGGCTaGTCCTTGAGGAGGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LEDMCPSPSKAVLKVPNIYRGRG*SLRRLS Trigger: GCTCAGCCTCCTCAAGGACAAGCCCCTCCCCCTGTA...AATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 ENSMUST00000205835.2 |
||
| CDS-3UTR CAA 90 bp | AGAACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAATACAGGGGGAGGGGCTaGTCCTTGAGGAGGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RTRRHVSFTKQSCAKGSKYRGRG*SLRRLS Trigger: GCTCAGCCTCCTCAAGGACAAGCCCCTCCCCCTGTA...TTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 ENSMUST00000205835.2 |
||
| CDS-3UTR CAA 90 bp | CTATGTGGTCCGCCTCAGGGACGGGAGGGGAGTATCAGGATTCAGGACGAACTGGGGGCAAATGCTGATTaGATATCTTCTGTTGTAATT | + |
|
Preference number: 5 (lower is better) Translates to: LCGPPQGREGSIRIQDELGANAD*ISSVVI Trigger: AATTACAACAGAAGATATCAAATCAGCATTTGCCCC...CAGTTCGTCCTGAATCCTGATACTCCCCTCCCGTCCCTGAGGCGGACCACATAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | GAGTGTGACAGGAGACTGCAGCCTGTGGTGAATTACAATCGTGTTTCGAGTCCCTGTTTGTCTCATAAGTaGATCTGTCAGCCCCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ECDRRLQPVVNYNRVSSPCLSHK*ICQPRS Trigger: GCTTCGGGGCTGACAGATCAACTTATGAGACAAACA...GGGACTCGAAACACGATTGTAATTCACCACAGGCTGCAGTCTCCTGTCACACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000133444.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGAACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCCATACCCAGCTTGGTTaGGAGGAGGTATTACAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRTRRHVSFTKQSCAKGSHTQLG*EEVLQG Trigger: CCCCTGTAATACCTCCTCCAAACCAAGCTGGGTATG...GGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGTTCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 ENSMUST00000205835.2 |
||
| CDS-3UTR CAA 90 bp | GAGTGTGACAGGAGACTGCAGCCTGTGGTGAATTACAATCGTGTTTCGAGTCCCCATTCCATACCCAGCTaGGTTTGGAGGAGGTATTAC | + |
|
Preference number: 5 (lower is better) Translates to: ECDRRLQPVVNYNRVSSPHSIPS*VWRRYY Trigger: GTAATACCTCCTCCAAACCAAGCTGGGTATGGAATG...GGGACTCGAAACACGATTGTAATTCACCACAGGCTGCAGTCTCCTGTCACACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | CTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTGGGTTTCCATACACTaGGCTCCACTGGCCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LEDMCPSPSKAVLKVPNIWVSIH*APLAPL Trigger: CAGTGGGGCCAGTGGAGCCAAGTGTATGGAAACCCA...AATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGAACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCTACTCCAAATCCTTGTaGGTTCCACGGCTGCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: GRTRRHVSFTKQSCAKGSYSKSL*VPRLPI Trigger: TATGGGCAGCCGTGGAACCAACAAGGATTTGGAGTA...GGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGTTCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | AGCACTGCACTGGCAGCGAGCATGTTACTTGTCACCTCGAATAATTACATTGCTATCTACTCCAAATCCTaGTTGGTTCCACGGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: STALAASMLLVTSNNYIAIYSKS*LVPRLP Trigger: GGGCAGCCGTGGAACCAACAAGGATTTGGAGTAGAT...AGCAATGTAATTATTCGAGGTGACAAGTAACATGCTCGCTGCCAGTGCAGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 |
||
| CDS-3UTR CAA 90 bp | GACATCAGTGTTAACACTGCTACTGAGCACTGCACTGGCAGCGAGCATGTTACTAATCCAACAGAAGAGTaGACCCTTCTGCTATCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: DISVNTATEHCTGSEHVTNPTEE*TLLLSG Trigger: ACCCGATAGCAGAAGGGTCAACTCTTCTGTTGGATT...AGTAACATGCTCGCTGCCAGTGCAGTGCTCAGTAGCAGTGTTAACACTGATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106226.9 |
||
