Pregenerated sensors for THRAP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043962Ensembl transcript IDs: ENSMUST00000080919.12, ENSMUST00000106142.8, ENSMUST00000123008.8, ENSMUST00000136157.8, ENSMUST00000163176.2, ENSMUST00000163459.8, ENSMUST00000169403.8
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGTCCTGTCCTCTGTCCAGTGAGACGGATGGCACCAGGGACACTCTaGTGTCGTGGGATGGATTCTGTGTGGCAAGTGGGTTGTGGGGTG | + |
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Preference number: 1 (lower is better) Translates to: RPVLCPVRRMAPGTL*CRGMDSVWQVGCGV Trigger: CACCCCACAACCCACTTGCCACACAGAATCCATCCCACGACAGCAGAGTGTCCCTGGTGCCATCCGTCTCACTGGACAGAGGACAGGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| 3UTR CCA 90 bp | CCTCTGTCCAGTGAGACGGATGGCACCAGGGACACTCTGCTGTCGTaGGATGGATTCTGTGTGGCAAGTGGGTTGTGGGGTGGCGTTTTC | + |
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Preference number: 1 (lower is better) Translates to: PLSSETDGTRDTLLS*DGFCVASGLWGGVF Trigger: GAAAACGCCACCCCACAACCCACTTGCCACACAGAATCCATCCCACGACAGCAGAGTGTCCCTGGTGCCATCCGTCTCACTGGACAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| 3UTR CCA 90 bp | CACCAGGGACACTCTGCTGTCGTGGGATGGATTCTGTGTGGCAAGTaGGTTGTGGGGTGGCGTTTTCAGGATCTTCTTGAGGCTCCTTGT | + |
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Preference number: 1 (lower is better) Translates to: HQGHSAVVGWILCGK*VVGWRFQDLLEAPC Trigger: ACAAGGAGCCTCAAGAAGATCCTGAAAACGCCACCCCACAACCCACTTGCCACACAGAATCCATCCCACGACAGCAGAGTGTCCCTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| 3UTR GCA 90 bp | TCAAGTCAATCGCCACGCCAAATGTGTAGACCAGGAGACAAGATCTaGCCAGAATTCTCGCTGTTTCAGAGTTGGTTGGCATATTTCGAT | + |
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Preference number: 1 (lower is better) Translates to: SSQSPRQMCRPGDKI*PEFSLFQSWLAYFD Trigger: ATCGAAATATGCCAACCAACTCTGAAACAGCGAGAATTCTGGGCAGATCTTGTCTCCTGGTCTACACATTTGGCGTGGCGATTGACTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123008.8 |
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| 3UTR CCA 90 bp | CAGGAGACAAGATCTGCCCAGAATTCTCGCTGTTTCAGAGTTGGTTaGCATATTTCGATTTGGTCTGTATCAGTTCAACTGTTGTTTAGC | + |
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Preference number: 1 (lower is better) Translates to: QETRSAQNSRCFRVG*HISIWSVSVQLLFS Trigger: GCTAAACAACAGTTGAACTGATACAGACCAAATCGAAATATGCCAACCAACTCTGAAACAGCGAGAATTCTGGGCAGATCTTGTCTCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123008.8 |
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| 3UTR-3UTR GCA 90 bp | ACACCACCAGCAGCAGCAGGAGCCCAGTGTGTGGTCTCATCTAGGCTCGGTGGCGCACCAGGGACACTCTaGTGTCGTGGGATGGATTCT | + |
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Preference number: 2 (lower is better) Translates to: TPPAAAGAQCVVSSRLGGAPGTL*CRGMDS Trigger: AGAATCCATCCCACGACAGCAGAGTGTCCCTGGTGC...GCCACCGAGCCTAGATGAGACCACACACTGGGCTCCTGCTGCTGCTGGTGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| 3UTR-3UTR CCA 90 bp | CCACACCACCAGCAGCAGCAGGAGCCCAGTGTGTGGTCTCATCTAGGCTCGGTGGACACTCTGCTGTCGTaGGATGGATTCTGTGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: PHHQQQQEPSVWSHLGSVDTLLS*DGFCVA Trigger: TGCCACACAGAATCCATCCCACGACAGCAGAGTGTC...CACCGAGCCTAGATGAGACCACACACTGGGCTCCTGCTGCTGCTGGTGGTGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| 3UTR-3UTR TCA 90 bp | AGTAAAGGGAAGTATGCACAACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGCCAGCCCAGGAGAAATaGGACAGAGCAGGGTGCATG | + |
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Preference number: 2 (lower is better) Translates to: SKGKYAQQPKSEGWGGRRPAQEK*DRAGCM Trigger: CATGCACCCTGCTCTGTCTCATTTCTCCTGGGCTGG...CCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTTGTGCATACTTCCCTTTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| 3UTR-3UTR CCA 90 bp | ACACCACCAGCAGCAGCAGGAGCCCAGTGTGTGGTCTCATCTAGGCTCGGTGGCAAGTGGGTTGTGGGGTaGCGTTTTCAGGATCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: TPPAAAGAQCVVSSRLGGKWVVG*RFQDLL Trigger: AAGAAGATCCTGAAAACGCCACCCCACAACCCACTT...GCCACCGAGCCTAGATGAGACCACACACTGGGCTCCTGCTGCTGCTGGTGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| 3UTR-3UTR CCA 90 bp | AAAGGGAAGTATGCACAACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGGTGGGGATGGATTCTGTGTaGCAAGTGGGTTGTGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: KGKYAQQPKSEGWGGRRVGMDSV*QVGCGV Trigger: CACCCCACAACCCACTTGCCACACAGAATCCATCCC...CACCCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTTGTGCATACTTCCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| 3UTR-3UTR TCA 90 bp | AGTAAAGGGAAGTATGCACAACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGTTCCACTCCTCTTGCTaGAGACCAGCAGGACTACAA | + |
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Preference number: 2 (lower is better) Translates to: SKGKYAQQPKSEGWGGRRFHSSC*RPAGLQ Trigger: TTGTAGTCCTGCTGGTCTTCAGCAAGAGGAGTGGAA...CCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTTGTGCATACTTCCCTTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| 3UTR-3UTR CCA 90 bp | ACCGGGATCGAGAACGGCCCCGACGAGGGCTGTATGCTTGCCGGTAGTTCTGCCTGTTTCAGAGTTGGTTaGCATATTTCGATTTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: TGIENGPDEGCMLAGSSACFRVG*HISIWS Trigger: AGACCAAATCGAAATATGCCAACCAACTCTGAAACA...GGCAGAACTACCGGCAAGCATACAGCCCTCGTCGGGGCCGTTCTCGATCCCGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123008.8 |
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| 3UTR-3UTR GCA 90 bp | TCACAAAAAGTTTCTTCTCTCATCATGGGCACTTGTTCCAAAACGCCTCTCTTTTTTCTGTCAAGTTCATaGCCAACGCACTCATTTTGT | + |
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Preference number: 2 (lower is better) Translates to: SQKVSSLIMGTCSKTPLFFLSSS*PTHSFC Trigger: ACAAAATGAGTGCGTTGGGCATGAACTTGACAGAAA...AAAGAGAGGCGTTTTGGAACAAGTGCCCATGATGAGAGAAGAAACTTTTTGTGA 40% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
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| 3UTR GCA 72 bp | TGGGGAGGGAGGAGGGTGCAGTCGGCGTCCAACAGATaGGCGCAGGCAGCGGTTCACCTGCTGGGGACCGCT | + |
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Preference number: 3 (lower is better) Translates to: WGGRRVQSASNR*AQAAVHLLGTA Trigger: AGCGGTCCCCAGCAGGTGAACCGCTGCCTGCGCGCATCTGTTGGACGCCGACTGCACCCTCCTCCCTCCCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| 3UTR GCA 72 bp | AACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGGTaGAGTCGGCGTCCAACAGATGCGCGCAGGCAGCGG | + |
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Preference number: 3 (lower is better) Translates to: NNPRAKAGEGGG*SRRPTDARRQR Trigger: CCGCTGCCTGCGCGCATCTGTTGGACGCCGACTGCACCCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| 3UTR CCA 72 bp | CCCCCACACCACCAGCAGCAGCAGGAGCCCAGTGTGTaGTCTCATCTAGGCTCGGTGGCAACGTCCTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: PPHHQQQQEPSV*SHLGSVATSCP Trigger: AGGACAGGACGTTGCCACCGAGCCTAGATGAGACCACACACTGGGCTCCTGCTGCTGCTGGTGGTGTGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| 3UTR GCA 72 bp | CTCTGTCCAGTGAGACGGATGGCACCAGGGACACTCTaGTGTCGTGGGATGGATTCTGTGTGGCAAGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: LCPVRRMAPGTL*CRGMDSVWQVG Trigger: ACCCACTTGCCACACAGAATCCATCCCACGACAGCAGAGTGTCCCTGGTGCCATCCGTCTCACTGGACAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| 3UTR CCA 72 bp | AGTGAGACGGATGGCACCAGGGACACTCTGCTGTCGTaGGATGGATTCTGTGTGGCAAGTGGGTTGTGGGGT | + |
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Preference number: 3 (lower is better) Translates to: SETDGTRDTLLS*DGFCVASGLWG Trigger: ACCCCACAACCCACTTGCCACACAGAATCCATCCCACGACAGCAGAGTGTCCCTGGTGCCATCCGTCTCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| 3UTR-3UTR CAA 90 bp | TGGGAGGACTGGGAGGAGGAGGAGGAGGACCTGGACCGGTCTCTTGCTCTGCGGTCTCTGTCTTTTCAGTaGATCTTTCTCTTGAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: WEDWEEEEEDLDRSLALRSLSFQ*IFLLSG Trigger: GCCACTCAAGAGAAAGATCAACTGAAAAGACAGAGA...CCGCAGAGCAAGAGACCGGTCCAGGTCCTCCTCCTCCTCCTCCCAGTCCTCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163176.2 |
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| 3UTR GCA 72 bp | TCCCTCTTGCACGAAATTGAAAGGTTCCCCGAGCTCTaGCGCCTCTTTCATTCGGACCCACGAAGTCTTTGG | + |
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Preference number: 3 (lower is better) Translates to: SLLHEIERFPEL*RLFHSDPRSLW Trigger: CCAAAGACTTCGTGGGTCCGAATGAAAGAGGCGGCAGAGCTCGGGGAACCTTTCAATTTCGTGCAAGAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163176.2 |
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| 3UTR CCA 72 bp | CACTCTGCTGTCGTGGGATGGATTCTGTGTGGCAAGTaGGTTGTGGGGTGGCGTTTTCAGGATCTTCTTGAG | + |
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Preference number: 3 (lower is better) Translates to: HSAVVGWILCGK*VVGWRFQDLLE Trigger: CTCAAGAAGATCCTGAAAACGCCACCCCACAACCCACTTGCCACACAGAATCCATCCCACGACAGCAGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| 3UTR CCA 72 bp | CTCTGCCGCCTCTTTCATTCGGACCCACGAAGTCTTTaGTCCCCAATCTGGATTTGTCGAAACCTGAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: LCRLFHSDPRSL*SPIWICRNLRC Trigger: GCACCTCAGGTTTCGACAAATCCAGATTGGGGACCAAAGACTTCGTGGGTCCGAATGAAAGAGGCGGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163176.2 |
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| 3UTR-3UTR CAA 90 bp | GGATCGAGAACGGCCCCGACGAGGGCTGTATGCTTGCCGGTAGTTCTGCCAATTCTGTTTCAGAGTTGGTaGGCATATTTCGATTTGGTC | + |
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Preference number: 3 (lower is better) Translates to: GSRTAPTRAVCLPVVLPILFQSW*AYFDLV Trigger: GACCAAATCGAAATATGCCAACCAACTCTGAAACAG...AATTGGCAGAACTACCGGCAAGCATACAGCCCTCGTCGGGGCCGTTCTCGATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123008.8 |
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| 3UTR GCA 72 bp | TCGCCACGCCAAATGTGTAGACCAGGAGACAAGATCTaGCCAGAATTCTCGCTGTTTCAGAGTTGGTTGGCA | + |
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Preference number: 3 (lower is better) Translates to: SPRQMCRPGDKI*PEFSLFQSWLA Trigger: TGCCAACCAACTCTGAAACAGCGAGAATTCTGGGCAGATCTTGTCTCCTGGTCTACACATTTGGCGTGGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123008.8 |
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| 3UTR-3UTR CAA 90 bp | AGTAAAGGGAAGTATGCACAACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGTGCAATGAAGAAAACTaGGTTTCTAATTGGGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: SKGKYAQQPKSEGWGGRRCNEEN*VSNWGG Trigger: CCCACCCCAATTAGAAACCAAGTTTTCTTCATTGCA...CCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTTGTGCATACTTCCCTTTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| 3UTR CCA 72 bp | TCTCGCTGTTTCAGAGTTGGTTGGCATATTTCGATTTaGTCTGTATCAGTTCAACTGTTGTTTAGCTTTGGC | + |
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Preference number: 3 (lower is better) Translates to: SRCFRVGWHISI*SVSVQLLFSFG Trigger: GCCAAAGCTAAACAACAGTTGAACTGATACAGACCAAATCGAAATATGCCAACCAACTCTGAAACAGCGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123008.8 |
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| CDS-3UTR GCA 90 bp | CCACACCACCAGCAGCAGCAGGAGCCCAGTGTGTGGTCTCATCTAGGCTCGGTGCCTGGACCGGTCTCTTaGTCTGCGGTGCTTCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: PHHQQQQEPSVWSHLGSVPGPVS*SAVLLL Trigger: CAGAAGAAGCACCGCAGAGCAAGAGACCGGTCCAGG...CACCGAGCCTAGATGAGACCACACACTGGGCTCCTGCTGCTGCTGGTGGTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CCA 90 bp | CCACACCACCAGCAGCAGCAGGAGCCCAGTGTGTGGTCTCATCTAGGCTCGGTGGAGCCATGGTCGAACTaGCCTTGGTGTGCTCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: PHHQQQQEPSVWSHLGSVEPWSN*PWCAPD Trigger: GTCTGGAGCACACCAAGGCCAGTTCGACCATGGCTC...CACCGAGCCTAGATGAGACCACACACTGGGCTCCTGCTGCTGCTGGTGGTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CCA 90 bp | GCCCAGTGTGTGGTCTCATCTAGGCTCGGTGGCAACGTCCTGTCCTCTGTCCAGAGGAGGAGGAGGACCTaGACCGGTCTCTTGCTCTGC | + |
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Preference number: 4 (lower is better) Translates to: AQCVVSSRLGGNVLSSVQRRRRT*TGLLLC Trigger: GCAGAGCAAGAGACCGGTCCAGGTCCTCCTCCTCCT...CTGGACAGAGGACAGGACGTTGCCACCGAGCCTAGATGAGACCACACACTGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR GCA 90 bp | ACACCACCAGCAGCAGCAGGAGCCCAGTGTGTGGTCTCATCTAGGCTCGGTGGCGAACTGGCCTTGGTGTaGTCCAGACTGATACCCAGC | + |
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Preference number: 4 (lower is better) Translates to: TPPAAAGAQCVVSSRLGGELALV*SRLIPS Trigger: GCTGGGTATCAGTCTGGAGCACACCAAGGCCAGTTC...GCCACCGAGCCTAGATGAGACCACACACTGGGCTCCTGCTGCTGCTGGTGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CCA 90 bp | GCCCAGTGTGTGGTCTCATCTAGGCTCGGTGGCAACGTCCTGTCCTCTGTCCAGGACTCAACTCTGCTGTaGTTGGAGGACGACCGGGAG | + |
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Preference number: 4 (lower is better) Translates to: AQCVVSSRLGGNVLSSVQDSTLL*LEDDRE Trigger: CTCCCGGTCGTCCTCCAACCACAGCAGAGTTGAGTC...CTGGACAGAGGACAGGACGTTGCCACCGAGCCTAGATGAGACCACACACTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CCA 90 bp | GCCCAGTGTGTGGTCTCATCTAGGCTCGGTGGCAACGTCCTGTCCTCTGTCCAGTACCTTTTGGGCGACTaGCTGCCTCGGAAGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: AQCVVSSRLGGNVLSSVQYLLGD*LPRKGF Trigger: GAAGCCCTTCCGAGGCAGCCAGTCGCCCAAAAGGTA...CTGGACAGAGGACAGGACGTTGCCACCGAGCCTAGATGAGACCACACACTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CCA 90 bp | ACACCACCAGCAGCAGCAGGAGCCCAGTGTGTGGTCTCATCTAGGCTCGGTGGCCTTGGGCGTGTACTCTaGATCCCACTCTTCTTCCCG | + |
