RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for THSD7B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000042581

Ensembl transcript IDs: ENSMUST00000040311.14, ENSMUST00000073527.13, ENSMUST00000152305.3

Found 481 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAGAGGGAAGCCAGCCTAGTGCCCAGGCTAGCCTTTCTTCAGCACTaGCTTCCTGGTATGCTATCCTGTGCTACCCTCCATCAGGGTCCT +
Preference number: 1 (lower is better)
Translates to: EREASLVPRLAFLQH*LPGMLSCATLHQGP
Trigger: AGGACCCTGATGGAGGGTAGCACAGGATAGCATACCAGGAAGGCAGTGCTGAAGAAAGGCTAGCCTGGGCACTAGGCTGGCTTCCCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
3UTR GCA 90 bp TGTCTCAAGTTCTCAGGGCTTTCAGTTCACAGTCACCTGGCCACATaGATGTGGGAAACCATCAACACAGTGAAAGAGAAGGCTCTTTAT +
Preference number: 1 (lower is better)
Translates to: CLKFSGLSVHSHLAT*MWETINTVKEKALY
Trigger: ATAAAGAGCCTTCTCTTTCACTGTGTTGATGGTTTCCCACATGCATGTGGCCAGGTGACTGTGAACTGAAAGCCCTGAGAACTTGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
3UTR TCA 90 bp GTAAATGCCTCGATTGGACTTTCCTGTGGATTGTCAATATGCGGCTaGGGATCAAGTTTACTCAAGTCTGTGCGAAATCCTTCAGGTTCT +
Preference number: 1 (lower is better)
Translates to: VNASIGLSCGLSICG*GSSLLKSVRNPSGS
Trigger: AGAACCTGAAGGATTTCGCACAGACTTGAGTAAACTTGATCCTCAGCCGCATATTGACAATCCACAGGAAAGTCCAATCGAGGCATTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
3UTR CCA 90 bp GTCAGACTCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTaGATTGTCAATATGCGGCTGAGGATCAAGTTTACTCAAGTCTGT +
Preference number: 1 (lower is better)
Translates to: VRLAIYSKCLDWTFL*IVNMRLRIKFTQVC
Trigger: ACAGACTTGAGTAAACTTGATCCTCAGCCGCATATTGACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
3UTR GCA 90 bp GGTATATATCTCAGTTCTGTGACCAAATACTTGACAGAAATAGCTTaGAGAAGGGAATATTTTGTCTCAAGTTCTCAGGGCTTTCAGTTC +
Preference number: 1 (lower is better)
Translates to: GIYLSSVTKYLTEIA*RREYFVSSSQGFQF
Trigger: GAACTGAAAGCCCTGAGAACTTGAGACAAAATATTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGTCACAGAACTGAGATATATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
3UTR-3UTR TCA 90 bp TTATCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACGACTCCATGTCCAAATaGAGTTGGGGCACTATTACT +
Preference number: 2 (lower is better)
Translates to: LSNSLPHSPVHSPNFLANDSMSK*SWGTIT
Trigger: AGTAATAGTGCCCCAACTTCATTTGGACATGGAGTC...GTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
3UTR-3UTR TCA 90 bp TCTCAGTTCTGTGACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAATATTTAAGGCTCTTTATAAGTaGTGGCTATTAGCAAAGAGG +
Preference number: 2 (lower is better)
Translates to: SQFCDQILDRNSLQKGIFKALYK*WLLAKR
Trigger: CCTCTTTGCTAATAGCCATCACTTATAAAGAGCCTT...AAATATTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGTCACAGAACTGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
3UTR-3UTR CCA 90 bp TTATCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACAGTAAATGCCTCGATTaGACTTTCCTGTGGATTGTC +
Preference number: 2 (lower is better)
Translates to: LSNSLPHSPVHSPNFLANSKCLD*TFLWIV
Trigger: GACAATCCACAGGAAAGTCCAATCGAGGCATTTACT...GTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
3UTR CAA 90 bp TATCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTaGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACT +
Preference number: 2 (lower is better)
Translates to: YQIVYLILQYIHLIS*LTLCTFHLETTQFT
Trigger: AGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
3UTR GCA 72 bp GCCAGCCTAGTGCCCAGGCTAGCCTTTCTTCAGCACTaGCTTCCTGGTATGCTATCCTGTGCTACCCTCCAT +
Preference number: 3 (lower is better)
Translates to: ASLVPRLAFLQH*LPGMLSCATLH
Trigger: ATGGAGGGTAGCACAGGATAGCATACCAGGAAGGCAGTGCTGAAGAAAGGCTAGCCTGGGCACTAGGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
3UTR GCA 72 bp CTTTCTTCAGCACTGCCTTCCTGGTATGCTATCCTGTaGTACCCTCCATCAGGGTCCTCATGCACACACACC +
Preference number: 3 (lower is better)
Translates to: LSSALPSWYAIL*YPPSGSSCTHT
Trigger: GGTGTGTGTGCATGAGGACCCTGATGGAGGGTAGCACAGGATAGCATACCAGGAAGGCAGTGCTGAAGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
3UTR CCA 72 bp GGGCTTTCAGTTCACAGTCACCTGGCCACATGCATGTaGGAAACCATCAACACAGTGAAAGAGAAGGCTCTT +
Preference number: 3 (lower is better)
Translates to: GLSVHSHLATCM*ETINTVKEKAL
Trigger: AAGAGCCTTCTCTTTCACTGTGTTGATGGTTTCCCACATGCATGTGGCCAGGTGACTGTGAACTGAAAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
3UTR GCA 72 bp TTCTCAGGGCTTTCAGTTCACAGTCACCTGGCCACATaGATGTGGGAAACCATCAACACAGTGAAAGAGAAG +
Preference number: 3 (lower is better)
Translates to: FSGLSVHSHLAT*MWETINTVKEK
Trigger: CTTCTCTTTCACTGTGTTGATGGTTTCCCACATGCATGTGGCCAGGTGACTGTGAACTGAAAGCCCTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
3UTR CCA 72 bp AGTGTCAGACTCGCCATTTACAGTAAATGCCTCGATTaGACTTTCCTGTGGATTGTCAATATGCGGCTGAGG +
Preference number: 3 (lower is better)
Translates to: SVRLAIYSKCLD*TFLWIVNMRLR
Trigger: CCTCAGCCGCATATTGACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
3UTR TCA 72 bp ACCATCAACACAGTGAAAGAGAAGGCTCTTTATAAGTaGTGGCTATTAGCAAAGAGGAGAGGGAAGCCAGCC +
Preference number: 3 (lower is better)
Translates to: TINTVKEKALYK*WLLAKRRGKPA
Trigger: GGCTGGCTTCCCTCTCCTCTTTGCTAATAGCCATCACTTATAAAGAGCCTTCTCTTTCACTGTGTTGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
3UTR TCA 72 bp TCGATTGGACTTTCCTGTGGATTGTCAATATGCGGCTaGGGATCAAGTTTACTCAAGTCTGTGCGAAATCCT +
Preference number: 3 (lower is better)
Translates to: SIGLSCGLSICG*GSSLLKSVRNP
Trigger: AGGATTTCGCACAGACTTGAGTAAACTTGATCCTCAGCCGCATATTGACAATCCACAGGAAAGTCCAATCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
3UTR-3UTR CAA 90 bp TACAGTGTCAGACTCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGCATTTAAGGCAGCAGTaGATGTCTACATTTGGATTC +
Preference number: 3 (lower is better)
Translates to: YSVRLAIYSKCLDWTFLWHLRQQ*MSTFGF
Trigger: GAATCCAAATGTAGACATCAACTGCTGCCTTAAATG...CCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGACACTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
3UTR CCA 72 bp GCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTaGATTGTCAATATGCGGCTGAGGATCAAGTTTACT +
Preference number: 3 (lower is better)
Translates to: AIYSKCLDWTFL*IVNMRLRIKFT
Trigger: AGTAAACTTGATCCTCAGCCGCATATTGACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
3UTR TCA 72 bp ATGGCAGACCCAGTAGTTCTTGACTCCATGTCCAAATaGAGTTGGGGCACTATTACTTTTGTCATATTCGTA +
Preference number: 3 (lower is better)
Translates to: MADPVVLDSMSK*SWGTITFVIFV
Trigger: TACGAATATGACAAAAGTAATAGTGCCCCAACTTCATTTGGACATGGAGTCAAGAACTACTGGGTCTGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
3UTR CCA 72 bp CATAGCACACAATGGCACCTTCTTACTTCCAACATCTaGGATTACAAAGGATTAGCTCATAAAATGGTCTCA +
Preference number: 3 (lower is better)
Translates to: HSTQWHLLTSNI*DYKGLAHKMVS
Trigger: TGAGACCATTTTATGAGCTAATCCTTTGTAATCCCAGATGTTGGAAGTAAGAAGGTGCCATTGTGTGCTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
3UTR-3UTR CAA 90 bp TATAAAGACAAATCCATAGCACACAATGGCACCTTCTTACTTCCAACATCTGGGATTCACCTAATTTCCTaGCTAACACTCTGCACATTT +
Preference number: 3 (lower is better)
Translates to: YKDKSIAHNGTFLLPTSGIHLIS*LTLCTF
Trigger: AAATGTGCAGAGTGTTAGCAAGGAAATTAGGTGAAT...CCCAGATGTTGGAAGTAAGAAGGTGCCATTGTGTGCTATGGATTTGTCTTTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
3UTR-3UTR CAA 90 bp TCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACACTTCTAGAAAACTCATGTaGAAGTATGGGAATAAGGAC +
Preference number: 3 (lower is better)
Translates to: SNSLPHSPVHSPNFLANTSRKLM*KYGNKD
Trigger: GTCCTTATTCCCATACTTCAACATGAGTTTTCTAGA...AGTGTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp GGTATGCTATCCTGTGCTACCCTCCATCAGGGTCCTCATGCACACACACCCAGAGTGTCTGGGCACTCTTaGCCCCCATTGGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: GMLSCATLHQGPHAHTPRVSGHS*PPLAAS
Trigger: GGAAGCAGCCAATGGGGGTCAAGAGTGCCCAGACAC...TCTGGGTGTGTGTGCATGAGGACCCTGATGGAGGGTAGCACAGGATAGCATACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp CCTTCCTGGTATGCTATCCTGTGCTACCCTCCATCAGGGTCCTCATGCACACACTCCCACATGCCTCACTaGTGCCTGTTCTCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: PSWYAILCYPPSGSSCTHSHMPH*CLFSPA
Trigger: GGCAGGGGAGAACAGGCACCAGTGAGGCATGTGGGA...GTGTGTGCATGAGGACCCTGATGGAGGGTAGCACAGGATAGCATACCAGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp CTTCCTGGTATGCTATCCTGTGCTACCCTCCATCAGGGTCCTCATGCACACACACATACAGCACGACTTTaGGCTCCGCCTGGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: LPGMLSCATLHQGPHAHTHTARL*APPGPQ
Trigger: CTGCGGACCAGGCGGAGCCCAAAGTCGTGCTGTATG...TGTGTGTGCATGAGGACCCTGATGGAGGGTAGCACAGGATAGCATACCAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp CTGTGGATTGTCAATATGCGGCTGAGGATCAAGTTTACTCAAGTCTGTGCGAAACCACAGCCCGAGGCCTaGGCTCACCTTGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LWIVNMRLRIKFTQVCAKPQPEA*AHLGPQ
Trigger: CTGGGGCCCAAGGTGAGCCCAGGCCTCGGGCTGTGG...TTTCGCACAGACTTGAGTAAACTTGATCCTCAGCCGCATATTGACAATCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp GGTATGCTATCCTGTGCTACCCTCCATCAGGGTCCTCATGCACACACACCCAGAACATGGGCCCCAGGTTaGCCAGGAAGATACTATGCA +
Preference number: 4 (lower is better)
Translates to: GMLSCATLHQGPHAHTPRTWAPG*PGRYYA
Trigger: TGCATAGTATCTTCCTGGTCAACCTGGGGCCCATGT...TCTGGGTGTGTGTGCATGAGGACCCTGATGGAGGGTAGCACAGGATAGCATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp GGTATGCTATCCTGTGCTACCCTCCATCAGGGTCCTCATGCACACACACCCAGAGAGGCAAGCCAGCGATaGCACATTGGATCCTCACAA +
Preference number: 4 (lower is better)
Translates to: GMLSCATLHQGPHAHTPREASQR*HIGSSQ
Trigger: TTGTGAGGATCCAATGTGTCATCGCTGGCTTGCCTC...TCTGGGTGTGTGTGCATGAGGACCCTGATGGAGGGTAGCACAGGATAGCATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp TTCCTGGTATGCTATCCTGTGCTACCCTCCATCAGGGTCCTCATGCACACACACTGGACAGAGACCCCCTaGTACTTCTTCTCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: FLVCYPVLPSIRVLMHTHWTETP*YFFSSL
Trigger: GAGCGAGGAGAAGAAGTATCAGGGGGTCTCTGTCCA...GTGTGTGTGCATGAGGACCCTGATGGAGGGTAGCACAGGATAGCATACCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR GCA 90 bp TCCTGTGCTACCCTCCATCAGGGTCCTCATGCACACACACCCAGAAGCAAGCTGCCTCCAATAGCAATATaGTTCACGTTCCGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SCATLHQGPHAHTPRSKLPPIAI*FTFRLL
Trigger: CAGGAGCCGGAACGTGAAGCATATTGCTATTGGAGG...CAGCTTGCTTCTGGGTGTGTGTGCATGAGGACCCTGATGGAGGGTAGCACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp TCCTGTGCTACCCTCCATCAGGGTCCTCATGCACACACACCCAGAAGCAAGCTGAGGCCACATTTCCCATaGTCAGCAATACAGATCCCT +
Preference number: 4 (lower is better)
Translates to: SCATLHQGPHAHTPRSKLRPHFP*SAIQIP
Trigger: AGGGATCTGTATTGCTGATCATGGGAAATGTGGCCT...CAGCTTGCTTCTGGGTGTGTGTGCATGAGGACCCTGATGGAGGGTAGCACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp GAAGCCAGCCTAGTGCCCAGGCTAGCCTTTCTTCAGCACTGCCTTCCTGGTATGCCAGCGATGACACATTaGATCCTCACAAGGTACAGA +
Preference number: 4 (lower is better)
Translates to: EASLVPRLAFLQHCLPGMPAMTH*ILTRYR
Trigger: TCTGTACCTTGTGAGGATCCAATGTGTCATCGCTGG...CATACCAGGAAGGCAGTGCTGAAGAAAGGCTAGCCTGGGCACTAGGCTGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp AGTTCACAGTCACCTGGCCACATGCATGTGGGAAACCATCAACACAGTGAAAGAGCAGGGCCGTGGGCATaGTGTCCACTCACTGAAAGC +
Preference number: 4 (lower is better)
Translates to: SSQSPGHMHVGNHQHSERAGPWA*CPLTES
Trigger: GCTTTCAGTGAGTGGACACCATGCCCACGGCCCTGC...TCTTTCACTGTGTTGATGGTTTCCCACATGCATGTGGCCAGGTGACTGTGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp CCTTCCTGGTATGCTATCCTGTGCTACCCTCCATCAGGGTCCTCATGCACACACACACCATGGTTCTATTaGGCTTCTGAAGACAGCGCA +
Preference number: 4 (lower is better)
Translates to: PSWYAILCYPPSGSSCTHTPWFY*ASEDSA
Trigger: TGCGCTGTCTTCAGAAGCTCAATAGAACCATGGTGT...GTGTGTGCATGAGGACCCTGATGGAGGGTAGCACAGGATAGCATACCAGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp CTTCCTGGTATGCTATCCTGTGCTACCCTCCATCAGGGTCCTCATGCACACACAATGGTGTCCACTCACTaGAAGCAGTCACAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: LPGMLSCATLHQGPHAHTMVSTH*KQSQGS
Trigger: ACTGCCTTGTGACTGCTTTCAGTGAGTGGACACCAT...TGTGTGTGCATGAGGACCCTGATGGAGGGTAGCACAGGATAGCATACCAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp GTCAGACTCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGATTGTCGTGTCTGGGCACTCTTaGCCCCCATTGGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: VRLAIYSKCLDWTFLWIVVSGHS*PPLAAS
Trigger: GGAAGCAGCCAATGGGGGTCAAGAGTGCCCAGACAC...GACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp CCTTCCTGGTATGCTATCCTGTGCTACCCTCCATCAGGGTCCTCATGCACACACGCCACACGAGTTCTATaGTGCAGTTTCTTCCCACAT +
Preference number: 4 (lower is better)
Translates to: PSWYAILCYPPSGSSCTHATRVL*CSFFPH
Trigger: ATGTGGGAAGAAACTGCAGCATAGAACTCGTGTGGC...GTGTGTGCATGAGGACCCTGATGGAGGGTAGCACAGGATAGCATACCAGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR GCA 90 bp CCTTCCTGGTATGCTATCCTGTGCTACCCTCCATCAGGGTCCTCATGCACACACACCAGGAAGATACTATaGAGTCCATCGAGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: PSWYAILCYPPSGSSCTHTRKIL*SPSSKG
Trigger: TCCCTTGCTCGATGGACTGCATAGTATCTTCCTGGT...GTGTGTGCATGAGGACCCTGATGGAGGGTAGCACAGGATAGCATACCAGGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR GCA 90 bp GTCAGACTCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGATTGTCAGGCAGGGCCGCACCTaGGAGTCTTCCCCACAAGTT +
Preference number: 4 (lower is better)
Translates to: VRLAIYSKCLDWTFLWIVRQGRT*ESSPQV
Trigger: AACTTGTGGGGAAGACTCGCAGGTGCGGCCCTGCCT...GACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp ATGCTATCCTGTGCTACCCTCCATCAGGGTCCTCATGCACACACACCCAGAAGCTTATTTGAACAGGACTaGGAGCAGGATGACCACACT +
Preference number: 4 (lower is better)
Translates to: MLSCATLHQGPHAHTPRSLFEQD*EQDDHT
Trigger: AGTGTGGTCATCCTGCTCTCAGTCCTGTTCAAATAA...GCTTCTGGGTGTGTGTGCATGAGGACCCTGATGGAGGGTAGCACAGGATAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp CCATCAGGGTCCTCATGCACACACACCCAGAAGCAAGCTGGATTAGCCCCCAACATTACTTGTCCCACATaGCTCTTGATACAGAAGACC +
Preference number: 4 (lower is better)
Translates to: PSGSSCTHTQKQAGLAPNITCPT*LLIQKT
Trigger: GGTCTTCTGTATCAAGAGTCATGTGGGACAAGTAAT...GTTGGGGGCTAATCCAGCTTGCTTCTGGGTGTGTGTGCATGAGGACCCTGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp TCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACACTGCAGCAGGGCGTGCCTaGGGGGAGCAGCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: SNSLPHSPVHSPNFLANTAAGRA*GEQPPV
Trigger: CACAGGTGGCTGCTCCCCTCAGGCACGCCCTGCTGC...AGTGTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp GGTATGCTATCCTGTGCTACCCTCCATCAGGGTCCTCATGCACACACACCCAGAACTGATTGTCCTTCCTaGCTTCCAAATGAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: GMLSCATLHQGPHAHTPRTDCPS*LPNELL
Trigger: AAGCAGCTCATTTGGAAGGCAGGAAGGACAATCAGT...TCTGGGTGTGTGTGCATGAGGACCCTGATGGAGGGTAGCACAGGATAGCATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR GCA 90 bp ATATTTTGTCTCAAGTTCTCAGGGCTTTCAGTTCACAGTCACCTGGCCACATGCGAGACAGCTCTTGTCTaGAGCCCCTTCCCACATGCC +
Preference number: 4 (lower is better)
Translates to: IFCLKFSGLSVHSHLATCETALV*SPFPHA
Trigger: GGCATGTGGGAAGGGGCTGCAGACAAGAGCTGTCTC...GCATGTGGCCAGGTGACTGTGAACTGAAAGCCCTGAGAACTTGAGACAAAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR GCA 90 bp CCTTCCTGGTATGCTATCCTGTGCTACCCTCCATCAGGGTCCTCATGCACACACTGCCTTCTGGTAGAATaGAAGCTGACCAGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: PSWYAILCYPPSGSSCTHCLLVE*KLTSFH
Trigger: ATGGAAACTGGTCAGCTTGCATTCTACCAGAAGGCA...GTGTGTGCATGAGGACCCTGATGGAGGGTAGCACAGGATAGCATACCAGGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp GGTATGCTATCCTGTGCTACCCTCCATCAGGGTCCTCATGCACACACACCCAGAGACTCCATGAGTACATaGCGCTGTCTCATTCTAAAG +
Preference number: 4 (lower is better)
Translates to: GMLSCATLHQGPHAHTPRDSMST*RCLILK
Trigger: CTTTAGAATGAGACAGCGCCATGTACTCATGGAGTC...TCTGGGTGTGTGTGCATGAGGACCCTGATGGAGGGTAGCACAGGATAGCATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp TTTGCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTCAGTTCTGTTGGCTGGCAGGGCCGTaGGCATGGTGTCCACTCACT +
Preference number: 4 (lower is better)
Translates to: FAHCKREAEGVRYISQFCWLAGP*AWCPLT
Trigger: AGTGAGTGGACACCATGCCCACGGCCCTGCCAGCCA...ACAGAACTGAGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp GCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTCAGTTCTGTGACAGGCTCTGGACTCCGTaGGATTTGGACACTGCAGAC +
Preference number: 4 (lower is better)
Translates to: AHCKREAEGVRYISQFCDRLWTP*DLDTAD
Trigger: GTCTGCAGTGTCCAAATCTCACGGAGTCCAGAGCCT...GTCACAGAACTGAGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp TCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGATTGTCAATATGCGGGACATTGCAAAGCTaGGAGGCTGAGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SPFTVNASIGLSCGLSICGTLQS*EAEGAG
Trigger: ACCTGCCCCCTCAGCCTCTCAGCTTTGCAATGTCCC...GCATATTGACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp AAGCATATTAGCATTTGCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATACAGATTCTGCCAGATaGGGGCAGCGCCCCATGGGC +
Preference number: 4 (lower is better)
Translates to: KHISICTLQKRSRRGQVYTDSAR*GQRPMG
Trigger: GCCCATGGGGCGCTGCCCTCATCTGGCAGAATCTGT...ATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGCAAATGCTAATATGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp GCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTCAGTTCTGTGACGGACTGAGAGCAGGATaGCCACACTGTCCACTCACT +
Preference number: 4 (lower is better)
Translates to: AHCKREAEGVRYISQFCDGLRAG*PHCPLT
Trigger: AGTGAGTGGACAGTGTGGTCATCCTGCTCTCAGTCC...GTCACAGAACTGAGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp GTCAGACTCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGATTGTCAGGGTTTCTGCTGGGTaGGTTCTGTGGGGCATTGTC +
Preference number: 4 (lower is better)
Translates to: VRLAIYSKCLDWTFLWIVRVSAG*VLWGIV
Trigger: GACAATGCCCCACAGAACTCACCCAGCAGAAACCCT...GACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp GTCAGACTCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGATTGTCGACATTAAGGCCATCTaGGCGCTGGCACCACACAGT +
Preference number: 4 (lower is better)
Translates to: VRLAIYSKCLDWTFLWIVDIKAI*ALAPHS
Trigger: ACTGTGTGGTGCCAGCGCTCAGATGGCCTTAATGTC...GACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp ATTAGCATTTGCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTCATGGTCCGCAGTCACCTaGACACCTTCCCCAGGGACC +
Preference number: 4 (lower is better)
Translates to: ISICTLQKRSRRGQVYISWSAVT*TPSPGT
Trigger: GGTCCCTGGGGAAGGTGTGCAGGTGACTGCGGACCA...TGAGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGCAAATGCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR GCA 90 bp TCCATCAGGGTCCTCATGCACACACACCCAGAAGCAAGCTGGATTAGCCCCCAAATTCCCCTTCAGCAATaGAGGTCTCTTTCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: SIRVLMHTHPEASWISPQIPLQQ*RSLSQE
Trigger: TTCTTGAGAAAGAGACCTGCATTGCTGAAGGGGAAT...TTGGGGGCTAATCCAGCTTGCTTCTGGGTGTGTGTGCATGAGGACCCTGATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR GCA 90 bp GCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTCAGTTCTGTGACTCCCACAAGATGAGCTaGAAGAACCCCAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: AHCKREAEGVRYISQFCDSHKMS*KNPSWT
Trigger: GGTCCAGCTGGGGTTCTTGCAGCTCATCTTGTGGGA...GTCACAGAACTGAGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR GCA 90 bp GTCAGACTCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGATTGTCTCCCACAAGATGAGCTaGAAGAACCCCAGCTGGACC +
Preference number: 4 (lower is better)
Translates to: VRLAIYSKCLDWTFLWIVSHKMS*KNPSWT
Trigger: GGTCCAGCTGGGGTTCTTGCAGCTCATCTTGTGGGA...GACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp GCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTCAGTTCTGTGACTCGGAAACCTCCCACTaGAACAGGTCACTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: AHCKREAEGVRYISQFCDSETSH*NRSLCQ
Trigger: CTGGCACAGTGACCTGTTCCAGTGGGAGGTTTCCGA...GTCACAGAACTGAGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp ACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAATATTTTGTCTCAAGTTCTCCACAGCCCGAGGCCTaGGCTCACCTTGGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: TKYLTEIACRREYFVSSSPQPEA*AHLGPQ
Trigger: CTGGGGCCCAAGGTGAGCCCAGGCCTCGGGCTGTGG...AGAACTTGAGACAAAATATTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp GCATTTGCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTCAGTTCGGGGCAGGTGGACCATaGGGAGAACTCAGATACCAC +
Preference number: 4 (lower is better)