| CDS-3UTR CAA 90 bp | GGCAGAACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCTGTTTGTCTCATAAGTaGATCTGTCAGCCCCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRTRRHVSFTKQSCAKGSCLSHK*ICQPRS Trigger: GCTTCGGGGCTGACAGATCAACTTATGAGACAAACA...GGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGTTCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000133444.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | TGTGACAGGAGACTGCAGCCTGTGGTGAATTACAATCGTGTTTCGAGTCCCAGCATACTGTCCATACTGTaGTGGGTTTCCATACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: CDRRLQPVVNYNRVSSPSILSIL*WVSIHL Trigger: CAAGTGTATGGAAACCCACAACAGTATGGACAGTAT...GCTGGGACTCGAAACACGATTGTAATTCACCACAGGCTGCAGTCTCCTGTCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | GAGTGTGACAGGAGACTGCAGCCTGTGGTGAATTACAATCGTGTTTCGAGTCCCATACTGTCCATACTGTaGTGGGTTTCCATACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: ECDRRLQPVVNYNRVSSPILSIL*WVSIHL Trigger: CAAGTGTATGGAAACCCACAACAGTATGGACAGTAT...GGGACTCGAAACACGATTGTAATTCACCACAGGCTGCAGTCTCCTGTCACACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | GGGACGGGAGGGGAGTATCAGGATTCAGGACGAACTGATGTGATTCTCAGTTTTGTACTTGCCACCCATTaGCCATATACTGTCCATACT | + |
|
Preference number: 5 (lower is better) Translates to: GTGGEYQDSGRTDVILSFVLATH*PYTVHT Trigger: AGTATGGACAGTATATGGCAAATGGGTGGCAAGTAC...AAAACTGAGAATCACATCAGTTCGTCCTGAATCCTGATACTCCCCTCCCGTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | ATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTTTTTACAGGGGGAGGGGCTaGTCCTTGAGGAGGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MCPSPSKAVLKVPNISIFYRGRG*SLRRLS Trigger: GCTCAGCCTCCTCAAGGACAAGCCCCTCCCCCTGTA...AAAAATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACAT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 ENSMUST00000205835.2 |
||
| CDS-3UTR CAA 90 bp | GTTTCTTGTGTACTTTTAGGGGCAGGTGGTTTACGTGTGGCCCAATTGGTTCTGAATCCAACAGAAGAGTaGACCCTTCTGCTATCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VSCVLLGAGGLRVAQLVLNPTEE*TLLLSG Trigger: ACCCGATAGCAGAAGGGTCAACTCTTCTGTTGGATT...CAGAACCAATTGGGCCACACGTAAACCACCTGCCCCTAAAAGTACACAAGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205278.2 |
||
| CDS-3UTR CAA 90 bp | GCAGAACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCATCCATAGGGTGGTACTaGCCACCCATTTGCCATATA | + |
|
Preference number: 5 (lower is better) Translates to: AELEDMCPSPSKAVLKVPSIGWY*PPICHI Trigger: TATATGGCAAATGGGTGGCAAGTACCACCCTATGGA...TGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGTTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | AGAACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAAATCTACTCCAAATCCTaGTTGGTTCCACGGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RTRRHVSFTKQSCAKGSKIYSKS*LVPRLP Trigger: GGGCAGCCGTGGAACCAACAAGGATTTGGAGTAGAT...TTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | ACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATATCTACTCCAAATCCTaGTTGGTTCCACGGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TRRHVSFTKQSCAKGSKHIYSKS*LVPRLP Trigger: GGGCAGCCGTGGAACCAACAAGGATTTGGAGTAGAT...ATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | CTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTCATACCCAGCTTGGTTaGGAGGAGGTATTACAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LEDMCPSPSKAVLKVPNIHTQLG*EEVLQG Trigger: CCCCTGTAATACCTCCTCCAAACCAAGCTGGGTATG...AATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 ENSMUST00000205835.2 |
||
| CDS-3UTR CAA 90 bp | GAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCACATACCCAGCTTGGTTaGGAGGAGGTATTACAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: EDMCPSPSKAVLKVPNISHTQLG*EEVLQG Trigger: CCCCTGTAATACCTCCTCCAAACCAAGCTGGGTATG...TGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 ENSMUST00000205835.2 |
||
| CDS-3UTR CAA 90 bp | CATACACTTGGCTCCACTGGCCCCACTGACTGTAGTCAACCTGTTGGAAGTTTTAAGCAATATGGGTCATaGCTTGTATGCTCTGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: HTLGSTGPTDCSQPVGSFKQYGS*LVCSVI Trigger: GATAACAGAGCATACAAGCAATGACCCATATTGCTT...AAAACTTCCAACAGGTTGACTACAGTCAGTGGGGCCAGTGGAGCCAAGTGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123666.8 |