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Preference number: 4 (lower is better) Translates to: TPPAAAGAQCVVSSRLGGLGRVL*IPLFFP Trigger: CGGGAAGAAGAGTGGGATCCAGAGTACACGCCCAAG...GCCACCGAGCCTAGATGAGACCACACACTGGGCTCCTGCTGCTGCTGGTGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR TCA 90 bp | AGTAAAGGGAAGTATGCACAACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGCCTTGGGGGCGGCGATaGACTTTTCTCCTGGACCGC | + |
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Preference number: 4 (lower is better) Translates to: SKGKYAQQPKSEGWGGRRPWGRR*TFLLDR Trigger: GCGGTCCAGGAGAAAAGTTCATCGCCGCCCCCAAGG...CCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTTGTGCATACTTCCCTTTACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CCA 90 bp | CCACACCACCAGCAGCAGCAGGAGCCCAGTGTGTGGTCTCATCTAGGCTCGGTGCCGGAAATTCTTTTCTaGCACAAAGCCCCTGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: PHHQQQQEPSVWSHLGSVPEILF*HKAPVP Trigger: GGGCACAGGGGCTTTGTGCCAGAAAAGAATTTCCGG...CACCGAGCCTAGATGAGACCACACACTGGGCTCCTGCTGCTGCTGGTGGTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR GCA 90 bp | AAAGGGAAGTATGCACAACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGGTGTTTTGGGCGACTGGCTaGCTCGGAAGGGCTTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: KGKYAQQPKSEGWGGRRVFWATG*LGRASQ Trigger: CTGAGAAGCCCTTCCGAGGCAGCCAGTCGCCCAAAA...CACCCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTTGTGCATACTTCCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CCA 90 bp | AGTAAAGGGAAGTATGCACAACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGTGGAGGACTGGGTTTTaGCACAGGGCTAGGGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: SKGKYAQQPKSEGWGGRRWRTGF*HRARAW Trigger: CCACGCCCTAGCCCTGTGCCAAAACCCAGTCCTCCA...CCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTTGTGCATACTTCCCTTTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CCA 90 bp | GCCCAGTGTGTGGTCTCATCTAGGCTCGGTGGCAACGTCCTGTCCTCTGTCCAGGAAGCTTATACCTTTTaGGCGACTGGCTGCCTCGGA | + |
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Preference number: 4 (lower is better) Translates to: AQCVVSSRLGGNVLSSVQEAYTF*ATGCLG Trigger: TCCGAGGCAGCCAGTCGCCCAAAAGGTATAAGCTTC...CTGGACAGAGGACAGGACGTTGCCACCGAGCCTAGATGAGACCACACACTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CCA 90 bp | ACACCACCAGCAGCAGCAGGAGCCCAGTGTGTGGTCTCATCTAGGCTCGGTGGCGACTTCTCTTCCTCCTaGTTTTTGCTTGCACCGGCT | + |
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Preference number: 4 (lower is better) Translates to: TPPAAAGAQCVVSSRLGGDFSSS*FLLAPA Trigger: AGCCGGTGCAAGCAAAAACCAGGAGGAAGAGAAGTC...GCCACCGAGCCTAGATGAGACCACACACTGGGCTCCTGCTGCTGCTGGTGGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR GCA 90 bp | ACACCACCAGCAGCAGCAGGAGCCCAGTGTGTGGTCTCATCTAGGCTCGGTGGCCTCCTGGTTTTTGCTTaGACCGGCTATGACTTTCGA | + |
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Preference number: 4 (lower is better) Translates to: TPPAAAGAQCVVSSRLGGLLVFA*TGYDFR Trigger: TCGAAAGTCATAGCCGGTGCAAGCAAAAACCAGGAG...GCCACCGAGCCTAGATGAGACCACACACTGGGCTCCTGCTGCTGCTGGTGGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR GCA 90 bp | AAAGGGAAGTATGCACAACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGGTGGCAGGCTCTCCCACTTaGCTGACTTCTCTTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: KGKYAQQPKSEGWGGRRVAGSPT*LTSLPP Trigger: AGGAGGAAGAGAAGTCAGGCAAGTGGGAGAGCCTGC...CACCCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTTGTGCATACTTCCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR GCA 90 bp | GCCCAGTGTGTGGTCTCATCTAGGCTCGGTGGCAACGTCCTGTCCTCTGTCCAGCTCAGGGTACTCCTCTaGTTTGTAGGAATGGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: AQCVVSSRLGGNVLSSVQLRVLL*FVGMGG Trigger: TCCTCCCATTCCTACAAAGCAGAGGAGTACCCTGAG...CTGGACAGAGGACAGGACGTTGCCACCGAGCCTAGATGAGACCACACACTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR GCA 90 bp | CCACACCACCAGCAGCAGCAGGAGCCCAGTGTGTGGTCTCATCTAGGCTCGGTGCCATCCTCTCCCTCTTaGACGAAATTGAAAGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: PHHQQQQEPSVWSHLGSVPSSPS*TKLKGS Trigger: GGAACCTTTCAATTTCGTGCAAGAGGGAGAGGATGG...CACCGAGCCTAGATGAGACCACACACTGGGCTCCTGCTGCTGCTGGTGGTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CCA 90 bp | GCCCAGTGTGTGGTCTCATCTAGGCTCGGTGGCAACGTCCTGTCCTCTGTCCAGCCACAGGGCTCTTTTTaGATGGACTCAAAGACCCAG | + |
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Preference number: 4 (lower is better) Translates to: AQCVVSSRLGGNVLSSVQPQGSF*MDSKTQ Trigger: CTGGGTCTTTGAGTCCATCCAAAAAGAGCCCTGTGG...CTGGACAGAGGACAGGACGTTGCCACCGAGCCTAGATGAGACCACACACTGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CCA 90 bp | CACTCTGCTGTCGTGGGATGGATTCTGTGTGGCAAGTGGGTTGTGGGGTGGCGTATCCGGACATTGACTTaGGCCTCCCGGGTAATGGAA | + |
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Preference number: 4 (lower is better) Translates to: HSAVVGWILCGKWVVGWRIRTLT*ASRVME Trigger: TTCCATTACCCGGGAGGCCCAAGTCAATGTCCGGAT...ACGCCACCCCACAACCCACTTGCCACACAGAATCCATCCCACGACAGCAGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR TCA 90 bp | CACTCTGCTGTCGTGGGATGGATTCTGTGTGGCAAGTGGGTTGTGGGGTGGCGTCTCCAGATACCTTTTTaGATATGCTGCCCCTCCCGA | + |
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Preference number: 4 (lower is better) Translates to: HSAVVGWILCGKWVVGWRLQIPF*ICCPSR Trigger: TCGGGAGGGGCAGCATATTCAAAAAGGTATCTGGAG...ACGCCACCCCACAACCCACTTGCCACACAGAATCCATCCCACGACAGCAGAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR GCA 90 bp | AAAGGGAAGTATGCACAACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGGTGTTTTCCTTCCCTGTGTaGAGGCTCTCCCACTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: KGKYAQQPKSEGWGGRRVFSFPV*RLSHLP Trigger: AGGCAAGTGGGAGAGCCTGCACACAGGGAAGGAAAA...CACCCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTTGTGCATACTTCCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CCA 90 bp | CACTCTGCTGTCGTGGGATGGATTCTGTGTGGCAAGTGGGTTGTGGGGTGGCGTGGACGCATTAGAAAGTaGAGGACTGGGTTTTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HSAVVGWILCGKWVVGWRGRIRK*RTGFWH Trigger: GTGCCAAAACCCAGTCCTCCACTTTCTAATGCGTCC...ACGCCACCCCACAACCCACTTGCCACACAGAATCCATCCCACGACAGCAGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
||
| CDS-3UTR CCA 90 bp | ACACCACCAGCAGCAGCAGGAGCCCAGTGTGTGGTCTCATCTAGGCTCGGTGGCTCTCAGAGTCCGTCTTaGGAGCAAATGGATCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: TPPAAAGAQCVVSSRLGGSQSPS*EQMDQI Trigger: AATCTGATCCATTTGCTCCCAAGACGGACTCTGAGA...GCCACCGAGCCTAGATGAGACCACACACTGGGCTCCTGCTGCTGCTGGTGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