Translates to: AFAHCKREAEGVRYISQFGAGGP*GELRYH
Trigger: GTGGTATCTGAGTTCTCCCCATGGTCCACCTGCCCC...GAACTGAGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGCAAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp CATTTGCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTCAGTTCTGTTGCTGGTAGGCTCTaGGCACAGTACACCTCCCGG +
Preference number: 4 (lower is better)
Translates to: HLHTAKEKQKGSGIYLSSVAGRL*AQYTSR
Trigger: CCGGGAGGTGTACTGTGCCCAGAGCCTACCAGCAAC...AGAACTGAGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp GAAGCCAGCCTAGTGCCCAGGCTAGCCTTTCTTCAGCACTGCCTTCCTGGTATGACTCTGGACATCTTTTaGTCATTACTTGTCCCACAT +
Preference number: 4 (lower is better)
Translates to: EASLVPRLAFLQHCLPGMTLDIF*SLLVPH
Trigger: ATGTGGGACAAGTAATGACCAAAAGATGTCCAGAGT...CATACCAGGAAGGCAGTGCTGAAGAAAGGCTAGCCTGGGCACTAGGCTGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp GTCAGACTCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGATTGTCACATGGGCCCCAGGTTaGCCAGGAAGATACTATGCA +
Preference number: 4 (lower is better)
Translates to: VRLAIYSKCLDWTFLWIVTWAPG*PGRYYA
Trigger: TGCATAGTATCTTCCTGGTCAACCTGGGGCCCATGT...GACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp TGGCAACCCATTCTCTCTGTGTTCATGAAAATAGGCAATCCAATTTGCAAGTTTACAGATTCTGCCAGATaGGGGCAGCGCCCCATGGGC +
Preference number: 4 (lower is better)
Translates to: WQPILSVFMKIGNPICKFTDSAR*GQRPMG
Trigger: GCCCATGGGGCGCTGCCCTCATCTGGCAGAATCTGT...AAACTTGCAAATTGGATTGCCTATTTTCATGAACACAGAGAGAATGGGTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp CTGTGGATTGTCAATATGCGGCTGAGGATCAAGTTTACTCAAGTCTGTGCGAAATGGACAGAGACCCCCTaGTACTTCTTCTCCTCGCTC +
Preference number: 4 (lower is better)
Translates to: LWIVNMRLRIKFTQVCAKWTETP*YFFSSL
Trigger: GAGCGAGGAGAAGAAGTATCAGGGGGTCTCTGTCCA...TTTCGCACAGACTTGAGTAAACTTGATCCTCAGCCGCATATTGACAATCCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp GTCAGACTCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGATTGTCTTAGCTGCCGCCTCCTaGTCTGAGTTGCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: VRLAIYSKCLDWTFLWIVLAAAS*SELLHS
Trigger: ACTGTGAAGCAACTCAGATCAGGAGGCGGCAGCTAA...GACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp TACAGTGTCAGACTCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGCCATGTTGTCCATCCTaGGAGCTGACAGTTGACCAC +
Preference number: 4 (lower is better)
Translates to: YSVRLAIYSKCLDWTFLWPCCPS*ELTVDH
Trigger: GTGGTCAACTGTCAGCTCTCAGGATGGACAACATGG...CCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGACACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp CTGTGGATTGTCAATATGCGGCTGAGGATCAAGTTTACTCAAGTCTGTGCGAAACTACACAGGAGAAGCTaGGCACCTGGACTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LWIVNMRLRIKFTQVCAKLHRRS*APGLLL
Trigger: GAGAAGGAGTCCAGGTGCGCAGCTTCTCCTGTGTAG...TTTCGCACAGACTTGAGTAAACTTGATCCTCAGCCGCATATTGACAATCCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp TACAGTGTCAGACTCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGAGCCAGGCACCTTCATaGAGTAATCCAGGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: YSVRLAIYSKCLDWTFLWSQAPS*SNPGSH
Trigger: GTGGCTTCCTGGATTACTGCATGAAGGTGCCTGGCT...CCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGACACTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp TACAGTGTCAGACTCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGGGAACAGGGGCTCCATaGAGACCATTCAGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: YSVRLAIYSKCLDWTFLWGTGAP*RPFRSL
Trigger: GAGACTTCTGAATGGTCTCCATGGAGCCCCTGTTCC...CCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGACACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp CTGGCCACATGCATGTGGGAAACCATCAACACAGTGAAAGAGAAGGCTCTTTATATCCAGTTTGGGACATaGCCGACCTCCACTGTAAGG +
Preference number: 4 (lower is better)
Translates to: LATCMWETINTVKEKALYIQFGT*PTSTVR
Trigger: CCTTACAGTGGAGGTCGGCCATGTCCCAAACTGGAT...ATAAAGAGCCTTCTCTTTCACTGTGTTGATGGTTTCCCACATGCATGTGGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp GTCAGACTCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGATTGTCATGGTGTCCACTCACTaGAAGCAGTCACAAGGCAGT +
Preference number: 4 (lower is better)
Translates to: VRLAIYSKCLDWTFLWIVMVSTH*KQSQGS
Trigger: ACTGCCTTGTGACTGCTTTCAGTGAGTGGACACCAT...GACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp TATAAAGACAAATCCATAGCACACAATGGCACCTTCTTACTTCCAACATCTGGGCGCAGTGGTCCATGCTaGCAGACTTGCCATCACTGC +
Preference number: 4 (lower is better)
Translates to: YKDKSIAHNGTFLLPTSGRSGPC*QTCHHC
Trigger: GCAGTGATGGCAAGTCTGTCAGCATGGACCACTGCG...CCCAGATGTTGGAAGTAAGAAGGTGCCATTGTGTGCTATGGATTTGTCTTTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp GATCAAGTTTACTCAAGTCTGTGCGAAATCCTTCAGGTTCTCTTCCTCTCATTTGAGACAGCTCTTGTCTaGAGCCCCTTCCCACATGCC +
Preference number: 4 (lower is better)
Translates to: DQVYSSLCEILQVLFLSFETALV*SPFPHA
Trigger: GGCATGTGGGAAGGGGCTGCAGACAAGAGCTGTCTC...AAATGAGAGGAAGAGAACCTGAAGGATTTCGCACAGACTTGAGTAAACTTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp CTTGACAGAAATAGCTTGCAGAAGGGAATATTTTGTCTCAAGTTCTCAGGGCTTACAGAGGGGGCGCGATaGCCACACGAGTTCTATGCT +
Preference number: 4 (lower is better)
Translates to: LDRNSLQKGIFCLKFSGLTEGAR*PHEFYA
Trigger: AGCATAGAACTCGTGTGGCCATCGCGCCCCCTCTGT...AAGCCCTGAGAACTTGAGACAAAATATTCCCTTCTGCAAGCTATTTCTGTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp CTGGCCACATGCATGTGGGAAACCATCAACACAGTGAAAGAGAAGGCTCTTTATTTCTTCCATCACTTCTaGTACACCACACCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LATCMWETINTVKEKALYFFHHF*YTTPAW
Trigger: CCAGGCAGGTGTGGTGTACCAGAAGTGATGGAAGAA...ATAAAGAGCCTTCTCTTTCACTGTGTTGATGGTTTCCCACATGCATGTGGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp CATTTGCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTCAGTTCTTACACCTCCCGGGTCTaGATCCCACCACCACAGATT +
Preference number: 4 (lower is better)
Translates to: HLHTAKEKQKGSGIYLSSYTSRV*IPPPQI
Trigger: AATCTGTGGTGGTGGGATCCAGACCCGGGAGGTGTA...AGAACTGAGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp ATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTATGGCTGGCAGGGCCGTaGGCATGGTGTCCACTCACT +
Preference number: 4 (lower is better)
Translates to: ISLLTLCTFHLETTQFTLWLAGP*AWCPLT
Trigger: AGTGAGTGGACACCATGCCCACGGCCCTGCCAGCCA...TAGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp TTCCTGGTATGCTATCCTGTGCTACCCTCCATCAGGGTCCTCATGCACACACACGTCATTTCTGCAGACTaGTTATCATCAGAGATGCAT +
Preference number: 4 (lower is better)
Translates to: FLVCYPVLPSIRVLMHTHVISAD*LSSEMH
Trigger: ATGCATCTCTGATGATAACCAGTCTGCAGAAATGAC...GTGTGTGTGCATGAGGACCCTGATGGAGGGTAGCACAGGATAGCATACCAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp GTCAGACTCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGATTGTCTACAGGGACGCATCCTaGCACTTCTCTTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: VRLAIYSKCLDWTFLWIVYRDAS*HFSFFL
Trigger: CAGGAAGAAAGAGAAGTGCCAGGATGCGTCCCTGTA...GACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp CTGGCCACATGCATGTGGGAAACCATCAACACAGTGAAAGAGAAGGCTCTTTATCGTATCACAGGGACATaGTTCCATTTCCACCAGAGG +
Preference number: 4 (lower is better)
Translates to: LATCMWETINTVKEKALYRITGT*FHFHQR
Trigger: CCTCTGGTGGAAATGGAACCATGTCCCTGTGATACG...ATAAAGAGCCTTCTCTTTCACTGTGTTGATGGTTTCCCACATGCATGTGGCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp CTCAGTTCTGTGACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAATATTTTGGGACATTGCAAAGCTaGGAGGCTGAGGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LSSVTKYLTEIACRREYFGTLQS*EAEGAG
Trigger: ACCTGCCCCCTCAGCCTCTCAGCTTTGCAATGTCCC...AAAATATTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGTCACAGAACTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp AGAAGTCTGAGAGCTACAAAAGAGAAAGCATTTAAGGCAGCAGTTGATGTCTACGGACTGAGAGCAGGATaGCCACACTGTCCACTCACT +
Preference number: 4 (lower is better)
Translates to: RSLRATKEKAFKAAVDVYGLRAG*PHCPLT
Trigger: AGTGAGTGGACAGTGTGGTCATCCTGCTCTCAGTCC...GTAGACATCAACTGCTGCCTTAAATGCTTTCTCTTTTGTAGCTCTCAGACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp GCATTTGCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTCAGTTCGAAAGAGCTTCCTCATaGTCCTGGAAACCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: AFAHCKREAEGVRYISQFERASS*SWKPSE
Trigger: CTCACTGGGTTTCCAGGAGCATGAGGAAGCTCTTTC...GAACTGAGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGCAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR GCA 90 bp CTGTGGATTGTCAATATGCGGCTGAGGATCAAGTTTACTCAAGTCTGTGCGAAAGAAAGAGCTTCCTCATaGTCCTGGAAACCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: LWIVNMRLRIKFTQVCAKERASS*SWKPSE
Trigger: CTCACTGGGTTTCCAGGAGCATGAGGAAGCTCTTTC...TTTCGCACAGACTTGAGTAAACTTGATCCTCAGCCGCATATTGACAATCCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp TTTGCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTCAGTTCTGTTGGAACAGGTCACTGTaGCAGTCACACACGCGGAAA +
Preference number: 4 (lower is better)
Translates to: FAHCKREAEGVRYISQFCWNRSL*QSHTRK
Trigger: TTTCCGCGTGTGTGACTGGCACAGTGACCTGTTCCA...ACAGAACTGAGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR GCA 90 bp GCATTTGCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTCAGTTCTGTAACCAGAGCTGTTaGAGAATGAGGGGTCAACCG +
Preference number: 4 (lower is better)
Translates to: AFAHCKREAEGVRYISQFCNQSC*RMRGQP
Trigger: CGGTTGACCCCTCATTCTGCAACAGCTCTGGTTACA...GAACTGAGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGCAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp AATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTCATACAGCACGACTTTaGGCTCCGCCTGGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: NFLANTLHISSGNYPIYSHTARL*APPGPQ
Trigger: CTGCGGACCAGGCGGAGCCCAAAGTCGTGCTGTATG...AGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp GCATTTGCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTCAGTTCACAGCTCCTTTCCTTTaGAGGTTGGCTGCTCTCATC +
Preference number: 4 (lower is better)
Translates to: AFAHCKREAEGVRYISQFTAPFL*RLAALI
Trigger: GATGAGAGCAGCCAACCTCCAAAGGAAAGGAGCTGT...GAACTGAGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGCAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp CTGTGGATTGTCAATATGCGGCTGAGGATCAAGTTTACTCAAGTCTGTGCGAAAGCCTGGAGACTTCCTTaGTCCTTGATGCAATGGTTG +
Preference number: 4 (lower is better)
Translates to: LWIVNMRLRIKFTQVCAKAWRLP*SLMQWL
Trigger: CAACCATTGCATCAAGGACCAAGGAAGTCTCCAGGC...TTTCGCACAGACTTGAGTAAACTTGATCCTCAGCCGCATATTGACAATCCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp TACAGTGTCAGACTCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGCCAGCGATGACACATTaGATCCTCACAAGGTACAGA +
Preference number: 4 (lower is better)
Translates to: YSVRLAIYSKCLDWTFLWPAMTH*ILTRYR
Trigger: TCTGTACCTTGTGAGGATCCAATGTGTCATCGCTGG...CCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGACACTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp ATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTAGCAGGGCCGTGGGCATaGTGTCCACTCACTGAAAGC +
Preference number: 4 (lower is better)
Translates to: ISLLTLCTFHLETTQFTLAGPWA*CPLTES
Trigger: GCTTTCAGTGAGTGGACACCATGCCCACGGCCCTGC...TAGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp AATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTTCCCACATGCCTCACTaGTGCCTGTTCTCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: NFLANTLHISSGNYPIYSSHMPH*CLFSPA
Trigger: GGCAGGGGAGAACAGGCACCAGTGAGGCATGTGGGA...AGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp AAGGTAAAAACTCAGAGAACTTCTGAAATGGCAACCCATTCTCTCTGTGTTCATCGTCCCGACAGGGAATaGTGCATTCCTGCACAAGGG +
Preference number: 4 (lower is better)
Translates to: KVKTQRTSEMATHSLCVHRPDRE*CIPAQG
Trigger: CCCTTGTGCAGGAATGCACCATTCCCTGTCGGGACG...ATGAACACAGAGAGAATGGGTTGCCATTTCAGAAGTTCTCTGAGTTTTTACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp CTTCCTGGTATGCTATCCTGTGCTACCCTCCATCAGGGTCCTCATGCACACACAGTCTTCCATTTATATTaGAGCATGCTATTGCTCGAA +
Preference number: 4 (lower is better)
Translates to: LPGMLSCATLHQGPHAHTVFHLY*SMLLLE
Trigger: TTCGAGCAATAGCATGCTCCAATATAAATGGAAGAC...TGTGTGTGCATGAGGACCCTGATGGAGGGTAGCACAGGATAGCATACCAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp GATCAAGTTTACTCAAGTCTGTGCGAAATCCTTCAGGTTCTCTTCCTCTCATTTCAGGCCTGGGTTTCTTaGGGAGCATCATCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: DQVYSSLCEILQVLFLSFQAWVS*GASSWL
Trigger: CAACCAGGATGATGCTCCCCAAGAAACCCAGGCCTG...AAATGAGAGGAAGAGAACCTGAAGGATTTCGCACAGACTTGAGTAAACTTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp CTGTGGATTGTCAATATGCGGCTGAGGATCAAGTTTACTCAAGTCTGTGCGAAAAGAAGAGAACAGGCCTaGGTTTCTTGGGGAGCATCA +
Preference number: 4 (lower is better)
Translates to: LWIVNMRLRIKFTQVCAKRREQA*VSWGAS
Trigger: TGATGCTCCCCAAGAAACCCAGGCCTGTTCTCTTCT...TTTCGCACAGACTTGAGTAAACTTGATCCTCAGCCGCATATTGACAATCCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp AAGGTAAAAACTCAGAGAACTTCTGAAATGGCAACCCATTCTCTCTGTGTTCATGGGCAGGGTTTCTGCTaGGTGAGTTCTGTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: KVKTQRTSEMATHSLCVHGQGFC*VSSVGH
Trigger: ATGCCCCACAGAACTCACCCAGCAGAAACCCTGCCC...ATGAACACAGAGAGAATGGGTTGCCATTTCAGAAGTTCTCTGAGTTTTTACCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp TATAAAGACAAATCCATAGCACACAATGGCACCTTCTTACTTCCAACATCTGGGAATGTGGCAGTCTCCTaGGCAAGGCACAGAGCACAG +
Preference number: 4 (lower is better)
Translates to: YKDKSIAHNGTFLLPTSGNVAVS*ARHRAQ
Trigger: CTGTGCTCTGTGCCTTGCCCAGGAGACTGCCACATT...CCCAGATGTTGGAAGTAAGAAGGTGCCATTGTGTGCTATGGATTTGTCTTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp TATATGACTAAGCATATTAGCATTTGCACACTGCAAAAGAGAAGCAGAAGGGGTTTCCTGCCTTCCAAATaGGCTGCTTGGGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: YMTKHISICTLQKRSRRGFLPSK*AAWDSR
Trigger: CCTGCTGTCCCAAGCAGCTCATTTGGAAGGCAGGAA...ACCCCTTCTGCTTCTCTTTTGCAGTGTGCAAATGCTAATATGCTTAGTCATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp CTGTGGATTGTCAATATGCGGCTGAGGATCAAGTTTACTCAAGTCTGTGCGAAAATCATCAGAGATGCATaGGACAGCTCTTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: LWIVNMRLRIKFTQVCAKIIRDA*DSSCLQ
Trigger: CTGCAGACAAGAGCTGTCTCATGCATCTCTGATGAT...TTTCGCACAGACTTGAGTAAACTTGATCCTCAGCCGCATATTGACAATCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp GAAATAGCTTGCAGAAGGGAATATTTTGTCTCAAGTTCTCAGGGCTTTCAGTTCTGCCGCCTCCTGATCTaGGTTGCTTCACAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: EIACRREYFVSSSQGFQFCRLLI*VASQFL
Trigger: CAAGAACTGTGAAGCAACTCAGATCAGGAGGCGGCA...GAACTGAAAGCCCTGAGAACTTGAGACAAAATATTCCCTTCTGCAAGCTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp GAAATAGCTTGCAGAAGGGAATATTTTGTCTCAAGTTCTCAGGGCTTTCAGTTCTTAGCTGCCGCCTCCTaGTCTGAGTTGCTTCACAGT +
Preference number: 4 (lower is better)
Translates to: EIACRREYFVSSSQGFQFLAAAS*SELLHS
Trigger: ACTGTGAAGCAACTCAGATCAGGAGGCGGCAGCTAA...GAACTGAAAGCCCTGAGAACTTGAGACAAAATATTCCCTTCTGCAAGCTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp TCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGATTGTCAATATGCTGGCGAGGTGTGCTTTaGTGTGGTTTTGGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: SPFTVNASIGLSCGLSICWRGVL*CGFGFL
Trigger: CAAGAAGCCAAAACCACATCAAAGCACACCTCGCCA...GCATATTGACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp CTGGCCACATGCATGTGGGAAACCATCAACACAGTGAAAGAGAAGGCTCTTTATACACGAGTTCTATGCTaGAGTTTCTTCCCACATCCT +
Preference number: 4 (lower is better)
Translates to: LATCMWETINTVKEKALYTRVLC*SFFPHP
Trigger: AGGATGTGGGAAGAAACTGCAGCATAGAACTCGTGT...ATAAAGAGCCTTCTCTTTCACTGTGTTGATGGTTTCCCACATGCATGTGGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR GCA 90 bp GCATTTGCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTCAGTTCCTGGGAGTGGTGGTGTaGTTTGTAACTCTGATGTGT +
Preference number: 4 (lower is better)
Translates to: AFAHCKREAEGVRYISQFLGVVV*FVTLMC
Trigger: ACACATCAGAGTTACAAAGCACACCACCACTCCCAG...GAACTGAGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGCAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR GCA 90 bp GAAATAGCTTGCAGAAGGGAATATTTTGTCTCAAGTTCTCAGGGCTTTCAGTTCTCGAGCAAGGGACATTaGAAAGCTGAGAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: EIACRREYFVSSSQGFQFSSKGH*KAERLR
Trigger: CCTCAGCCTCTCAGCTTTGCAATGTCCCTTGCTCGA...GAACTGAAAGCCCTGAGAACTTGAGACAAAATATTCCCTTCTGCAAGCTATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR GCA 90 bp ATATTAGCATTTGCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTACAAGGTACAGATTCTaGCAGATGAGGGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: ILAFAHCKREAEGVRYISTRYRF*QMRAAP
Trigger: GGGCGCTGCCCTCATCTGGCAGAATCTGTACCTTGT...AGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGCAAATGCTAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR GCA 90 bp AAGGTAAAAACTCAGAGAACTTCTGAAATGGCAACCCATTCTCTCTGTGTTCATACAAGGTACAGATTCTaGCAGATGAGGGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: KVKTQRTSEMATHSLCVHTRYRF*QMRAAP
Trigger: GGGCGCTGCCCTCATCTGGCAGAATCTGTACCTTGT...ATGAACACAGAGAGAATGGGTTGCCATTTCAGAAGTTCTCTGAGTTTTTACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp AATATTTTGTCTCAAGTTCTCAGGGCTTTCAGTTCACAGTCACCTGGCCACATGTCTTTGTCATCTCCTTaGACCCACAATCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: NILSQVLRAFSSQSPGHMSLSSP*THNPPC
Trigger: GCAAGGAGGATTGTGGGTGCAAGGAGATGACAAAGA...CATGTGGCCAGGTGACTGTGAACTGAAAGCCCTGAGAACTTGAGACAAAATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR GCA 90 bp GCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTCAGTTCTGTGACACAGGGGATGACACATaGTTCCTGAATGTAACCAGA +
Preference number: 4 (lower is better)
Translates to: AHCKREAEGVRYISQFCDTGDDT*FLNVTR
Trigger: TCTGGTTACATTCAGGAAGCATGTGTCATCCCCTGT...GTCACAGAACTGAGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR GCA 90 bp AGAAGTCTGAGAGCTACAAAAGAGAAAGCATTTAAGGCAGCAGTTGATGTCTACGAGCATCATCCTGGTTaGACAGGCTCCTGTTCACTG +
Preference number: 4 (lower is better)
Translates to: RSLRATKEKAFKAAVDVYEHHPG*TGSCSL
Trigger: CAGTGAACAGGAGCCTGTGCAACCAGGATGATGCTC...GTAGACATCAACTGCTGCCTTAAATGCTTTCTCTTTTGTAGCTCTCAGACTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp AAGGTAAAAACTCAGAGAACTTCTGAAATGGCAACCCATTCTCTCTGTGTTCATATGACTGTGGGCATCTaGTCCATGTTCCCCACTCGG +
Preference number: 4 (lower is better)
Translates to: KVKTQRTSEMATHSLCVHMTVGI*SMFPTR
Trigger: CCGAGTGGGGAACATGGAGCAGATGCCCACAGTCAT...ATGAACACAGAGAGAATGGGTTGCCATTTCAGAAGTTCTCTGAGTTTTTACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp CACTATTACTTTTGTCATATTCGTATTCTGCCCAAGGTATCACATCATGAGATTATCGAGTCCGGCTCATaGGACCTCCTTGGCCACAGG +
Preference number: 4 (lower is better)
Translates to: HYYFCHIRILPKVSHHEIIESGS*DLLGHR
Trigger: CCTGTGGCCAAGGAGGTCGCATGAGCCGGACTCGAT...AATCTCATGATGTGATACCTTGGGCAGAATACGAATATGACAAAAGTAATAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp TGGCAACCCATTCTCTCTGTGTTCATGAAAATAGGCAATCCAATTTGCAAGTTTAAGAGGACAGGAAACTaGAGCCTCGCAGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: WQPILSVFMKIGNPICKFKRTGN*SLAGSG
Trigger: TCCAGAGCCTGCGAGGCTCCAGTTTCCTGTCCTCTT...AAACTTGCAAATTGGATTGCCTATTTTCATGAACACAGAGAGAATGGGTTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp CTTGACAGAAATAGCTTGCAGAAGGGAATATTTTGTCTCAAGTTCTCAGGGCTTGGAACAGGGGCTCCATaGAGACCATTCAGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: LDRNSLQKGIFCLKFSGLGTGAP*RPFRSL
Trigger: GAGACTTCTGAATGGTCTCCATGGAGCCCCTGTTCC...AAGCCCTGAGAACTTGAGACAAAATATTCCCTTCTGCAAGCTATTTCTGTCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp ATATATCTCAGTTCTGTGACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAACAGAACGGCAGGTCTTaGAACAGGGGCTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: IYLSSVTKYLTEIACRREQNGRS*NRGSME
Trigger: CTCCATGGAGCCCCTGTTCCAAGACCTGCCGTTCTG...TTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGTCACAGAACTGAGATATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp TATTTAAAGGTAAAAACTCAGAGAACTTCTGAAATGGCAACCCATTCTCTCTGTGTTGCTGGTAGGCTCTaGGCACAGTACACCTCCCGG +
Preference number: 4 (lower is better)
Translates to: YLKVKTQRTSEMATHSLCVAGRL*AQYTSR
Trigger: CCGGGAGGTGTACTGTGCCCAGAGCCTACCAGCAAC...ACAGAGAGAATGGGTTGCCATTTCAGAAGTTCTCTGAGTTTTTACCTTTAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp GCATTTGCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTCAGTTCCTGCCTGATAGACTCTaGAACCAGGATACAAGAGCT +