||
| CDS-3UTR CAA 90 bp | ATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTTTTTGGGTTTCCATACACTaGGCTCCACTGGCCCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: MCPSPSKAVLKVPNISIFWVSIH*APLAPL Trigger: CAGTGGGGCCAGTGGAGCCAAGTGTATGGAAACCCA...AAAAATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACAT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | GCAGAACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAGTACTTGCCACCCATTaGCCATATACTGTCCATACT | + |
|
Preference number: 5 (lower is better) Translates to: AELEDMCPSPSKAVLKVPVLATH*PYTVHT Trigger: AGTATGGACAGTATATGGCAAATGGGTGGCAAGTAC...TGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGTTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | GAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCATACTCCAAATCCTTGTaGGTTCCACGGCTGCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: EDMCPSPSKAVLKVPNISYSKSL*VPRLPI Trigger: TATGGGCAGCCGTGGAACCAACAAGGATTTGGAGTA...TGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | AGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATCATACCCAGCTTGGTTaGGAGGAGGTATTACAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RHVSFTKQSCAKGSKHFNHTQLG*EEVLQG Trigger: CCCCTGTAATACCTCCTCCAAACCAAGCTGGGTATG...ATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 ENSMUST00000205835.2 |
||
| CDS-3UTR CAA 90 bp | GCCATATACTGTCCATACTGTTGTGGGTTTCCATACACTTGGCTCCACTGGCCCTCATCATTTTGGAGTTaGGGCAGGATATTTTACCAA | + |
|
Preference number: 5 (lower is better) Translates to: AIYCPYCCGFPYTWLHWPSSFWS*GRIFYQ Trigger: TTGGTAAAATATCCTGCCCAAACTCCAAAATGATGA...GGGCCAGTGGAGCCAAGTGTATGGAAACCCACAACAGTATGGACAGTATATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133089.8 |
||
| CDS-3UTR CAA 90 bp | TCCACGGCTGCCCATATACTCCATAGGGTGGTACTTGCCACCCATTTGCCATATTTCTCTATCATCATTTaGGAGTTTGGGCAGGATATT | + |
|
Preference number: 5 (lower is better) Translates to: STAAHILHRVVLATHLPYFSIII*EFGQDI Trigger: AATATCCTGCCCAAACTCCAAAATGATGATAGAGAA...ATATGGCAAATGGGTGGCAAGTACCACCCTATGGAGTATATGGGCAGCCGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133089.8 |
||
| CDS-3UTR CAA 90 bp | CTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTCCCCCATATGCACAATaGCATTCTCTGCATCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LEDMCPSPSKAVLKVPNIPPYAQ*HSLHPV Trigger: AACTGGATGCAGAGAATGCAATTGTGCATATGGGGG...AATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | CTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTTACGTGTGGCCCAATaGGTTCTGATTTGTCGACCT | + |
|
Preference number: 5 (lower is better) Translates to: LEDMCPSPSKAVLKVPNILRVAQ*VLICRP Trigger: AGGTCGACAAATCAGAACCAATTGGGCCACACGTAA...AATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | AGAACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAATTACGTGTGGCCCAATaGGTTCTGATTTGTCGACCT | + |
|
Preference number: 5 (lower is better) Translates to: RTRRHVSFTKQSCAKGSKLRVAQ*VLICRP Trigger: AGGTCGACAAATCAGAACCAATTGGGCCACACGTAA...TTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | AGAACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAATGTTTGTCTCATAAGTaGATCTGTCAGCCCCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RTRRHVSFTKQSCAKGSKCLSHK*ICQPRS Trigger: GCTTCGGGGCTGACAGATCAACTTATGAGACAAACA...TTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000133444.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | CTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTGTTTGTCTCATAAGTaGATCTGTCAGCCCCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LEDMCPSPSKAVLKVPNICLSHK*ICQPRS Trigger: GCTTCGGGGCTGACAGATCAACTTATGAGACAAACA...AATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000133444.