||
| CDS-3UTR CCA 90 bp | GCCCAGTGTGTGGTCTCATCTAGGCTCGGTGGCAACGTCCTGTCCTCTGTCCAGGTAGCCAGGTTCCCGTaGACTTTTCAATTCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: AQCVVSSRLGGNVLSSVQVARFP*TFQFLM Trigger: CATGAGGAATTGAAAAGTCCACGGGAACCTGGCTAC...CTGGACAGAGGACAGGACGTTGCCACCGAGCCTAGATGAGACCACACACTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
||
| CDS-3UTR CCA 90 bp | GCCCAGTGTGTGGTCTCATCTAGGCTCGGTGGCAACGTCCTGTCCTCTGTCCAGCTTTGGTCCCCAATCTaGATTTGTCGAAACCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AQCVVSSRLGGNVLSSVQLWSPI*ICRNLR Trigger: CCTCAGGTTTCGACAAATCCAGATTGGGGACCAAAG...CTGGACAGAGGACAGGACGTTGCCACCGAGCCTAGATGAGACCACACACTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
||
| 3UTR CAA 72 bp | CTGCTGTCGTGGGATGGATTCTGTGTGGCAAGTGGGTaGTGGGGTGGCGTTTTCAGGATCTTCTTGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLSWDGFCVASG*WGGVFRIFLRL Trigger: GAGCCTCAAGAAGATCCTGAAAACGCCACCCCACAACCCACTTGCCACACAGAATCCATCCCACGACAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
||
| CDS-3UTR GCA 90 bp | CCACACCACCAGCAGCAGCAGGAGCCCAGTGTGTGGTCTCATCTAGGCTCGGTGCCATTCTCAGTCTTCTaGTCCTCCAGATACCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PHHQQQQEPSVWSHLGSVPFSVF*SSRYLF Trigger: AAAAAGGTATCTGGAGGAGCAGAAGACTGAGAATGG...CACCGAGCCTAGATGAGACCACACACTGGGCTCCTGCTGCTGCTGGTGGTGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
||
| CDS-3UTR CCA 90 bp | AAAGGGAAGTATGCACAACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGGTGAGGGCTCTTTTTGGATaGACTCAAAGACCCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KGKYAQQPKSEGWGGRRVRALFG*TQRPRA Trigger: GGCTCTGGGTCTTTGAGTCCATCCAAAAAGAGCCCT...CACCCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTTGTGCATACTTCCCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
||
| CDS-3UTR TCA 90 bp | CACTCTGCTGTCGTGGGATGGATTCTGTGTGGCAAGTGGGTTGTGGGGTGGCGTATGAGCTGGAGAATATaGTCTGGAACGAGACCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: HSAVVGWILCGKWVVGWRMSWRI*SGTRPR Trigger: TCTAGGTCTCGTTCCAGATCATATTCTCCAGCTCAT...ACGCCACCCCACAACCCACTTGCCACACAGAATCCATCCCACGACAGCAGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
||
| CDS-3UTR TCA 90 bp | ACACCACCAGCAGCAGCAGGAGCCCAGTGTGTGGTCTCATCTAGGCTCGGTGGCCTTTTCAATTCCTCATaGGTCAAACCATGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPPAAAGAQCVVSSRLGGLFNSS*VKPCFL Trigger: CAGAAAGCATGGTTTGACTCATGAGGAATTGAAAAG...GCCACCGAGCCTAGATGAGACCACACACTGGGCTCCTGCTGCTGCTGGTGGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
||
| CDS-3UTR CCA 90 bp | AAAGGGAAGTATGCACAACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGGTGGACCCACGAAGTCTTTaGTCCCCAATCTGGATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KGKYAQQPKSEGWGGRRVDPRSL*SPIWIC Trigger: ACAAATCCAGATTGGGGACCAAAGACTTCGTGGGTC...CACCCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTTGTGCATACTTCCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
||
| CDS-3UTR CCA 90 bp | CACTCTGCTGTCGTGGGATGGATTCTGTGTGGCAAGTGGGTTGTGGGGTGGCGTGATTCTGATACACTCTaGGGTGATTCCTTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HSAVVGWILCGKWVVGWRDSDTL*GDSFLC Trigger: ACAGAGAAAGGAATCACCCCAGAGTGTATCAGAATC...ACGCCACCCCACAACCCACTTGCCACACAGAATCCATCCCACGACAGCAGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
||
| CDS-3UTR TCA 90 bp | TATCACAAAAAGTTTCTTCTCTCATCATGGGCACTTGTTCCAAAACGCCTCTCTCCTTGGGGGCGGCGATaGACTTTTCTCCTGGACCGC | + |
|
Preference number: 4 (lower is better) Translates to: YHKKFLLSSWALVPKRLSPWGRR*TFLLDR Trigger: GCGGTCCAGGAGAAAAGTTCATCGCCGCCCCCAAGG...AGAGAGGCGTTTTGGAACAAGTGCCCATGATGAGAGAAGAAACTTTTTGTGATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
||
| CDS-3UTR TCA 90 bp | AGTAAAGGGAAGTATGCACAACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGTCAAACCATGCTTTCTaGATGTACTGGGGGAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: SKGKYAQQPKSEGWGGRRSNHAF*MYWGKC Trigger: ACATTTCCCCCAGTACATTCAGAAAGCATGGTTTGA...CCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTTGTGCATACTTCCCTTTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
||
| CDS-3UTR CCA 90 bp | AAAGGGAAGTATGCACAACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGGTGAGCGAGACCCAGACTTaGATTTGTTTGTTTTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: KGKYAQQPKSEGWGGRRVSETQT*ICLFLT Trigger: TGTCAAAAACAAACAAATCCAAGTCTGGGTCTCGCT...CACCCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTTGTGCATACTTCCCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
||
| CDS-3UTR TCA 90 bp | AGTAAAGGGAAGTATGCACAACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGGATCAGATTTCATTTTaGCATCAGCATCAGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKGKYAQQPKSEGWGGRRDQISF*HQHQRS Trigger: GCTTCTCTGATGCTGATGTCAAAATGAAATCTGATC...CCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTTGTGCATACTTCCCTTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
||
| CDS-3UTR CCA 90 bp | TCTCAAGCTCACCTCAATAGACTCTGGGGTCATTTACCATATTCTAACCACTTCGACTCAACTCTGCTGTaGTTGGAGGACGACCGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQAHLNRLWGHLPYSNHFDSTLL*LEDDRE Trigger: CTCCCGGTCGTCCTCCAACCACAGCAGAGTTGAGTC...GAAGTGGTTAGAATATGGTAAATGACCCCAGAGTCTATTGAGGTGAGCTTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTCAAGCTCACCTCAATAGACTCTGGGGTCATTTACCATATTCTAACCACTGGAGGACTGGGTTTTaGCACAGGGCTAGGGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSQAHLNRLWGHLPYSNHWRTGF*HRARAW Trigger: CCACGCCCTAGCCCTGTGCCAAAACCCAGTCCTCCA...GTGGTTAGAATATGGTAAATGACCCCAGAGTCTATTGAGGTGAGCTTGAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAAGCTCACCTCAATAGACTCTGGGGTCATTTACCATATTCTAACCACTTCTACCTTTTGGGCGACTaGCTGCCTCGGAAGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQAHLNRLWGHLPYSNHFYLLGD*LPRKGF Trigger: GAAGCCCTTCCGAGGCAGCCAGTCGCCCAAAAGGTA...GAAGTGGTTAGAATATGGTAAATGACCCCAGAGTCTATTGAGGTGAGCTTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
||
| CDS-3UTR GCA 90 bp | TATCACAAAAAGTTTCTTCTCTCATCATGGGCACTTGTTCCAAAACGCCTCTCTGAACTGGCCTTGGTGTaGTCCAGACTGATACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YHKKFLLSSWALVPKRLSELALV*SRLIPS Trigger: GCTGGGTATCAGTCTGGAGCACACCAAGGCCAGTTC...AGAGAGGCGTTTTGGAACAAGTGCCCATGATGAGAGAAGAAACTTTTTGTGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
||