Preference number: 4 (lower is better)
Translates to: AFAHCKREAEGVRYISQFLPDRL*NQDTRA
Trigger: AGCTCTTGTATCCTGGTTCCAGAGTCTATCAGGCAG...GAACTGAGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGCAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp TCTCAGTTCTGTGACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAATATTTCGTCCCGACAGGGAATaGTGCATTCCTGCACAAGGG +
Preference number: 4 (lower is better)
Translates to: SQFCDQILDRNSLQKGIFRPDRE*CIPAQG
Trigger: CCCTTGTGCAGGAATGCACCATTCCCTGTCGGGACG...AAATATTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGTCACAGAACTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp AAGGTAAAAACTCAGAGAACTTCTGAAATGGCAACCCATTCTCTCTGTGTTCATTGGAAACCCAGTGAGTaGCAGCCAGATCACTCCTCA +
Preference number: 4 (lower is better)
Translates to: KVKTQRTSEMATHSLCVHWKPSE*QPDHSS
Trigger: TGAGGAGTGATCTGGCTGTCACTCACTGGGTTTCCA...ATGAACACAGAGAGAATGGGTTGCCATTTCAGAAGTTCTCTGAGTTTTTACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp TCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACACTTTCCTGCCTTCCAAATaGGCTGCTTGGGACAGCAGG +
Preference number: 4 (lower is better)
Translates to: SNSLPHSPVHSPNFLANTFLPSK*AAWDSR
Trigger: CCTGCTGTCCCAAGCAGCTCATTTGGAAGGCAGGAA...AGTGTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp CTGAGAGCTACAAAAGAGAAAGCATTTAAGGCAGCAGTTGATGTCTACATTTGGAAGCCTTTCTTCCCCTaGGGATCATGGCAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: LRATKEKAFKAAVDVYIWKPFFP*GSWQFS
Trigger: TGAGAACTGCCATGATCCTCAGGGGAAGAAAGGCTT...CCAAATGTAGACATCAACTGCTGCCTTAAATGCTTTCTCTTTTGTAGCTCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp GAAATAGCTTGCAGAAGGGAATATTTTGTCTCAAGTTCTCAGGGCTTTCAGTTCTCTCCTCGCTCATTCTaGCAGACAGCCTTCAGAATG +
Preference number: 4 (lower is better)
Translates to: EIACRREYFVSSSQGFQFSPRSF*QTAFRM
Trigger: CATTCTGAAGGCTGTCTGTCAGAATGAGCGAGGAGA...GAACTGAAAGCCCTGAGAACTTGAGACAAAATATTCCCTTCTGCAAGCTATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp ATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTAGGAAACAGTTTTCATTaGGGAGGCAGGGCCGCACCT +
Preference number: 4 (lower is better)
Translates to: ISLLTLCTFHLETTQFTLGNSFH*GGRAAP
Trigger: AGGTGCGGCCCTGCCTCCTCAATGAAAACTGTTTCC...TAGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp AAGGTAAAAACTCAGAGAACTTCTGAAATGGCAACCCATTCTCTCTGTGTTCATCTGAGAGCTGACAGTTaGCCACACATTCCACCAGAC +
Preference number: 4 (lower is better)
Translates to: KVKTQRTSEMATHSLCVHLRADS*PHIPPD
Trigger: GTCTGGTGGAATGTGTGGTCAACTGTCAGCTCTCAG...ATGAACACAGAGAGAATGGGTTGCCATTTCAGAAGTTCTCTGAGTTTTTACCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp TGGCAACCCATTCTCTCTGTGTTCATGAAAATAGGCAATCCAATTTGCAAGTTTTGGAACAGGTCACTGTaGCAGTCACACACGCGGAAA +
Preference number: 4 (lower is better)
Translates to: WQPILSVFMKIGNPICKFWNRSL*QSHTRK
Trigger: TTTCCGCGTGTGTGACTGGCACAGTGACCTGTTCCA...AAACTTGCAAATTGGATTGCCTATTTTCATGAACACAGAGAGAATGGGTTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp AGAAGTCTGAGAGCTACAAAAGAGAAAGCATTTAAGGCAGCAGTTGATGTCTACCCTCCAATAGCAATATaGTTCACGTTCCGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RSLRATKEKAFKAAVDVYPPIAI*FTFRLL
Trigger: CAGGAGCCGGAACGTGAAGCATATTGCTATTGGAGG...GTAGACATCAACTGCTGCCTTAAATGCTTTCTCTTTTGTAGCTCTCAGACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp GAAATAGCTTGCAGAAGGGAATATTTTGTCTCAAGTTCTCAGGGCTTTCAGTTCCAAGAGCTCCATTTCTaGGGCTTCCACCGGTATGAA +
Preference number: 4 (lower is better)
Translates to: EIACRREYFVSSSQGFQFQELHF*GFHRYE
Trigger: TTCATACCGGTGGAAGCCGCAGAAATGGAGCTCTTG...GAACTGAAAGCCCTGAGAACTTGAGACAAAATATTCCCTTCTGCAAGCTATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR GCA 90 bp TATAAAGACAAATCCATAGCACACAATGGCACCTTCTTACTTCCAACATCTGGGCAAGAGCTCCATTTCTaGGGCTTCCACCGGTATGAA +
Preference number: 4 (lower is better)
Translates to: YKDKSIAHNGTFLLPTSGQELHF*GFHRYE
Trigger: TTCATACCGGTGGAAGCCGCAGAAATGGAGCTCTTG...CCCAGATGTTGGAAGTAAGAAGGTGCCATTGTGTGCTATGGATTTGTCTTTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp CTGTGGATTGTCAATATGCGGCTGAGGATCAAGTTTACTCAAGTCTGTGCGAAAAGACTCCTCCCTGTGTaGAGTAGGAGAAAGGTTTTT +
Preference number: 4 (lower is better)
Translates to: LWIVNMRLRIKFTQVCAKRLLPV*SRRKVF
Trigger: AAAAACCTTTCTCCTACTGCACACAGGGAGGAGTCT...TTTCGCACAGACTTGAGTAAACTTGATCCTCAGCCGCATATTGACAATCCACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp AATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTTCGGAAACCTCCCACTaGAACAGGTCACTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: NFLANTLHISSGNYPIYSSETSH*NRSLCQ
Trigger: CTGGCACAGTGACCTGTTCCAGTGGGAGGTTTCCGA...AGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp TTATCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACGGGGCAGGTGGACCATaGGGAGAACTCAGATACCAC +
Preference number: 4 (lower is better)
Translates to: LSNSLPHSPVHSPNFLANGAGGP*GELRYH
Trigger: GTGGTATCTGAGTTCTCCCCATGGTCCACCTGCCCC...GTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp CACTATTACTTTTGTCATATTCGTATTCTGCCCAAGGTATCACATCATGAGATTACAGAGGGGGCGCGATaGCCACACGAGTTCTATGCT +
Preference number: 4 (lower is better)
Translates to: HYYFCHIRILPKVSHHEITEGAR*PHEFYA
Trigger: AGCATAGAACTCGTGTGGCCATCGCGCCCCCTCTGT...AATCTCATGATGTGATACCTTGGGCAGAATACGAATATGACAAAAGTAATAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp GACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAATATTTTGTCTCAAGTTCAAGAGGACAGGAAACTaGAGCCTCGCAGGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: DQILDRNSLQKGIFCLKFKRTGN*SLAGSG
Trigger: TCCAGAGCCTGCGAGGCTCCAGTTTCCTGTCCTCTT...GAACTTGAGACAAAATATTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp CACTATTACTTTTGTCATATTCGTATTCTGCCCAAGGTATCACATCATGAGATTCAGAACGGCAGGTCTTaGAACAGGGGCTCCATGGAG +
Preference number: 4 (lower is better)
Translates to: HYYFCHIRILPKVSHHEIQNGRS*NRGSME
Trigger: CTCCATGGAGCCCCTGTTCCAAGACCTGCCGTTCTG...AATCTCATGATGTGATACCTTGGGCAGAATACGAATATGACAAAAGTAATAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp TCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGATTGTCAATATGCGGAATACCTGGGACATaGTTGCAGAAATTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: SPFTVNASIGLSCGLSICGIPGT*LQKFPF
Trigger: GAAGGGGAATTTCTGCAACCATGTCCCAGGTATTCC...GCATATTGACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp AATATTTTGTCTCAAGTTCTCAGGGCTTTCAGTTCACAGTCACCTGGCCACATGGCAGTCTTTCTTGCATaGGAGGAAACAAGGTCTTAC +
Preference number: 4 (lower is better)
Translates to: NILSQVLRAFSSQSPGHMAVFLA*EETRSY
Trigger: GTAAGACCTTGTTTCCTCCCATGCAAGAAAGACTGC...CATGTGGCCAGGTGACTGTGAACTGAAAGCCCTGAGAACTTGAGACAAAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp TCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGATTGTCAATATGCTCCTCTTCCACAGCGTaGGGATCTCAGCTCATTATT +
Preference number: 4 (lower is better)
Translates to: SPFTVNASIGLSCGLSICSSSTA*GSQLII
Trigger: AATAATGAGCTGAGATCCCCACGCTGTGGAAGAGGA...GCATATTGACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp TCTGTGACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAATATTTTGTCTCATGGAAACCCAGTGAGTaGCAGCCAGATCACTCCTCA +
Preference number: 4 (lower is better)
Translates to: SVTKYLTEIACRREYFVSWKPSE*QPDHSS
Trigger: TGAGGAGTGATCTGGCTGTCACTCACTGGGTTTCCA...TGAGACAAAATATTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGTCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp TATTTAAAGGTAAAAACTCAGAGAACTTCTGAAATGGCAACCCATTCTCTCTGTAGGCTCTGGACTCCGTaGGATTTGGACACTGCAGAC +
Preference number: 4 (lower is better)
Translates to: YLKVKTQRTSEMATHSLCRLWTP*DLDTAD
Trigger: GTCTGCAGTGTCCAAATCTCACGGAGTCCAGAGCCT...ACAGAGAGAATGGGTTGCCATTTCAGAAGTTCTCTGAGTTTTTACCTTTAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp TATATGACTAAGCATATTAGCATTTGCACACTGCAAAAGAGAAGCAGAAGGGGTAAGCCTTTCTTCCCCTaGGGATCATGGCAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: YMTKHISICTLQKRSRRGKPFFP*GSWQFS
Trigger: TGAGAACTGCCATGATCCTCAGGGGAAGAAAGGCTT...ACCCCTTCTGCTTCTCTTTTGCAGTGTGCAAATGCTAATATGCTTAGTCATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp AATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTGAGGCAAGCCAGCGATaGCACATTGGATCCTCACAA +
Preference number: 4 (lower is better)
Translates to: NFLANTLHISSGNYPIYSEASQR*HIGSSQ
Trigger: TTGTGAGGATCCAATGTGTCATCGCTGGCTTGCCTC...AGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp ATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTAGTCCATCCTGAGAGCTaGCAGTTGACCACACATTCC +
Preference number: 4 (lower is better)
Translates to: ISLLTLCTFHLETTQFTLVHPES*QLTTHS
Trigger: GGAATGTGTGGTCAACTGTCAGCTCTCAGGATGGAC...TAGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp CTGAGAGCTACAAAAGAGAAAGCATTTAAGGCAGCAGTTGATGTCTACATTTGGTACCTGGGACATGGTTaGAGAAATTCCCCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LRATKEKAFKAAVDVYIWYLGHG*RNSPSA
Trigger: TGCTGAAGGGGAATTTCTGCAACCATGTCCCAGGTA...CCAAATGTAGACATCAACTGCTGCCTTAAATGCTTTCTCTTTTGTAGCTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp AATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTTCGAGCAAGGGACATTaGAAAGCTGAGAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: NFLANTLHISSGNYPIYSSSKGH*KAERLR
Trigger: CCTCAGCCTCTCAGCTTTGCAATGTCCCTTGCTCGA...AGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp CTGTGGATTGTCAATATGCGGCTGAGGATCAAGTTTACTCAAGTCTGTGCGAAAACTGTAACATGGGACTaGCTCATGAACCTGATTCTT +
Preference number: 4 (lower is better)
Translates to: LWIVNMRLRIKFTQVCAKTVTWD*LMNLIL
Trigger: AAGAATCAGGTTCATGAGGCAGTCCCATGTTACAGT...TTTCGCACAGACTTGAGTAAACTTGATCCTCAGCCGCATATTGACAATCCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp AATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTGAGGGCCTCAGCAGATaGCGAGTTCTTCTCTGCATT +
Preference number: 4 (lower is better)
Translates to: NFLANTLHISSGNYPIYSEGLSR*RVLLCI
Trigger: AATGCAGAGAAGAACTCGGCATCTGCTGAGGCCCTC...AGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp TGGCAACCCATTCTCTCTGTGTTCATGAAAATAGGCAATCCAATTTGCAAGTTTGCCCTCCAATTTACATaGAGACCAGTTGCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: WQPILSVFMKIGNPICKFALQFT*RPVAKD
Trigger: GTCCTTGGCAACTGGTCTGCATGTAAATTGGAGGGC...AAACTTGCAAATTGGATTGCCTATTTTCATGAACACAGAGAGAATGGGTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp AATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTGGCACAGAGCACAGCTaGTTCAGGATTCCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: NFLANTLHISSGNYPIYSGTEHS*FRIPSW
Trigger: CCAAGAAGGAATCCTGAAGCAGCTGTGCTCTGTGCC...AGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp AATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTCATGCTGGAATGCATTaGCGAATAGCAGCAGGGCGT +
Preference number: 4 (lower is better)
Translates to: NFLANTLHISSGNYPIYSHAGMH*RIAAGR
Trigger: ACGCCCTGCTGCTATTCGGCAATGCATTCCAGCATG...AGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp CTGAGAGCTACAAAAGAGAAAGCATTTAAGGCAGCAGTTGATGTCTACATTTGGTCTGATGGCGAGGTGTaGTTTGATGTGGTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LRATKEKAFKAAVDVYIWSDGEV*FDVVLA
Trigger: AGCCAAAACCACATCAAAGCACACCTCGCCATCAGA...CCAAATGTAGACATCAACTGCTGCCTTAAATGCTTTCTCTTTTGTAGCTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp AGAAGTCTGAGAGCTACAAAAGAGAAAGCATTTAAGGCAGCAGTTGATGTCTACAGTTCTGGGCATTCCTaGCCACCTCCAATAGCAATA +
Preference number: 4 (lower is better)
Translates to: RSLRATKEKAFKAAVDVYSSGHS*PPPIAI
Trigger: TATTGCTATTGGAGGTGGCCAGGAATGCCCAGAACT...GTAGACATCAACTGCTGCCTTAAATGCTTTCTCTTTTGTAGCTCTCAGACTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp AAGGTAAAAACTCAGAGAACTTCTGAAATGGCAACCCATTCTCTCTGTGTTCATTTTCTCAAGAAGTTCTaGGCATTCCTGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: KVKTQRTSEMATHSLCVHFLKKF*AFLATS
Trigger: GGAGGTGGCCAGGAATGCCCAGAACTTCTTGAGAAA...ATGAACACAGAGAGAATGGGTTGCCATTTCAGAAGTTCTCTGAGTTTTTACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp GAAATAGCTTGCAGAAGGGAATATTTTGTCTCAAGTTCTCAGGGCTTTCAGTTCGGAATACCTGGGACATaGTTGCAGAAATTCCCCTTC +
Preference number: 4 (lower is better)
Translates to: EIACRREYFVSSSQGFQFGIPGT*LQKFPF
Trigger: GAAGGGGAATTTCTGCAACCATGTCCCAGGTATTCC...GAACTGAAAGCCCTGAGAACTTGAGACAAAATATTCCCTTCTGCAAGCTATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp TTATCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACTACACCTCCCGGGTCTaGATCCCACCACCACAGATT +
Preference number: 4 (lower is better)
Translates to: LSNSLPHSPVHSPNFLANYTSRV*IPPPQI
Trigger: AATCTGTGGTGGTGGGATCCAGACCCGGGAGGTGTA...GTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp TCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGATTGTCAATATGCGCAGTCTTTCTTGCATaGGAGGAAACAAGGTCTTAC +
Preference number: 4 (lower is better)
Translates to: SPFTVNASIGLSCGLSICAVFLA*EETRSY
Trigger: GTAAGACCTTGTTTCCTCCCATGCAAGAAAGACTGC...GCATATTGACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp TCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGATTGTCAATATGCCCATTGGCTGCTTCCTaGATGATAATCCTGTATCGA +
Preference number: 4 (lower is better)
Translates to: SPFTVNASIGLSCGLSICPLAAS*MIILYR
Trigger: TCGATACAGGATTATCATCCAGGAAGCAGCCAATGG...GCATATTGACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp CTGAGAGCTACAAAAGAGAAAGCATTTAAGGCAGCAGTTGATGTCTACATTTGGCTGCCTGATAGACTCTaGAACCAGGATACAAGAGCT +
Preference number: 4 (lower is better)
Translates to: LRATKEKAFKAAVDVYIWLPDRL*NQDTRA
Trigger: AGCTCTTGTATCCTGGTTCCAGAGTCTATCAGGCAG...CCAAATGTAGACATCAACTGCTGCCTTAAATGCTTTCTCTTTTGTAGCTCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp GTCAGACTCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGATTGTCGTCATTTCTGCAGACTaGTTATCATCAGAGATGCAT +
Preference number: 4 (lower is better)
Translates to: VRLAIYSKCLDWTFLWIVVISAD*LSSEMH
Trigger: ATGCATCTCTGATGATAACCAGTCTGCAGAAATGAC...GACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp CACTATTACTTTTGTCATATTCGTATTCTGCCCAAGGTATCACATCATGAGATTATAGCAGGGTGTCACTaGGCAGGGTTTCTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: HYYFCHIRILPKVSHHEIIAGCH*AGFLLG
Trigger: ACCCAGCAGAAACCCTGCCCAGTGACACCCTGCTAT...AATCTCATGATGTGATACCTTGGGCAGAATACGAATATGACAAAAGTAATAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp CTTGACAGAAATAGCTTGCAGAAGGGAATATTTTGTCTCAAGTTCTCAGGGCTTGGTGACTTGCTCGTTTaGATCAGAGCTAAAATCCTG +
Preference number: 4 (lower is better)
Translates to: LDRNSLQKGIFCLKFSGLGDLLV*IRAKIL
Trigger: CAGGATTTTAGCTCTGATTCAAACGAGCAAGTCACC...AAGCCCTGAGAACTTGAGACAAAATATTCCCTTCTGCAAGCTATTTCTGTCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp ATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTATCTCCTCGCTCATTCTaGCAGACAGCCTTCAGAATG +
Preference number: 4 (lower is better)
Translates to: ISLLTLCTFHLETTQFTLSPRSF*QTAFRM
Trigger: CATTCTGAAGGCTGTCTGTCAGAATGAGCGAGGAGA...TAGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp TTATCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACTGCCGCCTCCTGATCTaGGTTGCTTCACAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: LSNSLPHSPVHSPNFLANCRLLI*VASQFL
Trigger: CAAGAACTGTGAAGCAACTCAGATCAGGAGGCGGCA...GTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp GATCAAGTTTACTCAAGTCTGTGCGAAATCCTTCAGGTTCTCTTCCTCTCATTTTGGGGGCAGCTATCTTaGTTCTCAAAAGACTGGATT +
Preference number: 4 (lower is better)
Translates to: DQVYSSLCEILQVLFLSFWGQLS*FSKDWI
Trigger: AATCCAGTCTTTTGAGAATCAAGATAGCTGCCCCCA...AAATGAGAGGAAGAGAACCTGAAGGATTTCGCACAGACTTGAGTAAACTTGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp TGGCAACCCATTCTCTCTGTGTTCATGAAAATAGGCAATCCAATTTGCAAGTTTGCCACACGAGTTCTATaGTGCAGTTTCTTCCCACAT +
Preference number: 4 (lower is better)
Translates to: WQPILSVFMKIGNPICKFATRVL*CSFFPH
Trigger: ATGTGGGAAGAAACTGCAGCATAGAACTCGTGTGGC...AAACTTGCAAATTGGATTGCCTATTTTCATGAACACAGAGAGAATGGGTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp GACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAATATTTTGTCTCAAGTTCAGACAGCCTTCAGAATaGGATGTCCCAGGCCACATT +
Preference number: 4 (lower is better)
Translates to: DQILDRNSLQKGIFCLKFRQPSE*DVPGHI
Trigger: AATGTGGCCTGGGACATCGCATTCTGAAGGCTGTCT...GAACTTGAGACAAAATATTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR GCA 90 bp AAGGTAAAAACTCAGAGAACTTCTGAAATGGCAACCCATTCTCTCTGTGTTCATTCTTTGTCATCTCCTTaGACCCACAATCCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: KVKTQRTSEMATHSLCVHSLSSP*THNPPC
Trigger: GCAAGGAGGATTGTGGGTGCAAGGAGATGACAAAGA...ATGAACACAGAGAGAATGGGTTGCCATTTCAGAAGTTCTCTGAGTTTTTACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp AATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTTGTAACCAGAGCTGTTaGAGAATGAGGGGTCAACCG +
Preference number: 4 (lower is better)
Translates to: NFLANTLHISSGNYPIYSCNQSC*RMRGQP
Trigger: CGGTTGACCCCTCATTCTGCAACAGCTCTGGTTACA...AGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp TGGCAACCCATTCTCTCTGTGTTCATGAAAATAGGCAATCCAATTTGCAAGTTTCTTTCCTTTGGAGGTTaGCTGCTCTCATCACAGTTC +
Preference number: 4 (lower is better)
Translates to: WQPILSVFMKIGNPICKFLSFGG*LLSSQF
Trigger: GAACTGTGATGAGAGCAGCCAACCTCCAAAGGAAAG...AAACTTGCAAATTGGATTGCCTATTTTCATGAACACAGAGAGAATGGGTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp TATATATCTCAGTTCTGTGACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAGGACTCCGTGAGATTTaGACACTGCAGACCTCCATA +
Preference number: 4 (lower is better)
Translates to: YISQFCDQILDRNSLQKGGLREI*TLQTSI
Trigger: TATGGAGGTCTGCAGTGTCCAAATCTCACGGAGTCC...TCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGTCACAGAACTGAGATATATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp CATTCTCTCTGTGTTCATGAAAATAGGCAATCCAATTTGCAAGTTTTCGAACCAGGACTCCGTGAGATTTaGACACTGCAGACCTCCATA +
Preference number: 4 (lower is better)
Translates to: HSLCVHENRQSNLQVFEPGLREI*TLQTSI
Trigger: TATGGAGGTCTGCAGTGTCCAAATCTCACGGAGTCC...TGGTTCGAAAACTTGCAAATTGGATTGCCTATTTTCATGAACACAGAGAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp ATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTATTCTTCCATCACTTCTaGTACACCACACCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: ISLLTLCTFHLETTQFTLFFHHF*YTTPAW
Trigger: CCAGGCAGGTGTGGTGTACCAGAAGTGATGGAAGAA...TAGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp ATATATCTCAGTTCTGTGACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAATTTCTCAAGAAGTTCTaGGCATTCCTGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: IYLSSVTKYLTEIACRREFLKKF*AFLATS
Trigger: GGAGGTGGCCAGGAATGCCCAGAACTTCTTGAGAAA...TTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGTCACAGAACTGAGATATAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp GACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAATATTTTGTCTCAAGTTCGCCTGGAGACTTCCTTaGTCCTTGATGCAATGGTTG +
Preference number: 4 (lower is better)
Translates to: DQILDRNSLQKGIFCLKFAWRLP*SLMQWL
Trigger: CAACCATTGCATCAAGGACCAAGGAAGTCTCCAGGC...GAACTTGAGACAAAATATTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp GATCAAGTTTACTCAAGTCTGTGCGAAATCCTTCAGGTTCTCTTCCTCTCATTTGACTCCATGAGTACATaGCGCTGTCTCATTCTAAAG +
Preference number: 4 (lower is better)
Translates to: DQVYSSLCEILQVLFLSFDSMST*RCLILK
Trigger: CTTTAGAATGAGACAGCGCCATGTACTCATGGAGTC...AAATGAGAGGAAGAGAACCTGAAGGATTTCGCACAGACTTGAGTAAACTTGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp TCTGTGACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAATATTTTGTCTCATACAGGGACGCATCCTaGCACTTCTCTTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: SVTKYLTEIACRREYFVSYRDAS*HFSFFL
Trigger: CAGGAAGAAAGAGAAGTGCCAGGATGCGTCCCTGTA...TGAGACAAAATATTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGTCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp TATTTAAAGGTAAAAACTCAGAGAACTTCTGAAATGGCAACCCATTCTCTCTGTATCCAGTTTGGGACATaGCCGACCTCCACTGTAAGG +
Preference number: 4 (lower is better)
Translates to: YLKVKTQRTSEMATHSLCIQFGT*PTSTVR
Trigger: CCTTACAGTGGAGGTCGGCCATGTCCCAAACTGGAT...ACAGAGAGAATGGGTTGCCATTTCAGAAGTTCTCTGAGTTTTTACCTTTAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp TACAGTGTCAGACTCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGAGATTGTACTGGAACTaGAAACAGTTTTCATTGAGG +
Preference number: 4 (lower is better)
Translates to: YSVRLAIYSKCLDWTFLWRLYWN*KQFSLR