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | GAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCATGTTTGTCTCATAAGTaGATCTGTCAGCCCCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: EDMCPSPSKAVLKVPNISCLSHK*ICQPRS Trigger: GCTTCGGGGCTGACAGATCAACTTATGAGACAAACA...TGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000133444.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | GACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTTACTCCAAATCCTTGTaGGTTCCACGGCTGCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: DMCPSPSKAVLKVPNISIYSKSL*VPRLPI Trigger: TATGGGCAGCCGTGGAACCAACAAGGATTTGGAGTA...AATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | CATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTTTATCTACTCCAAATCCTaGTTGGTTCCACGGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HVSFTKQSCAKGSKHFNFIYSKS*LVPRLP Trigger: GGGCAGCCGTGGAACCAACAAGGATTTGGAGTAGAT...AAAATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | ACTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATCATTCCATACCCAGCTaGGTTTGGAGGAGGTATTAC | + |
|
Preference number: 5 (lower is better) Translates to: TRRHVSFTKQSCAKGSKHHSIPS*VWRRYY Trigger: GTAATACCTCCTCCAAACCAAGCTGGGTATGGAATG...ATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 ENSMUST00000205835.2 |
||
| CDS-3UTR CAA 90 bp | CTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTCATTCCATACCCAGCTaGGTTTGGAGGAGGTATTAC | + |
|
Preference number: 5 (lower is better) Translates to: LEDMCPSPSKAVLKVPNIHSIPS*VWRRYY Trigger: GTAATACCTCCTCCAAACCAAGCTGGGTATGGAATG...AATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 ENSMUST00000205835.2 |
||
| CDS-3UTR CAA 90 bp | GACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTCCCCCATATGCACAATaGCATTCTCTGCATCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: DMCPSPSKAVLKVPNISIPPYAQ*HSLHPV Trigger: AACTGGATGCAGAGAATGCAATTGTGCATATGGGGG...AATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | CTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTGTACTTGCCACCCATTaGCCATATACTGTCCATACT | + |
|
Preference number: 5 (lower is better) Translates to: LEDMCPSPSKAVLKVPNIVLATH*PYTVHT Trigger: AGTATGGACAGTATATGGCAAATGGGTGGCAAGTAC...AATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | AGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTCCATAGGGTGGTACTaGCCACCCATTTGCCATATA | + |
|
Preference number: 5 (lower is better) Translates to: RHVSFTKQSCAKGSKHFNSIGWY*PPICHI Trigger: TATATGGCAAATGGGTGGCAAGTACCACCCTATGGA...ATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | ATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTTTTCATACCCAGCTTGGTTaGGAGGAGGTATTACAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: MCPSPSKAVLKVPNISIFHTQLG*EEVLQG Trigger: CCCCTGTAATACCTCCTCCAAACCAAGCTGGGTATG...AAAAATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 ENSMUST00000205835.2 |
||
| CDS-3UTR CAA 90 bp | AGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATCATTCCATACCCAGCTaGGTTTGGAGGAGGTATTAC | + |
|
Preference number: 5 (lower is better) Translates to: RHVSFTKQSCAKGSKHFNHSIPS*VWRRYY Trigger: GTAATACCTCCTCCAAACCAAGCTGGGTATGGAATG...ATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 ENSMUST00000205835.2 |
||
| CDS-3UTR CAA 90 bp | AGCACTGCACTGGCAGCGAGCATGTTACTTGTCACCTCGAATAATTACATTGCTGGGGCAAATGCTGATTaGATATCTTCTGTTGTAATT | + |
|
Preference number: 5 (lower is better) Translates to: STALAASMLLVTSNNYIAGANAD*ISSVVI Trigger: AATTACAACAGAAGATATCAAATCAGCATTTGCCCC...AGCAATGTAATTATTCGAGGTGACAAGTAACATGCTCGCTGCCAGTGCAGTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 |
||
| CDS-3UTR CAA 90 bp | GTTAGTTTCTTGTGTACTTTTAGGGGCAGGTGGTTTACGTGTGGCCCAATTGGTGGGGCAAATGCTGATTaGATATCTTCTGTTGTAATT | + |
|