| CDS-3UTR GCA 90 bp | TATCACAAAAAGTTTCTTCTCTCATCATGGGCACTTGTTCCAAAACGCCTCTCTGCAGGCTCTCCCACTTaGCTGACTTCTCTTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YHKKFLLSSWALVPKRLSAGSPT*LTSLPP Trigger: AGGAGGAAGAGAAGTCAGGCAAGTGGGAGAGCCTGC...AGAGAGGCGTTTTGGAACAAGTGCCCATGATGAGAGAAGAAACTTTTTGTGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAAAGTTTCTTCTCTCATCATGGGCACTTGTTCCAAAACGCCTCTCTTTTTGAGCCATGGTCGAACTaGCCTTGGTGTGCTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TKSFFSHHGHLFQNASLFEPWSN*PWCAPD Trigger: GTCTGGAGCACACCAAGGCCAGTTCGACCATGGCTC...AAAAAGAGAGGCGTTTTGGAACAAGTGCCCATGATGAGAGAAGAAACTTTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
||
| CDS-3UTR TCA 90 bp | TCTCAAGCTCACCTCAATAGACTCTGGGGTCATTTACCATATTCTAACCACTTCCTCCAGATACCTTTTTaGATATGCTGCCCCTCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SQAHLNRLWGHLPYSNHFLQIPF*ICCPSR Trigger: TCGGGAGGGGCAGCATATTCAAAAAGGTATCTGGAG...GAAGTGGTTAGAATATGGTAAATGACCCCAGAGTCTATTGAGGTGAGCTTGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
||
| CDS-3UTR GCA 90 bp | TATCACAAAAAGTTTCTTCTCTCATCATGGGCACTTGTTCCAAAACGCCTCTCTTTTTCCTTCCCTGTGTaGAGGCTCTCCCACTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YHKKFLLSSWALVPKRLSFSFPV*RLSHLP Trigger: AGGCAAGTGGGAGAGCCTGCACACAGGGAAGGAAAA...AGAGAGGCGTTTTGGAACAAGTGCCCATGATGAGAGAAGAAACTTTTTGTGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
||
| CDS-3UTR CCA 90 bp | AGACCAGGAGACAAGATCTGCCCAGAATTCTCGCTGTTTCAGAGTTGGTTGGCAAGCGAGACCCAGACTTaGATTTGTTTGTTTTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: RPGDKICPEFSLFQSWLASETQT*ICLFLT Trigger: TGTCAAAAACAAACAAATCCAAGTCTGGGTCTCGCT...TGCCAACCAACTCTGAAACAGCGAGAATTCTGGGCAGATCTTGTCTCCTGGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123008.8 |
||
| CDS-3UTR CCA 90 bp | TATCACAAAAAGTTTCTTCTCTCATCATGGGCACTTGTTCCAAAACGCCTCTCTGAAGCTTATACCTTTTaGGCGACTGGCTGCCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: YHKKFLLSSWALVPKRLSEAYTF*ATGCLG Trigger: TCCGAGGCAGCCAGTCGCCCAAAAGGTATAAGCTTC...AGAGAGGCGTTTTGGAACAAGTGCCCATGATGAGAGAAGAAACTTTTTGTGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTCAAGCTCACCTCAATAGACTCTGGGGTCATTTACCATATTCTAACCACCCGGAAATTCTTTTCTaGCACAAAGCCCCTGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FSQAHLNRLWGHLPYSNHPEILF*HKAPVP Trigger: GGGCACAGGGGCTTTGTGCCAGAAAAGAATTTCCGG...GTGGTTAGAATATGGTAAATGACCCCAGAGTCTATTGAGGTGAGCTTGAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTCAAGCTCACCTCAATAGACTCTGGGGTCATTTACCATATTCTAACCACTATCCGGACATTGACTTaGGCCTCCCGGGTAATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLKLTSIDSGVIYHILTTIRTLT*ASRVME Trigger: TTCCATTACCCGGGAGGCCCAAGTCAATGTCCGGAT...AGTGGTTAGAATATGGTAAATGACCCCAGAGTCTATTGAGGTGAGCTTGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTCAAGCTCACCTCAATAGACTCTGGGGTCATTTACCATATTCTAACCACTCCACAGGGCTCTTTTTaGATGGACTCAAAGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLKLTSIDSGVIYHILTTPQGSF*MDSKTQ Trigger: CTGGGTCTTTGAGTCCATCCAAAAAGAGCCCTGTGG...AGTGGTTAGAATATGGTAAATGACCCCAGAGTCTATTGAGGTGAGCTTGAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
||
| CDS-3UTR GCA 90 bp | TATCACAAAAAGTTTCTTCTCTCATCATGGGCACTTGTTCCAAAACGCCTCTCTCTCCTGGTTTTTGCTTaGACCGGCTATGACTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: YHKKFLLSSWALVPKRLSLLVFA*TGYDFR Trigger: TCGAAAGTCATAGCCGGTGCAAGCAAAAACCAGGAG...AGAGAGGCGTTTTGGAACAAGTGCCCATGATGAGAGAAGAAACTTTTTGTGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAAAGTTTCTTCTCTCATCATGGGCACTTGTTCCAAAACGCCTCTCTTTTTAGGGCTCTTTTTGGATaGACTCAAAGACCCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TKSFFSHHGHLFQNASLFRALFG*TQRPRA Trigger: GGCTCTGGGTCTTTGAGTCCATCCAAAAAGAGCCCT...AAAAAGAGAGGCGTTTTGGAACAAGTGCCCATGATGAGAGAAGAAACTTTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
||
| CDS-3UTR CCA 90 bp | TCTCAAGCTCACCTCAATAGACTCTGGGGTCATTTACCATATTCTAACCACTTCTCTCAGAGTCCGTCTTaGGAGCAAATGGATCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: SQAHLNRLWGHLPYSNHFSQSPS*EQMDQI Trigger: AATCTGATCCATTTGCTCCCAAGACGGACTCTGAGA...GAAGTGGTTAGAATATGGTAAATGACCCCAGAGTCTATTGAGGTGAGCTTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTCAAGCTCACCTCAATAGACTCTGGGGTCATTTACCATATTCTAACCACGTAGCCAGGTTCCCGTaGACTTTTCAATTCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: FSQAHLNRLWGHLPYSNHVARFP*TFQFLM Trigger: CATGAGGAATTGAAAAGTCCACGGGAACCTGGCTAC...GTGGTTAGAATATGGTAAATGACCCCAGAGTCTATTGAGGTGAGCTTGAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000106142.8 ENSMUST00000163176.2 |
||
| 3UTR CAA 72 bp | AGACAAGATCTGCCCAGAATTCTCGCTGTTTCAGAGTaGGTTGGCATATTTCGATTTGGTCTGTATCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RQDLPRILAVSE*VGIFRFGLYQF Trigger: GAACTGATACAGACCAAATCGAAATATGCCAACCAACTCTGAAACAGCGAGAATTCTGGGCAGATCTTGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123008.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTCAAGCTCACCTCAATAGACTCTGGGGTCATTTACCATATTCTAACCACTATGAGCTGGAGAATATaGTCTGGAACGAGACCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLKLTSIDSGVIYHILTTMSWRI*SGTRPR Trigger: TCTAGGTCTCGTTCCAGATCATATTCTCCAGCTCAT...AGTGGTTAGAATATGGTAAATGACCCCAGAGTCTATTGAGGTGAGCTTGAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
||
| CDS-3UTR TCA 90 bp | TCTCAAGCTCACCTCAATAGACTCTGGGGTCATTTACCATATTCTAACCACTTCTCAAACCATGCTTTCTaGATGTACTGGGGGAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: SQAHLNRLWGHLPYSNHFSNHAF*MYWGKC Trigger: ACATTTCCCCCAGTACATTCAGAAAGCATGGTTTGA...GAAGTGGTTAGAATATGGTAAATGACCCCAGAGTCTATTGAGGTGAGCTTGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106142.8 ENSMUST00000163176.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTCAAGCTCACCTCAATAGACTCTGGGGTCATTTACCATATTCTAACCACTCCATTCTCAGTCTTCTaGTCCTCCAGATACCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLKLTSIDSGVIYHILTTPFSVF*SSRYLF Trigger: AAAAAGGTATCTGGAGGAGCAGAAGACTGAGAATGG...AGTGGTTAGAATATGGTAAATGACCCCAGAGTCTATTGAGGTGAGCTTGAGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
||
| CDS-3UTR CCA 90 bp | GACTGCATGAGTTTAAACCTCTTAATAACAGTGTTATGTGCACATCATTGCAAAGGACGCATTAGAAAGTaGAGGACTGGGTTTTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DCMSLNLLITVLCAHHCKGRIRK*RTGFWH Trigger: GTGCCAAAACCCAGTCCTCCACTTTCTAATGCGTCC...TTTGCAATGATGTGCACATAACACTGTTATTAAGAGGTTTAAACTCATGCAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
||
| CDS-3UTR CCA 90 bp | GACTGCATGAGTTTAAACCTCTTAATAACAGTGTTATGTGCACATCATTGCAAAGACTTCTCTTCCTCCTaGTTTTTGCTTGCACCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DCMSLNLLITVLCAHHCKDFSSS*FLLAPA Trigger: AGCCGGTGCAAGCAAAAACCAGGAGGAAGAGAAGTC...TTTGCAATGATGTGCACATAACACTGTTATTAAGAGGTTTAAACTCATGCAGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAAAGTTTCTTCTCTCATCATGGGCACTTGTTCCAAAACGCCTCTCTTTTTTCAAACCATGCTTTCTaGATGTACTGGGGGAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: TKSFFSHHGHLFQNASLFSNHAF*MYWGKC Trigger: ACATTTCCCCCAGTACATTCAGAAAGCATGGTTTGA...AAAAAGAGAGGCGTTTTGGAACAAGTGCCCATGATGAGAGAAGAAACTTTTTGT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000106142.8 ENSMUST00000163176.2 |