Trigger: CCTCAATGAAAACTGTTTCCAGTTCCAGTACAATCT...CCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGACACTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp AAGGTAAAAACTCAGAGAACTTCTGAAATGGCAACCCATTCTCTCTGTGTTCATACATTTTCACTCAGCTaGCATGTGCTCCACTCTGTC +
Preference number: 4 (lower is better)
Translates to: KVKTQRTSEMATHSLCVHTFSLS*HVLHSV
Trigger: GACAGAGTGGAGCACATGCCAGCTGAGTGAAAATGT...ATGAACACAGAGAGAATGGGTTGCCATTTCAGAAGTTCTCTGAGTTTTTACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp TTATCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACCTCATGCGACCTCCTTaGCCACAGGTTTGTGAACAC +
Preference number: 4 (lower is better)
Translates to: LSNSLPHSPVHSPNFLANLMRPP*PQVCEH
Trigger: GTGTTCACAAACCTGTGGCCAAGGAGGTCGCATGAG...GTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp GACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAATATTTTGTCTCAAGTTCATCATCAGAGATGCATaGGACAGCTCTTGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: DQILDRNSLQKGIFCLKFIIRDA*DSSCLQ
Trigger: CTGCAGACAAGAGCTGTCTCATGCATCTCTGATGAT...GAACTTGAGACAAAATATTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR GCA 90 bp TGGCAACCCATTCTCTCTGTGTTCATGAAAATAGGCAATCCAATTTGCAAGTTTACTGATTGTCCTTCCTaGCTTCCAAATGAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: WQPILSVFMKIGNPICKFTDCPS*LPNELL
Trigger: AAGCAGCTCATTTGGAAGGCAGGAAGGACAATCAGT...AAACTTGCAAATTGGATTGCCTATTTTCATGAACACAGAGAGAATGGGTTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp TCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACACTCTGGGAGTGGTGGTGTaGTTTGTAACTCTGATGTGT +
Preference number: 4 (lower is better)
Translates to: SNSLPHSPVHSPNFLANTLGVVV*FVTLMC
Trigger: ACACATCAGAGTTACAAAGCACACCACCACTCCCAG...AGTGTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp TCTGTGACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAATATTTTGTCTCATACCTGGGACATGGTTaGAGAAATTCCCCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: SVTKYLTEIACRREYFVSYLGHG*RNSPSA
Trigger: TGCTGAAGGGGAATTTCTGCAACCATGTCCCAGGTA...TGAGACAAAATATTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGTCACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR GCA 90 bp CACTATTACTTTTGTCATATTCGTATTCTGCCCAAGGTATCACATCATGAGATTAGACAGCCTTCAGAATaGGATGTCCCAGGCCACATT +
Preference number: 4 (lower is better)
Translates to: HYYFCHIRILPKVSHHEIRQPSE*DVPGHI
Trigger: AATGTGGCCTGGGACATCGCATTCTGAAGGCTGTCT...AATCTCATGATGTGATACCTTGGGCAGAATACGAATATGACAAAAGTAATAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp GACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAATATTTTGTCTCAAGTTCCAAGGCAGTCTTTCTTaGATGGGAGGAAACAAGGTC +
Preference number: 4 (lower is better)
Translates to: DQILDRNSLQKGIFCLKFQGSLS*MGGNKV
Trigger: GACCTTGTTTCCTCCCATGCAAGAAAGACTGCCTTG...GAACTTGAGACAAAATATTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR GCA 90 bp AGAAGTCTGAGAGCTACAAAAGAGAAAGCATTTAAGGCAGCAGTTGATGTCTACGGTTATCATCAGAGATaGATGAGACAGCTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: RSLRATKEKAFKAAVDVYGYHQR*MRQLLS
Trigger: AGACAAGAGCTGTCTCATGCATCTCTGATGATAACC...GTAGACATCAACTGCTGCCTTAAATGCTTTCTCTTTTGTAGCTCTCAGACTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp AGAAGTCTGAGAGCTACAAAAGAGAAAGCATTTAAGGCAGCAGTTGATGTCTACGCACTCTGTCATTTCTaGAGACTGGTTATCATCAGA +
Preference number: 4 (lower is better)
Translates to: RSLRATKEKAFKAAVDVYALCHF*RLVIIR
Trigger: TCTGATGATAACCAGTCTGCAGAAATGACAGAGTGC...GTAGACATCAACTGCTGCCTTAAATGCTTTCTCTTTTGTAGCTCTCAGACTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp TGGCAACCCATTCTCTCTGTGTTCATGAAAATAGGCAATCCAATTTGCAAGTTTTGCCTTCTGGTAGAATaGAAGCTGACCAGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: WQPILSVFMKIGNPICKFCLLVE*KLTSFH
Trigger: ATGGAAACTGGTCAGCTTGCATTCTACCAGAAGGCA...AAACTTGCAAATTGGATTGCCTATTTTCATGAACACAGAGAGAATGGGTTGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp CACTATTACTTTTGTCATATTCGTATTCTGCCCAAGGTATCACATCATGAGATTCACTCAGCTGGCATGTaGTCCACTCTGTCAGATTGT +
Preference number: 4 (lower is better)
Translates to: HYYFCHIRILPKVSHHEIHSAGM*STLSDC
Trigger: ACAATCTGACAGAGTGGAGCACATGCCAGCTGAGTG...AATCTCATGATGTGATACCTTGGGCAGAATACGAATATGACAAAAGTAATAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp TCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACACTTACATGCAGACCAGTTaGCAAGGACCCAACTATAGC +
Preference number: 4 (lower is better)
Translates to: SNSLPHSPVHSPNFLANTYMQTS*QGPNYS
Trigger: GCTATAGTTGGGTCCTTGGCAACTGGTCTGCATGTA...AGTGTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp GACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAATATTTTGTCTCAAGTTCCTTTCCTTTGGAGGTTaGCTGCTCTCATCACAGTTC +
Preference number: 4 (lower is better)
Translates to: DQILDRNSLQKGIFCLKFLSFGG*LLSSQF
Trigger: GAACTGTGATGAGAGCAGCCAACCTCCAAAGGAAAG...GAACTTGAGACAAAATATTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp TATATATCTCAGTTCTGTGACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAAGTTCTGGGCATTCCTaGCCACCTCCAATAGCAATA +
Preference number: 4 (lower is better)
Translates to: YISQFCDQILDRNSLQKGSSGHS*PPPIAI
Trigger: TATTGCTATTGGAGGTGGCCAGGAATGCCCAGAACT...TCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGTCACAGAACTGAGATATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp GATCAAGTTTACTCAAGTCTGTGCGAAATCCTTCAGGTTCTCTTCCTCTCATTTTTCTCCAGGAATACCTaGGACATGGTTGCAGAAATT +
Preference number: 4 (lower is better)
Translates to: DQVYSSLCEILQVLFLSFFSRNT*DMVAEI
Trigger: AATTTCTGCAACCATGTCCCAGGTATTCCTGGAGAA...AAATGAGAGGAAGAGAACCTGAAGGATTTCGCACAGACTTGAGTAAACTTGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp TCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGATTGTCAATATGCACTCTGGACATCTTTTaGTCATTACTTGTCCCACAT +
Preference number: 4 (lower is better)
Translates to: SPFTVNASIGLSCGLSICTLDIF*SLLVPH
Trigger: ATGTGGGACAAGTAATGACCAAAAGATGTCCAGAGT...GCATATTGACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp CACTATTACTTTTGTCATATTCGTATTCTGCCCAAGGTATCACATCATGAGATTCGTATCACAGGGACATaGTTCCATTTCCACCAGAGG +
Preference number: 4 (lower is better)
Translates to: HYYFCHIRILPKVSHHEIRITGT*FHFHQR
Trigger: CCTCTGGTGGAAATGGAACCATGTCCCTGTGATACG...AATCTCATGATGTGATACCTTGGGCAGAATACGAATATGACAAAAGTAATAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp ATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTAGGTGACTTGCTCGTTTaGATCAGAGCTAAAATCCTG +
Preference number: 4 (lower is better)
Translates to: ISLLTLCTFHLETTQFTLGDLLV*IRAKIL
Trigger: CAGGATTTTAGCTCTGATTCAAACGAGCAAGTCACC...TAGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp TTATCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACAGGCCACATTTCCCATaGTCAGCAATACAGATCCCT +
Preference number: 4 (lower is better)
Translates to: LSNSLPHSPVHSPNFLANRPHFP*SAIQIP
Trigger: AGGGATCTGTATTGCTGATCATGGGAAATGTGGCCT...GTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp CATTCTCTCTGTGTTCATGAAAATAGGCAATCCAATTTGCAAGTTTTCGAACCATTATTTGAACAGGACTaGGAGCAGGATGACCACACT +
Preference number: 4 (lower is better)
Translates to: HSLCVHENRQSNLQVFEPLFEQD*EQDDHT
Trigger: AGTGTGGTCATCCTGCTCTCAGTCCTGTTCAAATAA...TGGTTCGAAAACTTGCAAATTGGATTGCCTATTTTCATGAACACAGAGAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp TGGCAACCCATTCTCTCTGTGTTCATGAAAATAGGCAATCCAATTTGCAAGTTTATTACTTGTCCCACATaGCTCTTGATACAGAAGACC +
Preference number: 4 (lower is better)
Translates to: WQPILSVFMKIGNPICKFITCPT*LLIQKT
Trigger: GGTCTTCTGTATCAAGAGTCATGTGGGACAAGTAAT...AAACTTGCAAATTGGATTGCCTATTTTCATGAACACAGAGAGAATGGGTTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp AAGCATATTAGCATTTGCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATTCAAACTGATTCTTaGGATCCAGTTTGGGACATG +
Preference number: 4 (lower is better)
Translates to: KHISICTLQKRSRRGQVYIQTDS*DPVWDM
Trigger: CATGTCCCAAACTGGATCTCAAGAATCAGTTTGAAT...ATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGCAAATGCTAATATGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR TCA 90 bp TTATCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACTTGGCCACAGGTTTGTaGACACTCTGTCCATGTTGT +
Preference number: 4 (lower is better)
Translates to: LSNSLPHSPVHSPNFLANLATGL*TLCPCC
Trigger: ACAACATGGACAGAGTGTTCACAAACCTGTGGCCAA...GTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp TTATCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACGATTATGAATGTCCTTaGCCTAGATTGGCGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LSNSLPHSPVHSPNFLANDYECP*PRLAAC
Trigger: ACAGGCCGCCAATCTAGGTCAAGGACATTCATAATC...GTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR TCA 90 bp AAGGTAAAAACTCAGAGAACTTCTGAAATGGCAACCCATTCTCTCTGTGTTCATATCCAGGAAGCCACTTaGTCTCATTATCTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: KVKTQRTSEMATHSLCVHIQEAT*SHYLCV
Trigger: TACACAGAGATAATGAGATCAAGTGGCTTCCTGGAT...ATGAACACAGAGAGAATGGGTTGCCATTTCAGAAGTTCTCTGAGTTTTTACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp CACTATTACTTTTGTCATATTCGTATTCTGCCCAAGGTATCACATCATGAGATTACCAGGAAGATACTATaGAGTCCATCGAGCAAGGGA +
Preference number: 4 (lower is better)
Translates to: HYYFCHIRILPKVSHHEITRKIL*SPSSKG
Trigger: TCCCTTGCTCGATGGACTGCATAGTATCTTCCTGGT...AATCTCATGATGTGATACCTTGGGCAGAATACGAATATGACAAAAGTAATAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp CACTATTACTTTTGTCATATTCGTATTCTGCCCAAGGTATCACATCATGAGATTCAAGGCAGTCTTTCTTaGATGGGAGGAAACAAGGTC +
Preference number: 4 (lower is better)
Translates to: HYYFCHIRILPKVSHHEIQGSLS*MGGNKV
Trigger: GACCTTGTTTCCTCCCATGCAAGAAAGACTGCCTTG...AATCTCATGATGTGATACCTTGGGCAGAATACGAATATGACAAAAGTAATAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp GACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAATATTTTGTCTCAAGTTCCCATTGGCTGCTTCCTaGATGATAATCCTGTATCGA +
Preference number: 4 (lower is better)
Translates to: DQILDRNSLQKGIFCLKFPLAAS*MIILYR
Trigger: TCGATACAGGATTATCATCCAGGAAGCAGCCAATGG...GAACTTGAGACAAAATATTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp TATTTAAAGGTAAAAACTCAGAGAACTTCTGAAATGGCAACCCATTCTCTCTGTACACTCACTGTAACATaGGACTGCCTCATGAACCTG +
Preference number: 4 (lower is better)
Translates to: YLKVKTQRTSEMATHSLCTLTVT*DCLMNL
Trigger: CAGGTTCATGAGGCAGTCCCATGTTACAGTGAGTGT...ACAGAGAGAATGGGTTGCCATTTCAGAAGTTCTCTGAGTTTTTACCTTTAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp TCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACACTGATATTGAGCCATTGTaGACTACACAGGAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SNSLPHSPVHSPNFLANTDIEPL*TTQEKL
Trigger: CAGCTTCTCCTGTGTAGTCCACAATGGCTCAATATC...AGTGTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp AATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTTTCAGGATTCCTTCTTaGAAGGGTACTTCTCCACAC +
Preference number: 4 (lower is better)
Translates to: NFLANTLHISSGNYPIYSFRIPS*KGTSPH
Trigger: GTGTGGAGAAGTACCCTTCCAAGAAGGAATCCTGAA...AGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
3UTR CAA 72 bp ACTCCATGTCCAAATGAAGTTGGGGCACTATTACTTTaGTCATATTCGTATTCTGCCCAAGGTATCACATCA +
Preference number: 4 (lower is better)
Translates to: TPCPNEVGALLL*SYSYSAQGITS
Trigger: TGATGTGATACCTTGGGCAGAATACGAATATGACAAAAGTAATAGTGCCCCAACTTCATTTGGACATGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp CACTATTACTTTTGTCATATTCGTATTCTGCCCAAGGTATCACATCATGAGATTACACGAGTTCTATGCTaGAGTTTCTTCCCACATCCT +
Preference number: 4 (lower is better)
Translates to: HYYFCHIRILPKVSHHEITRVLC*SFFPHP
Trigger: AGGATGTGGGAAGAAACTGCAGCATAGAACTCGTGT...AATCTCATGATGTGATACCTTGGGCAGAATACGAATATGACAAAAGTAATAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp TCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACACTATTCCCCTTCAGCAATaGAGGTCTCTTTCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: SNSLPHSPVHSPNFLANTIPLQQ*RSLSQE
Trigger: TTCTTGAGAAAGAGACCTGCATTGCTGAAGGGGAAT...AGTGTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR GCA 90 bp CTCAGTTCTGTGACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAATATTTTGGTTATCATCAGAGATaGATGAGACAGCTCTTGTCT +
Preference number: 4 (lower is better)
Translates to: LSSVTKYLTEIACRREYFGYHQR*MRQLLS
Trigger: AGACAAGAGCTGTCTCATGCATCTCTGATGATAACC...AAAATATTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGTCACAGAACTGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR GCA 90 bp TCTGTGACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAATATTTTGTCTCAGCACTCTGTCATTTCTaGAGACTGGTTATCATCAGA +
Preference number: 4 (lower is better)
Translates to: SVTKYLTEIACRREYFVSALCHF*RLVIIR
Trigger: TCTGATGATAACCAGTCTGCAGAAATGACAGAGTGC...TGAGACAAAATATTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGTCACAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR GCA 90 bp TTATCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACACAGGGGATGACACATaGTTCCTGAATGTAACCAGA +
Preference number: 4 (lower is better)
Translates to: LSNSLPHSPVHSPNFLANTGDDT*FLNVTR
Trigger: TCTGGTTACATTCAGGAAGCATGTGTCATCCCCTGT...GTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp CTCAGTTCTGTGACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAATATTTTTTCTCCAGGAATACCTaGGACATGGTTGCAGAAATT +
Preference number: 4 (lower is better)
Translates to: LSSVTKYLTEIACRREYFFSRNT*DMVAEI
Trigger: AATTTCTGCAACCATGTCCCAGGTATTCCTGGAGAA...AAAATATTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGTCACAGAACTGAG
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CCA 90 bp GATCAAGTTTACTCAAGTCTGTGCGAAATCCTTCAGGTTCTCTTCCTCTCATTTTCTGTCAGATTGTACTaGAACTGGAAACAGTTTTCA +
Preference number: 4 (lower is better)
Translates to: DQVYSSLCEILQVLFLSFSVRLY*NWKQFS
Trigger: TGAAAACTGTTTCCAGTTCCAGTACAATCTGACAGA...AAATGAGAGGAAGAGAACCTGAAGGATTTCGCACAGACTTGAGTAAACTTGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp CACTATTACTTTTGTCATATTCGTATTCTGCCCAAGGTATCACATCATGAGATTTCTGGGTCCAGAGGTTaGAGAGACCATCCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: HYYFCHIRILPKVSHHEISGSRG*RDHPLK
Trigger: TTTTAAAGGATGGTCTCTCCAACCTCTGGACCCAGA...AATCTCATGATGTGATACCTTGGGCAGAATACGAATATGACAAAAGTAATAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp CATTCTCTCTGTGTTCATGAAAATAGGCAATCCAATTTGCAAGTTTTCGAACCAATTATTGATCTTGCATaGAGACCAGTGTTCTACGAC +
Preference number: 4 (lower is better)
Translates to: HSLCVHENRQSNLQVFEPIIDLA*RPVFYD
Trigger: GTCGTAGAACACTGGTCTCCATGCAAGATCAATAAT...TGGTTCGAAAACTTGCAAATTGGATTGCCTATTTTCATGAACACAGAGAGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp ATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTAACCTTCTCCTTGGGTTaGCATAATGATAAATCGAGT +
Preference number: 4 (lower is better)
Translates to: ISLLTLCTFHLETTQFTLTFSLG*HNDKSS
Trigger: ACTCGATTTATCATTATGCCAACCCAAGGAGAAGGT...TAGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp TCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACACTTGTCGACCTTCTCCTTaGGTTGGCATAATGATAAAT +
Preference number: 4 (lower is better)
Translates to: SNSLPHSPVHSPNFLANTCRPSP*VGIMIN
Trigger: ATTTATCATTATGCCAACCCAAGGAGAAGGTCGACA...AGTGTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp AATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTGCTTTGATGTGGTTTTaGCTTCTTGCAAACAAGATA +
Preference number: 4 (lower is better)
Translates to: NFLANTLHISSGNYPIYSALMWF*LLANKI
Trigger: TATCTTGTTTGCAAGAAGCCAAAACCACATCAAAGC...AGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CCA 90 bp TATTTAAAGGTAAAAACTCAGAGAACTTCTGAAATGGCAACCCATTCTCTCTGTGTCTTCCATTTATATTaGAGCATGCTATTGCTCGAA +
Preference number: 4 (lower is better)
Translates to: YLKVKTQRTSEMATHSLCVFHLY*SMLLLE
Trigger: TTCGAGCAATAGCATGCTCCAATATAAATGGAAGAC...ACAGAGAGAATGGGTTGCCATTTCAGAAGTTCTCTGAGTTTTTACCTTTAAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CCA 90 bp TGCTGTGCAGTCACACATTCCACAGCCCGAGGCCTGGGCTCACCTTaGGCCCCAGGAACCAGAAGGCAGCGATGCCAGTCGGAAACCTCC +
Preference number: 5 (lower is better)
Translates to: CCAVTHSTARGLGSP*APGTRRQRCQSETS
Trigger: GGAGGTTTCCGACTGGCATCGCTGCCTTCTGGTTCCTGGGGCCCAAGGTGAGCCCAGGCCTCGGGCTGTGGAATGTGTGACTGCACAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS CCA 90 bp GCTGTAGACCGTGCTGTGCAGTCACACATTCCACAGCCCGAGGCCTaGGCTCACCTTGGGCCCCAGGAACCAGAAGGCAGCGATGCCAGT +
Preference number: 5 (lower is better)
Translates to: AVDRAVQSHIPQPEA*AHLGPQEPEGSDAS
Trigger: ACTGGCATCGCTGCCTTCTGGTTCCTGGGGCCCAAGGTGAGCCCAGGCCTCGGGCTGTGGAATGTGTGACTGCACAGCACGGTCTACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS GCA 90 bp GCACCATACAGCACGACTTTGGGCTCCGCCTGGTCCGCAGTCACCTaGACACCTTCCCCAGGGACCGGTTTTCCAGAGGAACTGATTGTC +
Preference number: 5 (lower is better)
Translates to: APYSTTLGSAWSAVT*TPSPGTGFPEELIV
Trigger: GACAATCAGTTCCTCTGGAAAACCGGTCCCTGGGGAAGGTGTGCAGGTGACTGCGGACCAGGCGGAGCCCAAAGTCGTGCTGTATGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 90 bp GCCCCAGGAACCAGAAGGCAGCGATGCCAGTCGGAAACCTCCCACTaGAACAGGTCACTGTGCCAGTCACACACGCGGAAACAGCTCCTT +
Preference number: 5 (lower is better)
Translates to: APGTRRQRCQSETSH*NRSLCQSHTRKQLL
Trigger: AAGGAGCTGTTTCCGCGTGTGTGACTGGCACAGTGACCTGTTCCAGTGGGAGGTTTCCGACTGGCATCGCTGCCTTCTGGTTCCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS TCA 90 bp TCCTCTGGGGTTTTTCCAGATTACGCTGCTCGCAGTGGTCCATGCTaGCAGACTTGCCATCACTGCGCACACAGCTCAGCAGGCGGGTCC +
Preference number: 5 (lower is better)
Translates to: SSGVFPDYAARSGPC*QTCHHCAHSSAGGS
Trigger: GGACCCGCCTGCTGAGCTGTGTGCGCAGTGATGGCAAGTCTGTCAGCATGGACCACTGCGAGCAGCGTAATCTGGAAAAACCCCAGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS TCA 90 bp TTCTCCACACAGGGCCTCCTCCACAGGGACAGCCGTGTGGGATATTaGGCCATTGTGGACTACACAGGAGAAGCTGCGCACCTGGACTCC +
Preference number: 5 (lower is better)
Translates to: FSTQGLLHRDSRVGY*AIVDYTGEAAHLDS
Trigger: GGAGTCCAGGTGCGCAGCTTCTCCTGTGTAGTCCACAATGGCTCAATATCCCACACGGCTGTCCCTGTGGAGGAGGCCCTGTGTGGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS GCA 90 bp GAAACTGGAGCCTCGCAGGCTCTGGACTCCGTGAGATTTGGACACTaGAGACCTCCATACAGAGGGGGCGCGATGGCCACACGAGTTCTA +
Preference number: 5 (lower is better)
Translates to: ETGASQALDSVRFGH*RPPYRGGAMATRVL
Trigger: TAGAACTCGTGTGGCCATCGCGCCCCCTCTGTATGGAGGTCTGCAGTGTCCAAATCTCACGGAGTCCAGAGCCTGCGAGGCTCCAGTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS CCA 90 bp CCCTTCTATGTGAAAGCACCATACAGCACGACTTTGGGCTCCGCCTaGTCCGCAGTCACCTGCACACCTTCCCCAGGGACCGGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: PFYVKAPYSTTLGSA*SAVTCTPSPGTGFP
Trigger: TGGAAAACCGGTCCCTGGGGAAGGTGTGCAGGTGACTGCGGACCAGGCGGAGCCCAAAGTCGTGCTGTATGGTGCTTTCACATAGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 90 bp GTGTCCTTTCCACGGGCCTGGAGACTTCCTTGGTCCTTGATGCAATaGTTGCTGGTAGGCTCTGGGCACAGTACACCTCCCGGGTCTGGA +
Preference number: 5 (lower is better)
Translates to: VSFPRAWRLPWSLMQ*LLVGSGHSTPPGSG
Trigger: TCCAGACCCGGGAGGTGTACTGTGCCCAGAGCCTACCAGCAACCATTGCATCAAGGACCAAGGAAGTCTCCAGGCCCGTGGAAAGGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 90 bp TCTCCTGGGCAAGGCACAGAGCACAGCTGCTTCAGGATTCCTTCTTaGAAGGGTACTTCTCCACACAGGGCCTCCTCCACAGGGACAGCC +
Preference number: 5 (lower is better)
Translates to: SPGQGTEHSCFRIPS*KGTSPHRASSTGTA
Trigger: GGCTGTCCCTGTGGAGGAGGCCCTGTGTGGAGAAGTACCCTTCCAAGAAGGAATCCTGAAGCAGCTGTGCTCTGTGCCTTGCCCAGGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS GCA 90 bp AGGCAGCGATGCCAGTCGGAAACCTCCCACTGGAACAGGTCACTGTaGCAGTCACACACGCGGAAACAGCTCCTTTCCTTTGGAGGTTGG +
Preference number: 5 (lower is better)
Translates to: RQRCQSETSHWNRSL*QSHTRKQLLSFGGW
Trigger: CCAACCTCCAAAGGAAAGGAGCTGTTTCCGCGTGTGTGACTGGCACAGTGACCTGTTCCAGTGGGAGGTTTCCGACTGGCATCGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS GCA 90 bp GGCAAGCCAGCGATGACACATTGGATCCTCACAAGGTACAGATTCTaGCAGATGAGGGCAGCGCCCCATGGGCCCTGTAGACTCCATGAG +
Preference number: 5 (lower is better)
Translates to: GKPAMTHWILTRYRF*QMRAAPHGPCRLHE
Trigger: CTCATGGAGTCTACAGGGCCCATGGGGCGCTGCCCTCATCTGGCAGAATCTGTACCTTGTGAGGATCCAATGTGTCATCGCTGGCTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS GCA 90 bp CAAGGGGTGAAGGTGCAGTCGTCCCGACAGGGAATGGTGCATTCCTaGACAAGGGGAGGCATGCCATTCATCTGCTTGAGGCACTCTGTC +
Preference number: 5 (lower is better)
Translates to: QGVKVQSSRQGMVHS*TRGGMPFICLRHSV
