Pregenerated sensors for THRA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058756Ensembl transcript IDs: ENSMUST00000064187.12, ENSMUST00000103139.11, ENSMUST00000124072.2
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGTGGCATGCTCAGGGTAGGAGGGTGGGCTCGAGGAGTGGGAGGTaGCCAGCCTGTGGCCATGCTCCCAGCGTGTGGGCGTGGCCCCGC | + |
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Preference number: 1 (lower is better) Translates to: EWHAQGRRVGSRSGR*PACGHAPSVWAWPR Trigger: GCGGGGCCACGCCCACACGCTGGGAGCATGGCCACAGGCTGGCCACCTCCCACTCCTCGAGCCCACCCTCCTACCCTGAGCATGCCACTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| 3UTR GCA 90 bp | CCAGGGGAGGAGCTAAGCCAAGCCAAGCCAAGCCAAGCTGTCCTTTaGACCCAGGACCCAGGTATTTGGGGAAGTAGAGACCTGTGGCCT | + |
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Preference number: 1 (lower is better) Translates to: PGEELSQAKPSQAVL*TQDPGIWGSRDLWP Trigger: AGGCCACAGGTCTCTACTTCCCCAAATACCTGGGTCCTGGGTGCAAAGGACAGCTTGGCTTGGCTTGGCTTGGCTTAGCTCCTCCCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| 3UTR CCA 90 bp | GCCAAGCCAAGCCAAGCTGTCCTTTGCACCCAGGACCCAGGTATTTaGGGAAGTAGAGACCTGTGGCCTGAAGGGAAATCTAGGCCAAGG | + |
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Preference number: 1 (lower is better) Translates to: AKPSQAVLCTQDPGI*GSRDLWPEGKSRPR Trigger: CCTTGGCCTAGATTTCCCTTCAGGCCACAGGTCTCTACTTCCCCAAATACCTGGGTCCTGGGTGCAAAGGACAGCTTGGCTTGGCTTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| 3UTR CCA 90 bp | GTCCTTTGCACCCAGGACCCAGGTATTTGGGGAAGTAGAGACCTGTaGCCTGAAGGGAAATCTAGGCCAAGGAACTTGGCAGGGCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: VLCTQDPGIWGSRDL*PEGKSRPRNLAGLS Trigger: AGAGAGCCCTGCCAAGTTCCTTGGCCTAGATTTCCCTTCAGGCCACAGGTCTCTACTTCCCCAAATACCTGGGTCCTGGGTGCAAAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| 3UTR CAA 90 bp | GGAAGTAGAGACCTGTGGCCTGAAGGGAAATCTAGGCCAAGGAACTaGGCAGGGCTCTCTGTGTGTATAGGGGTGAGTAAGGGCACCTGC | + |
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Preference number: 2 (lower is better) Translates to: GSRDLWPEGKSRPRN*AGLSVCIGVSKGTC Trigger: GCAGGTGCCCTTACTCACCCCTATACACACAGAGAGCCCTGCCAAGTTCCTTGGCCTAGATTTCCCTTCAGGCCACAGGTCTCTACTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| 3UTR-3UTR GCA 90 bp | GGAAGTAGAGACCTGTGGCCTGAAGGGAAATCTAGGCCAAGGAACTTGGCAGGGGTGAGTAAGGGCACCTaGCCCTACTCCTCATTCCTC | + |
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Preference number: 2 (lower is better) Translates to: GSRDLWPEGKSRPRNLAGVSKGT*PYSSFL Trigger: GAGGAATGAGGAGTAGGGGCAGGTGCCCTTACTCAC...CCCTGCCAAGTTCCTTGGCCTAGATTTCCCTTCAGGCCACAGGTCTCTACTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| 3UTR-3UTR GCA 90 bp | GGAAGTAGAGACCTGTGGCCTGAAGGGAAATCTAGGCCAAGGAACTTGGCAGGGGGGGTGTATGGGAGCTaGATCTATCCAAGGATGGGA | + |
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Preference number: 2 (lower is better) Translates to: GSRDLWPEGKSRPRNLAGGVYGS*IYPRMG Trigger: TCCCATCCTTGGATAGATGCAGCTCCCATACACCCC...CCCTGCCAAGTTCCTTGGCCTAGATTTCCCTTCAGGCCACAGGTCTCTACTTCC 54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| 3UTR-3UTR GCA 90 bp | ATAAAACAGCGAGAAGTGTCACACAAGAAGCATGAACCAAGTAAGCACAGACGAGCCAGCCTGTGGCCATaGTCCCAGCGTGTGGGCGTG | + |
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Preference number: 2 (lower is better) Translates to: IKQREVSHKKHEPSKHRRASLWP*SQRVGV Trigger: CACGCCCACACGCTGGGAGCATGGCCACAGGCTGGC...TCGTCTGTGCTTACTTGGTTCATGCTTCTTGTGTGACACTTCTCGCTGTTTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| 3UTR-3UTR CCA 90 bp | AGTCTAGCTTGGGAAACAGACTCATGCCCGACTAATTATAAAACAGCGAGAAGTTCGAGGAGTGGGAGGTaGCCAGCCTGTGGCCATGCT | + |
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Preference number: 2 (lower is better) Translates to: SLAWETDSCPTNYKTARSSRSGR*PACGHA Trigger: AGCATGGCCACAGGCTGGCCACCTCCCACTCCTCGA...ACTTCTCGCTGTTTTATAATTAGTCGGGCATGAGTCTGTTTCCCAAGCTAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| 3UTR-3UTR CCA 90 bp | ATTATAAAACAGCGAGAAGTGTCACACAAGAAGCATGAACCAAGTAAGCACAGAGGTGGGCTCGAGGAGTaGGAGGTGGCCAGCCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: IIKQREVSHKKHEPSKHRGGLEE*EVASLW Trigger: CCACAGGCTGGCCACCTCCCACTCCTCGAGCCCACC...TCTGTGCTTACTTGGTTCATGCTTCTTGTGTGACACTTCTCGCTGTTTTATAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| 3UTR-3UTR CCA 90 bp | CGACTAATTATAAAACAGCGAGAAGTGTCACACAAGAAGCATGAACCAAGTAAGCTCAGGGTAGGAGGGTaGGCTCGAGGAGTGGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: RLIIKQREVSHKKHEPSKLRVGG*ARGVGG Trigger: ACCTCCCACTCCTCGAGCCCACCCTCCTACCCTGAG...CTTACTTGGTTCATGCTTCTTGTGTGACACTTCTCGCTGTTTTATAATTAGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| 3UTR TCA 72 bp | TTTCTGCCCGGGAGAGCTGGGGAAGGAGGTGACACTTaGTGTGGGGCCTCAAAGGGACAAGATAACTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: FLPGRAGEGGDT*CGASKGQDNCQ Trigger: CTGGCAGTTATCTTGTCCCTTTGAGGCCCCACATCAAGTGTCACCTCCTTCCCCAGCTCTCCCGGGCAGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| 3UTR GCA 72 bp | GGGCTCTCTGTGTGTATAGGGGTGAGTAAGGGCACCTaGCCCTACTCCTCATTCCTCCTGACCCTACAGTCA | + |