Preference number: 5 (lower is better) Translates to: VSFLCTFRGRWFTCGPIGGANAD*ISSVVI Trigger: AATTACAACAGAAGATATCAAATCAGCATTTGCCCC...ACCAATTGGGCCACACGTAAACCACCTGCCCCTAAAAGTACACAAGAAACTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000123666.8 ENSMUST00000133089.8 ENSMUST00000205278.2 |
||
| CDS-3UTR CAA 90 bp | CATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTTTTTACGTGTGGCCCAATaGGTTCTGATTTGTCGACCT | + |
|
Preference number: 5 (lower is better) Translates to: HVSFTKQSCAKGSKHFNFLRVAQ*VLICRP Trigger: AGGTCGACAAATCAGAACCAATTGGGCCACACGTAA...AAAATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | GACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTGTACTTGCCACCCATTaGCCATATACTGTCCATACT | + |
|
Preference number: 5 (lower is better) Translates to: DMCPSPSKAVLKVPNISIVLATH*PYTVHT Trigger: AGTATGGACAGTATATGGCAAATGGGTGGCAAGTAC...AATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | GTTAGTTTCTTGTGTACTTTTAGGGGCAGGTGGTTTACGTGTGGCCCAATTGGTAATATGGGTCATTGCTaGTATGCTGCAAAACAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: VSFLCTFRGRWFTCGPIGNMGHC*YAAKQK Trigger: TTTCTGTTTTGCAGCATACAAGCAATGACCCATATT...ACCAATTGGGCCACACGTAAACCACCTGCCCCTAAAAGTACACAAGAAACTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000205278.2 |
||
| CDS-3UTR CAA 90 bp | TTAGTTTCTTGTGTACTTTTAGGGGCAGGTGGTTTACGTGTGGCCCAATTGGTTAAGCAATATGGGTCATaGCTTGTATGCTGCAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: LVSCVLLGAGGLRVAQLVKQYGS*LVCCKT Trigger: TGTTTTGCAGCATACAAGCAATGACCCATATTGCTT...AACCAATTGGGCCACACGTAAACCACCTGCCCCTAAAAGTACACAAGAAACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000205278.2 |
||
| CDS-3UTR CAA 90 bp | CTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTAGCAGCAGAAGGGGATaGACTCTGTTATCATTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: LEDMCPSPSKAVLKVPNISSRRG*TLLSFY Trigger: GTAAAATGATAACAGAGTCAATCCCCTTCTGCTGCT...AATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205835.2 |
||
| CDS-3UTR CAA 90 bp | CTAGAAGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTAAGCAATATGGGTCATaGCTTGTATGCTCTGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: LEDMCPSPSKAVLKVPNIKQYGS*LVCSVI Trigger: GATAACAGAGCATACAAGCAATGACCCATATTGCTT...AATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCTTCTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033135.9 ENSMUST00000106228.8 ENSMUST00000123666.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | AGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATGTTGCCCAGTTTACTTaGACCTCCTTTCCCAAAATT | + |
|
Preference number: 5 (lower is better) Translates to: RHVSFTKQSCAKGSKHFNVAQFT*TSFPKI Trigger: AATTTTGGGAAAGGAGGTCAAAGTAAACTGGGCAAC...ATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000123666.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | ATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTTTTCCCCCATATGCACAATaGCATTCTCTGCATCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: MCPSPSKAVLKVPNISIFPPYAQ*HSLHPV Trigger: AACTGGATGCAGAGAATGCAATTGTGCATATGGGGG...AAAAATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | AGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATATACTGTCCATACTGTaGTGGGTTTCCATACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: RHVSFTKQSCAKGSKHFNILSIL*WVSIHL Trigger: CAAGTGTATGGAAACCCACAACAGTATGGACAGTAT...ATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | ATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTTTTTCCATAGGGTGGTACTaGCCACCCATTTGCCATATA | + |
|