Trigger: GACAGAGTGCCTCAAGCAGATGAATGGCATGCCTCCCCTTGTGCAGGAATGCACCATTCCCTGTCGGGACGACTGCACCTTCACCCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 90 bp AGGCTGAGGGGGCAGGTCCCAAGCATAGTGTCCTTTCCACGGGCCTaGAGACTTCCTTGGTCCTTGATGCAATGGTTGCTGGTAGGCTCT +
Preference number: 5 (lower is better)
Translates to: RLRGQVPSIVSFPRA*RLPWSLMQWLLVGS
Trigger: AGAGCCTACCAGCAACCATTGCATCAAGGACCAAGGAAGTCTCCAGGCCCGTGGAAAGGACACTATGCTTGGGACCTGCCCCCTCAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 90 bp AGGGCCTCCTCCACAGGGACAGCCGTGTGGGATATTGAGCCATTGTaGACTACACAGGAGAAGCTGCGCACCTGGACTCCTTCTCCACAA +
Preference number: 5 (lower is better)
Translates to: RASSTGTAVWDIEPL*TTQEKLRTWTPSPQ
Trigger: TTGTGGAGAAGGAGTCCAGGTGCGCAGCTTCTCCTGTGTAGTCCACAATGGCTCAATATCCCACACGGCTGTCCCTGTGGAGGAGGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CCA 90 bp AAGGGTACTTCTCCACACAGGGCCTCCTCCACAGGGACAGCCGTGTaGGATATTGAGCCATTGTGGACTACACAGGAGAAGCTGCGCACC +
Preference number: 5 (lower is better)
Translates to: KGTSPHRASSTGTAV*DIEPLWTTQEKLRT
Trigger: GGTGCGCAGCTTCTCCTGTGTAGTCCACAATGGCTCAATATCCCACACGGCTGTCCCTGTGGAGGAGGCCCTGTGTGGAGAAGTACCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS GCA 90 bp GTCTGCAGCCCCTTCCCACATGCCTCACTGGTGCCTGTTCTCCCCTaGCTGATAGACTCTGGAACCAGGATACAAGAGCTCCATTTCTGC +
Preference number: 5 (lower is better)
Translates to: VCSPFPHASLVPVLP*LIDSGTRIQELHFC
Trigger: GCAGAAATGGAGCTCTTGTATCCTGGTTCCAGAGTCTATCAGGCAGGGGAGAACAGGCACCAGTGAGGCATGTGGGAAGGGGCTGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 90 bp CCCACATGCCTCACTGGTGCCTGTTCTCCCCTGCCTGATAGACTCTaGAACCAGGATACAAGAGCTCCATTTCTGCGGCTTCCACCGGTA +
Preference number: 5 (lower is better)
Translates to: PTCLTGACSPLPDRL*NQDTRAPFLRLPPV
Trigger: TACCGGTGGAAGCCGCAGAAATGGAGCTCTTGTATCCTGGTTCCAGAGTCTATCAGGCAGGGGAGAACAGGCACCAGTGAGGCATGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 90 bp TTCAGTGAGGGCCTCAGCAGATGCCGAGTTCTTCTCTGCATTGCATaGGGGTCACATGACTGTGGGCATCTGCTCCATGTTCCCCACTCG +
Preference number: 5 (lower is better)
Translates to: FSEGLSRCRVLLCIA*GSHDCGHLLHVPHS
Trigger: CGAGTGGGGAACATGGAGCAGATGCCCACAGTCATGTGACCCCCATGCAATGCAGAGAAGAACTCGGCATCTGCTGAGGCCCTCACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CCA 90 bp ACATGCAGACCAGTTGCCAAGGACCCAACTATAGCAGGGTGTCACTaGGCAGGGTTTCTGCTGGGTGAGTTCTGTGGGGCATTGTCGACC +
Preference number: 5 (lower is better)
Translates to: TCRPVAKDPTIAGCH*AGFLLGEFCGALST
Trigger: GGTCGACAATGCCCCACAGAACTCACCCAGCAGAAACCCTGCCCAGTGACACCCTGCTATAGTTGGGTCCTTGGCAACTGGTCTGCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS GCA 90 bp TCTGCAGACTGGTTATCATCAGAGATGCATGAGACAGCTCTTGTCTaGAGCCCCTTCCCACATGCCTCACTGGTGCCTGTTCTCCCCTGC +
Preference number: 5 (lower is better)
Translates to: SADWLSSEMHETALV*SPFPHASLVPVLPC
Trigger: GCAGGGGAGAACAGGCACCAGTGAGGCATGTGGGAAGGGGCTGCAGACAAGAGCTGTCTCATGCATCTCTGATGATAACCAGTCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS GCA 90 bp GCGCACCTGGACTCCTTCTCCACAATCTCCGCCCTCCAATTTACATaGAGACCAGTTGCCAAGGACCCAACTATAGCAGGGTGTCACTGG +
Preference number: 5 (lower is better)
Translates to: AHLDSFSTISALQFT*RPVAKDPTIAGCHW
Trigger: CCAGTGACACCCTGCTATAGTTGGGTCCTTGGCAACTGGTCTGCATGTAAATTGGAGGGCGGAGATTGTGGAGAAGGAGTCCAGGTGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CCA 90 bp CTGTGCCAGTCACACACGCGGAAACAGCTCCTTTCCTTTGGAGGTTaGCTGCTCTCATCACAGTTCGACATGGGACTCGTCCACCCTTCT +
Preference number: 5 (lower is better)
Translates to: LCQSHTRKQLLSFGG*LLSSQFDMGLVHPS
Trigger: AGAAGGGTGGACGAGTCCCATGTCGAACTGTGATGAGAGCAGCCAACCTCCAAAGGAAAGGAGCTGTTTCCGCGTGTGTGACTGGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 90 bp CAGGTCACTGTGCCAGTCACACACGCGGAAACAGCTCCTTTCCTTTaGAGGTTGGCTGCTCTCATCACAGTTCGACATGGGACTCGTCCA +
Preference number: 5 (lower is better)
Translates to: QVTVPVTHAETAPFL*RLAALITVRHGTRP
Trigger: TGGACGAGTCCCATGTCGAACTGTGATGAGAGCAGCCAACCTCCAAAGGAAAGGAGCTGTTTCCGCGTGTGTGACTGGCACAGTGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 90 bp CAGGTCCCAAGCATAGTGTCCTTTCCACGGGCCTGGAGACTTCCTTaGTCCTTGATGCAATGGTTGCTGGTAGGCTCTGGGCACAGTACA +
Preference number: 5 (lower is better)
Translates to: QVPSIVSFPRAWRLP*SLMQWLLVGSGHST
Trigger: TGTACTGTGCCCAGAGCCTACCAGCAACCATTGCATCAAGGACCAAGGAAGTCTCCAGGCCCGTGGAAAGGACACTATGCTTGGGACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 90 bp CACTCGGACATGACACACTCACTGGGACACAGAAGAGAACAGGCCTaGGTTTCTTGGGGAGCATCATCCTGGTTGCACAGGCTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: HSDMTHSLGHRREQA*VSWGASSWLHRLLF
Trigger: GAACAGGAGCCTGTGCAACCAGGATGATGCTCCCCAAGAAACCCAGGCCTGTTCTCTTCTGTGTCCCAGTGAGTGTGTCATGTCCGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CCA 90 bp CTGCTGGGTGAGTTCTGTGGGGCATTGTCGACCTTCTCCTTGGGTTaGCATAATGATAAATCGAGTCCGGCTCATGCGACCTCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: LLGEFCGALSTFSLG*HNDKSSPAHATSLA
Trigger: GGCCAAGGAGGTCGCATGAGCCGGACTCGATTTATCATTATGCCAACCCAAGGAGAAGGTCGACAATGCCCCACAGAACTCACCCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS TCA 90 bp AGGGCGTTTCTTCCATCACTTCTGGTACACCACACCTGCCTGGTTTaGAACCCTATCACTACATCCCCAGGCTGGGAGTGGTGGTGTGCT +
Preference number: 5 (lower is better)
Translates to: RAFLPSLLVHHTCLV*NPITTSPGWEWWCA
Trigger: AGCACACCACCACTCCCAGCCTGGGGATGTAGTGATAGGGTTTCAAACCAGGCAGGTGTGGTGTACCAGAAGTGATGGAAGAAACGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS TCA 90 bp CAGGAAGATACTATGCAGTCCATCGAGCAAGGGACATTGCAAAGCTaGGAGGCTGAGGGGGCAGGTCCCAAGCATAGTGTCCTTTCCACG +
Preference number: 5 (lower is better)
Translates to: QEDTMQSIEQGTLQS*EAEGAGPKHSVLST
Trigger: CGTGGAAAGGACACTATGCTTGGGACCTGCCCCCTCAGCCTCTCAGCTTTGCAATGTCCCTTGCTCGATGGACTGCATAGTATCTTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS GCA 90 bp GCCAGTCACACACGCGGAAACAGCTCCTTTCCTTTGGAGGTTGGCTaGTCTCATCACAGTTCGACATGGGACTCGTCCACCCTTCTATGT +
Preference number: 5 (lower is better)
Translates to: ASHTRGNSSFPLEVG*SHHSSTWDSSTLLC
Trigger: ACATAGAAGGGTGGACGAGTCCCATGTCGAACTGTGATGAGAGCAGCCAACCTCCAAAGGAAAGGAGCTGTTTCCGCGTGTGTGACTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS GCA 90 bp TACTGGAACTGGAAACAGTTTTCATTGAGGAGGCAGGGCCGCACCTaGGAGTCTTCCCCACAAGTTCTTGAGTTCAGTGAGGGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: YWNWKQFSLRRQGRT*ESSPQVLEFSEGLS
Trigger: GCTGAGGCCCTCACTGAACTCAAGAACTTGTGGGGAAGACTCGCAGGTGCGGCCCTGCCTCCTCAATGAAAACTGTTTCCAGTTCCAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS GCA 90 bp CAGCCGTGTGGGATATTGAGCCATTGTGGACTACACAGGAGAAGCTaGGCACCTGGACTCCTTCTCCACAATCTCCGCCCTCCAATTTAC +
Preference number: 5 (lower is better)
Translates to: QPCGILSHCGLHRRS*APGLLLHNLRPPIY
Trigger: GTAAATTGGAGGGCGGAGATTGTGGAGAAGGAGTCCAGGTGCGCAGCTTCTCCTGTGTAGTCCACAATGGCTCAATATCCCACACGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CCA 90 bp ATCAGCAATACAGATCCCTTCCGAGGCAAGCCAGCGATGACACATTaGATCCTCACAAGGTACAGATTCTGCCAGATGAGGGCAGCGCCC +
Preference number: 5 (lower is better)
Translates to: ISNTDPFRGKPAMTH*ILTRYRFCQMRAAP
Trigger: GGGCGCTGCCCTCATCTGGCAGAATCTGTACCTTGTGAGGATCCAATGTGTCATCGCTGGCTTGCCTCGGAAGGGATCTGTATTGCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 90 bp GGAATACTCATCCTCTGGGGTTTTTCCAGATTACGCTGCTCGCAGTaGTCCATGCTGACAGACTTGCCATCACTGCGCACACAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: GILILWGFSRLRCSQ*SMLTDLPSLRTQLS
Trigger: GCTGAGCTGTGTGCGCAGTGATGGCAAGTCTGTCAGCATGGACCACTGCGAGCAGCGTAATCTGGAAAAACCCCAGAGGATGAGTATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp CCATCAGGGTCCTCATGCACACACACCCAGAAGCAAGCTGGATTAGCCCCCAACCCTTTCCTTTGGAGGTaGGCTGCTCTCATCACAGTT +
Preference number: 5 (lower is better)
Translates to: PSGSSCTHTQKQAGLAPNPFLWR*AALITV
Trigger: AACTGTGATGAGAGCAGCCAACCTCCAAAGGAAAGG...GTTGGGGGCTAATCCAGCTTGCTTCTGGGTGTGTGTGCATGAGGACCCTGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CAA 90 bp GCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTCAGTTCTGTGACAGGCCTGGGCTCACCTaGGGCCCCAGGAACCAGAAG +
Preference number: 5 (lower is better)
Translates to: AHCKREAEGVRYISQFCDRPGLT*GPRNQK
Trigger: CTTCTGGTTCCTGGGGCCCAAGGTGAGCCCAGGCCT...GTCACAGAACTGAGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS GCA 90 bp ACCAGACAGGGAATACTCATCCTCTGGGGTTTTTCCAGATTACGCTaGTCGCAGTGGTCCATGCTGACAGACTTGCCATCACTGCGCACA +
Preference number: 5 (lower is better)
Translates to: TRQGILILWGFSRLR*SQWSMLTDLPSLRT
Trigger: TGTGCGCAGTGATGGCAAGTCTGTCAGCATGGACCACTGCGAGCAGCGTAATCTGGAAAAACCCCAGAGGATGAGTATTCCCTGTCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS GCA 90 bp CTCCTTCTCCACAATCTCCGCCCTCCAATTTACATGCAGACCAGTTaGCAAGGACCCAACTATAGCAGGGTGTCACTGGGCAGGGTTTCT +
Preference number: 5 (lower is better)
Translates to: LLLHNLRPPIYMQTS*QGPNYSRVSLGRVS
Trigger: AGAAACCCTGCCCAGTGACACCCTGCTATAGTTGGGTCCTTGGCAACTGGTCTGCATGTAAATTGGAGGGCGGAGATTGTGGAGAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CCA 90 bp GGTTTCTGCTGGGTGAGTTCTGTGGGGCATTGTCGACCTTCTCCTTaGGTTGGCATAATGATAAATCGAGTCCGGCTCATGCGACCTCCT +
Preference number: 5 (lower is better)
Translates to: GFCWVSSVGHCRPSP*VGIMINRVRLMRPP
Trigger: AGGAGGTCGCATGAGCCGGACTCGATTTATCATTATGCCAACCCAAGGAGAAGGTCGACAATGCCCCACAGAACTCACCCAGCAGAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS TCA 90 bp GAGGCACTCTGTCATTTCTGCAGACTGGTTATCATCAGAGATGCATaGGACAGCTCTTGTCTGCAGCCCCTTCCCACATGCCTCACTGGT +
Preference number: 5 (lower is better)
Translates to: EALCHFCRLVIIRDA*DSSCLQPLPTCLTG
Trigger: ACCAGTGAGGCATGTGGGAAGGGGCTGCAGACAAGAGCTGTCTCATGCATCTCTGATGATAACCAGTCTGCAGAAATGACAGAGTGCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS TCA 90 bp TGCTCCACTCTGTCAGATTGTACTGGAACTGGAAACAGTTTTCATTaGGGAGGCAGGGCCGCACCTGCGAGTCTTCCCCACAAGTTCTTG +
Preference number: 5 (lower is better)
Translates to: CSTLSDCTGTGNSFH*GGRAAPASLPHKFL
Trigger: CAAGAACTTGTGGGGAAGACTCGCAGGTGCGGCCCTGCCTCCTCAATGAAAACTGTTTCCAGTTCCAGTACAATCTGACAGAGTGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CCA 90 bp AGCTCCTTTCCTTTGGAGGTTGGCTGCTCTCATCACAGTTCGACATaGGACTCGTCCACCCTTCTATGTGAAAGCACCATACAGCACGAC +
Preference number: 5 (lower is better)
Translates to: SSFPLEVGCSHHSST*DSSTLLCESTIQHD
Trigger: GTCGTGCTGTATGGTGCTTTCACATAGAAGGGTGGACGAGTCCCATGTCGAACTGTGATGAGAGCAGCCAACCTCCAAAGGAAAGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 90 bp TTAACAGGGCGTTTCTTCCATCACTTCTGGTACACCACACCTGCCTaGTTTGAAACCCTATCACTACATCCCCAGGCTGGGAGTGGTGGT +
Preference number: 5 (lower is better)
Translates to: LTGRFFHHFWYTTPA*FETLSLHPQAGSGG
Trigger: ACCACCACTCCCAGCCTGGGGATGTAGTGATAGGGTTTCAAACCAGGCAGGTGTGGTGTACCAGAAGTGATGGAAGAAACGCCCTGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS CCA 90 bp GGTCTGGATCCCACCACCACAGATTGGTCCTGTCTCATGCCAAAGTaGATCGTGTTGCTCCAGAAGAAGAGAGACTTGGCATTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: GLDPTTTDWSCLMPK*IVLLQKKRDLAFLP
Trigger: TGGAAGGAATGCCAAGTCTCTCTTCTTCTGGAGCAACACGATCCACTTTGGCATGAGACAGGACCAATCTGTGGTGGTGGGATCCAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS-3UTR CAA 90 bp TACAGTGTCAGACTCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGGGTGTCTGGGCACTCTaGACCCCCATTGGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: YSVRLAIYSKCLDWTFLWGVWAL*TPIGCF
Trigger: GAAGCAGCCAATGGGGGTCAAGAGTGCCCAGACACC...CCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGACACTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp ATGCTATCCTGTGCTACCCTCCATCAGGGTCCTCATGCACACACACCCAGAAGCTTCTTTGTCATCTCCTaGCACCCACAATCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: MLSCATLHQGPHAHTPRSFFVIS*HPQSSL
Trigger: CAAGGAGGATTGTGGGTGCAAGGAGATGACAAAGAA...GCTTCTGGGTGTGTGTGCATGAGGACCCTGATGGAGGGTAGCACAGGATAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS TCA 90 bp GAGGAGCAAAGTGTTCACAGATCTCATTGGACACCATGGTTCTATTaGGCTTCTGAAGACAGCGCACTGTCCGGTGCTGTAGACCGTGCT +
Preference number: 5 (lower is better)
Translates to: EEQSVHRSHWTPWFY*ASEDSALSGAVDRA
Trigger: AGCACGGTCTACAGCACCGGACAGTGCGCTGTCTTCAGAAGCTCAATAGAACCATGGTGTCCAATGAGATCTGTGAACACTTTGCTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS TCA 90 bp CCCAGCTGGACCAGTCACTTAGCTTGCAATCAAACGGACAGGGGATaGCACATGCTTCCTGAATGTAACCAGAGCTGTTGCAGAATGAGG +
Preference number: 5 (lower is better)
Translates to: PSWTSHLACNQTDRG*HMLPECNQSCCRMR
Trigger: CCTCATTCTGCAACAGCTCTGGTTACATTCAGGAAGCATGTGTCATCCCCTGTCCGTTTGATTGCAAGCTAAGTGACTGGTCCAGCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS TCA 90 bp ATCCTCCGAGCCAGGCACCTTCATGCAGTAATCCAGGAAGCCACTTaGTCTCATTATCTCTGTGTATCCCTTCTCACAGCCACAGACTCC +
Preference number: 5 (lower is better)
Translates to: ILRARHLHAVIQEAT*SHYLCVSLLTATDS
Trigger: GGAGTCTGTGGCTGTGAGAAGGGATACACAGAGATAATGAGATCAAGTGGCTTCCTGGATTACTGCATGAAGGTGCCTGGCTCGGAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS GCA 90 bp TCCAGGAATACCTGGGACATGGTTGCAGAAATTCCCCTTCAGCAATaGAGGTCTCTTTCTCAAGAAGTTCTGGGCATTCCTGGCCACCTC +
Preference number: 5 (lower is better)
Translates to: SRNTWDMVAEIPLQQ*RSLSQEVLGIPGHL
Trigger: GAGGTGGCCAGGAATGCCCAGAACTTCTTGAGAAAGAGACCTGCATTGCTGAAGGGGAATTTCTGCAACCATGTCCCAGGTATTCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS GCA 90 bp CCCTGCCTGATAGACTCTGGAACCAGGATACAAGAGCTCCATTTCTaGGGCTTCCACCGGTATGAAGGACACAGTGAGATATCTTCACAC +
Preference number: 5 (lower is better)
Translates to: PCLIDSGTRIQELHF*GFHRYEGHSEISSH
Trigger: GTGTGAAGATATCTCACTGTGTCCTTCATACCGGTGGAAGCCGCAGAAATGGAGCTCTTGTATCCTGGTTCCAGAGTCTATCAGGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS GCA 90 bp CAGGGAATGGTGCATTCCTGCACAAGGGGAGGCATGCCATTCATCTaGTTGAGGCACTCTGTCATTTCTGCAGACTGGTTATCATCAGAG +
Preference number: 5 (lower is better)
Translates to: QGMVHSCTRGGMPFI*LRHSVISADWLSSE
Trigger: CTCTGATGATAACCAGTCTGCAGAAATGACAGAGTGCCTCAAGCAGATGAATGGCATGCCTCCCCTTGTGCAGGAATGCACCATTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 90 bp CCTTCAGCAATGCAGGTCTCTTTCTCAAGAAGTTCTGGGCATTCCTaGCCACCTCCAATAGCAATATGCTTCACGTTCCGGCTCCTGCTT +
Preference number: 5 (lower is better)
Translates to: PSAMQVSFSRSSGHS*PPPIAICFTFRLLL
Trigger: AAGCAGGAGCCGGAACGTGAAGCATATTGCTATTGGAGGTGGCCAGGAATGCCCAGAACTTCTTGAGAAAGAGACCTGCATTGCTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS CCA 90 bp GGCATGCCATTCATCTGCTTGAGGCACTCTGTCATTTCTGCAGACTaGTTATCATCAGAGATGCATGAGACAGCTCTTGTCTGCAGCCCC +
Preference number: 5 (lower is better)
Translates to: GMPFICLRHSVISAD*LSSEMHETALVCSP
Trigger: GGGGCTGCAGACAAGAGCTGTCTCATGCATCTCTGATGATAACCAGTCTGCAGAAATGACAGAGTGCCTCAAGCAGATGAATGGCATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS TCA 90 bp GAATGGTGCATTCCTGCACAAGGGGAGGCATGCCATTCATCTGCTTaGGGCACTCTGTCATTTCTGCAGACTGGTTATCATCAGAGATGC +
Preference number: 5 (lower is better)
Translates to: EWCIPAQGEACHSSA*GTLSFLQTGYHQRC
Trigger: GCATCTCTGATGATAACCAGTCTGCAGAAATGACAGAGTGCCTCAAGCAGATGAATGGCATGCCTCCCCTTGTGCAGGAATGCACCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS TCA 90 bp CCACAGGTTTGTGAACACTCTGTCCATGTTGTCCATCCTGAGAGCTaGCAGTTGACCACACATTCCACCAGACAGGGAATACTCATCCTC +
Preference number: 5 (lower is better)
Translates to: PQVCEHSVHVVHPES*QLTTHSTRQGILIL
Trigger: GAGGATGAGTATTCCCTGTCTGGTGGAATGTGTGGTCAACTGTCAGCTCTCAGGATGGACAACATGGACAGAGTGTTCACAAACCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS GCA 90 bp CCACCACCACAGATTGGTCCTGTCTCATGCCAAAGTGGATCGTGTTaGTCCAGAAGAAGAGAGACTTGGCATTCCTTCCATTCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: PPPQIGPVSCQSGSC*SRRRETWHSFHSEV
Trigger: AACCTCTGAATGGAAGGAATGCCAAGTCTCTCTTCTTCTGGAGCAACACGATCCACTTTGGCATGAGACAGGACCAATCTGTGGTGGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS-3UTR CAA 90 bp TTTGCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTCAGTTCTGTGGTGTCTGGGCACTCTaGACCCCCATTGGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: FAHCKREAEGVRYISQFCGVWAL*TPIGCF
Trigger: GAAGCAGCCAATGGGGGTCAAGAGTGCCCAGACACC...ACAGAACTGAGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CAA 90 bp TACAGTGTCAGACTCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGACAGGCCTGGGTTTCTaGGGGAGCATCATCCTGGTT +
Preference number: 5 (lower is better)
Translates to: YSVRLAIYSKCLDWTFLWTGLGF*GSIILV
Trigger: AACCAGGATGATGCTCCCCAAGAAACCCAGGCCTGT...CCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGACACTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS GCA 90 bp TTCTCAAGAAGTTCTGGGCATTCCTGGCCACCTCCAATAGCAATATaGTTCACGTTCCGGCTCCTGCTTCTAACTCCAGGTGATAAAGTC +
Preference number: 5 (lower is better)
Translates to: FSRSSGHSWPPPIAI*FTFRLLLLTPGDKV
Trigger: GACTTTATCACCTGGAGTTAGAAGCAGGAGCCGGAACGTGAAGCATATTGCTATTGGAGGTGGCCAGGAATGCCCAGAACTTCTTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS GCA 90 bp CTGATACTTCTTCTCCTCGCTCATTCTGACAGACAGCCTTCAGAATaGGATGTCCCAGGCCACATTTCCCATGATCAGCAATACAGATCC +
Preference number: 5 (lower is better)
Translates to: LILLLLAHSDRQPSE*DVPGHISHDQQYRS
Trigger: GGATCTGTATTGCTGATCATGGGAAATGTGGCCTGGGACATCGCATTCTGAAGGCTGTCTGTCAGAATGAGCGAGGAGAAGAAGTATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 90 bp CAGAAATTCCCCTTCAGCAATGCAGGTCTCTTTCTCAAGAAGTTCTaGGCATTCCTGGCCACCTCCAATAGCAATATGCTTCACGTTCCG +
Preference number: 5 (lower is better)
Translates to: QKFPFSNAGLFLKKF*AFLATSNSNMLHVP
Trigger: CGGAACGTGAAGCATATTGCTATTGGAGGTGGCCAGGAATGCCCAGAACTTCTTGAGAAAGAGACCTGCATTGCTGAAGGGGAATTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS CCA 90 bp GAGAGACTTGGCATTCCTTCCATTCAGAGGTTCTCCAGGAATACCTaGGACATGGTTGCAGAAATTCCCCTTCAGCAATGCAGGTCTCTT +
Preference number: 5 (lower is better)
Translates to: ERLGIPSIQRFSRNT*DMVAEIPLQQCRSL
Trigger: AAGAGACCTGCATTGCTGAAGGGGAATTTCTGCAACCATGTCCCAGGTATTCCTGGAGAACCTCTGAATGGAAGGAATGCCAAGTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS CCA 90 bp GTCTCATGCCAAAGTGGATCGTGTTGCTCCAGAAGAAGAGAGACTTaGCATTCCTTCCATTCAGAGGTTCTCCAGGAATACCTGGGACAT +
Preference number: 5 (lower is better)
Translates to: VSCQSGSCCSRRRET*HSFHSEVLQEYLGH
Trigger: ATGTCCCAGGTATTCCTGGAGAACCTCTGAATGGAAGGAATGCCAAGTCTCTCTTCTTCTGGAGCAACACGATCCACTTTGGCATGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS CCA 90 bp AGATTGTTTTATTGTAGTATTTCCTGGCTGGCAGGGCCGTGGGCATaGTGTCCACTCACTGAAAGCAGTCACAAGGCAGTCTTTCTTGCA +
Preference number: 5 (lower is better)
Translates to: RLFYCSISWLAGPWA*CPLTESSHKAVFLA
Trigger: TGCAAGAAAGACTGCCTTGTGACTGCTTTCAGTGAGTGGACACCATGCCCACGGCCCTGCCAGCCAGGAAATACTACAATAAAACAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 90 bp GTATCGAGATTGTTTTATTGTAGTATTTCCTGGCTGGCAGGGCCGTaGGCATGGTGTCCACTCACTGAAAGCAGTCACAAGGCAGTCTTT +
Preference number: 5 (lower is better)
Translates to: VSRLFYCSISWLAGP*AWCPLTESSHKAVF
Trigger: AAAGACTGCCTTGTGACTGCTTTCAGTGAGTGGACACCATGCCCACGGCCCTGCCAGCCAGGAAATACTACAATAAAACAATCTCGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp TCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACACTAGGCCTGGGCTCACCTaGGGCCCCAGGAACCAGAAG +
Preference number: 5 (lower is better)
Translates to: SNSLPHSPVHSPNFLANTRPGLT*GPRNQK
Trigger: CTTCTGGTTCCTGGGGCCCAAGGTGAGCCCAGGCCT...AGTGTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp ATATTTTGTCTCAAGTTCTCAGGGCTTTCAGTTCACAGTCACCTGGCCACATGCGCCAGCGATGACACATaGGATCCTCACAAGGTACAG +
Preference number: 5 (lower is better)
Translates to: IFCLKFSGLSVHSHLATCASDDT*DPHKVQ
Trigger: CTGTACCTTGTGAGGATCCAATGTGTCATCGCTGGC...GCATGTGGCCAGGTGACTGTGAACTGAAAGCCCTGAGAACTTGAGACAAAATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CAA 90 bp TACAGTGTCAGACTCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGCTTCCCCACAAGTTCTaGAGTTCAGTGAGGGCCTCA +
Preference number: 5 (lower is better)
Translates to: YSVRLAIYSKCLDWTFLWLPHKF*SSVRAS
Trigger: TGAGGCCCTCACTGAACTCAAGAACTTGTGGGGAAG...CCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGACACTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS TCA 90 bp CTAAAATCCTGGATATTTCTTCCGCTGAGGTCGACTTCCTTAAGGTaGGGGAGTCTACATTTGCTCCATGGTCCCACCTTTAGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: LKSWIFLPLRSTSLR*GSLHLLHGPTFRLK
Trigger: CTTCAGCCTAAAGGTGGGACCATGGAGCAAATGTAGACTCCCTCACCTTAAGGAAGTCGACCTCAGCGGAAGAAATATCCAGGATTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS TCA 90 bp GGGGATGACACATGCTTCCTGAATGTAACCAGAGCTGTTGCAGAATaGGGGGTCAACCGGTCTTCCATTTATATTGGAGCATGCTATTGC +