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Preference number: 3 (lower is better) Translates to: GLSVCIGVSKGT*PYSSFLLTLQS Trigger: TGACTGTAGGGTCAGGAGGAATGAGGAGTAGGGGCAGGTGCCCTTACTCACCCCTATACACACAGAGAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| 3UTR GCA 72 bp | GAGCTAAGCCAAGCCAAGCCAAGCCAAGCTGTCCTTTaGACCCAGGACCCAGGTATTTGGGGAAGTAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: ELSQAKPSQAVL*TQDPGIWGSRD Trigger: GTCTCTACTTCCCCAAATACCTGGGTCCTGGGTGCAAAGGACAGCTTGGCTTGGCTTGGCTTGGCTTAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| 3UTR TCA 72 bp | ATGCCAGGCCCAGCACTGGGCACTGGGCTACAGACATaGTTCAGACACAGTCTAGCTTGGGAAACAGACTCA | + |
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Preference number: 3 (lower is better) Translates to: MPGPALGTGLQT*FRHSLAWETDS Trigger: TGAGTCTGTTTCCCAAGCTAGACTGTGTCTGAATCATGTCTGTAGCCCAGTGCCCAGTGCTGGGCCTGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| 3UTR CCA 72 bp | ACCCAGGACCCAGGTATTTGGGGAAGTAGAGACCTGTaGCCTGAAGGGAAATCTAGGCCAAGGAACTTGGCA | + |
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Preference number: 3 (lower is better) Translates to: TQDPGIWGSRDL*PEGKSRPRNLA Trigger: TGCCAAGTTCCTTGGCCTAGATTTCCCTTCAGGCCACAGGTCTCTACTTCCCCAAATACCTGGGTCCTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| 3UTR CCA 72 bp | AGCCAAGCTGTCCTTTGCACCCAGGACCCAGGTATTTaGGGAAGTAGAGACCTGTGGCCTGAAGGGAAATCT | + |
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Preference number: 3 (lower is better) Translates to: SQAVLCTQDPGI*GSRDLWPEGKS Trigger: AGATTTCCCTTCAGGCCACAGGTCTCTACTTCCCCAAATACCTGGGTCCTGGGTGCAAAGGACAGCTTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| 3UTR GCA 72 bp | AGAAGCATGAACCAAGTAAGCACAGACGACTATTTCTaGCCGGGAGAGCTGGGGAAGGAGGTGACACTTGAT | + |
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Preference number: 3 (lower is better) Translates to: RSMNQVSTDDYF*PGELGKEVTLD Trigger: ATCAAGTGTCACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTCTGTGCTTACTTGGTTCATGCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| 3UTR CCA 72 bp | CCCTACTCCTCATTCCTCCTGACCCTACAGTCAAGATaGCATGTCCCTCTCAATTCTTCCTACTTCCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: PYSSFLLTLQSR*HVPLNSSYFPS Trigger: GGAAGGGAAGTAGGAAGAATTGAGAGGGACATGCCATCTTGACTGTAGGGTCAGGAGGAATGAGGAGTAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| CDS-3UTR CCA 90 bp | GCTCGAGGAGTGGGAGGTGGCCAGCCTGTGGCCATGCTCCCAGCGTGTGGGCGTTGCTGTCCTTCCGGGTaGACGCCCAGTGACCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: ARGVGGGQPVAMLPACGRCCPSG*TPSDPP Trigger: GGGCGGGTCACTGGGCGTCCACCCGGAAGGACAGCA...ACGCCCACACGCTGGGAGCATGGCCACAGGCTGGCCACCTCCCACTCCTCGAGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| CDS-3UTR GCA 90 bp | GTGGGAGGTGGCCAGCCTGTGGCCATGCTCCCAGCGTGTGGGCGTGGCCCCGCTGTGGGCTCTGGTCGCTaGTGCAGTGAGCGAATCATC | + |
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Preference number: 4 (lower is better) Translates to: VGGGQPVAMLPACGRGPAVGSGR*CSERII Trigger: GATGATTCGCTCACTGCAGCAGCGACCAGAGCCCAC...AGCGGGGCCACGCCCACACGCTGGGAGCATGGCCACAGGCTGGCCACCTCCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| CDS-3UTR GCA 90 bp | AGCACAGACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGAGGTGACACTTGATGCCCGGCCGGCCTTCTaGCGCTGCCCCCTTGTACAG | + |
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Preference number: 4 (lower is better) Translates to: STDDYFCPGELGKEVTLDARPAF*RCPLVQ Trigger: CTGTACAAGGGGGCAGCGGCAGAAGGCCGGCCGGGC...ATCAAGTGTCACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTCTGTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| CDS-3UTR GCA 90 bp | CTGAGGGGGCTGGGCAGTGCAGGGGTGTATGGGAGCTGCATCTATCCAAGGATGGTGGGCTCTGGTCGCTaGTGCAGTGAGCGAATCATC | + |
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Preference number: 4 (lower is better) Translates to: LRGLGSAGVYGSCIYPRMVGSGR*CSERII Trigger: GATGATTCGCTCACTGCAGCAGCGACCAGAGCCCAC...CATCCTTGGATAGATGCAGCTCCCATACACCCCTGCACTGCCCAGCCCCCTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| CDS-3UTR GCA 90 bp | GGCATCCCAGGCAGAGGGAACTACAGAGCAAATAACAAGGGAGCTTGGCCACGATCCAGGAGACGCTGCTaGGGGCTCTTCGGGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: GIPGRGNYRANNKGAWPRSRRRC*GLFGLW Trigger: CCAGAGCCCGAAGAGCCCGCAGCAGCGTCTCCTGGA...TCGTGGCCAAGCTCCCTTGTTATTTGCTCTGTAGTTCCCTCTGCCTGGGATGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| CDS-3UTR GCA 90 bp | GAACCAAGTAAGCACAGACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGAGGTAGCTCCAGGAGACGCTaGTGCGGGCTCTTCGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: EPSKHRRLFLPGRAGEGGSSRRR*CGLFGL Trigger: GAGCCCGAAGAGCCCGCAGCAGCGTCTCCTGGAGCT...ACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTCTGTGCTTACTTGGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| CDS-3UTR GCA 90 bp | CCAAGTAAGCACAGACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGAGGTGACAGAGGCTGCCTTGCCTaGCTGGTCCTCGCAGACCTC | + |
