Pregenerated sensors for THTPA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045691Ensembl transcript IDs: ENSMUST00000050575.9
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTCCAGGAAGGATAGCTCAGAGTGGGCGAAAGACCAGGCAGAGCTaGAGGGGAAAGTGGCTCCGTTGTAAGGGAAAGGAGCACCGTGGG | + |
|
Preference number: 1 (lower is better) Translates to: APGRIAQSGRKTRQS*RGKWLRCKGKEHRG Trigger: CCCACGGTGCTCCTTTCCCTTACAACGGAGCCACTTTCCCCTCCAGCTCTGCCTGGTCTTTCGCCCACTCTGAGCTATCCTTCCTGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR GCA 90 bp | AAGCTTGCCTGCCTCATAACTGCCTCGGCTCCTCTCAAATCTTTCTaGACCCTCAGCTTGGGACACAACCCTGAGGGCCACCAGCAGGTG | + |
|
Preference number: 1 (lower is better) Translates to: KLACLITASAPLKSF*TLSLGHNPEGHQQV Trigger: CACCTGCTGGTGGCCCTCAGGGTTGTGTCCCAAGCTGAGGGTGCAGAAAGATTTGAGAGGAGCCGAGGCAGTTATGAGGCAGGCAAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR CCA 90 bp | ATAGCTCAGAGTGGGCGAAAGACCAGGCAGAGCTGGAGGGGAAAGTaGCTCCGTTGTAAGGGAAAGGAGCACCGTGGGTCCGGATGTGAA | + |
|
Preference number: 1 (lower is better) Translates to: IAQSGRKTRQSWRGK*LRCKGKEHRGSGCE Trigger: TTCACATCCGGACCCACGGTGCTCCTTTCCCTTACAACGGAGCCACTTTCCCCTCCAGCTCTGCCTGGTCTTTCGCCCACTCTGAGCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR GCA 90 bp | CTTTCTACCCCTCTCTGGGTTGGAGAGCAAATGTTCTCTCTAAACTaGCACACTGAGCACTCTACCCTCCCGGCACAGCAGCAGGCCCTG | + |
|
Preference number: 1 (lower is better) Translates to: LSTPLWVGEQMFSLN*HTEHSTLPAQQQAL Trigger: CAGGGCCTGCTGCTGTGCCGGGAGGGTAGAGTGCTCAGTGTGGCAGTTTAGAGAGAACATTTGCTCTCCAACCCAGAGAGGGGTAGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR TCA 90 bp | GGCTCCTCTCAAATCTTTCTGCACCCTCAGCTTGGGACACAACCCTaGGGGCCACCAGCAGGTGGCACTCAGACCCTATATTTGTCAAGG | + |
|
Preference number: 1 (lower is better) Translates to: GSSQIFLHPQLGTQP*GPPAGGTQTLYLSR Trigger: CCTTGACAAATATAGGGTCTGAGTGCCACCTGCTGGTGGCCCTCAGGGTTGTGTCCCAAGCTGAGGGTGCAGAAAGATTTGAGAGGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR TCA 90 bp | ACTGCCACACTGAGCACTCTACCCTCCCGGCACAGCAGCAGGCCCTaGATTTCTAGATCCCTTAAGGAGTTCCTAACCTTTTCCCCACCT | + |
|
Preference number: 1 (lower is better) Translates to: TATLSTLPSRHSSRP*ISRSLKEFLTFSPP Trigger: AGGTGGGGAAAAGGTTAGGAACTCCTTAAGGGATCTAGAAATTCAGGGCCTGCTGCTGTGCCGGGAGGGTAGAGTGCTCAGTGTGGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR TCA 90 bp | CCCTCTCTGGGTTGGAGAGCAAATGTTCTCTCTAAACTGCCACACTaGGCACTCTACCCTCCCGGCACAGCAGCAGGCCCTGAATTTCTA | + |
|
Preference number: 1 (lower is better) Translates to: PSLGWRANVLSKLPH*ALYPPGTAAGPEFL Trigger: TAGAAATTCAGGGCCTGCTGCTGTGCCGGGAGGGTAGAGTGCTCAGTGTGGCAGTTTAGAGAGAACATTTGCTCTCCAACCCAGAGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR-3UTR TCA 90 bp | GCTCAAACCAAGTGGAGTTCCAGGCTGCTAACCTGTTCCCTAAGCTTGCCTGCCCCCACAGATTGCATCTaGCGGATGAGGGAAGCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: AQTKWSSRLLTCSLSLPAPTDCI*RMREAA Trigger: GGCTGCTTCCCTCATCCGTCAGATGCAATCTGTGGG...GGCAGGCAAGCTTAGGGAACAGGTTAGCAGCCTGGAACTCCACTTGGTTTGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGCCTCATAACTGCCTCGGCTCCTCTCAAATCTTTCTGCACCCTCAGCTTGGGACGAGCGGAAATCAATaGAGGCTGCTTAGCGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LPHNCLGSSQIFLHPQLGTSGNQ*RLLSGQ Trigger: CTGGCCGCTAAGCAGCCTCCATTGATTTCCGCTCGT...CCCAAGCTGAGGGTGCAGAAAGATTTGAGAGGAGCCGAGGCAGTTATGAGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR-3UTR TCA 90 bp | CCTCTCAAATCTTTCTGCACCCTCAGCTTGGGACACAACCCTGAGGGCCACCAGAAAGTCTATGAAGCGTaGGAAGGGAAGAGAGGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: PLKSFCTLSLGHNPEGHQKVYEA*EGKRGL Trigger: CAGGCCTCTCTTCCCTTCTCACGCTTCATAGACTTT...CTGGTGGCCCTCAGGGTTGTGTCCCAAGCTGAGGGTGCAGAAAGATTTGAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGCCTCATAACTGCCTCGGCTCCTCTCAAATCTTTCTGCACCCTCAGCTTGGGAGCTGGAGGGGAAAGTaGCTCCGTTGTAAGGGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LPHNCLGSSQIFLHPQLGSWRGK*LRCKGK Trigger: CTTTCCCTTACAACGGAGCCACTTTCCCCTCCAGCT...CCCAAGCTGAGGGTGCAGAAAGATTTGAGAGGAGCCGAGGCAGTTATGAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR-3UTR CCA 90 bp | CCAAGTGGCAGTGAGATGAGAGGTGTGCATAGCTCAAACCAAGTGGAGTTCCAGCTCTGGCAGAATCAATaGCATCGACCAAGGGAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: PSGSEMRGVHSSNQVEFQLWQNQ*HRPREG Trigger: CCCCTCCCTTGGTCGATGCCATTGATTCTGCCAGAG...CTGGAACTCCACTTGGTTTGAGCTATGCACACCTCTCATCTCACTGCCACTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR-3UTR CCA 90 bp | CCTCTCAAATCTTTCTGCACCCTCAGCTTGGGACACAACCCTGAGGGCCACCAGTACCCCTCTCTGGGTTaGAGAGCAAATGTTCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: PLKSFCTLSLGHNPEGHQYPSLG*RANVLS Trigger: AGAGAGAACATTTGCTCTCCAACCCAGAGAGGGGTA...CTGGTGGCCCTCAGGGTTGTGTCCCAAGCTGAGGGTGCAGAAAGATTTGAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR-3UTR TCA 90 bp | AAGTGGCATAATTTGAGTGATTCTCTGTTTTCATTGACAGGCTTGGATTCTGTCCTTGGGACACAACCCTaGGGGCCACCAGCAGGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: KWHNLSDSLFSLTGLDSVLGTQP*GPPAGG Trigger: GCCACCTGCTGGTGGCCCTCAGGGTTGTGTCCCAAG...GACAGAATCCAAGCCTGTCAATGAAAACAGAGAATCACTCAAATTATGCCACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR-3UTR TCA 90 bp | CCAGCAGGTGGCACTCAGACCCTATATTTGTCAAGGCAATATAGAGAGCCTGCCAACCGGTCTCAACAATaGCCATTTTCTTTCTACCCC | + |
|
Preference number: 2 (lower is better) Translates to: PAGGTQTLYLSRQYREPANRSQQ*PFSFYP Trigger: GGGGTAGAAAGAAAATGGTCATTGTTGAGACCGGTT...GGCAGGCTCTCTATATTGCCTTGACAAATATAGGGTCTGAGTGCCACCTGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR-3UTR CCA 90 bp | CATTTTCTTTCTACCCCTCTCTGGGTTGGAGAGCAAATGTTCTCTCTAAACTGCCGGCTTCAGAGCCTCTaGCAGAATCAATGGCATCGA | + |
|
Preference number: 2 (lower is better) Translates to: HFLSTPLWVGEQMFSLNCRLQSL*QNQWHR Trigger: TCGATGCCATTGATTCTGCCAGAGGCTCTGAAGCCG...GCAGTTTAGAGAGAACATTTGCTCTCCAACCCAGAGAGGGGTAGAAAGAAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTATGAAGCGTGAGAAGGGAAGAGAGGCCTGTTTTGACCTAGTTGAGAGAAAACAAGGGATTTTCCTGTaGTTAACTACTGATCACGGC | + |
|