Preference number: 5 (lower is better)
Translates to: GDDTCFLNVTRAVAE*GVNRSSIYIGACYC
Trigger: GCAATAGCATGCTCCAATATAAATGGAAGACCGGTTGACCCCTCATTCTGCAACAGCTCTGGTTACATTCAGGAAGCATGTGTCATCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS TCA 90 bp GGGGCAGCTATCTTGATTCTCAAAAGACTGGATTATGAATGTCCTTaGCCTAGATTGGCGGCCTGTGGTCTCGAAGCTTCTTCCGTCAAT +
Preference number: 5 (lower is better)
Translates to: GAAILILKRLDYECP*PRLAACGLEASSVN
Trigger: ATTGACGGAAGAAGCTTCGAGACCACAGGCCGCCAATCTAGGTCAAGGACATTCATAATCCAGTCTTTTGAGAATCAAGATAGCTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CCA 90 bp AATCACGAACACAAAGGCTTAACAGGGCGTTTCTTCCATCACTTCTaGTACACCACACCTGCCTGGTTTGAAACCCTATCACTACATCCC +
Preference number: 5 (lower is better)
Translates to: NHEHKGLTGRFFHHF*YTTPAWFETLSLHP
Trigger: GGGATGTAGTGATAGGGTTTCAAACCAGGCAGGTGTGGTGTACCAGAAGTGATGGAAGAAACGCCCTGTTAAGCCTTTGTGTTCGTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS CCA 90 bp TCCTCTTCCACAGCGTGGGGATCTCAGCTCATTATTGATCTTGCATaGAGACCAGTGTTCTACGACCCAGGAATATTGATCACACTCACT +
Preference number: 5 (lower is better)
Translates to: SSSTAWGSQLIIDLA*RPVFYDPGILITLT
Trigger: AGTGAGTGTGATCAATATTCCTGGGTCGTAGAACACTGGTCTCCATGCAAGATCAATAATGAGCTGAGATCCCCACGCTGTGGAAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CCA 90 bp ACTCACACACCTGATTCTTCTAGACTGTGTTCCTCTTCCACAGCGTaGGGATCTCAGCTCATTATTGATCTTGCATGGAGACCAGTGTTC +
Preference number: 5 (lower is better)
Translates to: THTPDSSRLCSSSTA*GSQLIIDLAWRPVF
Trigger: GAACACTGGTCTCCATGCAAGATCAATAATGAGCTGAGATCCCCACGCTGTGGAAGAGGAACACAGTCTAGAAGAATCAGGTGTGTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp TACAGTGTCAGACTCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGCCTTTCCTTTGGAGGTaGGCTGCTCTCATCACAGTT +
Preference number: 5 (lower is better)
Translates to: YSVRLAIYSKCLDWTFLWPFLWR*AALITV
Trigger: AACTGTGATGAGAGCAGCCAACCTCCAAAGGAAAGG...CCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGACACTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp GTCAGACTCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGATTGTCATACCTGGGACATGGTaGCAGAAATTCCCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: VRLAIYSKCLDWTFLWIVIPGTW*QKFPFS
Trigger: GCTGAAGGGGAATTTCTGCAACCATGTCCCAGGTAT...GACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp TCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGATTGTCAATATGCTCCTTGATGCAATGGTaGCTGGTAGGCTCTGGGCAC +
Preference number: 5 (lower is better)
Translates to: SPFTVNASIGLSCGLSICSLMQW*LVGSGH
Trigger: GTGCCCAGAGCCTACCAGCAACCATTGCATCAAGGA...GCATATTGACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp CTGTGGATTGTCAATATGCGGCTGAGGATCAAGTTTACTCAAGTCTGTGCGAAAGCCAGCGATGACACATaGGATCCTCACAAGGTACAG +
Preference number: 5 (lower is better)
Translates to: LWIVNMRLRIKFTQVCAKASDDT*DPHKVQ
Trigger: CTGTACCTTGTGAGGATCCAATGTGTCATCGCTGGC...TTTCGCACAGACTTGAGTAAACTTGATCCTCAGCCGCATATTGACAATCCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp TCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGATTGTCAATATGCTCCATGCTGACAGACTaGCCATCACTGCGCACACAG +
Preference number: 5 (lower is better)
Translates to: SPFTVNASIGLSCGLSICSMLTD*PSLRTQ
Trigger: CTGTGTGCGCAGTGATGGCAAGTCTGTCAGCATGGA...GCATATTGACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS GCA 90 bp TTAGCCATTTTGATCGAATTCTCACTCCAATCCCACAAGATGAGCTaGAAGAACCCCAGCTGGACCAGTCACTTAGCTTGCAATCAAACG +
Preference number: 5 (lower is better)
Translates to: LAILIEFSLQSHKMS*KNPSWTSHLACNQT
Trigger: CGTTTGATTGCAAGCTAAGTGACTGGTCCAGCTGGGGTTCTTGCAGCTCATCTTGTGGGATTGGAGTGAGAATTCGATCAAAATGGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp AGTTCACAGTCACCTGGCCACATGCATGTGGGAAACCATCAACACAGTGAAAGACAGAAGAAGAGAGACTaGGCATTCCTTCCATTCAGA +
Preference number: 5 (lower is better)
Translates to: SSQSPGHMHVGNHQHSERQKKRD*AFLPFR
Trigger: TCTGAATGGAAGGAATGCCAAGTCTCTCTTCTTCTG...TCTTTCACTGTGTTGATGGTTTCCCACATGCATGTGGCCAGGTGACTGTGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CAA 90 bp CTTGACAGAAATAGCTTGCAGAAGGGAATATTTTGTCTCAAGTTCTCAGGGCTTTCCTTGATGCAATGGTaGCTGGTAGGCTCTGGGCAC +
Preference number: 5 (lower is better)
Translates to: LDRNSLQKGIFCLKFSGLSLMQW*LVGSGH
Trigger: GTGCCCAGAGCCTACCAGCAACCATTGCATCAAGGA...AAGCCCTGAGAACTTGAGACAAAATATTCCCTTCTGCAAGCTATTTCTGTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CAA 90 bp TACAGTGTCAGACTCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGCAGCCAATGGTCACATaGAGAGCAGTCACAAGAGTA +
Preference number: 5 (lower is better)
Translates to: YSVRLAIYSKCLDWTFLWQPMVT*RAVTRV
Trigger: TACTCTTGTGACTGCTCTCAATGTGACCATTGGCTG...CCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGACACTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS TCA 90 bp ATATCTTCACACTCTCTTTCTTCAAACAAGGTGTCTGGGCACTCTTaGCCCCCATTGGCTGCTTCCTGGATGATAATCCTGTATCGAGAT +
Preference number: 5 (lower is better)
Translates to: ISSHSLSSNKVSGHS*PPLAASWMIILYRD
Trigger: ATCTCGATACAGGATTATCATCCAGGAAGCAGCCAATGGGGGTCAAGAGTGCCCAGACACCTTGTTTGAAGAAAGAGAGTGTGAAGATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 90 bp GCATGGGAGGAAACAAGGTCTTACAGTTTCTGGCCGTGTAGACTCTaGACATCTTTTGGTCATTACTTGTCCCACATGACTCTTGATACA +
Preference number: 5 (lower is better)
Translates to: AWEETRSYSFWPCRL*TSFGHYLSHMTLDT
Trigger: TGTATCAAGAGTCATGTGGGACAAGTAATGACCAAAAGATGTCCAGAGTCTACACGGCCAGAAACTGTAAGACCTTGTTTCCTCCCATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp TTTGCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTCAGTTCTGTCCACACCTGCCTGGTTaGAAACCCTATCACTACATC +
Preference number: 5 (lower is better)
Translates to: FAHCKREAEGVRYISQFCPHLPG*KPYHYI
Trigger: GATGTAGTGATAGGGTTTCAAACCAGGCAGGTGTGG...ACAGAACTGAGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CAA 90 bp TTTGCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTCAGTTCTGTATACCTGGGACATGGTaGCAGAAATTCCCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: FAHCKREAEGVRYISQFCIPGTW*QKFPFS
Trigger: GCTGAAGGGGAATTTCTGCAACCATGTCCCAGGTAT...ACAGAACTGAGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CAA 90 bp TCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACACTTGCATGAGACAGCTCTaGTCTGCAGCCCCTTCCCAC +
Preference number: 5 (lower is better)
Translates to: SNSLPHSPVHSPNFLANTCMRQL*SAAPSH
Trigger: GTGGGAAGGGGCTGCAGACAAGAGCTGTCTCATGCA...AGTGTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp GCATTTGCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTCAGTTCGTTGCTTCACAGTTCTaGGAGCAGGGAGTGAACTTA +
Preference number: 5 (lower is better)
Translates to: AFAHCKREAEGVRYISQFVASQF*EQGVNL
Trigger: TAAGTTCACTCCCTGCTCCAAGAACTGTGAAGCAAC...GAACTGAGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGCAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS TCA 90 bp CCTGTACATGGTCGTGTTTCTAGAACCTGTTGGGGGCAGCTATCTTaGTTCTCAAAAGACTGGATTATGAATGTCCTTGACCTAGATTGG +
Preference number: 5 (lower is better)
Translates to: PVHGRVSRTCWGQLS*FSKDWIMNVLDLDW
Trigger: CCAATCTAGGTCAAGGACATTCATAATCCAGTCTTTTGAGAATCAAGATAGCTGCCCCCAACAGGTTCTAGAAACACGACCATGTACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp TCTCAGTTCTGTGACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAATATTTCACATGGGCCCCAGGTaGACCAGGAAGATACTATGC +
Preference number: 5 (lower is better)
Translates to: SQFCDQILDRNSLQKGIFHMGPR*TRKILC
Trigger: GCATAGTATCTTCCTGGTCAACCTGGGGCCCATGTG...AAATATTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGTCACAGAACTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CAA 90 bp AATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTCACATGGGCCCCAGGTaGACCAGGAAGATACTATGC +
Preference number: 5 (lower is better)
Translates to: NFLANTLHISSGNYPIYSHMGPR*TRKILC
Trigger: GCATAGTATCTTCCTGGTCAACCTGGGGCCCATGTG...AGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp ACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAATATTTTGTCTCAAGTTCTTGCATGAGACAGCTCTaGTCTGCAGCCCCTTCCCAC +
Preference number: 5 (lower is better)
Translates to: TKYLTEIACRREYFVSSSCMRQL*SAAPSH
Trigger: GTGGGAAGGGGCTGCAGACAAGAGCTGTCTCATGCA...AGAACTTGAGACAAAATATTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CAA 90 bp TCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACACTGGAGCATCATCCTGGTaGCACAGGCTCCTGTTCACT +
Preference number: 5 (lower is better)
Translates to: SNSLPHSPVHSPNFLANTGASSW*HRLLFT
Trigger: AGTGAACAGGAGCCTGTGCAACCAGGATGATGCTCC...AGTGTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp AATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTTGGAAACAGTTTTCATaGAGGAGGCAGGGCCGCACC +
Preference number: 5 (lower is better)
Translates to: NFLANTLHISSGNYPIYSWKQFS*RRQGRT
Trigger: GGTGCGGCCCTGCCTCCTCAATGAAAACTGTTTCCA...AGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp TATTTAAAGGTAAAAACTCAGAGAACTTCTGAAATGGCAACCCATTCTCTCTGTGCATGCTGGAATGCATaGCCGAATAGCAGCAGGGCG +
Preference number: 5 (lower is better)
Translates to: YLKVKTQRTSEMATHSLCACWNA*PNSSRA
Trigger: CGCCCTGCTGCTATTCGGCAATGCATTCCAGCATGC...ACAGAGAGAATGGGTTGCCATTTCAGAAGTTCTCTGAGTTTTTACCTTTAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp TCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGATTGTCAATATGCATCTGGGTCCAGAGGTaGGAGAGACCATCCTTTAAA +
Preference number: 5 (lower is better)
Translates to: SPFTVNASIGLSCGLSICIWVQR*ERPSFK
Trigger: TTTAAAGGATGGTCTCTCCAACCTCTGGACCCAGAT...GCATATTGACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS GCA 90 bp TCTTTCTTCAAACAAGGTGTCTGGGCACTCTTGACCCCCATTGGCTaGTTCCTGGATGATAATCCTGTATCGAGATTGTTTTATTGTAGT +
Preference number: 5 (lower is better)
Translates to: SFFKQGVWALLTPIG*FLDDNPVSRLFYCS
Trigger: ACTACAATAAAACAATCTCGATACAGGATTATCATCCAGGAAGCAGCCAATGGGGGTCAAGAGTGCCCAGACACCTTGTTTGAAGAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp GAAATAGCTTGCAGAAGGGAATATTTTGTCTCAAGTTCTCAGGGCTTTCAGTTCCAGCCAATGGTCACATaGAGAGCAGTCACAAGAGTA +
Preference number: 5 (lower is better)
Translates to: EIACRREYFVSSSQGFQFQPMVT*RAVTRV
Trigger: TACTCTTGTGACTGCTCTCAATGTGACCATTGGCTG...GAACTGAAAGCCCTGAGAACTTGAGACAAAATATTCCCTTCTGCAAGCTATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CAA 90 bp ACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAATATTTTGTCTCAAGTTCTTGCCCACCCCACATGTaGCTTCTCCATTCCAGCCAA +
Preference number: 5 (lower is better)
Translates to: TKYLTEIACRREYFVSSSCPPHM*LLHSSQ
Trigger: TTGGCTGGAATGGAGAAGCAACATGTGGGGTGGGCA...AGAACTTGAGACAAAATATTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CAA 90 bp TTATCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACTGCCCACCCCACATGTaGCTTCTCCATTCCAGCCAA +
Preference number: 5 (lower is better)
Translates to: LSNSLPHSPVHSPNFLANCPPHM*LLHSSQ
Trigger: TTGGCTGGAATGGAGAAGCAACATGTGGGGTGGGCA...GTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp GTCAGACTCGCCATTTACAGTAAATGCCTCGATTGGACTTTCCTGTGGATTGTCTCTTTTGGTCATTACTaGTCCCACATGACTCTTGAT +
Preference number: 5 (lower is better)
Translates to: VRLAIYSKCLDWTFLWIVSFGHY*SHMTLD
Trigger: ATCAAGAGTCATGTGGGACAAGTAATGACCAAAAGA...GACAATCCACAGGAAAGTCCAATCGAGGCATTTACTGTAAATGGCGAGTCTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp ATATTAGCATTTGCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTCCTTCTCCACATTCTTaGTCATCTCCTTGCACCCAC +
Preference number: 5 (lower is better)
Translates to: ILAFAHCKREAEGVRYISPSPHS*SSPCTH
Trigger: GTGGGTGCAAGGAGATGACAAAGAATGTGGAGAAGG...AGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGCAAATGCTAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CAA 90 bp ATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTACAGCCGTGTGGGATATaGAGCCATTGTGGACTACAC +
Preference number: 5 (lower is better)
Translates to: ISLLTLCTFHLETTQFTLQPCGI*SHCGLH
Trigger: GTGTAGTCCACAATGGCTCAATATCCCACACGGCTG...TAGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp GATCAAGTTTACTCAAGTCTGTGCGAAATCCTTCAGGTTCTCTTCCTCTCATTTCAGAAGAAGAGAGACTaGGCATTCCTTCCATTCAGA +
Preference number: 5 (lower is better)
Translates to: DQVYSSLCEILQVLFLSFQKKRD*AFLPFR
Trigger: TCTGAATGGAAGGAATGCCAAGTCTCTCTTCTTCTG...AAATGAGAGGAAGAGAACCTGAAGGATTTCGCACAGACTTGAGTAAACTTGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp TCTGTGACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAATATTTTGTCTCACCAAAGTGGATCGTGTaGCTCCAGAAGAAGAGAGAC +
Preference number: 5 (lower is better)
Translates to: SVTKYLTEIACRREYFVSPKWIV*LQKKRD
Trigger: GTCTCTCTTCTTCTGGAGCAACACGATCCACTTTGG...TGAGACAAAATATTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGTCACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CAA 90 bp ATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTACCAAAGTGGATCGTGTaGCTCCAGAAGAAGAGAGAC +
Preference number: 5 (lower is better)
Translates to: ISLLTLCTFHLETTQFTLPKWIV*LQKKRD
Trigger: GTCTCTCTTCTTCTGGAGCAACACGATCCACTTTGG...TAGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp GCATTTGCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTCAGTTCTCTTTTGGTCATTACTaGTCCCACATGACTCTTGAT +
Preference number: 5 (lower is better)
Translates to: AFAHCKREAEGVRYISQFSFGHY*SHMTLD
Trigger: ATCAAGAGTCATGTGGGACAAGTAATGACCAAAAGA...GAACTGAGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGCAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CAA 90 bp TGGCAACCCATTCTCTCTGTGTTCATGAAAATAGGCAATCCAATTTGCAAGTTTGTTGCTTCACAGTTCTaGGAGCAGGGAGTGAACTTA +
Preference number: 5 (lower is better)
Translates to: WQPILSVFMKIGNPICKFVASQF*EQGVNL
Trigger: TAAGTTCACTCCCTGCTCCAAGAACTGTGAAGCAAC...AAACTTGCAAATTGGATTGCCTATTTTCATGAACACAGAGAGAATGGGTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp TCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACACTCCTTCTCCACATTCTTaGTCATCTCCTTGCACCCAC +
Preference number: 5 (lower is better)
Translates to: SNSLPHSPVHSPNFLANTPSPHS*SSPCTH
Trigger: GTGGGTGCAAGGAGATGACAAAGAATGTGGAGAAGG...AGTGTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp TTTGCACACTGCAAAAGAGAAGCAGAAGGGGTCAGGTATATATCTCAGTTCTGTGGTCTTCCATTTATATaGGAGCATGCTATTGCTCGA +
Preference number: 5 (lower is better)
Translates to: FAHCKREAEGVRYISQFCGLPFI*EHAIAR
Trigger: TCGAGCAATAGCATGCTCCAATATAAATGGAAGACC...ACAGAACTGAGATATATACCTGACCCCTTCTGCTTCTCTTTTGCAGTGTGCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CAA 90 bp TCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACACTGAGTTCTTCTCTGCATaGCATGGGGGTCACATGACT +
Preference number: 5 (lower is better)
Translates to: SNSLPHSPVHSPNFLANTEFFSA*HGGHMT
Trigger: AGTCATGTGACCCCCATGCAATGCAGAGAAGAACTC...AGTGTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp AATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTAACACTCTGTCCATGTaGTCCATCCTGAGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: NFLANTLHISSGNYPIYSNTLSM*SILRAD
Trigger: GTCAGCTCTCAGGATGGACAACATGGACAGAGTGTT...AGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp TATATATCTCAGTTCTGTGACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAAAGTCTCACAGTCTTTaGGCATCACACAAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: YISQFCDQILDRNSLQKGKSHSL*ASHKAG
Trigger: TCCAGCCTTGTGTGATGCCAAAAGACTGTGAGACTT...TCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGTCACAGAACTGAGATATATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CAA 90 bp ATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTAAAGTCTCACAGTCTTTaGGCATCACACAAGGCTGGA +
Preference number: 5 (lower is better)
Translates to: ISLLTLCTFHLETTQFTLKSHSL*ASHKAG
Trigger: TCCAGCCTTGTGTGATGCCAAAAGACTGTGAGACTT...TAGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp TCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACACTCTCCACTCTGTCAGATaGTACTGGAACTGGAAACAG +
Preference number: 5 (lower is better)
Translates to: SNSLPHSPVHSPNFLANTLHSVR*YWNWKQ
Trigger: CTGTTTCCAGTTCCAGTACAATCTGACAGAGTGGAG...AGTGTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp ATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTATGGGATATTGAGCCATaGTGGACTACACAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: ISLLTLCTFHLETTQFTLWDIEP*WTTQEK
Trigger: CTTCTCCTGTGTAGTCCACAATGGCTCAATATCCCA...TAGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp AATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTCTTCAGGATTCCTTCTaGGAAGGGTACTTCTCCACA +
Preference number: 5 (lower is better)
Translates to: NFLANTLHISSGNYPIYSLQDSF*EGYFST
Trigger: TGTGGAGAAGTACCCTTCCAAGAAGGAATCCTGAAG...AGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp AGAAGTCTGAGAGCTACAAAAGAGAAAGCATTTAAGGCAGCAGTTGATGTCTACAATCCAGGAAGCCACTaGATCTCATTATCTCTGTGT +
Preference number: 5 (lower is better)
Translates to: RSLRATKEKAFKAAVDVYNPGSH*ISLSLC
Trigger: ACACAGAGATAATGAGATCAAGTGGCTTCCTGGATT...GTAGACATCAACTGCTGCCTTAAATGCTTTCTCTTTTGTAGCTCTCAGACTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp TTATCAAATAGTCTACCTCATTCTCCAGTACATTCACCTAATTTCCTTGCTAACTTCTTTGTCATCTCCTaGCACCCACAATCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: LSNSLPHSPVHSPNFLANFFVIS*HPQSSL
Trigger: CAAGGAGGATTGTGGGTGCAAGGAGATGACAAAGAA...GTTAGCAAGGAAATTAGGTGAATGTACTGGAGAATGAGGTAGACTATTTGATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp TGGCAACCCATTCTCTCTGTGTTCATGAAAATAGGCAATCCAATTTGCAAGTTTGGTCTTCCATTTATATaGGAGCATGCTATTGCTCGA +
Preference number: 5 (lower is better)
Translates to: WQPILSVFMKIGNPICKFGLPFI*EHAIAR
Trigger: TCGAGCAATAGCATGCTCCAATATAAATGGAAGACC...AAACTTGCAAATTGGATTGCCTATTTTCATGAACACAGAGAGAATGGGTTGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp AAGGTAAAAACTCAGAGAACTTCTGAAATGGCAACCCATTCTCTCTGTGTTCATAGCTCATTATTGATCTaGCATGGAGACCAGTGTTCT +
Preference number: 5 (lower is better)
Translates to: KVKTQRTSEMATHSLCVHSSLLI*HGDQCS
Trigger: AGAACACTGGTCTCCATGCAAGATCAATAATGAGCT...ATGAACACAGAGAGAATGGGTTGCCATTTCAGAAGTTCTCTGAGTTTTTACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp CATTCTCTCTGTGTTCATGAAAATAGGCAATCCAATTTGCAAGTTTTCGAACCAGATCTCAGCTCATTATaGATCTTGCATGGAGACCAG +
Preference number: 5 (lower is better)
Translates to: HSLCVHENRQSNLQVFEPDLSSL*ILHGDQ
Trigger: CTGGTCTCCATGCAAGATCAATAATGAGCTGAGATC...TGGTTCGAAAACTTGCAAATTGGATTGCCTATTTTCATGAACACAGAGAGAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp AATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTTTGGGGGCAGCTATCTaGATTCTCAAAAGACTGGAT +
Preference number: 5 (lower is better)
Translates to: NFLANTLHISSGNYPIYSLGAAI*ILKRLD
Trigger: ATCCAGTCTTTTGAGAATCAAGATAGCTGCCCCCAA...AGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp CACTATTACTTTTGTCATATTCGTATTCTGCCCAAGGTATCACATCATGAGATTATGGCGAGGTGTGCTTaGATGTGGTTTTGGCTTCTT +
Preference number: 5 (lower is better)
Translates to: HYYFCHIRILPKVSHHEIMARCA*MWFWLL
Trigger: AAGAAGCCAAAACCACATCAAAGCACACCTCGCCAT...AATCTCATGATGTGATACCTTGGGCAGAATACGAATATGACAAAAGTAATAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp ACCAAATACTTGACAGAAATAGCTTGCAGAAGGGAATATTTTGTCTCAAGTTCTGACTCTGGACATCTTTaGGTCATTACTTGTCCCACA +
Preference number: 5 (lower is better)
Translates to: TKYLTEIACRREYFVSSSDSGHL*VITCPT
Trigger: TGTGGGACAAGTAATGACCAAAAGATGTCCAGAGTC...AGAACTTGAGACAAAATATTCCCTTCTGCAAGCTATTTCTGTCAAGTATTTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000040311.14
CDS-3UTR CAA 90 bp CACTATTACTTTTGTCATATTCGTATTCTGCCCAAGGTATCACATCATGAGATTGACTCTGGACATCTTTaGGTCATTACTTGTCCCACA +
Preference number: 5 (lower is better)
Translates to: HYYFCHIRILPKVSHHEIDSGHL*VITCPT
Trigger: TGTGGGACAAGTAATGACCAAAAGATGTCCAGAGTC...AATCTCATGATGTGATACCTTGGGCAGAATACGAATATGACAAAAGTAATAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp AATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTACAGTCCGCTCATTATaGTTCCAAAGACTTGCTTTC +
Preference number: 5 (lower is better)
Translates to: NFLANTLHISSGNYPIYSTVRSL*FQRLAF
Trigger: GAAAGCAAGTCTTTGGAACAATAATGAGCGGACTGT...AGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp CACTATTACTTTTGTCATATTCGTATTCTGCCCAAGGTATCACATCATGAGATTTACGACCCAGGAATATaGATCACACTCACTGTAACA +
Preference number: 5 (lower is better)
Translates to: HYYFCHIRILPKVSHHEIYDPGI*ITLTVT