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Preference number: 4 (lower is better) Translates to: PSKHRRLFLPGRAGEGGDRGCLA*LVLADL Trigger: GAGGTCTGCGAGGACCAGGCAGGCAAGGCAGCCTCT...GTCACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTCTGTGCTTACTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| CDS-3UTR CCA 90 bp | CTGAGGGGGCTGGGCAGTGCAGGGGTGTATGGGAGCTGCATCTATCCAAGGATGCGCCTCTGTTTCCAATaGCTGCCCTGGGCGTTAGTG | + |
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Preference number: 4 (lower is better) Translates to: LRGLGSAGVYGSCIYPRMRLCFQ*LPWALV Trigger: CACTAACGCCCAGGGCAGCCATTGGAAACAGAGGCG...CATCCTTGGATAGATGCAGCTCCCATACACCCCTGCACTGCCCAGCCCCCTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| CDS-3UTR TCA 90 bp | AGCACAGACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGAGGTGACACTTGATCGGCACAGCTGGCACTaGTTCCGGGTGATCTTGTCG | + |
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Preference number: 4 (lower is better) Translates to: STDDYFCPGELGKEVTLDRHSWH*FRVILS Trigger: CGACAAGATCACCCGGAATCAGTGCCAGCTGTGCCG...ATCAAGTGTCACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTCTGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| CDS-3UTR GCA 90 bp | AACTTGGCAGGGCTCTCTGTGTGTATAGGGGTGAGTAAGGGCACCTGCCCCTACGGCTCTGGTCGCTGCTaGAGTGAGCGAATCATCTCC | + |
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Preference number: 4 (lower is better) Translates to: NLAGLSVCIGVSKGTCPYGSGRC*SERIIS Trigger: GGAGATGATTCGCTCACTGCAGCAGCGACCAGAGCC...GTAGGGGCAGGTGCCCTTACTCACCCCTATACACACAGAGAGCCCTGCCAAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| CDS-3UTR GCA 90 bp | GAACCAAGTAAGCACAGACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGAGGTCCGGCCTTCTGCCGCTaGCCCCTTGTACAGAATCGA | + |
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Preference number: 4 (lower is better) Translates to: EPSKHRRLFLPGRAGEGGPAFCR*PLVQNR Trigger: TCGATTCTGTACAAGGGGGCAGCGGCAGAAGGCCGG...ACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTCTGTGCTTACTTGGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| CDS-3UTR TCA 90 bp | GAACCAAGTAAGCACAGACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGAGGTGTTCTCCTCTGGGTCTaGCCCACACTCCACCTTGCT | + |
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Preference number: 4 (lower is better) Translates to: EPSKHRRLFLPGRAGEGGVLLWV*PTLHLA Trigger: AGCAAGGTGGAGTGTGGGTCAGACCCAGAGGAGAAC...ACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTCTGTGCTTACTTGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| CDS-3UTR TCA 90 bp | AACTTGGCAGGGCTCTCTGTGTGTATAGGGGTGAGTAAGGGCACCTGCCCCTACTCGCTTTCCATCTGGTaGCCTGGCACTGTTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: NLAGLSVCIGVSKGTCPYSLSIW*PGTVLL Trigger: GAGGAGAACAGTGCCAGGTCACCAGATGGAAAGCGA...GTAGGGGCAGGTGCCCTTACTCACCCCTATACACACAGAGAGCCCTGCCAAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| CDS-3UTR TCA 90 bp | CCAAGTAAGCACAGACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGAGGTGACTGGTCGCTGCTGCAGTaGGCGAATCATCTCCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: PSKHRRLFLPGRAGEGGDWSLLQ*ANHLLL Trigger: AAGGAGGAGATGATTCGCTCACTGCAGCAGCGACCA...GTCACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTCTGTGCTTACTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| CDS-3UTR TCA 90 bp | CAAGTAAGCACAGACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGAGGTGACACGGACCTGCGGACCCTaGACAACATGCATTCCGAGA | + |
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Preference number: 4 (lower is better) Translates to: QVSTDDYFCPGELGKEVTRTCGP*TTCIPR Trigger: TCTCGGAATGCATGTTGTTCAGGGTCCGCAGGTCCG...TGTCACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTCTGTGCTTACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| CDS-3UTR GCA 90 bp | GACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGAGGTGACACTTGATGTGGGGCTCCTCTCCCGGTTCTaGTCAATCAGCTTGCGTTTG | + |
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Preference number: 4 (lower is better) Translates to: DDYFCPGELGKEVTLDVGLLSRF*SISLRL Trigger: CAAACGCAAGCTGATTGAGCAGAACCGGGAGAGGAG...CCCCACATCAAGTGTCACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| CDS-3UTR GCA 90 bp | AACTTGGCAGGGCTCTCTGTGTGTATAGGGGTGAGTAAGGGCACCTGCCCCTACATTAGCAGCACAGCCTaGAGCAGAGCCACTTCCGTG | + |
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Preference number: 4 (lower is better) Translates to: NLAGLSVCIGVSKGTCPYISSTA*SRATSV Trigger: CACGGAAGTGGCTCTGCTGCAGGCTGTGCTGCTAAT...GTAGGGGCAGGTGCCCTTACTCACCCCTATACACACAGAGAGCCCTGCCAAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| CDS-3UTR GCA 90 bp | CCAGGTATTTGGGGAAGTAGAGACCTGTGGCCTGAAGGGAAATCTAGGCCAAGGGGCAGGCCCCGATCATaGGGAGGTCAGTCACCTTCA | + |