Preference number: 2 (lower is better) Translates to: SMKREKGREACFDLVERKQGIFL*LTTDHG Trigger: GCCGTGATCAGTAGTTAAGCACAGGAAAATCCCTTG...TTTTCTCTCAACTAGGTCAAAACAGGCCTCTCTTCCCTTCTCACGCTTCATAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR-3UTR TCA 90 bp | AAGTGGCATAATTTGAGTGATTCTCTGTTTTCATTGACAGGCTTGGATTCTGTCGGAAGTATGACTTCCTaGAACCCTAGGAACCGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: KWHNLSDSLFSLTGLDSVGSMTS*NPRNRS Trigger: AGACCGGTTCCTAGGGTTTCAGGAAGTCATACTTCC...GACAGAATCCAAGCCTGTCAATGAAAACAGAGAATCACTCAAATTATGCCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR-3UTR CCA 90 bp | CATTTTCTTTCTACCCCTCTCTGGGTTGGAGAGCAAATGTTCTCTCTAAACTGCCTGATCACGGCTAAGTaGAAATCCTATAAACACGAG | + |
|
Preference number: 2 (lower is better) Translates to: HFLSTPLWVGEQMFSLNCLITAK*KSYKHE Trigger: CTCGTGTTTATAGGATTTCCACTTAGCCGTGATCAG...GCAGTTTAGAGAGAACATTTGCTCTCCAACCCAGAGAGGGGTAGAAAGAAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTAACTCAGCTGTAAGGCGGCTTCAGAGCCTCTGGCAGAATCAATGGCATCGAGGGGCGGCCCACAGATaGCATCTGACGGATGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SNSAVRRLQSLWQNQWHRGAAHR*HLTDEG Trigger: TCCCTCATCCGTCAGATGCAATCTGTGGGCCGCCCC...TCGATGCCATTGATTCTGCCAGAGGCTCTGAAGCCGCCTTACAGCTGAGTTAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR TCA 72 bp | GGTTGGAGAGCAAATGTTCTCTCTAAACTGCCACACTaGGCACTCTACCCTCCCGGCACAGCAGCAGGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: GWRANVLSKLPH*ALYPPGTAAGP Trigger: AGGGCCTGCTGCTGTGCCGGGAGGGTAGAGTGCTCAGTGTGGCAGTTTAGAGAGAACATTTGCTCTCCAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR GCA 72 bp | TGCCTCATAACTGCCTCGGCTCCTCTCAAATCTTTCTaGACCCTCAGCTTGGGACACAACCCTGAGGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: CLITASAPLKSF*TLSLGHNPEGH Trigger: GTGGCCCTCAGGGTTGTGTCCCAAGCTGAGGGTGCAGAAAGATTTGAGAGGAGCCGAGGCAGTTATGAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR CCA 72 bp | CTAAGTGGAAATCCTATAAACACGAGCGGAAATCAATaGAGGCTGCTTAGCGGCCAGGGGAGAGGGGCGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LSGNPINTSGNQ*RLLSGQGRGAA Trigger: GGCCGCCCCTCTCCCCTGGCCGCTAAGCAGCCTCCATTGATTTCCGCTCGTGTTTATAGGATTTCCACTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR TCA 72 bp | CAAATCTTTCTGCACCCTCAGCTTGGGACACAACCCTaGGGGCCACCAGCAGGTGGCACTCAGACCCTATAT | + |
|
Preference number: 3 (lower is better) Translates to: QIFLHPQLGTQP*GPPAGGTQTLY Trigger: ATATAGGGTCTGAGTGCCACCTGCTGGTGGCCCTCAGGGTTGTGTCCCAAGCTGAGGGTGCAGAAAGATTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR GCA 72 bp | GCTCTAAGTGCTACTCGATACAGGCGGGGTCCTGGCTaGACTGTTAGAAGAATGTGTGTGCATGGTGCGTGC | + |
|
Preference number: 3 (lower is better) Translates to: ALSATRYRRGPG*TVRRMCVHGAC Trigger: GCACGCACCATGCACACACATTCTTCTAACAGTGCAGCCAGGACCCCGCCTGTATCGAGTAGCACTTAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR TCA 72 bp | CTGAGCACTCTACCCTCCCGGCACAGCAGCAGGCCCTaGATTTCTAGATCCCTTAAGGAGTTCCTAACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: LSTLPSRHSSRP*ISRSLKEFLTF Trigger: AAAGGTTAGGAACTCCTTAAGGGATCTAGAAATTCAGGGCCTGCTGCTGTGCCGGGAGGGTAGAGTGCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR GCA 72 bp | GAGTTCCAGGCTGCTAACCTGTTCCCTAAGCTTGCCTaGCTCATAACTGCCTCGGCTCCTCTCAAATCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: EFQAANLFPKLA*LITASAPLKSF Trigger: GAAAGATTTGAGAGGAGCCGAGGCAGTTATGAGGCAGGCAAGCTTAGGGAACAGGTTAGCAGCCTGGAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR GCA 72 bp | GGAAAGAGAGATTTACTGTCTGAAGTGGGCTCTAAGTaGTACTCGATACAGGCGGGGTCCTGGCTGCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: GKRDLLSEVGSK*YSIQAGSWLHC Trigger: ACAGTGCAGCCAGGACCCCGCCTGTATCGAGTAGCACTTAGAGCCCACTTCAGACAGTAAATCTCTCTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR CCA 72 bp | ATGGCTGCTGGGGAAAGAGAGATTTACTGTCTGAAGTaGGCTCTAAGTGCTACTCGATACAGGCGGGGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: MAAGEREIYCLK*ALSATRYRRGP Trigger: AGGACCCCGCCTGTATCGAGTAGCACTTAGAGCCCACTTCAGACAGTAAATCTCTCTTTCCCCAGCAGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCAGGTGGCACTCAGACCCTATATTTGTCAAGGCAATATAGAGAGCCTGCCCTACCCCTCTCTGGGTaGGAGAGCAAATGTTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PAGGTQTLYLSRQYREPALPLSG*ESKCSL Trigger: GAGAGAACATTTGCTCTCCAACCCAGAGAGGGGTAG...GGCAGGCTCTCTATATTGCCTTGACAAATATAGGGTCTGAGTGCCACCTGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTCAAATCTTTCTGCACCCTCAGCTTGGGACACAACCCTGAGGGCCACCAGACTCAGACCCTATATTaGTCAAGGCAATATAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PLKSFCTLSLGHNPEGHQTQTLY*SRQYRE Trigger: CTCTCTATATTGCCTTGACAAATATAGGGTCTGAGT...CTGGTGGCCCTCAGGGTTGTGTCCCAAGCTGAGGGTGCAGAAAGATTTGAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR CCA 72 bp | GGTCTCAACAATGACCATTTTCTTTCTACCCCTCTCTaGGTTGGAGAGCAAATGTTCTCTCTAAACTGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GLNNDHFLSTPL*VGEQMFSLNCH Trigger: GTGGCAGTTTAGAGAGAACATTTGCTCTCCAACCCAGAGAGGGGTAGAAAGAAAATGGTCATTGTTGAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGTGGCATAATTTGAGTGATTCTCTGTTTTCATTGACAGGCTTGGATTCTGTCAATCAGCTCCCTACTTaGGGGTATGTCCTAAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: KWHNLSDSLFSLTGLDSVNQLPT*GYVLKC Trigger: ACACTTTAGGACATACCCCAAAGTAGGGAGCTGATT...GACAGAATCCAAGCCTGTCAATGAAAACAGAGAATCACTCAAATTATGCCACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS-3UTR GCA 90 bp | AACACGAGCGGAAATCAATGGAGGCTGCTTAGCGGCCAGGGGAGAGGGGCGGCCCATGAGCTTGGCTGGTaGCTCCTCCTGTGCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NTSGNQWRLLSGQGRGAAHELGW*LLLCWH Trigger: GTGCCAGCACAGGAGGAGGCACCAGCCAAGCTCATG...GGCCGCCCCTCTCCCCTGGCCGCTAAGCAGCCTCCATTGATTTCCGCTCGTGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS-3UTR GCA 90 bp | CCTCTCAAATCTTTCTGCACCCTCAGCTTGGGACACAACCCTGAGGGCCACCAGCGGAAGGTGACCCGGTaGTCCAGGGTGGCCCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PLKSFCTLSLGHNPEGHQRKVTR*SRVAPN Trigger: GTTGGGGGCCACCCTGGAGCACCGGGTCACCTTCCG...CTGGTGGCCCTCAGGGTTGTGTCCCAAGCTGAGGGTGCAGAAAGATTTGAGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS-3UTR CCA 90 bp | AACACGAGCGGAAATCAATGGAGGCTGCTTAGCGGCCAGGGGAGAGGGGCGGCCTGCCTCCTCCTGTGCTaGCACTCCAAGCATGCTACT | + |
|