||
| CDS-3UTR TCA 90 bp | TCACAAAAAGTTTCTTCTCTCATCATGGGCACTTGTTCCAAAACGCCTCTCTTTCTTTTCAATTCCTCATaGGTCAAACCATGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SQKVSSLIMGTCSKTPLFLFNSS*VKPCFL Trigger: CAGAAAGCATGGTTTGACTCATGAGGAATTGAAAAG...AAAGAGAGGCGTTTTGGAACAAGTGCCCATGATGAGAGAAGAAACTTTTTGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106142.8 ENSMUST00000163176.2 |
||
| CDS-3UTR TCA 90 bp | TATCACAAAAAGTTTCTTCTCTCATCATGGGCACTTGTTCCAAAACGCCTCTCTCTTTTCAATTCCTCATaGGTCAAACCATGCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YHKKFLLSSWALVPKRLSLFNSS*VKPCFL Trigger: CAGAAAGCATGGTTTGACTCATGAGGAATTGAAAAG...AGAGAGGCGTTTTGGAACAAGTGCCCATGATGAGAGAAGAAACTTTTTGTGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106142.8 ENSMUST00000163176.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCTCAAGCTCACCTCAATAGACTCTGGGGTCATTTACCATATTCTAACCACAGCGAGACCCAGACTTaGATTTGTTTGTTTTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: FSQAHLNRLWGHLPYSNHSETQT*ICLFLT Trigger: TGTCAAAAACAAACAAATCCAAGTCTGGGTCTCGCT...GTGGTTAGAATATGGTAAATGACCCCAGAGTCTATTGAGGTGAGCTTGAGAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
||
| CDS-3UTR CCA 90 bp | GACTGCATGAGTTTAAACCTCTTAATAACAGTGTTATGTGCACATCATTGCAAAGATTCTGATACACTCTaGGGTGATTCCTTTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DCMSLNLLITVLCAHHCKDSDTL*GDSFLC Trigger: ACAGAGAAAGGAATCACCCCAGAGTGTATCAGAATC...TTTGCAATGATGTGCACATAACACTGTTATTAAGAGGTTTAAACTCATGCAGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
||
| CDS-3UTR CAA 90 bp | CCACACCACCAGCAGCAGCAGGAGCCCAGTGTGTGGTCTCATCTAGGCTCGGTGCATCCGGACATTGACTaGGGCCTCCCGGGTAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: PHHQQQQEPSVWSHLGSVHPDID*GLPGNG Trigger: TCCATTACCCGGGAGGCCCAAGTCAATGTCCGGATG...CACCGAGCCTAGATGAGACCACACACTGGGCTCCTGCTGCTGCTGGTGGTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
||
| CDS-3UTR CAA 90 bp | ACACCACCAGCAGCAGCAGGAGCCCAGTGTGTGGTCTCATCTAGGCTCGGTGGCTCTCAGAGGTCTTCCTaGGGGGCGGCGATGAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: TPPAAAGAQCVVSSRLGGSQRSS*GAAMNF Trigger: AAAGTTCATCGCCGCCCCCAAGGAAGACCTCTGAGA...GCCACCGAGCCTAGATGAGACCACACACTGGGCTCCTGCTGCTGCTGGTGGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
||
| CDS TCA 90 bp | AAAGACCCAGAGCCATGGTCGAACTGGCCTTGGTGTGCTCCAGACTaGTACCCAGCACCCCCTGACATAGACGAGCCCATCTGGGACGCA | + |
|
Preference number: 5 (lower is better) Translates to: KDPEPWSNWPWCAPD*YPAPPDIDEPIWDA Trigger: TGCGTCCCAGATGGGCTCGTCTATGTCAGGGGGTGCTGGGTATCAGTCTGGAGCACACCAAGGCCAGTTCGACCATGGCTCTGGGTCTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080919.12 ENSMUST00000106142.8 |
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| CDS-3UTR CAA 90 bp | AAAGGGAAGTATGCACAACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGGTGGAGTCCATCCGGACATaGACTTGGGCCTCCCGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KGKYAQQPKSEGWGGRRVESIRT*TWASRV Trigger: TACCCGGGAGGCCCAAGTCAATGTCCGGATGGACTC...CACCCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTTGTGCATACTTCCCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CAA 90 bp | AAAGGGAAGTATGCACAACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGGTGCGAAGCTTATACCTTTaGGGCGACTGGCTGCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: KGKYAQQPKSEGWGGRRVRSLYL*GDWLPR Trigger: CCGAGGCAGCCAGTCGCCCAAAAGGTATAAGCTTCG...CACCCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTTGTGCATACTTCCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CAA 90 bp | AGTAAAGGGAAGTATGCACAACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGCCACTTTCACTCCTCTaGGACCCTCCACGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SKGKYAQQPKSEGWGGRRPLSLL*DPPRSS Trigger: GGAGGAGCGTGGAGGGTCCAAGAGGAGTGAAAGTGG...CCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTTGTGCATACTTCCCTTTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CAA 90 bp | AGTAAAGGGAAGTATGCACAACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGTTCTCCTGGACCGCCTaGTACGCAGTCACCCGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SKGKYAQQPKSEGWGGRRFSWTA*YAVTRK Trigger: TTTCCGGGTGACTGCGTACAAGGCGGTCCAGGAGAA...CCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTTGTGCATACTTCCCTTTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS GCA 90 bp | TTGTACGCAGTCACCCGGAAATTCTTTTCTGGCACAAAGCCCCTGTaGCCACTTTCACTCCTCTTGGACCCTCCACGCTCCTCCTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LYAVTRKFFSGTKPL*PLSLLLDPPRSSFR Trigger: CCGAAAGGAGGAGCGTGGAGGGTCCAAGAGGAGTGAAAGTGGGCACAGGGGCTTTGTGCCAGAAAAGAATTTCCGGGTGACTGCGTACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080919.12 ENSMUST00000106142.8 |
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| CDS CCA 90 bp | TTTCTCCTGGACCGCCTTGTACGCAGTCACCCGGAAATTCTTTTCTaGCACAAAGCCCCTGTGCCCACTTTCACTCCTCTTGGACCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLLDRLVRSHPEILF*HKAPVPTFTPLGPS Trigger: GGAGGGTCCAAGAGGAGTGAAAGTGGGCACAGGGGCTTTGTGCCAGAAAAGAATTTCCGGGTGACTGCGTACAAGGCGGTCCAGGAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080919.12 ENSMUST00000106142.8 |
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| CDS-3UTR CAA 90 bp | AAAGGGAAGTATGCACAACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGGTGACGAGGGCTGTATGCTaGCCGGTAGTTCTGCCAATT | + |
|
Preference number: 5 (lower is better) Translates to: KGKYAQQPKSEGWGGRRVTRAVC*PVVLPI Trigger: AATTGGCAGAACTACCGGCAAGCATACAGCCCTCGT...CACCCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTTGTGCATACTTCCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CAA 90 bp | CACTCTGCTGTCGTGGGATGGATTCTGTGTGGCAAGTGGGTTGTGGGGTGGCGTTTCTCAGAGTCCGTCTaGGGAGCAAATGGATCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: HSAVVGWILCGKWVVGWRFSESV*GANGSD Trigger: ATCTGATCCATTTGCTCCCAAGACGGACTCTGAGAA...ACGCCACCCCACAACCCACTTGCCACACAGAATCCATCCCACGACAGCAGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CAA 90 bp | AGTAAAGGGAAGTATGCACAACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGGAGGAAAAGTCTCCTTaGCTTCCCAGCTTGTCACGG | + |
|