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Preference number: 4 (lower is better) Translates to: PGIWGSRDLWPEGKSRPRGRPRS*GGQSPS Trigger: TGAAGGTGACTGACCTCCGCATGATCGGGGCCTGCC...CCTTGGCCTAGATTTCCCTTCAGGCCACAGGTCTCTACTTCCCCAAATACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| CDS-3UTR CCA 90 bp | GACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGAGGTGACACTTGATGTGGGGTTCCATCTGGTGACCTaGCACTGTTCTCCTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: DDYFCPGELGKEVTLDVGFHLVT*HCSPLG Trigger: ACCCAGAGGAGAACAGTGCCAGGTCACCAGATGGAA...CCCCACATCAAGTGTCACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| CDS-3UTR CCA 90 bp | CATGAACCAAGTAAGCACAGACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGACCCACTCTTCAGGAGTaGGCTCTGGTCGCTGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: HEPSKHRRLFLPGRAGEGPTLQE*ALVAAA Trigger: TGCAGCAGCGACCAGAGCCCACTCCTGAAGAGTGGG...TCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTCTGTGCTTACTTGGTTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| CDS-3UTR CCA 90 bp | GGCTGGGCAGTGCAGGGGTGTATGGGAGCTGCATCTATCCAAGGATGGGAGGAAGCGTTAGTGCTGCGATaGGCCTCTGTAGCAACATGT | + |
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Preference number: 4 (lower is better) Translates to: GWAVQGCMGAASIQGWEEALVLR*ASVATC Trigger: ACATGTTGCTACAGAGGCCCATCGCAGCACTAACGC...TTCCTCCCATCCTTGGATAGATGCAGCTCCCATACACCCCTGCACTGCCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| CDS-3UTR CCA 90 bp | GACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGAGGTGACACTTGATGTGGGGGAGACAATAGGTGACTaGCCAATGTCATCCGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: DDYFCPGELGKEVTLDVGETIGD*PMSSGR Trigger: CCTGCCGGATGACATTGGCCAGTCACCTATTGTCTC...CCCCACATCAAGTGTCACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| CDS-3UTR TCA 90 bp | CAAGTAAGCACAGACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGAGGTGACATCGCTTTCCATCTGGTaGCCTGGCACTGTTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: QVSTDDYFCPGELGKEVTSLSIW*PGTVLL Trigger: GAGGAGAACAGTGCCAGGTCACCAGATGGAAAGCGA...TGTCACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTCTGTGCTTACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| CDS-3UTR TCA 90 bp | GCCTCCCATACTGCCTTTCATAGCAAGTTCATTTATGGCCCTGTCCAAGGGCTGCGGCACAGCTGGCACTaGTTCCGGGTGATCTTGTCG | + |
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Preference number: 4 (lower is better) Translates to: ASHTAFHSKFIYGPVQGLRHSWH*FRVILS Trigger: CGACAAGATCACCCGGAATCAGTGCCAGCTGTGCCG...CAGCCCTTGGACAGGGCCATAAATGAACTTGCTATGAAAGGCAGTATGGGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| CDS-3UTR TCA 90 bp | AACTTGGCAGGGCTCTCTGTGTGTATAGGGGTGAGTAAGGGCACCTGCCCCTACCATGGAGACAATAGGTaGCTGGCCAATGTCATCCGG | + |
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Preference number: 4 (lower is better) Translates to: NLAGLSVCIGVSKGTCPYHGDNR*LANVIR Trigger: CCGGATGACATTGGCCAGTCACCTATTGTCTCCATG...GTAGGGGCAGGTGCCCTTACTCACCCCTATACACACAGAGAGCCCTGCCAAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| CDS-3UTR TCA 90 bp | GGCAGAGGGAACTACAGAGCAAATAACAAGGGAGCTTGGCCACGAGTGGCATGCAGCCCTTCAGGAGGATaGTCTGGTCTTCGCAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: GRGNYRANNKGAWPRVACSPSGG*SGLRKA Trigger: TGCCTTGCGAAGACCAGATCATCCTCCTGAAGGGCT...GCATGCCACTCGTGGCCAAGCTCCCTTGTTATTTGCTCTGTAGTTCCCTCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| CDS-3UTR GCA 90 bp | GGGGGCTGGGCAGTGCAGGGGTGTATGGGAGCTGCATCTATCCAAGGATGGGAGGGATATACCCTGACATaGTGCTTTTCAGGGGACATT | + |
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Preference number: 4 (lower is better) Translates to: GGWAVQGCMGAASIQGWEGYTLT*CFSGDI Trigger: AATGTCCCCTGAAAAGCAGCATGTCAGGGTATATCC...CTCCCATCCTTGGATAGATGCAGCTCCCATACACCCCTGCACTGCCCAGCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| CDS-3UTR CCA 90 bp | CCAAGTAAGCACAGACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGAGGTGACCCTTCATCAGCAGCTTaGGCCAGAAGTGCGGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: PSKHRRLFLPGRAGEGGDPSSAA*ARSAEC Trigger: ACATTCCGCACTTCTGGCCCAAGCTGCTGATGAAGG...GTCACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTCTGTGCTTACTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR TCA 90 bp | GCCTCCCATACTGCCTTTCATAGCAAGTTCATTTATGGCCCTGTCCAAGGGCTGGTTCTCCTCTGGGTCTaGCCCACACTCCACCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASHTAFHSKFIYGPVQGLVLLWV*PTLHLA Trigger: AGCAAGGTGGAGTGTGGGTCAGACCCAGAGGAGAAC...CAGCCCTTGGACAGGGCCATAAATGAACTTGCTATGAAAGGCAGTATGGGAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
||
| CDS-3UTR TCA 90 bp | CCAGGTATTTGGGGAAGTAGAGACCTGTGGCCTGAAGGGAAATCTAGGCCAAGGAGCCCTTCAGGAGGATaGTCTGGTCTTCGCAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGIWGSRDLWPEGKSRPRSPSGG*SGLRKA Trigger: TGCCTTGCGAAGACCAGATCATCCTCCTGAAGGGCT...CCTTGGCCTAGATTTCCCTTCAGGCCACAGGTCTCTACTTCCCCAAATACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
||
| CDS-3UTR TCA 90 bp | AGCCAAGCTGTCCTTTGCACCCAGGACCCAGGTATTTGGGGAAGTAGAGACCTGTGTGTTTGCGGTGGTTaGCGTAGTGCTCAAACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQAVLCTQDPGIWGSRDLCVCGG*RSAQTP Trigger: TGGCGTTTGAGCACTACGTCAACCACCGCAAACACA...CAGGTCTCTACTTCCCCAAATACCTGGGTCCTGGGTGCAAAGGACAGCTTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
||