Preference number: 4 (lower is better) Translates to: NTSGNQWRLLSGQGRGAACLLLC*HSKHAT Trigger: AGTAGCATGCTTGGAGTGCCAGCACAGGAGGAGGCA...GGCCGCCCCTCTCCCCTGGCCGCTAAGCAGCCTCCATTGATTTCCGCTCGTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAGGATAGCTCAGAGTGGGCGAAAGACCAGGCAGAGCTGGAGGGGAAAGGTGGCCCCCAACTCCTaGAGCCTTTCCTCCGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGRIAQSGRKTRQSWRGKVAPNS*SLSSVS Trigger: TGACACGGAGGAAAGGCTGCAGGAGTTGGGGGCCAC...CTTTCCCCTCCAGCTCTGCCTGGTCTTTCGCCCACTCTGAGCTATCCTTCCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAGGATAGCTCAGAGTGGGCGAAAGACCAGGCAGAGCTGGAGGGGAAAGCTCCGTGTCAGGCCCTaGAGCGAACTTTCGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PGRIAQSGRKTRQSWRGKLRVRP*SELSLH Trigger: GTGGAGCGAAAGTTCGCTCCAGGGCCTGACACGGAG...CTTTCCCCTCCAGCTCTGCCTGGTCTTTCGCCCACTCTGAGCTATCCTTCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS-3UTR TCA 90 bp | GGAAATCCTATAAACACGAGCGGAAATCAATGGAGGCTGCTTAGCGGCCAGGGGATGTGTCTCGGAAGGTaGCCCGGTGCTCCAGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GNPINTSGNQWRLLSGQGMCLGR*PGAPGW Trigger: CCACCCTGGAGCACCGGGTCACCTTCCGAGACACAT...CCCCTGGCCGCTAAGCAGCCTCCATTGATTTCCGCTCGTGTTTATAGGATTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS-3UTR TCA 90 bp | AACACGAGCGGAAATCAATGGAGGCTGCTTAGCGGCCAGGGGAGAGGGGCGGCCTTACTCCAGGACATTTaGGCTCCCATCCACTACCTT | + |
|
Preference number: 4 (lower is better) Translates to: NTSGNQWRLLSGQGRGAALLQDI*APIHYL Trigger: AAGGTAGTGGATGGGAGCTCAAATGTCCTGGAGTAA...GGCCGCCCCTCTCCCCTGGCCGCTAAGCAGCCTCCATTGATTTCCGCTCGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCTCATAACTGCCTCGGCTCCTCTCAAATCTTTCTGCACCCTCAGCTTGGGGACAGCAGCCACACCTaGAGGCTTCTGCTCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPHNCLGSSQIFLHPQLGDSSHT*RLLLPR Trigger: TCTGGGGAGCAGAAGCCTGCAGGTGTGGCTGCTGTC...CCCAAGCTGAGGGTGCAGAAAGATTTGAGAGGAGCCGAGGCAGTTATGAGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS-3UTR CCA 90 bp | AAATCTTTCTGCACCCTCAGCTTGGGACACAACCCTGAGGGCCACCAGCAGGTGTACCATGAGCTTGGCTaGTGCCTCCTCCTGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSFCTLSLGHNPEGHQQVYHELG*CLLLCW Trigger: CCAGCACAGGAGGAGGCACCAGCCAAGCTCATGGTA...CACCTGCTGGTGGCCCTCAGGGTTGTGTCCCAAGCTGAGGGTGCAGAAAGATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS-3UTR CCA 90 bp | GCTCAAACCAAGTGGAGTTCCAGGCTGCTAACCTGTTCCCTAAGCTTGCCTGCCCCTTCTCGTGCACCATaGCCTCTACCTCACCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: AQTKWSSRLLTCSLSLPAPSRAP*PLPHPQ Trigger: CTGTGGGTGAGGTAGAGGCCATGGTGCACGAGAAGG...GGCAGGCAAGCTTAGGGAACAGGTTAGCAGCCTGGAACTCCACTTGGTTTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS-3UTR CCA 90 bp | GGAAATCCTATAAACACGAGCGGAAATCAATGGAGGCTGCTTAGCGGCCAGGGGTGGCCTCACCAGAACTaGCTGCTTCTAGCAGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GNPINTSGNQWRLLSGQGWPHQN*LLLAGA Trigger: AGCGCCTGCTAGAAGCAGCCAGTTCTGGTGAGGCCA...CCCCTGGCCGCTAAGCAGCCTCCATTGATTTCCGCTCGTGTTTATAGGATTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCTCATAACTGCCTCGGCTCCTCTCAAATCTTTCTGCACCCTCAGCTTGGGACTTCAGCCTTCTCGTaGACCATGGCCTCTACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPHNCLGSSQIFLHPQLGTSAFS*TMASTS Trigger: TGAGGTAGAGGCCATGGTGCACGAGAAGGCTGAAGT...CCCAAGCTGAGGGTGCAGAAAGATTTGAGAGGAGCCGAGGCAGTTATGAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS-3UTR CCA 90 bp | GCTCAAACCAAGTGGAGTTCCAGGCTGCTAACCTGTTCCCTAAGCTTGCCTGCCCGTTGTCGCAGCCAGTaGTCAGACAGCATAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AQTKWSSRLLTCSLSLPARCRSQ*SDSIRL Trigger: AAGCCTTATGCTGTCTGACCACTGGCTGCGACAACG...GGCAGGCAAGCTTAGGGAACAGGTTAGCAGCCTGGAACTCCACTTGGTTTGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS-3UTR TCA 90 bp | CCAAGTGGCAGTGAGATGAGAGGTGTGCATAGCTCAAACCAAGTGGAGTTCCAGCTCATTGTGAGGTCCTaGGACACCTGTTACTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSGSEMRGVHSSNQVEFQLIVRS*DTCYSR Trigger: CCTGGAGTAACAGGTGTCTCAGGACCTCACAATGAG...CTGGAACTCCACTTGGTTTGAGCTATGCACACCTCTCATCTCACTGCCACTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS-3UTR TCA 90 bp | CCAAGTGGCAGTGAGATGAGAGGTGTGCATAGCTCAAACCAAGTGGAGTTCCAGAAGTCTATTGTGAGCTaGGGCTCCTGTCCATGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSGSEMRGVHSSNQVEFQKSIVS*GSCPWA Trigger: AGCCCATGGACAGGAGCCTCAGCTCACAATAGACTT...CTGGAACTCCACTTGGTTTGAGCTATGCACACCTCTCATCTCACTGCCACTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS-3UTR TCA 90 bp | GGAAATCCTATAAACACGAGCGGAAATCAATGGAGGCTGCTTAGCGGCCAGGGGTCCACATACTCATTGTaGGGTCCTGAGACACCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GNPINTSGNQWRLLSGQGSTYSL*GPETPV Trigger: AACAGGTGTCTCAGGACCTCACAATGAGTATGTGGA...CCCCTGGCCGCTAAGCAGCCTCCATTGATTTCCGCTCGTGTTTATAGGATTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS-3UTR CCA 90 bp | TCTATGAAGCGTGAGAAGGGAAGAGAGGCCTGTTTTGACCTAGTTGAGAGAAAAATGCTGAGTCCCCTGTaGCCTCACCAGAACTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SMKREKGREACFDLVERKMLSPL*PHQNWL Trigger: CAGCCAGTTCTGGTGAGGCCACAGGGGACTCAGCAT...TTTTCTCTCAACTAGGTCAAAACAGGCCTCTCTTCCCTTCTCACGCTTCATAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR CAA 72 bp | CAGGGAACGAAGGTGTTAGCTGTGAAGTGGCATAATTaGAGTGATTCTCTGTTTTCATTGACAGGCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QGTKVLAVKWHN*SDSLFSLTGLD Trigger: ATCCAAGCCTGTCAATGAAAACAGAGAATCACTCAAATTATGCCACTTCACAGCTAACACCTTCGTTCCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS-3UTR TCA 90 bp | AAGTGGCATAATTTGAGTGATTCTCTGTTTTCATTGACAGGCTTGGATTCTGTCAATCCAAGTCTATTGTaGGCTGAGGCTCCTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KWHNLSDSLFSLTGLDSVNPSLL*AEAPVH Trigger: ATGGACAGGAGCCTCAGCTCACAATAGACTTGGATT...GACAGAATCCAAGCCTGTCAATGAAAACAGAGAATCACTCAAATTATGCCACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| 3UTR CAA 72 bp | CATAATTTGAGTGATTCTCTGTTTTCATTGACAGGCTaGGATTCTGTCAGCCTTTCTTCTCTGTGCGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: HNLSDSLFSLTG*DSVSLSSLCVT Trigger: GGTTACGCACAGAGAAGAAAGGCTGACAGAATCCAAGCCTGTCAATGAAAACAGAGAATCACTCAAATTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS GCA 90 bp | GTGTCTCGGAAGGTGACCCGGTGCTCCAGGGTGGCCCCCAACTCCTaGAGCCTTTCCTCCGTGTCAGGCCCTGGAGCGAACTTTCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSRKVTRCSRVAPNS*SLSSVSGPGANFRS Trigger: GGAGCGAAAGTTCGCTCCAGGGCCTGACACGGAGGAAAGGCTGCAGGAGTTGGGGGCCACCCTGGAGCACCGGGTCACCTTCCGAGACAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS TCA 90 bp | GTGCACCATGGCCTCTACCTCACCCACAGCATAGCCGAAGTCCGCTaGATCCAAGTCTATTGTGAGCTGAGGCTCCTGTCCATGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VHHGLYLTHSIAEVR*IQVYCELRLLSMGS Trigger: GGAGCCCATGGACAGGAGCCTCAGCTCACAATAGACTTGGATTCAGCGGACTTCGGCTATGCTGTGGGTGAGGTAGAGGCCATGGTGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS TCA 90 bp | CCTCACCCACAGCATAGCCGAAGTCCGCTGAATCCAAGTCTATTGTaGGCTGAGGCTCCTGTCCATGGGCTCCAGATAAGGCCAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PHPQHSRSPLNPSLL*AEAPVHGLQIRPAS Trigger: GGAAGCTGGCCTTATCTGGAGCCCATGGACAGGAGCCTCAGCTCACAATAGACTTGGATTCAGCGGACTTCGGCTATGCTGTGGGTGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTCAAATCTTTCTGCACCCTCAGCTTGGGACACAACCCTGAGGGCCACCAGTCCACTACCTTCTCGTaGTCGCAGCCAGTGGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PLKSFCTLSLGHNPEGHQSTTFS*SQPVVR Trigger: TCTGACCACTGGCTGCGACAACGAGAAGGTAGTGGA...CTGGTGGCCCTCAGGGTTGTGTCCCAAGCTGAGGGTGCAGAAAGATTTGAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS-3UTR CAA 90 bp | GCTCAAACCAAGTGGAGTTCCAGGCTGCTAACCTGTTCCCTAAGCTTGCCTGCCGTTACTCCAGGACATTaGAGCTCCCATCCACTACCT | + |
|
Preference number: 5 (lower is better) Translates to: AQTKWSSRLLTCSLSLPAVTPGH*SSHPLP Trigger: AGGTAGTGGATGGGAGCTCAAATGTCCTGGAGTAAC...GGCAGGCAAGCTTAGGGAACAGGTTAGCAGCCTGGAACTCCACTTGGTTTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS TCA 90 bp | CATACTCATTGTGAGGTCCTGAGACACCTGTTACTCCAGGACATTTaGGCTCCCATCCACTACCTTCTCGTTGTCGCAGCCAGTGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: HTHCEVLRHLLLQDI*APIHYLLVVAASGQ Trigger: CTGACCACTGGCTGCGACAACGAGAAGGTAGTGGATGGGAGCTCAAATGTCCTGGAGTAACAGGTGTCTCAGGACCTCACAATGAGTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS TCA 90 bp | ACCCGAGCAGTTCAAAGAGCTGGGCCACAATCGCAGCTTCCGATGTaGCTTCCACATACTCATTGTGAGGTCCTGAGACACCTGTTACTC | + |
|
Preference number: 5 (lower is better) Translates to: TRAVQRAGPQSQLPM*LPHTHCEVLRHLLL Trigger: GAGTAACAGGTGTCTCAGGACCTCACAATGAGTATGTGGAAGTCACATCGGAAGCTGCGATTGTGGCCCAGCTCTTTGAACTGCTCGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS TCA 90 bp | TGGGCCACAATCGCAGCTTCCGATGTGACTTCCACATACTCATTGTaGGGTCCTGAGACACCTGTTACTCCAGGACATTTGAGCTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: WATIAASDVTSTYSL*GPETPVTPGHLSSH Trigger: ATGGGAGCTCAAATGTCCTGGAGTAACAGGTGTCTCAGGACCTCACAATGAGTATGTGGAAGTCACATCGGAAGCTGCGATTGTGGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS TCA 90 bp | AATCGCAGCTTCCGATGTGACTTCCACATACTCATTGTGAGGTCCTaGGACACCTGTTACTCCAGGACATTTGAGCTCCCATCCACTACC | + |
|
Preference number: 5 (lower is better) Translates to: NRSFRCDFHILIVRS*DTCYSRTFELPSTT Trigger: GGTAGTGGATGGGAGCTCAAATGTCCTGGAGTAACAGGTGTCTCAGGACCTCACAATGAGTATGTGGAAGTCACATCGGAAGCTGCGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS-3UTR CAA 90 bp | AAGTGGCATAATTTGAGTGATTCTCTGTTTTCATTGACAGGCTTGGATTCTGTCAGGTATACCATGAGCTaGGCTGGTGCCTCCTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KWHNLSDSLFSLTGLDSVRYTMS*AGASSC Trigger: ACAGGAGGAGGCACCAGCCAAGCTCATGGTATACCT...GACAGAATCCAAGCCTGTCAATGAAAACAGAGAATCACTCAAATTATGCCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS GCA 72 bp | AAGGTGACCCGGTGCTCCAGGGTGGCCCCCAACTCCTaGAGCCTTTCCTCCGTGTCAGGCCCTGGAGCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: KVTRCSRVAPNS*SLSSVSGPGAN Trigger: GTTCGCTCCAGGGCCTGACACGGAGGAAAGGCTGCAGGAGTTGGGGGCCACCCTGGAGCACCGGGTCACCTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS CAA 72 bp | TCCAGAGGCCTGAAGCGCTGTAGGTATACCATGAGCTaGGCTGGTGCCTCCTCCTGTGCTGGCACTCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRGLKRCRYTMS*AGASSCAGTPS Trigger: GCTTGGAGTGCCAGCACAGGAGGAGGCACCAGCCAAGCTCATGGTATACCTACAGCGCTTCAGGCCTCTGGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS TCA 72 bp | GGCCTCTACCTCACCCACAGCATAGCCGAAGTCCGCTaGATCCAAGTCTATTGTGAGCTGAGGCTCCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GLYLTHSIAEVR*IQVYCELRLLS Trigger: GGACAGGAGCCTCAGCTCACAATAGACTTGGATTCAGCGGACTTCGGCTATGCTGTGGGTGAGGTAGAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS TCA 72 bp | TGTGAGGTCCTGAGACACCTGTTACTCCAGGACATTTaGGCTCCCATCCACTACCTTCTCGTTGTCGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: CEVLRHLLLQDI*APIHYLLVVAA Trigger: GGCTGCGACAACGAGAAGGTAGTGGATGGGAGCTCAAATGTCCTGGAGTAACAGGTGTCTCAGGACCTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS TCA 72 bp | CAGCATAGCCGAAGTCCGCTGAATCCAAGTCTATTGTaGGCTGAGGCTCCTGTCCATGGGCTCCAGATAAGG | + |
|
Preference number: 6 (lower is better) Translates to: QHSRSPLNPSLL*AEAPVHGLQIR Trigger: CCTTATCTGGAGCCCATGGACAGGAGCCTCAGCTCACAATAGACTTGGATTCAGCGGACTTCGGCTATGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS CCA 72 bp | GTATACCATGAGCTTGGCTGGTGCCTCCTCCTGTGCTaGCACTCCAAGCATGCTACTGACGGTGATGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: VYHELGWCLLLC*HSKHATDGDDL Trigger: AAGATCATCACCGTCAGTAGCATGCTTGGAGTGCCAGCACAGGAGGAGGCACCAGCCAAGCTCATGGTATAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS TCA 72 bp | GTTCAAAGAGCTGGGCCACAATCGCAGCTTCCGATGTaGCTTCCACATACTCATTGTGAGGTCCTGAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: VQRAGPQSQLPM*LPHTHCEVLRH Trigger: GTGTCTCAGGACCTCACAATGAGTATGTGGAAGTCACATCGGAAGCTGCGATTGTGGCCCAGCTCTTTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS CCA 72 bp | AGCTCCCATCCACTACCTTCTCGTTGTCGCAGCCAGTaGTCAGACAGCATAAGGCTTAACTCAGAGGTATCA | + |
|
Preference number: 6 (lower is better) Translates to: SSHPLPSRCRSQ*SDSIRLNSEVS Trigger: TGATACCTCTGAGTTAAGCCTTATGCTGTCTGACCACTGGCTGCGACAACGAGAAGGTAGTGGATGGGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS TCA 72 bp | TTCCGATGTGACTTCCACATACTCATTGTGAGGTCCTaGGACACCTGTTACTCCAGGACATTTGAGCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: FRCDFHILIVRS*DTCYSRTFELP Trigger: TGGGAGCTCAAATGTCCTGGAGTAACAGGTGTCTCAGGACCTCACAATGAGTATGTGGAAGTCACATCGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||
| CDS TCA 72 bp | ATCGCAGCTTCCGATGTGACTTCCACATACTCATTGTaGGGTCCTGAGACACCTGTTACTCCAGGACATTTG | + |
|
Preference number: 6 (lower is better) Translates to: IAASDVTSTYSL*GPETPVTPGHL Trigger: CAAATGTCCTGGAGTAACAGGTGTCTCAGGACCTCACAATGAGTATGTGGAAGTCACATCGGAAGCTGCGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050575.9 |
||