Preference number: 5 (lower is better) Translates to: SKGKYAQQPKSEGWGGRREEKSP*LPSLSR Trigger: CCGTGACAAGCTGGGAAGCAAAGGAGACTTTTCCTC...CCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTTGTGCATACTTCCCTTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CAA 90 bp | CCACACCACCAGCAGCAGCAGGAGCCCAGTGTGTGGTCTCATCTAGGCTCGGTGTCTCCTTATCGGCATTaGTTTGTTTCTGCTCCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: PHHQQQQEPSVWSHLGSVSPYRH*FVSAPY Trigger: ATAAGGAGCAGAAACAAACAAATGCCGATAAGGAGA...CACCGAGCCTAGATGAGACCACACACTGGGCTCCTGCTGCTGCTGGTGGTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CAA 90 bp | GCCCAGTGTGTGGTCTCATCTAGGCTCGGTGGCAACGTCCTGTCCTCTGTCCAGTCTCTGTCTTTTCAGTaGATCTTTCTCTTGAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: AQCVVSSRLGGNVLSSVQSLSFQ*IFLLSG Trigger: GCCACTCAAGAGAAAGATCAACTGAAAAGACAGAGA...CTGGACAGAGGACAGGACGTTGCCACCGAGCCTAGATGAGACCACACACTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CAA 90 bp | AGTAAAGGGAAGTATGCACAACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGCCCATCCTCTCCCTCTaGCACGAAATTGAAAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SKGKYAQQPKSEGWGGRRPILSL*HEIERF Trigger: GAACCTTTCAATTTCGTGCAAGAGGGAGAGGATGGG...CCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTTGTGCATACTTCCCTTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CAA 90 bp | AAAGGGAAGTATGCACAACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGGTGTTCCTTCCCTTACTTTaGTCCTTATCGTGCTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: KGKYAQQPKSEGWGGRRVFLPLL*SLSCSS Trigger: GGATGAGCACGATAAGGACAAAAGTAAGGGAAGGAA...CACCCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTTGTGCATACTTCCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CAA 90 bp | AGTAAAGGGAAGTATGCACAACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGGAGCGAGACCCAGACTaGGATTTGTTTGTTTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SKGKYAQQPKSEGWGGRRERDPD*DLFVFD Trigger: GTCAAAAACAAACAAATCCAAGTCTGGGTCTCGCTC...CCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTTGTGCATACTTCCCTTTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CAA 90 bp | CACTCTGCTGTCGTGGGATGGATTCTGTGTGGCAAGTGGGTTGTGGGGTGGCGTCTTATCGGCATTTGTTaGTTTCTGCTCCTTATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HSAVVGWILCGKWVVGWRLIGIC*FLLLIL Trigger: AAGGATAAGGAGCAGAAACAAACAAATGCCGATAAG...ACGCCACCCCACAACCCACTTGCCACACAGAATCCATCCCACGACAGCAGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CAA 90 bp | AGTAAAGGGAAGTATGCACAACAACCCAAGAGCGAAGGCTGGGGAGGGAGGAGGACTTTCGACATAAATTaGGGCTCATCATCAAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: SKGKYAQQPKSEGWGGRRTFDIN*GSSSNS Trigger: CGAGTTTGATGATGAGCCCAAATTTATGTCGAAAGT...CCTCCTCCCTCCCCAGCCTTCGCTCTTGGGTTGTTGTGCATACTTCCCTTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080919.12 |
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| CDS-3UTR CAA 90 bp | TTTTCTCAAGCTCACCTCAATAGACTCTGGGGTCATTTACCATATTCTAACCACCCACTTTCACTCCTCTaGGACCCTCCACGCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSQAHLNRLWGHLPYSNHPLSLL*DPPRSS Trigger: GGAGGAGCGTGGAGGGTCCAAGAGGAGTGAAAGTGG...GTGGTTAGAATATGGTAAATGACCCCAGAGTCTATTGAGGTGAGCTTGAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
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| CDS-3UTR CAA 90 bp | TCTCAAGCTCACCTCAATAGACTCTGGGGTCATTTACCATATTCTAACCACTTCTTCTCCTGGACCGCCTaGTACGCAGTCACCCGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SQAHLNRLWGHLPYSNHFFSWTA*YAVTRK Trigger: TTTCCGGGTGACTGCGTACAAGGCGGTCCAGGAGAA...GAAGTGGTTAGAATATGGTAAATGACCCCAGAGTCTATTGAGGTGAGCTTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
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| CDS-3UTR CAA 90 bp | TCTCAAGCTCACCTCAATAGACTCTGGGGTCATTTACCATATTCTAACCACTTCCATCCGGACATTGACTaGGGCCTCCCGGGTAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: SQAHLNRLWGHLPYSNHFHPDID*GLPGNG Trigger: TCCATTACCCGGGAGGCCCAAGTCAATGTCCGGATG...GAAGTGGTTAGAATATGGTAAATGACCCCAGAGTCTATTGAGGTGAGCTTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
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| CDS-3UTR CAA 90 bp | TTTTCTCAAGCTCACCTCAATAGACTCTGGGGTCATTTACCATATTCTAACCACGAGTCCATCCGGACATaGACTTGGGCCTCCCGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: FSQAHLNRLWGHLPYSNHESIRT*TWASRV Trigger: TACCCGGGAGGCCCAAGTCAATGTCCGGATGGACTC...GTGGTTAGAATATGGTAAATGACCCCAGAGTCTATTGAGGTGAGCTTGAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
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| CDS-3UTR CAA 90 bp | TTTCTCAAGCTCACCTCAATAGACTCTGGGGTCATTTACCATATTCTAACCACTCGAAGCTTATACCTTTaGGGCGACTGGCTGCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: FLKLTSIDSGVIYHILTTRSLYL*GDWLPR Trigger: CCGAGGCAGCCAGTCGCCCAAAAGGTATAAGCTTCG...AGTGGTTAGAATATGGTAAATGACCCCAGAGTCTATTGAGGTGAGCTTGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
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| CDS-3UTR CAA 90 bp | TGTAGACCAGGAGACAAGATCTGCCCAGAATTCTCGCTGTTTCAGAGTTGGTTGGAGCGAGACCCAGACTaGGATTTGTTTGTTTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: CRPGDKICPEFSLFQSWLERDPD*DLFVFD Trigger: GTCAAAAACAAACAAATCCAAGTCTGGGTCTCGCTC...CAACCAACTCTGAAACAGCGAGAATTCTGGGCAGATCTTGTCTCCTGGTCTACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123008.8 |
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| CDS-3UTR CAA 90 bp | TTTCTCAAGCTCACCTCAATAGACTCTGGGGTCATTTACCATATTCTAACCACTACGAGGGCTGTATGCTaGCCGGTAGTTCTGCCAATT | + |
|
Preference number: 5 (lower is better) Translates to: FLKLTSIDSGVIYHILTTTRAVC*PVVLPI Trigger: AATTGGCAGAACTACCGGCAAGCATACAGCCCTCGT...AGTGGTTAGAATATGGTAAATGACCCCAGAGTCTATTGAGGTGAGCTTGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
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| CDS-3UTR CAA 90 bp | TCTCAAGCTCACCTCAATAGACTCTGGGGTCATTTACCATATTCTAACCACTTCGAGCGAGACCCAGACTaGGATTTGTTTGTTTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SQAHLNRLWGHLPYSNHFERDPD*DLFVFD Trigger: GTCAAAAACAAACAAATCCAAGTCTGGGTCTCGCTC...GAAGTGGTTAGAATATGGTAAATGACCCCAGAGTCTATTGAGGTGAGCTTGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
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| CDS-3UTR CAA 90 bp | TTTCTCAAGCTCACCTCAATAGACTCTGGGGTCATTTACCATATTCTAACCACTTTCTCAGAGTCCGTCTaGGGAGCAAATGGATCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: FLKLTSIDSGVIYHILTTFSESV*GANGSD Trigger: ATCTGATCCATTTGCTCCCAAGACGGACTCTGAGAA...AGTGGTTAGAATATGGTAAATGACCCCAGAGTCTATTGAGGTGAGCTTGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
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| CDS-3UTR CAA 90 bp | GACTGCATGAGTTTAAACCTCTTAATAACAGTGTTATGTGCACATCATTGCAAATCTCAGAGGTCTTCCTaGGGGGCGGCGATGAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: DCMSLNLLITVLCAHHCKSQRSS*GAAMNF Trigger: AAAGTTCATCGCCGCCCCCAAGGAAGACCTCTGAGA...TTTGCAATGATGTGCACATAACACTGTTATTAAGAGGTTTAAACTCATGCAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
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| CDS-3UTR CAA 90 bp | GACTGCATGAGTTTAAACCTCTTAATAACAGTGTTATGTGCACATCATTGCAAAGAGGAAAAGTCTCCTTaGCTTCCCAGCTTGTCACGG | + |