| CDS-3UTR CCA 90 bp | GTATTTGGGGAAGTAGAGACCTGTGGCCTGAAGGGAAATCTAGGCCAAGGAACTCCCACTCTTCAGGAGTaGGCTCTGGTCGCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VFGEVETCGLKGNLGQGTPTLQE*ALVAAA Trigger: TGCAGCAGCGACCAGAGCCCACTCCTGAAGAGTGGG...AGTTCCTTGGCCTAGATTTCCCTTCAGGCCACAGGTCTCTACTTCCCCAAATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
||
| CDS-3UTR CCA 90 bp | GGCATCCCAGGCAGAGGGAACTACAGAGCAAATAACAAGGGAGCTTGGCCACGAGCGTTAGTGCTGCGATaGGCCTCTGTAGCAACATGT | + |
|
Preference number: 4 (lower is better) Translates to: GIPGRGNYRANNKGAWPRALVLR*ASVATC Trigger: ACATGTTGCTACAGAGGCCCATCGCAGCACTAACGC...TCGTGGCCAAGCTCCCTTGTTATTTGCTCTGTAGTTCCCTCTGCCTGGGATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR CCA 90 bp | GGCAGAGGGAACTACAGAGCAAATAACAAGGGAGCTTGGCCACGAGTGGCATGCTGCCCAGTTCAAAGATaGCGTCAGAGACCACACCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRGNYRANNKGAWPRVACCPVQR*RQRPHP Trigger: TGGGTGTGGTCTCTGACGCCATCTTTGAACTGGGCA...GCATGCCACTCGTGGCCAAGCTCCCTTGTTATTTGCTCTGTAGTTCCCTCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR CCA 90 bp | GAAGTAGAGACCTGTGGCCTGAAGGGAAATCTAGGCCAAGGAACTTGGCAGGGCTGCCCAGTTCAAAGATaGCGTCAGAGACCACACCCA | + |
|
Preference number: 4 (lower is better) Translates to: EVETCGLKGNLGQGTWQGCPVQR*RQRPHP Trigger: TGGGTGTGGTCTCTGACGCCATCTTTGAACTGGGCA...GCCCTGCCAAGTTCCTTGGCCTAGATTTCCCTTCAGGCCACAGGTCTCTACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
||
| CDS-3UTR CCA 90 bp | GAAGTAGAGACCTGTGGCCTGAAGGGAAATCTAGGCCAAGGAACTTGGCAGGGCCCTTCATCAGCAGCTTaGGCCAGAAGTGCGGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: EVETCGLKGNLGQGTWQGPSSAA*ARSAEC Trigger: ACATTCCGCACTTCTGGCCCAAGCTGCTGATGAAGG...GCCCTGCCAAGTTCCTTGGCCTAGATTTCCCTTCAGGCCACAGGTCTCTACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
||
| CDS-3UTR GCA 90 bp | CCAAGTAAGCACAGACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGAGGTGACTATACCCTGACATGCTaGTTTTCAGGGGACATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSKHRRLFLPGRAGEGGDYTLTC*FSGDIG Trigger: GCCAATGTCCCCTGAAAAGCAGCATGTCAGGGTATA...GTCACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTCTGTGCTTACTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR GCA 90 bp | AGCACAGACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGAGGTGACACTTGATAGGCAGAGAGTGACTTaGCCAGTTCAAAGATGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: STDDYFCPGELGKEVTLDRQRVT*PVQRWR Trigger: ACGCCATCTTTGAACTGGGCAAGTCACTCTCTGCCT...ATCAAGTGTCACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTCTGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR CCA 90 bp | CCAGGTATTTGGGGAAGTAGAGACCTGTGGCCTGAAGGGAAATCTAGGCCAAGGTTCCATCTGGTGACCTaGCACTGTTCTCCTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGIWGSRDLWPEGKSRPRFHLVT*HCSPLG Trigger: ACCCAGAGGAGAACAGTGCCAGGTCACCAGATGGAA...CCTTGGCCTAGATTTCCCTTCAGGCCACAGGTCTCTACTTCCCCAAATACCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
||
| CDS-3UTR CCA 90 bp | AACTTGGCAGGGCTCTCTGTGTGTATAGGGGTGAGTAAGGGCACCTGCCCCTACGGATGGAGATTCTTCTaGATTGTGCGGCGAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NLAGLSVCIGVSKGTCPYGWRFF*IVRRKK Trigger: CTTCTTTCGCCGCACAATCCAGAAGAATCTCCATCC...GTAGGGGCAGGTGCCCTTACTCACCCCTATACACACAGAGAGCCCTGCCAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| CDS-3UTR CCA 90 bp | GAAGTAGAGACCTGTGGCCTGAAGGGAAATCTAGGCCAAGGAACTTGGCAGGGCCAATCAGCTTGCGTTTaGCCACCCGCTTCGAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: EVETCGLKGNLGQGTWQGQSACV*PPASNH Trigger: ATGATTCGAAGCGGGTGGCCAAACGCAAGCTGATTG...GCCCTGCCAAGTTCCTTGGCCTAGATTTCCCTTCAGGCCACAGGTCTCTACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
||
| CDS-3UTR CCA 90 bp | GTATTTGGGGAAGTAGAGACCTGTGGCCTGAAGGGAAATCTAGGCCAAGGAACTTTCCAATGGCTGCCCTaGGCGTTAGTGCTGCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: VFGEVETCGLKGNLGQGTFQWLP*ALVLRW Trigger: CCATCGCAGCACTAACGCCCAGGGCAGCCATTGGAA...AGTTCCTTGGCCTAGATTTCCCTTCAGGCCACAGGTCTCTACTTCCCCAAATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
||
| CDS-3UTR TCA 90 bp | ATTTGGGGAAGTAGAGACCTGTGGCCTGAAGGGAAATCTAGGCCAAGGAACTTGTGGTCGCTGCTGCAGTaGGCGAATCATCTCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IWGSRDLWPEGKSRPRNLWSLLQ*ANHLLL Trigger: AAGGAGGAGATGATTCGCTCACTGCAGCAGCGACCA...CAAGTTCCTTGGCCTAGATTTCCCTTCAGGCCACAGGTCTCTACTTCCCCAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
||
| CDS-3UTR GCA 90 bp | AGCCAAGCTGTCCTTTGCACCCAGGACCCAGGTATTTGGGGAAGTAGAGACCTGTATACCCTGACATGCTaGTTTTCAGGGGACATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQAVLCTQDPGIWGSRDLYTLTC*FSGDIG Trigger: GCCAATGTCCCCTGAAAAGCAGCATGTCAGGGTATA...CAGGTCTCTACTTCCCCAAATACCTGGGTCCTGGGTGCAAAGGACAGCTTGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
||
| CDS-3UTR GCA 90 bp | AGCACAGACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGAGGTGACACTTGATAGCAGCTGTCATACTTaGAGGAATAGGTGGGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: STDDYFCPGELGKEVTLDSSCHT*RNRWDG Trigger: TCCATCCCACCTATTCCTGCAAGTATGACAGCTGCT...ATCAAGTGTCACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTCTGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR GCA 90 bp | GTATTTGGGGAAGTAGAGACCTGTGGCCTGAAGGGAAATCTAGGCCAAGGAACTTCTGCTCAATCAGCTTaGGTTTGGCCACCCGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: VFGEVETCGLKGNLGQGTSAQSA*VWPPAS Trigger: CGAAGCGGGTGGCCAAACGCAAGCTGATTGAGCAGA...AGTTCCTTGGCCTAGATTTCCCTTCAGGCCACAGGTCTCTACTTCCCCAAATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