Trigger: TGTTACAGTGAGTGTGATCAATATTCCTGGGTCGTA...AATCTCATGATGTGATACCTTGGGCAGAATACGAATATGACAAAAGTAATAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp TATTTAAAGGTAAAAACTCAGAGAACTTCTGAAATGGCAACCCATTCTCTCTGTTTGTCGACCTTCTCCTaGGGTTGGCATAATGATAAA +
Preference number: 5 (lower is better)
Translates to: YLKVKTQRTSEMATHSLCLSTFS*GWHNDK
Trigger: TTTATCATTATGCCAACCCAAGGAGAAGGTCGACAA...ACAGAGAGAATGGGTTGCCATTTCAGAAGTTCTCTGAGTTTTTACCTTTAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS-3UTR CAA 90 bp ATTTCCTTGCTAACACTCTGCACATTTCATCTGGAAACTACCCAATTTACTCTATGCTTTGATGTGGTTTaGGCTTCTTGCAAACAAGAT +
Preference number: 5 (lower is better)
Translates to: ISLLTLCTFHLETTQFTLCFDVV*ASCKQD
Trigger: ATCTTGTTTGCAAGAAGCCAAAACCACATCAAAGCA...TAGAGTAAATTGGGTAGTTTCCAGATGAAATGTGCAGAGTGTTAGCAAGGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CAA 90 bp GTGCTGTGCAGTCACACATTCCACAGCCCGAGGCCTGGGCTCACCTaGGGCCCCAGGAACCAGAAGGCAGCGATGCCAGTCGGAAACCTC +
Preference number: 6 (lower is better)
Translates to: VLCSHTFHSPRPGLT*GPRNQKAAMPVGNL
Trigger: GAGGTTTCCGACTGGCATCGCTGCCTTCTGGTTCCTGGGGCCCAAGGTGAGCCCAGGCCTCGGGCTGTGGAATGTGTGACTGCACAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS GCA 72 bp AGCACGACTTTGGGCTCCGCCTGGTCCGCAGTCACCTaGACACCTTCCCCAGGGACCGGTTTTCCAGAGGAA +
Preference number: 6 (lower is better)
Translates to: STTLGSAWSAVT*TPSPGTGFPEE
Trigger: TTCCTCTGGAAAACCGGTCCCTGGGGAAGGTGTGCAGGTGACTGCGGACCAGGCGGAGCCCAAAGTCGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS GCA 72 bp GCCTCGCAGGCTCTGGACTCCGTGAGATTTGGACACTaGAGACCTCCATACAGAGGGGGCGCGATGGCCACA +
Preference number: 6 (lower is better)
Translates to: ASQALDSVRFGH*RPPYRGGAMAT
Trigger: TGTGGCCATCGCGCCCCCTCTGTATGGAGGTCTGCAGTGTCCAAATCTCACGGAGTCCAGAGCCTGCGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS CAA 90 bp GGGACTCGTCCACCCTTCTATGTGAAAGCACCATACAGCACGACTTaGGGCTCCGCCTGGTCCGCAGTCACCTGCACACCTTCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: GTRPPFYVKAPYSTT*GSAWSAVTCTPSPG
Trigger: CCCTGGGGAAGGTGTGCAGGTGACTGCGGACCAGGCGGAGCCCAAAGTCGTGCTGTATGGTGCTTTCACATAGAAGGGTGGACGAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CAA 72 bp CGGGCCTGGAGACTTCCTTGGTCCTTGATGCAATGGTaGCTGGTAGGCTCTGGGCACAGTACACCTCCCGGG +
Preference number: 6 (lower is better)
Translates to: RAWRLPWSLMQW*LVGSGHSTPPG
Trigger: CCCGGGAGGTGTACTGTGCCCAGAGCCTACCAGCAACCATTGCATCAAGGACCAAGGAAGTCTCCAGGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 72 bp CAGTTTCTTCCCACATCCTTCGGGGCAGGTGGACCATaGGGAGAACTCAGATACCACGCAGTCCCTGGGGCA +
Preference number: 6 (lower is better)
Translates to: QFLPTSFGAGGP*GELRYHAVPGA
Trigger: TGCCCCAGGGACTGCGTGGTATCTGAGTTCTCCCCATGGTCCACCTGCCCCGAAGGATGTGGGAAGAAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS CCA 72 bp AACTGGAGCCTCGCAGGCTCTGGACTCCGTGAGATTTaGACACTGCAGACCTCCATACAGAGGGGGCGCGAT +
Preference number: 6 (lower is better)
Translates to: NWSLAGSGLREI*TLQTSIQRGRD
Trigger: ATCGCGCCCCCTCTGTATGGAGGTCTGCAGTGTCCAAATCTCACGGAGTCCAGAGCCTGCGAGGCTCCAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS CCA 72 bp CCACGGGCCTGGAGACTTCCTTGGTCCTTGATGCAATaGTTGCTGGTAGGCTCTGGGCACAGTACACCTCCC +
Preference number: 6 (lower is better)
Translates to: PRAWRLPWSLMQ*LLVGSGHSTPP
Trigger: GGGAGGTGTACTGTGCCCAGAGCCTACCAGCAACCATTGCATCAAGGACCAAGGAAGTCTCCAGGCCCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CAA 72 bp AGATTACGCTGCTCGCAGTGGTCCATGCTGACAGACTaGCCATCACTGCGCACACAGCTCAGCAGGCGGGTC +
Preference number: 6 (lower is better)
Translates to: RLRCSQWSMLTD*PSLRTQLSRRV
Trigger: GACCCGCCTGCTGAGCTGTGTGCGCAGTGATGGCAAGTCTGTCAGCATGGACCACTGCGAGCAGCGTAATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CAA 90 bp TCCTTTCCACGGGCCTGGAGACTTCCTTGGTCCTTGATGCAATGGTaGCTGGTAGGCTCTGGGCACAGTACACCTCCCGGGTCTGGATCC +
Preference number: 6 (lower is better)
Translates to: SFPRAWRLPWSLMQW*LVGSGHSTPPGSGS
Trigger: GGATCCAGACCCGGGAGGTGTACTGTGCCCAGAGCCTACCAGCAACCATTGCATCAAGGACCAAGGAAGTCTCCAGGCCCGTGGAAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CAA 90 bp GGTTTTTCCAGATTACGCTGCTCGCAGTGGTCCATGCTGACAGACTaGCCATCACTGCGCACACAGCTCAGCAGGCGGGTCCTCACACCC +
Preference number: 6 (lower is better)
Translates to: GFSRLRCSQWSMLTD*PSLRTQLSRRVLTP
Trigger: GGGTGTGAGGACCCGCCTGCTGAGCTGTGTGCGCAGTGATGGCAAGTCTGTCAGCATGGACCACTGCGAGCAGCGTAATCTGGAAAAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CAA 90 bp CTTCTCCACACAGGGCCTCCTCCACAGGGACAGCCGTGTGGGATATaGAGCCATTGTGGACTACACAGGAGAAGCTGCGCACCTGGACTC +
Preference number: 6 (lower is better)
Translates to: LLHTGPPPQGQPCGI*SHCGLHRRSCAPGL
Trigger: GAGTCCAGGTGCGCAGCTTCTCCTGTGTAGTCCACAATGGCTCAATATCCCACACGGCTGTCCCTGTGGAGGAGGCCCTGTGTGGAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS TCA 72 bp GCTGGAATGCATTGCCGAATAGCAGCAGGGCGTGCCTaGGGGGAGCAGCCACCTGTGACATTAAGGCCATCT +
Preference number: 6 (lower is better)
Translates to: AGMHCRIAAGRA*GEQPPVTLRPS
Trigger: AGATGGCCTTAATGTCACAGGTGGCTGCTCCCCTCAGGCACGCCCTGCTGCTATTCGGCAATGCATTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CCA 72 bp ACCAGAAGGCAGCGATGCCAGTCGGAAACCTCCCACTaGAACAGGTCACTGTGCCAGTCACACACGCGGAAA +
Preference number: 6 (lower is better)
Translates to: TRRQRCQSETSH*NRSLCQSHTRK
Trigger: TTTCCGCGTGTGTGACTGGCACAGTGACCTGTTCCAGTGGGAGGTTTCCGACTGGCATCGCTGCCTTCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS CCA 72 bp CCAGTTGCCAAGGACCCAACTATAGCAGGGTGTCACTaGGCAGGGTTTCTGCTGGGTGAGTTCTGTGGGGCA +
Preference number: 6 (lower is better)
Translates to: PVAKDPTIAGCH*AGFLLGEFCGA
Trigger: TGCCCCACAGAACTCACCCAGCAGAAACCCTGCCCAGTGACACCCTGCTATAGTTGGGTCCTTGGCAACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CAA 72 bp GAACAGGCCTGGGTTTCTTGGGGAGCATCATCCTGGTaGCACAGGCTCCTGTTCACTGCCCCTCCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: EQAWVSWGASSW*HRLLFTAPPSL
Trigger: CAGAGAAGGAGGGGCAGTGAACAGGAGCCTGTGCAACCAGGATGATGCTCCCCAAGAAACCCAGGCCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CAA 90 bp CCAAGCATAGTGTCCTTTCCACGGGCCTGGAGACTTCCTTGGTCCTaGATGCAATGGTTGCTGGTAGGCTCTGGGCACAGTACACCTCCC +
Preference number: 6 (lower is better)
Translates to: PSIVSFPRAWRLPWS*MQWLLVGSGHSTPP
Trigger: GGGAGGTGTACTGTGCCCAGAGCCTACCAGCAACCATTGCATCAAGGACCAAGGAAGTCTCCAGGCCCGTGGAAAGGACACTATGCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CAA 90 bp GCAGGTCCCAAGCATAGTGTCCTTTCCACGGGCCTGGAGACTTCCTaGGTCCTTGATGCAATGGTTGCTGGTAGGCTCTGGGCACAGTAC +
Preference number: 6 (lower is better)
Translates to: AGPKHSVLSTGLETS*VLDAMVAGRLWAQY
Trigger: GTACTGTGCCCAGAGCCTACCAGCAACCATTGCATCAAGGACCAAGGAAGTCTCCAGGCCCGTGGAAAGGACACTATGCTTGGGACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS TCA 72 bp CACATTGGATCCTCACAAGGTACAGATTCTGCCAGATaGGGGCAGCGCCCCATGGGCCCTGTAGACTCCATG +
Preference number: 6 (lower is better)
Translates to: HIGSSQGTDSAR*GQRPMGPVDSM
Trigger: CATGGAGTCTACAGGGCCCATGGGGCGCTGCCCTCATCTGGCAGAATCTGTACCTTGTGAGGATCCAATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS GCA 72 bp GCGATGACACATTGGATCCTCACAAGGTACAGATTCTaGCAGATGAGGGCAGCGCCCCATGGGCCCTGTAGA +
Preference number: 6 (lower is better)
Translates to: AMTHWILTRYRF*QMRAAPHGPCR
Trigger: TCTACAGGGCCCATGGGGCGCTGCCCTCATCTGGCAGAATCTGTACCTTGTGAGGATCCAATGTGTCATCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS GCA 72 bp AAGGTGCAGTCGTCCCGACAGGGAATGGTGCATTCCTaGACAAGGGGAGGCATGCCATTCATCTGCTTGAGG +
Preference number: 6 (lower is better)
Translates to: KVQSSRQGMVHS*TRGGMPFICLR
Trigger: CCTCAAGCAGATGAATGGCATGCCTCCCCTTGTGCAGGAATGCACCATTCCCTGTCGGGACGACTGCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 72 bp AGAGAACAGGCCTGGGTTTCTTGGGGAGCATCATCCTaGTTGCACAGGCTCCTGTTCACTGCCCCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: REQAWVSWGASS*LHRLLFTAPPS
Trigger: AGAAGGAGGGGCAGTGAACAGGAGCCTGTGCAACCAGGATGATGCTCCCCAAGAAACCCAGGCCTGTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CCA 72 bp TCCACAGGGACAGCCGTGTGGGATATTGAGCCATTGTaGACTACACAGGAGAAGCTGCGCACCTGGACTCCT +
Preference number: 6 (lower is better)
Translates to: STGTAVWDIEPL*TTQEKLRTWTP
Trigger: AGGAGTCCAGGTGCGCAGCTTCTCCTGTGTAGTCCACAATGGCTCAATATCCCACACGGCTGTCCCTGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CAA 72 bp GTGTCCTTTCCACGGGCCTGGAGACTTCCTTGGTCCTaGATGCAATGGTTGCTGGTAGGCTCTGGGCACAGT +
Preference number: 6 (lower is better)
Translates to: VSFPRAWRLPWS*MQWLLVGSGHS
Trigger: ACTGTGCCCAGAGCCTACCAGCAACCATTGCATCAAGGACCAAGGAAGTCTCCAGGCCCGTGGAAAGGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CAA 72 bp TCCTCCACAGGGACAGCCGTGTGGGATATTGAGCCATaGTGGACTACACAGGAGAAGCTGCGCACCTGGACT +
Preference number: 6 (lower is better)
Translates to: SSTGTAVWDIEP*WTTQEKLRTWT
Trigger: AGTCCAGGTGCGCAGCTTCTCCTGTGTAGTCCACAATGGCTCAATATCCCACACGGCTGTCCCTGTGGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CAA 90 bp ACTGTGCCAGTCACACACGCGGAAACAGCTCCTTTCCTTTGGAGGTaGGCTGCTCTCATCACAGTTCGACATGGGACTCGTCCACCCTTC +
Preference number: 6 (lower is better)
Translates to: TVPVTHAETAPFLWR*AALITVRHGTRPPF
Trigger: GAAGGGTGGACGAGTCCCATGTCGAACTGTGATGAGAGCAGCCAACCTCCAAAGGAAAGGAGCTGTTTCCGCGTGTGTGACTGGCACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CAA 90 bp ACAGGTCACTGTGCCAGTCACACACGCGGAAACAGCTCCTTTCCTTaGGAGGTTGGCTGCTCTCATCACAGTTCGACATGGGACTCGTCC +
Preference number: 6 (lower is better)
Translates to: TGHCASHTRGNSSFP*EVGCSHHSSTWDSS
Trigger: GGACGAGTCCCATGTCGAACTGTGATGAGAGCAGCCAACCTCCAAAGGAAAGGAGCTGTTTCCGCGTGTGTGACTGGCACAGTGACCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CAA 90 bp CAGGGCGTTTCTTCCATCACTTCTGGTACACCACACCTGCCTGGTTaGAAACCCTATCACTACATCCCCAGGCTGGGAGTGGTGGTGTGC +
Preference number: 6 (lower is better)
Translates to: QGVSSITSGTPHLPG*KPYHYIPRLGVVVC
Trigger: GCACACCACCACTCCCAGCCTGGGGATGTAGTGATAGGGTTTCAAACCAGGCAGGTGTGGTGTACCAGAAGTGATGGAAGAAACGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS CAA 90 bp TTGAGTTCAGTGAGGGCCTCAGCAGATGCCGAGTTCTTCTCTGCATaGCATGGGGGTCACATGACTGTGGGCATCTGCTCCATGTTCCCC +
Preference number: 6 (lower is better)
Translates to: LSSVRASADAEFFSA*HGGHMTVGICSMFP
Trigger: GGGGAACATGGAGCAGATGCCCACAGTCATGTGACCCCCATGCAATGCAGAGAAGAACTCGGCATCTGCTGAGGCCCTCACTGAACTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS TCA 72 bp ACTATGCAGTCCATCGAGCAAGGGACATTGCAAAGCTaGGAGGCTGAGGGGGCAGGTCCCAAGCATAGTGTC +
Preference number: 6 (lower is better)
Translates to: TMQSIEQGTLQS*EAEGAGPKHSV
Trigger: GACACTATGCTTGGGACCTGCCCCCTCAGCCTCTCAGCTTTGCAATGTCCCTTGCTCGATGGACTGCATAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS TCA 72 bp TCGTTCAGGAGGAGGAGGCACTGGACAGAGACCCCCTaGTACTTCTTCTCCTCGCTCATTCTGACAGACAGC +
Preference number: 6 (lower is better)
Translates to: SFRRRRHWTETP*YFFSSLILTDS
Trigger: GCTGTCTGTCAGAATGAGCGAGGAGAAGAAGTATCAGGGGGTCTCTGTCCAGTGCCTCCTCCTCCTGAACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS TCA 72 bp CTGAGGGGAGCAGCCACCTGTGACATTAAGGCCATCTaGGCGCTGGCACCACACAGTCCGCTCATTATTGTT +
Preference number: 6 (lower is better)
Translates to: LRGAATCDIKAI*ALAPHSPLIIV
Trigger: AACAATAATGAGCGGACTGTGTGGTGCCAGCGCTCAGATGGCCTTAATGTCACAGGTGGCTGCTCCCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS GCA 72 bp ACACGCGGAAACAGCTCCTTTCCTTTGGAGGTTGGCTaGTCTCATCACAGTTCGACATGGGACTCGTCCACC +
Preference number: 6 (lower is better)
Translates to: TRGNSSFPLEVG*SHHSSTWDSST
Trigger: GGTGGACGAGTCCCATGTCGAACTGTGATGAGAGCAGCCAACCTCCAAAGGAAAGGAGCTGTTTCCGCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS GCA 72 bp TGCCAGTCGGAAACCTCCCACTGGAACAGGTCACTGTaGCAGTCACACACGCGGAAACAGCTCCTTTCCTTT +
Preference number: 6 (lower is better)
Translates to: CQSETSHWNRSL*QSHTRKQLLSF
Trigger: AAAGGAAAGGAGCTGTTTCCGCGTGTGTGACTGGCACAGTGACCTGTTCCAGTGGGAGGTTTCCGACTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS GCA 72 bp GGGATATTGAGCCATTGTGGACTACACAGGAGAAGCTaGGCACCTGGACTCCTTCTCCACAATCTCCGCCCT +
Preference number: 6 (lower is better)
Translates to: GILSHCGLHRRS*APGLLLHNLRP
Trigger: AGGGCGGAGATTGTGGAGAAGGAGTCCAGGTGCGCAGCTTCTCCTGTGTAGTCCACAATGGCTCAATATCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CAA 90 bp GATCAGCAATACAGATCCCTTCCGAGGCAAGCCAGCGATGACACATaGGATCCTCACAAGGTACAGATTCTGCCAGATGAGGGCAGCGCC +
Preference number: 6 (lower is better)
Translates to: DQQYRSLPRQASDDT*DPHKVQILPDEGSA
Trigger: GGCGCTGCCCTCATCTGGCAGAATCTGTACCTTGTGAGGATCCAATGTGTCATCGCTGGCTTGCCTCGGAAGGGATCTGTATTGCTGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CAA 90 bp GGGTTTCTGCTGGGTGAGTTCTGTGGGGCATTGTCGACCTTCTCCTaGGGTTGGCATAATGATAAATCGAGTCCGGCTCATGCGACCTCC +
Preference number: 6 (lower is better)
Translates to: GFLLGEFCGALSTFS*GWHNDKSSPAHATS
Trigger: GGAGGTCGCATGAGCCGGACTCGATTTATCATTATGCCAACCCAAGGAGAAGGTCGACAATGCCCCACAGAACTCACCCAGCAGAAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CAA 90 bp GGGTGTCACTGGGCAGGGTTTCTGCTGGGTGAGTTCTGTGGGGCATaGTCGACCTTCTCCTTGGGTTGGCATAATGATAAATCGAGTCCG +
Preference number: 6 (lower is better)
Translates to: GCHWAGFLLGEFCGA*STFSLGWHNDKSSP
Trigger: CGGACTCGATTTATCATTATGCCAACCCAAGGAGAAGGTCGACAATGCCCCACAGAACTCACCCAGCAGAAACCCTGCCCAGTGACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CAA 90 bp CCTGTGGTCTCGAAGCTTCTTCCGTCAATGCAGGTTAGCTCACACTaGCTCCACTCAGACCATGGGGTAATGTGGCAGTCTCCTGGGCAA +
Preference number: 6 (lower is better)
Translates to: PVVSKLLPSMQVSSH*LHSDHGVMWQSPGQ
Trigger: TTGCCCAGGAGACTGCCACATTACCCCATGGTCTGAGTGGAGCAAGTGTGAGCTAACCTGCATTGACGGAAGAAGCTTCGAGACCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS TCA 72 bp CTTCCATCACTTCTGGTACACCACACCTGCCTGGTTTaGAACCCTATCACTACATCCCCAGGCTGGGAGTGG +
Preference number: 6 (lower is better)
Translates to: LPSLLVHHTCLV*NPITTSPGWEW
Trigger: CCACTCCCAGCCTGGGGATGTAGTGATAGGGTTTCAAACCAGGCAGGTGTGGTGTACCAGAAGTGATGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS TCA 72 bp CTGTCAGATTGTACTGGAACTGGAAACAGTTTTCATTaGGGAGGCAGGGCCGCACCTGCGAGTCTTCCCCAC +
Preference number: 6 (lower is better)
Translates to: LSDCTGTGNSFH*GGRAAPASLPH
Trigger: GTGGGGAAGACTCGCAGGTGCGGCCCTGCCTCCTCAATGAAAACTGTTTCCAGTTCCAGTACAATCTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS TCA 72 bp GTTTTTCCAGATTACGCTGCTCGCAGTGGTCCATGCTaGCAGACTTGCCATCACTGCGCACACAGCTCAGCA +
Preference number: 6 (lower is better)
Translates to: VFPDYAARSGPC*QTCHHCAHSSA
Trigger: TGCTGAGCTGTGTGCGCAGTGATGGCAAGTCTGTCAGCATGGACCACTGCGAGCAGCGTAATCTGGAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS GCA 72 bp CACAATCTCCGCCCTCCAATTTACATGCAGACCAGTTaGCAAGGACCCAACTATAGCAGGGTGTCACTGGGC +
Preference number: 6 (lower is better)
Translates to: HNLRPPIYMQTS*QGPNYSRVSLG
Trigger: GCCCAGTGACACCCTGCTATAGTTGGGTCCTTGGCAACTGGTCTGCATGTAAATTGGAGGGCGGAGATTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS GCA 72 bp ATTGGCGGCCTGTGGTCTCGAAGCTTCTTCCGTCAATaGAGGTTAGCTCACACTTGCTCCACTCAGACCATG +
Preference number: 6 (lower is better)
Translates to: IGGLWSRSFFRQ*RLAHTCSTQTM
Trigger: CATGGTCTGAGTGGAGCAAGTGTGAGCTAACCTGCATTGACGGAAGAAGCTTCGAGACCACAGGCCGCCAAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CCA 72 bp TCACACACGCGGAAACAGCTCCTTTCCTTTGGAGGTTaGCTGCTCTCATCACAGTTCGACATGGGACTCGTC +
Preference number: 6 (lower is better)
Translates to: SHTRKQLLSFGG*LLSSQFDMGLV
Trigger: GACGAGTCCCATGTCGAACTGTGATGAGAGCAGCCAACCTCCAAAGGAAAGGAGCTGTTTCCGCGTGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 72 bp TATTGTAGTATTTCCTGGCTGGCAGGGCCGTGGGCATaGTGTCCACTCACTGAAAGCAGTCACAAGGCAGTC +
Preference number: 6 (lower is better)
Translates to: YCSISWLAGPWA*CPLTESSHKAV
Trigger: GACTGCCTTGTGACTGCTTTCAGTGAGTGGACACCATGCCCACGGCCCTGCCAGCCAGGAAATACTACAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 72 bp CTCACTGGTGCCTGTTCTCCCCTGCCTGATAGACTCTaGAACCAGGATACAAGAGCTCCATTTCTGCGGCTT +
Preference number: 6 (lower is better)
Translates to: LTGACSPLPDRL*NQDTRAPFLRL
Trigger: AAGCCGCAGAAATGGAGCTCTTGTATCCTGGTTCCAGAGTCTATCAGGCAGGGGAGAACAGGCACCAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 72 bp ATGACACACTCACTGGGACACAGAAGAGAACAGGCCTaGGTTTCTTGGGGAGCATCATCCTGGTTGCACAGG +
Preference number: 6 (lower is better)
Translates to: MTHSLGHRREQA*VSWGASSWLHR
Trigger: CCTGTGCAACCAGGATGATGCTCCCCAAGAAACCCAGGCCTGTTCTCTTCTGTGTCCCAGTGAGTGTGTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CCA 72 bp ATCCTCTGGGGTTTTTCCAGATTACGCTGCTCGCAGTaGTCCATGCTGACAGACTTGCCATCACTGCGCACA +
Preference number: 6 (lower is better)
Translates to: ILWGFSRLRCSQ*SMLTDLPSLRT
Trigger: TGTGCGCAGTGATGGCAAGTCTGTCAGCATGGACCACTGCGAGCAGCGTAATCTGGAAAAACCCCAGAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CAA 72 bp GTCACACACGCGGAAACAGCTCCTTTCCTTTGGAGGTaGGCTGCTCTCATCACAGTTCGACATGGGACTCGT +
Preference number: 6 (lower is better)
Translates to: VTHAETAPFLWR*AALITVRHGTR
Trigger: ACGAGTCCCATGTCGAACTGTGATGAGAGCAGCCAACCTCCAAAGGAAAGGAGCTGTTTCCGCGTGTGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CAA 72 bp TGTGCCAGTCACACACGCGGAAACAGCTCCTTTCCTTaGGAGGTTGGCTGCTCTCATCACAGTTCGACATGG +
Preference number: 6 (lower is better)
Translates to: CASHTRGNSSFP*EVGCSHHSSTW
Trigger: CCATGTCGAACTGTGATGAGAGCAGCCAACCTCCAAAGGAAAGGAGCTGTTTCCGCGTGTGTGACTGGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS TCA 72 bp CAGATCTCATTGGACACCATGGTTCTATTGAGCTTCTaGAGACAGCGCACTGTCCGGTGCTGTAGACCGTGC +
Preference number: 6 (lower is better)
Translates to: QISLDTMVLLSF*RQRTVRCCRPC
Trigger: GCACGGTCTACAGCACCGGACAGTGCGCTGTCTTCAGAAGCTCAATAGAACCATGGTGTCCAATGAGATCTG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS TCA 72 bp TTCCTGCTTTTCCCTGTTAGCTGCCGCCTCCTGATCTaGGTTGCTTCACAGTTCTTGGAGCAGGGAGTGAAC +
Preference number: 6 (lower is better)
Translates to: FLLFPVSCRLLI*VASQFLEQGVN
Trigger: GTTCACTCCCTGCTCCAAGAACTGTGAAGCAACTCAGATCAGGAGGCGGCAGCTAACAGGGAAAAGCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS GCA 72 bp AGTTCTGGGCATTCCTGGCCACCTCCAATAGCAATATaGTTCACGTTCCGGCTCCTGCTTCTAACTCCAGGT +
Preference number: 6 (lower is better)
Translates to: SSGHSWPPPIAI*FTFRLLLLTPG
Trigger: ACCTGGAGTTAGAAGCAGGAGCCGGAACGTGAAGCATATTGCTATTGGAGGTGGCCAGGAATGCCCAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS GCA 72 bp GTCTGGATCCCACCACCACAGATTGGTCCTGTCTCATaGCAAAGTGGATCGTGTTGCTCCAGAAGAAGAGAG +
Preference number: 6 (lower is better)
Translates to: VWIPPPQIGPVS*QSGSCCSRRRE
Trigger: CTCTCTTCTTCTGGAGCAACACGATCCACTTTGGCATGAGACAGGACCAATCTGTGGTGGTGGGATCCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS GCA 72 bp TGGTTATCATCAGAGATGCATGAGACAGCTCTTGTCTaGAGCCCCTTCCCACATGCCTCACTGGTGCCTGTT +
Preference number: 6 (lower is better)
Translates to: WLSSEMHETALV*SPFPHASLVPV
Trigger: AACAGGCACCAGTGAGGCATGTGGGAAGGGGCTGCAGACAAGAGCTGTCTCATGCATCTCTGATGATAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS GCA 72 bp TGGAAACAGTTTTCATTGAGGAGGCAGGGCCGCACCTaGGAGTCTTCCCCACAAGTTCTTGAGTTCAGTGAG +
Preference number: 6 (lower is better)
Translates to: WKQFSLRRQGRT*ESSPQVLEFSE
Trigger: CTCACTGAACTCAAGAACTTGTGGGGAAGACTCGCAGGTGCGGCCCTGCCTCCTCAATGAAAACTGTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS GCA 72 bp GACTCCTTCTCCACAATCTCCGCCCTCCAATTTACATaGAGACCAGTTGCCAAGGACCCAACTATAGCAGGG +
Preference number: 6 (lower is better)
Translates to: DSFSTISALQFT*RPVAKDPTIAG
Trigger: CCCTGCTATAGTTGGGTCCTTGGCAACTGGTCTGCATGTAAATTGGAGGGCGGAGATTGTGGAGAAGGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CCA 72 bp CGTTTCTTCCATCACTTCTGGTACACCACACCTGCCTaGTTTGAAACCCTATCACTACATCCCCAGGCTGGG +
Preference number: 6 (lower is better)
Translates to: RFFHHFWYTTPA*FETLSLHPQAG
Trigger: CCCAGCCTGGGGATGTAGTGATAGGGTTTCAAACCAGGCAGGTGTGGTGTACCAGAAGTGATGGAAGAAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS CCA 72 bp AGTCCCAGAACGGCAGGTCTTGGAACAGGGGCTCCATaGAGACCATTCAGAAGTCTCACAGTCTTTTGGCAT +
Preference number: 6 (lower is better)
Translates to: SPRTAGLGTGAP*RPFRSLTVFWH
Trigger: ATGCCAAAAGACTGTGAGACTTCTGAATGGTCTCCATGGAGCCCCTGTTCCAAGACCTGCCGTTCTGGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS CCA 72 bp CCCACCACCACAGATTGGTCCTGTCTCATGCCAAAGTaGATCGTGTTGCTCCAGAAGAAGAGAGACTTGGCA +
Preference number: 6 (lower is better)