Preference number: 5 (lower is better) Translates to: MCPSPSKAVLKVPNISIFSIGWY*PPICHI Trigger: TATATGGCAAATGGGTGGCAAGTACCACCCTATGGA...AAAAATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACAT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | AGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATAAGCAATATGGGTCATaGCTTGTATGCTCTGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: RHVSFTKQSCAKGSKHFNKQYGS*LVCSVI Trigger: GATAACAGAGCATACAAGCAATGACCCATATTGCTT...ATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033135.9 ENSMUST00000106228.8 ENSMUST00000123666.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | CATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTTTATACTGTCCATACTGTaGTGGGTTTCCATACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: HVSFTKQSCAKGSKHFNFILSIL*WVSIHL Trigger: CAAGTGTATGGAAACCCACAACAGTATGGACAGTAT...AAAATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000141126.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | ATTAAATTAAGGCTTCTTCTGTGTAGTCATTTGTGTCCTTCTCCTTTTACATGGCATTCCATACCCAGCTaGGTTTGGAGGAGGTATTAC | + |
|
Preference number: 5 (lower is better) Translates to: IKLRLLLCSHLCPSPFTWHSIPS*VWRRYY Trigger: GTAATACCTCCTCCAAACCAAGCTGGGTATGGAATG...CCATGTAAAAGGAGAAGGACACAAATGACTACACAGAAGAAGCCTTAATTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106226.9 ENSMUST00000106228.8 |
||
| CDS-3UTR CAA 90 bp | AGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATAAGCAATATGGGTCATaGCTTGTATGCTGCAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: RHVSFTKQSCAKGSKHFNKQYGS*LVCCKT Trigger: TGTTTTGCAGCATACAAGCAATGACCCATATTGCTT...ATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106226.9 |
||
| CDS-3UTR CAA 90 bp | GACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTGGGGCAAATGCTGATTaGATATCTTCTGTTGTAATT | + |
|
Preference number: 5 (lower is better) Translates to: DMCPSPSKAVLKVPNISIGANAD*ISSVVI Trigger: AATTACAACAGAAGATATCAAATCAGCATTTGCCCC...AATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000123666.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | AGACATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATGGGGCAAATGCTGATTaGATATCTTCTGTTGTAATT | + |
|
Preference number: 5 (lower is better) Translates to: RHVSFTKQSCAKGSKHFNGANAD*ISSVVI Trigger: AATTACAACAGAAGATATCAAATCAGCATTTGCCCC...ATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000123666.8 ENSMUST00000165023.8 |
||
| CDS-3UTR CAA 90 bp | CTTATAGCAACCCTGAAATCACTTCACTGGGTTTTAATCAAGGTATTTATGTACGTACTTGCCACCCATTaGCCATATACTGTCCATACT | + |
|
Preference number: 5 (lower is better) Translates to: LIATLKSLHWVLIKVFMYVLATH*PYTVHT Trigger: AGTATGGACAGTATATGGCAAATGGGTGGCAAGTAC...GTACATAAATACCTTGATTAAAACCCAGTGAAGTGATTTCAGGGTTGCTATAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106226.9 |
||
| CDS-3UTR CAA 90 bp | CTGACTGTAGTCAACCTGTTGGAAGTTTTTAGTCATATCAGGAGATTCTTTACCGGGGCAAATGCTGATTaGATATCTTCTGTTGTAATT | + |
|
Preference number: 5 (lower is better) Translates to: LTVVNLLEVFSHIRRFFTGANAD*ISSVVI Trigger: AATTACAACAGAAGATATCAAATCAGCATTTGCCCC...GGTAAAGAATCTCCTGATATGACTAAAAACTTCCAACAGGTTGACTACAGTCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000123666.8 ENSMUST00000133089.8 |
||
| CDS-3UTR CAA 90 bp | CATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTTTAATATGGGTCATTGCTaGTATGCTGCAAAACAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: HVSFTKQSCAKGSKHFNFNMGHC*YAAKQK Trigger: TTTCTGTTTTGCAGCATACAAGCAATGACCCATATT...AAAATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106226.9 |
||
| CDS-3UTR CAA 90 bp | ATGTGTCCTTCACCAAGCAAAGCTGTGCTAAAGGTTCCAAACATTTCAATTTTTGGGGCAAATGCTGATTaGATATCTTCTGTTGTAATT | + |
|
Preference number: 5 (lower is better) Translates to: MCPSPSKAVLKVPNISIFGANAD*ISSVVI Trigger: AATTACAACAGAAGATATCAAATCAGCATTTGCCCC...AAAAATTGAAATGTTTGGAACCTTTAGCACAGCTTTGCTTGGTGAAGGACACAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033135.9 ENSMUST00000106226.9 ENSMUST00000106228.8 ENSMUST00000123666.8 ENSMUST00000165023.8 |
||