|
Preference number: 5 (lower is better) Translates to: DCMSLNLLITVLCAHHCKEEKSP*LPSLSR Trigger: CCGTGACAAGCTGGGAAGCAAAGGAGACTTTTCCTC...TTTGCAATGATGTGCACATAACACTGTTATTAAGAGGTTTAAACTCATGCAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
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| CDS-3UTR CAA 90 bp | TTTTCTCAAGCTCACCTCAATAGACTCTGGGGTCATTTACCATATTCTAACCACTCTCCTTATCGGCATTaGTTTGTTTCTGCTCCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: FSQAHLNRLWGHLPYSNHSPYRH*FVSAPY Trigger: ATAAGGAGCAGAAACAAACAAATGCCGATAAGGAGA...GTGGTTAGAATATGGTAAATGACCCCAGAGTCTATTGAGGTGAGCTTGAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
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| CDS-3UTR CAA 90 bp | TATCACAAAAAGTTTCTTCTCTCATCATGGGCACTTGTTCCAAAACGCCTCTCTACTTTCGACATAAATTaGGGCTCATCATCAAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: YHKKFLLSSWALVPKRLSTFDIN*GSSSNS Trigger: CGAGTTTGATGATGAGCCCAAATTTATGTCGAAAGT...AGAGAGGCGTTTTGGAACAAGTGCCCATGATGAGAGAAGAAACTTTTTGTGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
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| CDS-3UTR CAA 90 bp | ACAAAAAGTTTCTTCTCTCATCATGGGCACTTGTTCCAAAACGCCTCTCTTTTTCTTATCGGCATTTGTTaGTTTCTGCTCCTTATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: TKSFFSHHGHLFQNASLFLIGIC*FLLLIL Trigger: AAGGATAAGGAGCAGAAACAAACAAATGCCGATAAG...AAAAAGAGAGGCGTTTTGGAACAAGTGCCCATGATGAGAGAAGAAACTTTTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
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| CDS-3UTR CAA 90 bp | GACTGCATGAGTTTAAACCTCTTAATAACAGTGTTATGTGCACATCATTGCAAATTCCTTCCCTTACTTTaGTCCTTATCGTGCTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: DCMSLNLLITVLCAHHCKFLPLL*SLSCSS Trigger: GGATGAGCACGATAAGGACAAAAGTAAGGGAAGGAA...TTTGCAATGATGTGCACATAACACTGTTATTAAGAGGTTTAAACTCATGCAGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106142.8 |
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| CDS CAA 72 bp | GGAAAGGCTCCTCGGCCTCGGCCTCGGCCCATCCACTaGTCGCTGCCCTCGCCTTCCCGGTCGTCATGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: GKAPRPRPRPIH*SLPSPSRSSCK Trigger: CTTGCATGACGACCGGGAAGGCGAGGGCAGCGACAAGTGGATGGGCCGAGGCCGAGGCCGAGGAGCCTTTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080919.12 ENSMUST00000163459.8 |
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| CDS TCA 72 bp | GCCTTGGTGTGCTCCAGACTGATACCCAGCACCCCCTaGCATAGACGAGCCCATCTGGGACGCATTAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: ALVCSRLIPSTP*HRRAHLGRIRK Trigger: CTTTCTAATGCGTCCCAGATGGGCTCGTCTATGTCAGGGGGTGCTGGGTATCAGTCTGGAGCACACCAAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080919.12 ENSMUST00000106142.8 |
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| CDS GCA 72 bp | GTCACCCGGAAATTCTTTTCTGGCACAAAGCCCCTGTaGCCACTTTCACTCCTCTTGGACCCTCCACGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VTRKFFSGTKPL*PLSLLLDPPRS Trigger: GGAGCGTGGAGGGTCCAAGAGGAGTGAAAGTGGGCACAGGGGCTTTGTGCCAGAAAAGAATTTCCGGGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080919.12 ENSMUST00000106142.8 |
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| CDS TCA 72 bp | TCTGGAACGAGACCTAGAACTCAGCCTGCGCTTCCTTaGACGAGAGACAGATCGGCTTCGGGACCGAGACTT | + |
|
Preference number: 6 (lower is better) Translates to: SGTRPRTQPALP*TRDRSASGPRL Trigger: AAGTCTCGGTCCCGAAGCCGATCTGTCTCTCGTTCAAGGAAGCGCAGGCTGAGTTCTAGGTCTCGTTCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080919.12 ENSMUST00000106142.8 ENSMUST00000136157.8 |
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| CDS CCA 72 bp | GAGGTCTTCCTTGGGGGCGGCGATGAACTTTTCTCCTaGACCGCCTTGTACGCAGTCACCCGGAAATTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: EVFLGGGDELFS*TALYAVTRKFF Trigger: AAAGAATTTCCGGGTGACTGCGTACAAGGCGGTCCAGGAGAAAAGTTCATCGCCGCCCCCAAGGAAGACCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080919.12 ENSMUST00000106142.8 |
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| CDS CCA 72 bp | GACCGCCTTGTACGCAGTCACCCGGAAATTCTTTTCTaGCACAAAGCCCCTGTGCCCACTTTCACTCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: DRLVRSHPEILF*HKAPVPTFTPL Trigger: AAGAGGAGTGAAAGTGGGCACAGGGGCTTTGTGCCAGAAAAGAATTTCCGGGTGACTGCGTACAAGGCGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080919.12 ENSMUST00000106142.8 |
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| CDS CAA 90 bp | TGCGCTTCCTTGAACGAGAGACAGATCGGCTTCGGGACCGAGACTTaGAAAACGAACGAGACCGAGATCTGGATGCAGATCTTGAGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: CASLNERQIGFGTET*KTNETEIWMQILSE Trigger: CTCGCTCAAGATCTGCATCCAGATCTCGGTCTCGTTCGTTTTCAAAGTCTCGGTCCCGAAGCCGATCTGTCTCTCGTTCAAGGAAGCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080919.12 ENSMUST00000106142.8 ENSMUST00000123008.8 ENSMUST00000136157.8 ENSMUST00000169403.8 |
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| CDS CAA 72 bp | TTGAACGAGAGACAGATCGGCTTCGGGACCGAGACTTaGAAAACGAACGAGACCGAGATCTGGATGCAGATC | + |
|
Preference number: 6 (lower is better) Translates to: LNERQIGFGTET*KTNETEIWMQI Trigger: GATCTGCATCCAGATCTCGGTCTCGTTCGTTTTCAAAGTCTCGGTCCCGAAGCCGATCTGTCTCTCGTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000080919.12 ENSMUST00000106142.8 ENSMUST00000123008.8 ENSMUST00000136157.8 ENSMUST00000169403.8 |
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| CDS CAA 72 bp | ACTTATTTAGCTTCCATTTACTCAGCCTGCGCTTCCTaGAACGAGAGACAGATCGGCTTCGGGACCGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: TYLASIYSACAS*NERQIGFGTET Trigger: AGTCTCGGTCCCGAAGCCGATCTGTCTCTCGTTCAAGGAAGCGCAGGCTGAGTAAATGGAAGCTAAATAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123008.8 |
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| CDS CAA 90 bp | CATCAGAGAAGCCCCCTTTCTCCTTCAGCTTCTCCTTATCGGCATTaGTTTGTTTCTGCTCCTTATCCTTCCCATTCTCAGTCTTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: HQRSPLSPSASPYRH*FVSAPYPSHSQSSA Trigger: AGCAGAAGACTGAGAATGGGAAGGATAAGGAGCAGAAACAAACAAATGCCGATAAGGAGAAGCTGAAGGAGAAAGGGGGCTTCTCTGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080919.12 ENSMUST00000106142.8 |
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| CDS GCA 72 bp | TGTTTCTGCTCCTTATCCTTCCCATTCTCAGTCTTCTaGTCCTCCAGATACCTTTTTGAATATGCTGCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: CFCSLSFPFSVF*SSRYLFEYAAP Trigger: AGGGGCAGCATATTCAAAAAGGTATCTGGAGGAGCAGAAGACTGAGAATGGGAAGGATAAGGAGCAGAAACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080919.12 ENSMUST00000106142.8 |
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