Translates to: PTTTDWSCLMPK*IVLLQKKRDLA
Trigger: TGCCAAGTCTCTCTTCTTCTGGAGCAACACGATCCACTTTGGCATGAGACAGGACCAATCTGTGGTGGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS CCA 72 bp ACAGATCCCTTCCGAGGCAAGCCAGCGATGACACATTaGATCCTCACAAGGTACAGATTCTGCCAGATGAGG +
Preference number: 6 (lower is better)
Translates to: TDPFRGKPAMTH*ILTRYRFCQMR
Trigger: CCTCATCTGGCAGAATCTGTACCTTGTGAGGATCCAATGTGTCATCGCTGGCTTGCCTCGGAAGGGATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 72 bp CTCCAATCCCACAAGATGAGCTGCAAGAACCCCAGCTaGACCAGTCACTTAGCTTGCAATCAAACGGACAGG +
Preference number: 6 (lower is better)
Translates to: LQSHKMSCKNPS*TSHLACNQTDR
Trigger: CCTGTCCGTTTGATTGCAAGCTAAGTGACTGGTCCAGCTGGGGTTCTTGCAGCTCATCTTGTGGGATTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 72 bp GAGTTCTGTGGGGCATTGTCGACCTTCTCCTTGGGTTaGCATAATGATAAATCGAGTCCGGCTCATGCGACC +
Preference number: 6 (lower is better)
Translates to: EFCGALSTFSLG*HNDKSSPAHAT
Trigger: GGTCGCATGAGCCGGACTCGATTTATCATTATGCCAACCCAAGGAGAAGGTCGACAATGCCCCACAGAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CCA 72 bp GAGCAGCCACCTGTGACATTAAGGCCATCTGAGCGCTaGCACCACACAGTCCGCTCATTATTGTTCCAAAGA +
Preference number: 6 (lower is better)
Translates to: EQPPVTLRPSER*HHTVRSLLFQR
Trigger: TCTTTGGAACAATAATGAGCGGACTGTGTGGTGCCAGCGCTCAGATGGCCTTAATGTCACAGGTGGCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CAA 72 bp TCTTCCATCACTTCTGGTACACCACACCTGCCTGGTTaGAAACCCTATCACTACATCCCCAGGCTGGGAGTG +
Preference number: 6 (lower is better)
Translates to: SSITSGTPHLPG*KPYHYIPRLGV
Trigger: CACTCCCAGCCTGGGGATGTAGTGATAGGGTTTCAAACCAGGCAGGTGTGGTGTACCAGAAGTGATGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS CAA 90 bp TCATTTCTGCAGACTGGTTATCATCAGAGATGCATGAGACAGCTCTaGTCTGCAGCCCCTTCCCACATGCCTCACTGGTGCCTGTTCTCC +
Preference number: 6 (lower is better)
Translates to: SFLQTGYHQRCMRQL*SAAPSHMPHWCLFS
Trigger: GGAGAACAGGCACCAGTGAGGCATGTGGGAAGGGGCTGCAGACAAGAGCTGTCTCATGCATCTCTGATGATAACCAGTCTGCAGAAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CAA 90 bp CCCACCACCACAGATTGGTCCTGTCTCATGCCAAAGTGGATCGTGTaGCTCCAGAAGAAGAGAGACTTGGCATTCCTTCCATTCAGAGGT +
Preference number: 6 (lower is better)
Translates to: PTTTDWSCLMPKWIV*LQKKRDLAFLPFRG
Trigger: ACCTCTGAATGGAAGGAATGCCAAGTCTCTCTTCTTCTGGAGCAACACGATCCACTTTGGCATGAGACAGGACCAATCTGTGGTGGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS GCA 72 bp AAACACATGGGCCCCAGGTTGACCAGGAAGATACTATaGAGTCCATCGAGCAAGGGACATTGCAAAGCTGAG +
Preference number: 6 (lower is better)
Translates to: KHMGPRLTRKIL*SPSSKGHCKAE
Trigger: CTCAGCTTTGCAATGTCCCTTGCTCGATGGACTGCATAGTATCTTCCTGGTCAACCTGGGGCCCATGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS GCA 72 bp CTTCTCCTCGCTCATTCTGACAGACAGCCTTCAGAATaGGATGTCCCAGGCCACATTTCCCATGATCAGCAA +
Preference number: 6 (lower is better)
Translates to: LLLAHSDRQPSE*DVPGHISHDQQ
Trigger: TTGCTGATCATGGGAAATGTGGCCTGGGACATCGCATTCTGAAGGCTGTCTGTCAGAATGAGCGAGGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS GCA 72 bp GTGCATTCCTGCACAAGGGGAGGCATGCCATTCATCTaGTTGAGGCACTCTGTCATTTCTGCAGACTGGTTA +
Preference number: 6 (lower is better)
Translates to: VHSCTRGGMPFI*LRHSVISADWL
Trigger: TAACCAGTCTGCAGAAATGACAGAGTGCCTCAAGCAGATGAATGGCATGCCTCCCCTTGTGCAGGAATGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS GCA 72 bp GGAATACTCATCCTCTGGGGTTTTTCCAGATTACGCTaGTCGCAGTGGTCCATGCTGACAGACTTGCCATCA +
Preference number: 6 (lower is better)
Translates to: GILILWGFSRLR*SQWSMLTDLPS
Trigger: TGATGGCAAGTCTGTCAGCATGGACCACTGCGAGCAGCGTAATCTGGAAAAACCCCAGAGGATGAGTATTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CCA 72 bp CTCAGCTGGCATGTGCTCCACTCTGTCAGATTGTACTaGAACTGGAAACAGTTTTCATTGAGGAGGCAGGGC +
Preference number: 6 (lower is better)
Translates to: LSWHVLHSVRLY*NWKQFSLRRQG
Trigger: GCCCTGCCTCCTCAATGAAAACTGTTTCCAGTTCCAGTACAATCTGACAGAGTGGAGCACATGCCAGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CCA 72 bp CTCACACCCTGGCCACAGGAAACATTTTCACTCAGCTaGCATGTGCTCCACTCTGTCAGATTGTACTGGAAC +
Preference number: 6 (lower is better)
Translates to: LTPWPQETFSLS*HVLHSVRLYWN
Trigger: GTTCCAGTACAATCTGACAGAGTGGAGCACATGCCAGCTGAGTGAAAATGTTTCCTGTGGCCAGGGTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CCA 72 bp TGGGTGAGTTCTGTGGGGCATTGTCGACCTTCTCCTTaGGTTGGCATAATGATAAATCGAGTCCGGCTCATG +
Preference number: 6 (lower is better)
Translates to: WVSSVGHCRPSP*VGIMINRVRLM
Trigger: CATGAGCCGGACTCGATTTATCATTATGCCAACCCAAGGAGAAGGTCGACAATGCCCCACAGAACTCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CAA 72 bp TACAGATCCCTTCCGAGGCAAGCCAGCGATGACACATaGGATCCTCACAAGGTACAGATTCTGCCAGATGAG +
Preference number: 6 (lower is better)
Translates to: YRSLPRQASDDT*DPHKVQILPDE
Trigger: CTCATCTGGCAGAATCTGTACCTTGTGAGGATCCAATGTGTCATCGCTGGCTTGCCTCGGAAGGGATCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CAA 72 bp CTGGGTGAGTTCTGTGGGGCATTGTCGACCTTCTCCTaGGGTTGGCATAATGATAAATCGAGTCCGGCTCAT +
Preference number: 6 (lower is better)
Translates to: LGEFCGALSTFS*GWHNDKSSPAH
Trigger: ATGAGCCGGACTCGATTTATCATTATGCCAACCCAAGGAGAAGGTCGACAATGCCCCACAGAACTCACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CAA 72 bp TCGAAGCTTCTTCCGTCAATGCAGGTTAGCTCACACTaGCTCCACTCAGACCATGGGGTAATGTGGCAGTCT +
Preference number: 6 (lower is better)
Translates to: SKLLPSMQVSSH*LHSDHGVMWQS
Trigger: AGACTGCCACATTACCCCATGGTCTGAGTGGAGCAAGTGTGAGCTAACCTGCATTGACGGAAGAAGCTTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CAA 90 bp TTGACCCCCATTGGCTGCTTCCTGGATGATAATCCTGTATCGAGATaGTTTTATTGTAGTATTTCCTGGCTGGCAGGGCCGTGGGCATGG +
Preference number: 6 (lower is better)
Translates to: LTPIGCFLDDNPVSR*FYCSISWLAGPWAW
Trigger: CCATGCCCACGGCCCTGCCAGCCAGGAAATACTACAATAAAACAATCTCGATACAGGATTATCATCCAGGAAGCAGCCAATGGGGGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CAA 90 bp GGAATGGTGCATTCCTGCACAAGGGGAGGCATGCCATTCATCTGCTaGAGGCACTCTGTCATTTCTGCAGACTGGTTATCATCAGAGATG +
Preference number: 6 (lower is better)
Translates to: GMVHSCTRGGMPFIC*RHSVISADWLSSEM
Trigger: CATCTCTGATGATAACCAGTCTGCAGAAATGACAGAGTGCCTCAAGCAGATGAATGGCATGCCTCCCCTTGTGCAGGAATGCACCATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CAA 90 bp TATCCTCCGAGCCAGGCACCTTCATGCAGTAATCCAGGAAGCCACTaGATCTCATTATCTCTGTGTATCCCTTCTCACAGCCACAGACTC +
Preference number: 6 (lower is better)
Translates to: YPPSQAPSCSNPGSH*ISLSLCIPSHSHRL
Trigger: GAGTCTGTGGCTGTGAGAAGGGATACACAGAGATAATGAGATCAAGTGGCTTCCTGGATTACTGCATGAAGGTGCCTGGCTCGGAGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS TCA 72 bp ATCATGGCAGTTCTCAAAAACACATGGGCCCCAGGTTaGCCAGGAAGATACTATGCAGTCCATCGAGCAAGG +
Preference number: 6 (lower is better)
Translates to: IMAVLKNTWAPG*PGRYYAVHRAR
Trigger: CCTTGCTCGATGGACTGCATAGTATCTTCCTGGTCAACCTGGGGCCCATGTGTTTTTGAGAACTGCCATGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS TCA 72 bp ACATGGCGCTGTCTCATTCTAAAGCCTTTCTTCCCCTaGGGATCATGGCAGTTCTCAAAAACACATGGGCCC +
Preference number: 6 (lower is better)
Translates to: TWRCLILKPFFP*GSWQFSKTHGP
Trigger: GGGCCCATGTGTTTTTGAGAACTGCCATGATCCTCAGGGGAAGAAAGGCTTTAGAATGAGACAGCGCCATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS TCA 72 bp CACTCTCTTTCTTCAAACAAGGTGTCTGGGCACTCTTaGCCCCCATTGGCTGCTTCCTGGATGATAATCCTG +
Preference number: 6 (lower is better)
Translates to: HSLSSNKVSGHS*PPLAASWMIIL
Trigger: CAGGATTATCATCCAGGAAGCAGCCAATGGGGGTCAAGAGTGCCCAGACACCTTGTTTGAAGAAAGAGAGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS TCA 72 bp TGTCATTTCTGCAGACTGGTTATCATCAGAGATGCATaGGACAGCTCTTGTCTGCAGCCCCTTCCCACATGC +
Preference number: 6 (lower is better)
Translates to: CHFCRLVIIRDA*DSSCLQPLPTC
Trigger: GCATGTGGGAAGGGGCTGCAGACAAGAGCTGTCTCATGCATCTCTGATGATAACCAGTCTGCAGAAATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS TCA 72 bp GCCAGGCACCTTCATGCAGTAATCCAGGAAGCCACTTaGTCTCATTATCTCTGTGTATCCCTTCTCACAGCC +
Preference number: 6 (lower is better)
Translates to: ARHLHAVIQEAT*SHYLCVSLLTA
Trigger: GGCTGTGAGAAGGGATACACAGAGATAATGAGATCAAGTGGCTTCCTGGATTACTGCATGAAGGTGCCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS GCA 72 bp TTGATCGAATTCTCACTCCAATCCCACAAGATGAGCTaGAAGAACCCCAGCTGGACCAGTCACTTAGCTTGC +
Preference number: 6 (lower is better)
Translates to: LIEFSLQSHKMS*KNPSWTSHLAC
Trigger: GCAAGCTAAGTGACTGGTCCAGCTGGGGTTCTTGCAGCTCATCTTGTGGGATTGGAGTGAGAATTCGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS GCA 72 bp CGTAGGCCAAGGTCAGTGGCTTCTGATGGCGAGGTGTaGTTTGATGTGGTTTTGGCTTCTTGCAAACAAGAT +
Preference number: 6 (lower is better)
Translates to: RRPRSVASDGEV*FDVVLASCKQD
Trigger: ATCTTGTTTGCAAGAAGCCAAAACCACATCAAAGCACACCTCGCCATCAGAAGCCACTGACCTTGGCCTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CCA 72 bp TGCAGAATGAGGGGTCAACCGGTCTTCCATTTATATTaGAGCATGCTATTGCTCGAAAGCGCACGCCTTCTC +
Preference number: 6 (lower is better)
Translates to: CRMRGQPVFHLY*SMLLLESARLL
Trigger: GAGAAGGCGTGCGCTTTCGAGCAATAGCATGCTCCAATATAAATGGAAGACCGGTTGACCCCTCATTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 72 bp TTACATGTCCAAGTCTCCATCGTAGGCCAAGGTCAGTaGCTTCTGATGGCGAGGTGTGCTTTGATGTGGTTT +
Preference number: 6 (lower is better)
Translates to: LHVQVSIVGQGQ*LLMARCALMWF
Trigger: AAACCACATCAAAGCACACCTCGCCATCAGAAGCCACTGACCTTGGCCTACGATGGAGACTTGGACATGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CAA 72 bp GATCATGGCAGTTCTCAAAAACACATGGGCCCCAGGTaGACCAGGAAGATACTATGCAGTCCATCGAGCAAG +
Preference number: 6 (lower is better)
Translates to: DHGSSQKHMGPR*TRKILCSPSSK
Trigger: CTTGCTCGATGGACTGCATAGTATCTTCCTGGTCAACCTGGGGCCCATGTGTTTTTGAGAACTGCCATGATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CAA 72 bp CATTCCTGCACAAGGGGAGGCATGCCATTCATCTGCTaGAGGCACTCTGTCATTTCTGCAGACTGGTTATCA +
Preference number: 6 (lower is better)
Translates to: HSCTRGGMPFIC*RHSVISADWLS
Trigger: TGATAACCAGTCTGCAGAAATGACAGAGTGCCTCAAGCAGATGAATGGCATGCCTCCCCTTGTGCAGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CAA 90 bp TGTCTCATGCCAAAGTGGATCGTGTTGCTCCAGAAGAAGAGAGACTaGGCATTCCTTCCATTCAGAGGTTCTCCAGGAATACCTGGGACA +
Preference number: 6 (lower is better)
Translates to: CLMPKWIVLLQKKRD*AFLPFRGSPGIPGT
Trigger: TGTCCCAGGTATTCCTGGAGAACCTCTGAATGGAAGGAATGCCAAGTCTCTCTTCTTCTGGAGCAACACGATCCACTTTGGCATGAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS TCA 72 bp AGTGTTCACAGATCTCATTGGACACCATGGTTCTATTaGGCTTCTGAAGACAGCGCACTGTCCGGTGCTGTA +
Preference number: 6 (lower is better)
Translates to: SVHRSHWTPWFY*ASEDSALSGAV
Trigger: TACAGCACCGGACAGTGCGCTGTCTTCAGAAGCTCAATAGAACCATGGTGTCCAATGAGATCTGTGAACACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS TCA 72 bp TGGATATTTCTTCCGCTGAGGTCGACTTCCTTAAGGTaGGGGAGTCTACATTTGCTCCATGGTCCCACCTTT +
Preference number: 6 (lower is better)
Translates to: WIFLPLRSTSLR*GSLHLLHGPTF
Trigger: AAAGGTGGGACCATGGAGCAAATGTAGACTCCCTCACCTTAAGGAAGTCGACCTCAGCGGAAGAAATATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS TCA 72 bp ACCAGTCACTTAGCTTGCAATCAAACGGACAGGGGATaGCACATGCTTCCTGAATGTAACCAGAGCTGTTGC +
Preference number: 6 (lower is better)
Translates to: TSHLACNQTDRG*HMLPECNQSCC
Trigger: GCAACAGCTCTGGTTACATTCAGGAAGCATGTGTCATCCCCTGTCCGTTTGATTGCAAGCTAAGTGACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS TCA 72 bp TGTGAACACTCTGTCCATGTTGTCCATCCTGAGAGCTaGCAGTTGACCACACATTCCACCAGACAGGGAATA +
Preference number: 6 (lower is better)
Translates to: CEHSVHVVHPES*QLTTHSTRQGI
Trigger: TATTCCCTGTCTGGTGGAATGTGTGGTCAACTGTCAGCTCTCAGGATGGACAACATGGACAGAGTGTTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS GCA 72 bp ACCTGGGACATGGTTGCAGAAATTCCCCTTCAGCAATaGAGGTCTCTTTCTCAAGAAGTTCTGGGCATTCCT +
Preference number: 6 (lower is better)
Translates to: TWDMVAEIPLQQ*RSLSQEVLGIP
Trigger: AGGAATGCCCAGAACTTCTTGAGAAAGAGACCTGCATTGCTGAAGGGGAATTTCTGCAACCATGTCCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS GCA 72 bp ATAGACTCTGGAACCAGGATACAAGAGCTCCATTTCTaGGGCTTCCACCGGTATGAAGGACACAGTGAGATA +
Preference number: 6 (lower is better)
Translates to: IDSGTRIQELHF*GFHRYEGHSEI
Trigger: TATCTCACTGTGTCCTTCATACCGGTGGAAGCCGCAGAAATGGAGCTCTTGTATCCTGGTTCCAGAGTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 72 bp CACAAAGGCTTAACAGGGCGTTTCTTCCATCACTTCTaGTACACCACACCTGCCTGGTTTGAAACCCTATCA +
Preference number: 6 (lower is better)
Translates to: HKGLTGRFFHHF*YTTPAWFETLS
Trigger: TGATAGGGTTTCAAACCAGGCAGGTGTGGTGTACCAGAAGTGATGGAAGAAACGCCCTGTTAAGCCTTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS CCA 72 bp AATCCTGTATCGAGATTGTTTTATTGTAGTATTTCCTaGCTGGCAGGGCCGTGGGCATGGTGTCCACTCACT +
Preference number: 6 (lower is better)
Translates to: NPVSRLFYCSIS*LAGPWAWCPLT
Trigger: AGTGAGTGGACACCATGCCCACGGCCCTGCCAGCCAGGAAATACTACAATAAAACAATCTCGATACAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CAA 72 bp ACACTCTCTTTCTTCAAACAAGGTGTCTGGGCACTCTaGACCCCCATTGGCTGCTTCCTGGATGATAATCCT +
Preference number: 6 (lower is better)
Translates to: TLSFFKQGVWAL*TPIGCFLDDNP
Trigger: AGGATTATCATCCAGGAAGCAGCCAATGGGGGTCAAGAGTGCCCAGACACCTTGTTTGAAGAAAGAGAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CAA 72 bp TTGCAGAATGAGGGGTCAACCGGTCTTCCATTTATATaGGAGCATGCTATTGCTCGAAAGCGCACGCCTTCT +
Preference number: 6 (lower is better)
Translates to: LQNEGSTGLPFI*EHAIARKRTPS
Trigger: AGAAGGCGTGCGCTTTCGAGCAATAGCATGCTCCAATATAAATGGAAGACCGGTTGACCCCTCATTCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CAA 72 bp CTTCCACAGCGTGGGGATCTCAGCTCATTATTGATCTaGCATGGAGACCAGTGTTCTACGACCCAGGAATAT +
Preference number: 6 (lower is better)
Translates to: LPQRGDLSSLLI*HGDQCSTTQEY
Trigger: ATATTCCTGGGTCGTAGAACACTGGTCTCCATGCAAGATCAATAATGAGCTGAGATCCCCACGCTGTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CAA 72 bp AGCCAGGCACCTTCATGCAGTAATCCAGGAAGCCACTaGATCTCATTATCTCTGTGTATCCCTTCTCACAGC +
Preference number: 6 (lower is better)
Translates to: SQAPSCSNPGSH*ISLSLCIPSHS
Trigger: GCTGTGAGAAGGGATACACAGAGATAATGAGATCAAGTGGCTTCCTGGATTACTGCATGAAGGTGCCTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CAA 90 bp GATATCTTCACACTCTCTTTCTTCAAACAAGGTGTCTGGGCACTCTaGACCCCCATTGGCTGCTTCCTGGATGATAATCCTGTATCGAGA +
Preference number: 6 (lower is better)
Translates to: DIFTLSFFKQGVWAL*TPIGCFLDDNPVSR
Trigger: TCTCGATACAGGATTATCATCCAGGAAGCAGCCAATGGGGGTCAAGAGTGCCCAGACACCTTGTTTGAAGAAAGAGAGTGTGAAGATATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CAA 90 bp AGAATGAGGGGTCAACCGGTCTTCCATTTATATTGGAGCATGCTATaGCTCGAAAGCGCACGCCTTCTCCACATTCTTTGTCATCTCCTT +
Preference number: 6 (lower is better)
Translates to: RMRGQPVFHLYWSML*LESARLLHILCHLL
Trigger: AAGGAGATGACAAAGAATGTGGAGAAGGCGTGCGCTTTCGAGCAATAGCATGCTCCAATATAAATGGAAGACCGGTTGACCCCTCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CAA 90 bp CTGAGCGCTGGCACCACACAGTCCGCTCATTATTGTTCCAAAGACTaGCTTTCCATATGTAGTGATAACATTTGCCACCTGTACATGGTC +
Preference number: 6 (lower is better)
Translates to: LSAGTTQSAHYCSKD*LSICSDNICHLYMV
Trigger: GACCATGTACAGGTGGCAAATGTTATCACTACATATGGAAAGCAAGTCTTTGGAACAATAATGAGCGGACTGTGTGGTGCCAGCGCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS GCA 72 bp AAACAAGGTGTCTGGGCACTCTTGACCCCCATTGGCTaGTTCCTGGATGATAATCCTGTATCGAGATTGTTT +
Preference number: 6 (lower is better)
Translates to: KQGVWALLTPIG*FLDDNPVSRLF
Trigger: AAACAATCTCGATACAGGATTATCATCCAGGAAGCAGCCAATGGGGGTCAAGAGTGCCCAGACACCTTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS GCA 72 bp GTCAACCGGTCTTCCATTTATATTGGAGCATGCTATTaGTCGAAAGCGCACGCCTTCTCCACATTCTTTGTC +
Preference number: 6 (lower is better)
Translates to: VNRSSIYIGACY*SKAHAFSTFFV
Trigger: GACAAAGAATGTGGAGAAGGCGTGCGCTTTCGAGCAATAGCATGCTCCAATATAAATGGAAGACCGGTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 72 bp ACAGCGTGGGGATCTCAGCTCATTATTGATCTTGCATaGAGACCAGTGTTCTACGACCCAGGAATATTGATC +
Preference number: 6 (lower is better)
Translates to: TAWGSQLIIDLA*RPVFYDPGILI
Trigger: GATCAATATTCCTGGGTCGTAGAACACTGGTCTCCATGCAAGATCAATAATGAGCTGAGATCCCCACGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CCA 72 bp TCAAAAGACTGGATTATGAATGTCCTTGACCTAGATTaGCGGCCTGTGGTCTCGAAGCTTCTTCCGTCAATG +
Preference number: 6 (lower is better)
Translates to: SKDWIMNVLDLD*RPVVSKLLPSM
Trigger: CATTGACGGAAGAAGCTTCGAGACCACAGGCCGCCAATCTAGGTCAAGGACATTCATAATCCAGTCTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CAA 72 bp GGTCAACCGGTCTTCCATTTATATTGGAGCATGCTATaGCTCGAAAGCGCACGCCTTCTCCACATTCTTTGT +
Preference number: 6 (lower is better)
Translates to: GQPVFHLYWSML*LESARLLHILC
Trigger: ACAAAGAATGTGGAGAAGGCGTGCGCTTTCGAGCAATAGCATGCTCCAATATAAATGGAAGACCGGTTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS TCA 72 bp GGAGTCTACATTTGCTCCATGGTCCCACCTTTAGGCTaGAGGAATATTCTTCTTTCCCAAGAGGACAGGAAA +
Preference number: 6 (lower is better)
Translates to: GVYICSMVPPLG*RNILLSQEDRK
Trigger: TTTCCTGTCCTCTTGGGAAAGAAGAATATTCCTTCAGCCTAAAGGTGGGACCATGGAGCAAATGTAGACTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
ENSMUST00000152305.3
CDS TCA 72 bp CACATGTTGCTTCTCCATTCCAGCCAATGGTCACATTaGGAGCAGTCACAAGAGTATTTTCAGAGCAGGAAC +
Preference number: 6 (lower is better)
Translates to: HMLLLHSSQWSH*EQSQEYFQSRN
Trigger: GTTCCTGCTCTGAAAATACTCTTGTGACTGCTCTCAATGTGACCATTGGCTGGAATGGAGAAGCAACATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS TCA 72 bp GACATCTTTTGGTCATTACTTGTCCCACATGACTCTTaGTACAGAAGACCTTTCGTGTCTGAATGCCCACCC +
Preference number: 6 (lower is better)
Translates to: DIFWSLLVPHDS*YRRPFVSECPP
Trigger: GGGTGGGCATTCAGACACGAAAGGTCTTCTGTATCAAGAGTCATGTGGGACAAGTAATGACCAAAAGATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS TCA 72 bp ACATGCTTCCTGAATGTAACCAGAGCTGTTGCAGAATaGGGGGTCAACCGGTCTTCCATTTATATTGGAGCA +
Preference number: 6 (lower is better)
Translates to: TCFLNVTRAVAE*GVNRSSIYIGA
Trigger: TGCTCCAATATAAATGGAAGACCGGTTGACCCCTCATTCTGCAACAGCTCTGGTTACATTCAGGAAGCATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CCA 72 bp TTCATCTGCTTGAGGCACTCTGTCATTTCTGCAGACTaGTTATCATCAGAGATGCATGAGACAGCTCTTGTC +
Preference number: 6 (lower is better)
Translates to: FICLRHSVISAD*LSSEMHETALV
Trigger: GACAAGAGCTGTCTCATGCATCTCTGATGATAACCAGTCTGCAGAAATGACAGAGTGCCTCAAGCAGATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CAA 72 bp TGGCCGTGTAGACTCTGGACATCTTTTGGTCATTACTaGTCCCACATGACTCTTGATACAGAAGACCTTTCG +
Preference number: 6 (lower is better)
Translates to: WPCRLWTSFGHY*SHMTLDTEDLS
Trigger: CGAAAGGTCTTCTGTATCAAGAGTCATGTGGGACAAGTAATGACCAAAAGATGTCCAGAGTCTACACGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CAA 72 bp ATTGGCTGCTTCCTGGATGATAATCCTGTATCGAGATaGTTTTATTGTAGTATTTCCTGGCTGGCAGGGCCG +
Preference number: 6 (lower is better)
Translates to: IGCFLDDNPVSR*FYCSISWLAGP
Trigger: CGGCCCTGCCAGCCAGGAAATACTACAATAAAACAATCTCGATACAGGATTATCATCCAGGAAGCAGCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS TCA 72 bp GGTCGTGTTTCTAGAACCTGTTGGGGGCAGCTATCTTaGTTCTCAAAAGACTGGATTATGAATGTCCTTGAC +
Preference number: 6 (lower is better)
Translates to: GRVSRTCWGQLS*FSKDWIMNVLD
Trigger: GTCAAGGACATTCATAATCCAGTCTTTTGAGAATCAAGATAGCTGCCCCCAACAGGTTCTAGAAACACGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS CCA 72 bp GAAACAAGGTCTTACAGTTTCTGGCCGTGTAGACTCTaGACATCTTTTGGTCATTACTTGTCCCACATGACT +
Preference number: 6 (lower is better)
Translates to: ETRSYSFWPCRL*TSFGHYLSHMT
Trigger: AGTCATGTGGGACAAGTAATGACCAAAAGATGTCCAGAGTCTACACGGCCAGAAACTGTAAGACCTTGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000040311.14
ENSMUST00000073527.13
CDS CAA 90 bp ATTATTGATCTTGCATGGAGACCAGTGTTCTACGACCCAGGAATATaGATCACACTCACTGTAACATGGGACTGCCTCATGAACCTGATT +
Preference number: 6 (lower is better)
Translates to: IIDLAWRPVFYDPGI*ITLTVTWDCLMNLI
Trigger: AATCAGGTTCATGAGGCAGTCCCATGTTACAGTGAGTGTGATCAATATTCCTGGGTCGTAGAACACTGGTCTCCATGCAAGATCAATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13
CDS GCA 72 bp GCACCACACAGTCCGCTCATTATTGTTCCAAAGACTTaGTTTCCATATGTAGTGATAACATTTGCCACCTGT +
Preference number: 6 (lower is better)
Translates to: APHSPLIIVPKT*FPYVVITFATC
Trigger: ACAGGTGGCAAATGTTATCACTACATATGGAAAGCAAGTCTTTGGAACAATAATGAGCGGACTGTGTGGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000073527.13