||
| CDS-3UTR GCA 90 bp | CCAGGTATTTGGGGAAGTAGAGACCTGTGGCCTGAAGGGAAATCTAGGCCAAGGAGGCAGAGAGTGACTTaGCCAGTTCAAAGATGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PGIWGSRDLWPEGKSRPRRQRVT*PVQRWR Trigger: ACGCCATCTTTGAACTGGGCAAGTCACTCTCTGCCT...CCTTGGCCTAGATTTCCCTTCAGGCCACAGGTCTCTACTTCCCCAAATACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
||
| CDS-3UTR TCA 90 bp | GAACCAAGTAAGCACAGACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGAGGTGTTAAAGGCAGAGAGTaGCTTGCCCAGTTCAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: EPSKHRRLFLPGRAGEGGVKGRE*LAQFKD Trigger: ATCTTTGAACTGGGCAAGTCACTCTCTGCCTTTAAC...ACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTCTGTGCTTACTTGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR TCA 90 bp | AGTCTAGCTTGGGAAACAGACTCATGCCCGACTAATTATAAAACAGCGAGAAGTTTCGGGCTCTGGTGCTaGAGAACCGGCCCTCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLAWETDSCPTNYKTARSFGLWC*RTGPRR Trigger: TCTCCGAGGGCCGGTTCTTCAGCACCAGAGCCCGAA...ACTTCTCGCTGTTTTATAATTAGTCGGGCATGAGTCTGTTTCCCAAGCTAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR GCA 90 bp | GTATTTGGGGAAGTAGAGACCTGTGGCCTGAAGGGAAATCTAGGCCAAGGAACTCTCCTCTCCCGGTTCTaGTCAATCAGCTTGCGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VFGEVETCGLKGNLGQGTLLSRF*SISLRL Trigger: CAAACGCAAGCTGATTGAGCAGAACCGGGAGAGGAG...AGTTCCTTGGCCTAGATTTCCCTTCAGGCCACAGGTCTCTACTTCCCCAAATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| CDS-3UTR GCA 90 bp | AAGTGTCACACAAGAAGCATGAACCAAGTAAGCACAGACGACTATTTCTGCCCGGGCTCTGGTCGCTGCTaGAGTGAGCGAATCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KCHTRSMNQVSTDDYFCPGSGRC*SERIIS Trigger: GGAGATGATTCGCTCACTGCAGCAGCGACCAGAGCC...CGGGCAGAAATAGTCGTCTGTGCTTACTTGGTTCATGCTTCTTGTGTGACACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| CDS-3UTR GCA 90 bp | AAGTGTCACACAAGAAGCATGAACCAAGTAAGCACAGACGACTATTTCTGCCCGTGCATTCCGAGAAGCTaGTGTCCTTCCGGGTGGACG | + |
|
Preference number: 4 (lower is better) Translates to: KCHTRSMNQVSTDDYFCPCIPRS*CPSGWT Trigger: CGTCCACCCGGAAGGACAGCAGCTTCTCGGAATGCA...CGGGCAGAAATAGTCGTCTGTGCTTACTTGGTTCATGCTTCTTGTGTGACACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| CDS-3UTR GCA 90 bp | AGTCTAGCTTGGGAAACAGACTCATGCCCGACTAATTATAAAACAGCGAGAAGTCCCGCTTCACCAAGCTaGTGCTCAAGCTGCCGGACC | + |
|
Preference number: 4 (lower is better) Translates to: SLAWETDSCPTNYKTARSPASPS*CSSCRT Trigger: GGTCCGGCAGCTTGAGCAGCAGCTTGGTGAAGCGGG...ACTTCTCGCTGTTTTATAATTAGTCGGGCATGAGTCTGTTTCCCAAGCTAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| CDS-3UTR CCA 90 bp | ATTTGGGGAAGTAGAGACCTGTGGCCTGAAGGGAAATCTAGGCCAAGGAACTTGGAGACAATAGGTGACTaGCCAATGTCATCCGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IWGSRDLWPEGKSRPRNLETIGD*PMSSGR Trigger: CCTGCCGGATGACATTGGCCAGTCACCTATTGTCTC...CAAGTTCCTTGGCCTAGATTTCCCTTCAGGCCACAGGTCTCTACTTCCCCAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| CDS-3UTR GCA 90 bp | ATAAAACAGCGAGAAGTGTCACACAAGAAGCATGAACCAAGTAAGCACAGACGAGGGAGCTCGCCTCACTaGTGTCGTCTTCCCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: IKQREVSHKKHEPSKHRRGSSPH*CRLPHR Trigger: TCTGTGGGGAAGACGACAGCAGTGAGGCGAGCTCCC...TCGTCTGTGCTTACTTGGTTCATGCTTCTTGTGTGACACTTCTCGCTGTTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
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| CDS-3UTR CCA 90 bp | AAGTGTCACACAAGAAGCATGAACCAAGTAAGCACAGACGACTATTTCTGCCCGCTAGAACCAAGTCCATaGCCATGCCCACAGCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: KCHTRSMNQVSTDDYFCPLEPSP*PCPQQC Trigger: GCATTGCTGTGGGCATGGCCATGGACTTGGTTCTAG...CGGGCAGAAATAGTCGTCTGTGCTTACTTGGTTCATGCTTCTTGTGTGACACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR CCA 90 bp | ATAAAACAGCGAGAAGTGTCACACAAGAAGCATGAACCAAGTAAGCACAGACGACGCCTCTGTTTCCAATaGCTGCCCTGGGCGTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IKQREVSHKKHEPSKHRRRLCFQ*LPWALV Trigger: CACTAACGCCCAGGGCAGCCATTGGAAACAGAGGCG...TCGTCTGTGCTTACTTGGTTCATGCTTCTTGTGTGACACTTCTCGCTGTTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR TCA 90 bp | ATTTGGGGAAGTAGAGACCTGTGGCCTGAAGGGAAATCTAGGCCAAGGAACTTGGTTAAAGGCAGAGAGTaGCTTGCCCAGTTCAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IWGSRDLWPEGKSRPRNLVKGRE*LAQFKD Trigger: ATCTTTGAACTGGGCAAGTCACTCTCTGCCTTTAAC...CAAGTTCCTTGGCCTAGATTTCCCTTCAGGCCACAGGTCTCTACTTCCCCAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| CDS-3UTR GCA 90 bp | ACAGACTCATGCCCGACTAATTATAAAACAGCGAGAAGTGTCACACAAGAAGCATCTGCTCAATCAGCTTaGGTTTGGCCACCCGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: TDSCPTNYKTARSVTQEASAQSA*VWPPAS Trigger: CGAAGCGGGTGGCCAAACGCAAGCTGATTGAGCAGA...TGCTTCTTGTGTGACACTTCTCGCTGTTTTATAATTAGTCGGGCATGAGTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR GCA 90 bp | ACAGACTCATGCCCGACTAATTATAAAACAGCGAGAAGTGTCACACAAGAAGCAATTAGCAGCACAGCCTaGAGCAGAGCCACTTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TDSCPTNYKTARSVTQEAISSTA*SRATSV Trigger: CACGGAAGTGGCTCTGCTGCAGGCTGTGCTGCTAAT...TGCTTCTTGTGTGACACTTCTCGCTGTTTTATAATTAGTCGGGCATGAGTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR TCA 90 bp | ACAGACTCATGCCCGACTAATTATAAAACAGCGAGAAGTGTCACACAAGAAGCATGTGTTTGCGGTGGTTaGCGTAGTGCTCAAACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TDSCPTNYKTARSVTQEACVCGG*RSAQTP Trigger: TGGCGTTTGAGCACTACGTCAACCACCGCAAACACA...TGCTTCTTGTGTGACACTTCTCGCTGTTTTATAATTAGTCGGGCATGAGTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR CCA 90 bp | CGACTAATTATAAAACAGCGAGAAGTGTCACACAAGAAGCATGAACCAAGTAAGTTCCAATGGCTGCCCTaGGCGTTAGTGCTGCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: RLIIKQREVSHKKHEPSKFQWLP*ALVLRW Trigger: CCATCGCAGCACTAACGCCCAGGGCAGCCATTGGAA...CTTACTTGGTTCATGCTTCTTGTGTGACACTTCTCGCTGTTTTATAATTAGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR CCA 90 bp | CGACTAATTATAAAACAGCGAGAAGTGTCACACAAGAAGCATGAACCAAGTAAGAGAATTCCGCTTCGGTaGAGCAGCTCCAGGAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: RLIIKQREVSHKKHEPSKRIPLR*SSSRRR Trigger: GCGTCTCCTGGAGCTGCTCCACCGAAGCGGAATTCT...CTTACTTGGTTCATGCTTCTTGTGTGACACTTCTCGCTGTTTTATAATTAGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR CCA 90 bp | CGACTAATTATAAAACAGCGAGAAGTGTCACACAAGAAGCATGAACCAAGTAAGCAGACCGCTCGGGAATaGAGAATTCCGCTTCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLIIKQREVSHKKHEPSKQTARE*RIPLRW Trigger: CCACCGAAGCGGAATTCTCCATTCCCGAGCGGTCTG...CTTACTTGGTTCATGCTTCTTGTGTGACACTTCTCGCTGTTTTATAATTAGTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR TCA 90 bp | AGTCTAGCTTGGGAAACAGACTCATGCCCGACTAATTATAAAACAGCGAGAAGTACTAGGGATATACCCTaGCATGCTGCTTTTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLAWETDSCPTNYKTARSTRDIP*HAAFQG Trigger: CCCCTGAAAAGCAGCATGTCAGGGTATATCCCTAGT...ACTTCTCGCTGTTTTATAATTAGTCGGGCATGAGTCTGTTTCCCAAGCTAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR TCA 90 bp | ATTATAAAACAGCGAGAAGTGTCACACAAGAAGCATGAACCAAGTAAGCACAGACATGGAGACAATAGGTaGCTGGCCAATGTCATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: IIKQREVSHKKHEPSKHRHGDNR*LANVIR Trigger: CCGGATGACATTGGCCAGTCACCTATTGTCTCCATG...TCTGTGCTTACTTGGTTCATGCTTCTTGTGTGACACTTCTCGCTGTTTTATAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR CCA 90 bp | AGTCTAGCTTGGGAAACAGACTCATGCCCGACTAATTATAAAACAGCGAGAAGTGGATGGAGATTCTTCTaGATTGTGCGGCGAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLAWETDSCPTNYKTARSGWRFF*IVRRKK Trigger: CTTCTTTCGCCGCACAATCCAGAAGAATCTCCATCC...ACTTCTCGCTGTTTTATAATTAGTCGGGCATGAGTCTGTTTCCCAAGCTAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR CCA 90 bp | CGACTAATTATAAAACAGCGAGAAGTGTCACACAAGAAGCATGAACCAAGTAAGCAATCAGCTTGCGTTTaGCCACCCGCTTCGAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLIIKQREVSHKKHEPSKQSACV*PPASNH Trigger: ATGATTCGAAGCGGGTGGCCAAACGCAAGCTGATTG...CTTACTTGGTTCATGCTTCTTGTGTGACACTTCTCGCTGTTTTATAATTAGTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR GCA 90 bp | ATAAAACAGCGAGAAGTGTCACACAAGAAGCATGAACCAAGTAAGCACAGACGATACAGAATCGAACTCTaGACTTCTCTCTCCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: IKQREVSHKKHEPSKHRRYRIEL*TSLSFI Trigger: GATGAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTA...TCGTCTGTGCTTACTTGGTTCATGCTTCTTGTGTGACACTTCTCGCTGTTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR GCA 90 bp | ATTATAAAACAGCGAGAAGTGTCACACAAGAAGCATGAACCAAGTAAGCACAGAGGATATACCCTGACATaGTGCTTTTCAGGGGACATT | + |
|
Preference number: 4 (lower is better) Translates to: IIKQREVSHKKHEPSKHRGYTLT*CFSGDI Trigger: AATGTCCCCTGAAAAGCAGCATGTCAGGGTATATCC...TCTGTGCTTACTTGGTTCATGCTTCTTGTGTGACACTTCTCGCTGTTTTATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS TCA 90 bp | AGCAGCTCCAGGAGACGCTGCTGCGGGCTCTTCGGGCTCTGGTGCTaGAGAACCGGCCCTCGGAGACTTCCCGCTTCACCAAGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSRRRCCGLFGLWC*RTGPRRLPASPSCC Trigger: GCAGCAGCTTGGTGAAGCGGGAAGTCTCCGAGGGCCGGTTCTTCAGCACCAGAGCCCGAAGAGCCCGCAGCAGCGTCTCCTGGAGCTGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064187.12 ENSMUST00000124072.2 |
||
| CDS CCA 90 bp | TCGTCTTCCCCACAGACCGCTCGGGAATGGAGAATTCCGCTTCGGTaGAGCAGCTCCAGGAGACGCTGCTGCGGGCTCTTCGGGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSPQTAREWRIPLR*SSSRRRCCGLFGLW Trigger: CCAGAGCCCGAAGAGCCCGCAGCAGCGTCTCCTGGAGCTGCTCCACCGAAGCGGAATTCTCCATTCCCGAGCGGTCTGTGGGGAAGACGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR CAA 90 bp | CCAGGGAGAAGGAGTAGCGCCCTCCTTCTCCTTTCCCGTTGCCCTCCGAGGGGCGGCCGGAGCGGTCTGTaGACATTAGCAGCACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PGRRSSALLLLSRCPPRGGRSGL*TLAAQP Trigger: AGGCTGTGCTGCTAATGTCAACAGACCGCTCCGGCC...GCCCCTCGGAGGGCAACGGGAAAGGAGAAGGAGGGCGCTACTCCTTCTCCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS CCA 90 bp | GAGCTCGCCTCACTGCTGTCGTCTTCCCCACAGACCGCTCGGGAATaGAGAATTCCGCTTCGGTGGAGCAGCTCCAGGAGACGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ELASLLSSSPQTARE*RIPLRWSSSRRRCC Trigger: GCAGCAGCGTCTCCTGGAGCTGCTCCACCGAAGCGGAATTCTCCATTCCCGAGCGGTCTGTGGGGAAGACGACAGCAGTGAGGCGAGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR CAA 90 bp | GCTCGAGGAGTGGGAGGTGGCCAGCCTGTGGCCATGCTCCCAGCGTGTGGGCGTAAGGCAGAGAGTGACTaGCCCAGTTCAAAGATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ARGVGGGQPVAMLPACGRKAESD*PSSKMA Trigger: CGCCATCTTTGAACTGGGCAAGTCACTCTCTGCCTT...ACGCCCACACGCTGGGAGCATGGCCACAGGCTGGCCACCTCCCACTCCTCGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR CAA 90 bp | GGGGGCTGGGCAGTGCAGGGGTGTATGGGAGCTGCATCTATCCAAGGATGGGAGGCCTCTAGGTCTACCTaGTCTCCGTCCGGCATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GGWAVQGCMGAASIQGWEASRST*SPSGME Trigger: CTCCATGCCGGACGGAGACAAGGTAGACCTAGAGGC...CTCCCATCCTTGGATAGATGCAGCTCCCATACACCCCTGCACTGCCCAGCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
||
| CDS-3UTR CAA 90 bp | CCAGGGAGAAGGAGTAGCGCCCTCCTTCTCCTTTCCCGTTGCCCTCCGAGGGGCCCCAAGCCACCATTCTaGAGCTGTTCCCGCTTAACC | + |
|
Preference number: 5 (lower is better) Translates to: PGRRSSALLLLSRCPPRGPKPPF*SCSRLT Trigger: GGTTAAGCGGGAACAGCTCAAGAATGGTGGCTTGGG...GCCCCTCGGAGGGCAACGGGAAAGGAGAAGGAGGGCGCTACTCCTTCTCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR CAA 90 bp | AGCACAGACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGAGGTGACACTTGATCAGGGAGAGGCTGCCTaGCCTGCCTGGTCCTCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: STDDYFCPGELGKEVTLDQGEAA*PAWSSQ Trigger: CTGCGAGGACCAGGCAGGCAAGGCAGCCTCTCCCTG...ATCAAGTGTCACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTCTGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS TCA 90 bp | TATCAGGTCCCACTCTTCAGGAGTGGGCTCTGGTCGCTGCTGCAGTaGGCGAATCATCTCCTCCTTTCGCCTCCTCTCCCGGTTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: YQVPLFRSGLWSLLQ*ANHLLLSPPLPVLL Trigger: GAGCAGAACCGGGAGAGGAGGCGAAAGGAGGAGATGATTCGCTCACTGCAGCAGCGACCAGAGCCCACTCCTGAAGAGTGGGACCTGATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064187.12 ENSMUST00000103139.11 ENSMUST00000124072.2 |
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| CDS GCA 90 bp | GCAACATGTATCAGGTCCCACTCTTCAGGAGTGGGCTCTGGTCGCTaGTGCAGTGAGCGAATCATCTCCTCCTTTCGCCTCCTCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ATCIRSHSSGVGSGR*CSERIISSFRLLSR Trigger: CCGGGAGAGGAGGCGAAAGGAGGAGATGATTCGCTCACTGCAGCAGCGACCAGAGCCCACTCCTGAAGAGTGGGACCTGATACATGTTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064187.12 ENSMUST00000103139.11 ENSMUST00000124072.2 |
||
| CDS-3UTR CAA 90 bp | CTGAGGGGGCTGGGCAGTGCAGGGGTGTATGGGAGCTGCATCTATCCAAGGATGACAGCAATGCACTTCTaGAAGCGGCACAGCTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LRGLGSAGVYGSCIYPRMTAMHF*KRHSWH Trigger: GTGCCAGCTGTGCCGCTTCAAGAAGTGCATTGCTGT...CATCCTTGGATAGATGCAGCTCCCATACACCCCTGCACTGCCCAGCCCCCTCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
||
| CDS-3UTR CAA 90 bp | GACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGAGGTGACACTTGATGTGGGGTCTGCCGCTGCCCCCTaGTACAGAATCGAACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DDYFCPGELGKEVTLDVGSAAAP*YRIELC Trigger: GCAGAGTTCGATTCTGTACAAGGGGGCAGCGGCAGA...CCCCACATCAAGTGTCACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS GCA 90 bp | ACATGTATCAGGTCCCACTCTTCAGGAGTGGGCTCTGGTCGCTGCTaGAGTGAGCGAATCATCTCCTCCTTTCGCCTCCTCTCCCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TCIRSHSSGVGSGRC*SERIISSFRLLSRF Trigger: GAACCGGGAGAGGAGGCGAAAGGAGGAGATGATTCGCTCACTGCAGCAGCGACCAGAGCCCACTCCTGAAGAGTGGGACCTGATACATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064187.12 ENSMUST00000103139.11 ENSMUST00000124072.2 |
||
| CDS-3UTR CAA 90 bp | GACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGAGGTGACACTTGATGTGGGGACAGCAATGCACTTCTaGAAGCGGCACAGCTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: DDYFCPGELGKEVTLDVGTAMHF*KRHSWH Trigger: GTGCCAGCTGTGCCGCTTCAAGAAGTGCATTGCTGT...CCCCACATCAAGTGTCACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR CAA 90 bp | AGCACAGACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGAGGTGACACTTGATGCCTCTAGGTCTACCTaGTCTCCGTCCGGCATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: STDDYFCPGELGKEVTLDASRST*SPSGME Trigger: CTCCATGCCGGACGGAGACAAGGTAGACCTAGAGGC...ATCAAGTGTCACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTCTGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR CAA 90 bp | CTGAGGGGGCTGGGCAGTGCAGGGGTGTATGGGAGCTGCATCTATCCAAGGATGAACATGGGCAGTTTTTaGGCAAAGTCCACCACGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LRGLGSAGVYGSCIYPRMNMGSF*AKSTTR Trigger: GCGCGTGGTGGACTTTGCCAAAAAACTGCCCATGTT...CATCCTTGGATAGATGCAGCTCCCATACACCCCTGCACTGCCCAGCCCCCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
||
| CDS CCA 90 bp | GACTGGCCAATGTCATCCGGCAGGAATTTTCGCCTCTGTTTCCAATaGCTGCCCTGGGCGTTAGTGCTGCGATGGGCCTCTGTAGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: DWPMSSGRNFRLCFQ*LPWALVLRWASVAT Trigger: TGTTGCTACAGAGGCCCATCGCAGCACTAACGCCCAGGGCAGCCATTGGAAACAGAGGCGAAAATTCCTGCCGGATGACATTGGCCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064187.12 ENSMUST00000103139.11 ENSMUST00000124072.2 |
||
| CDS-3UTR CAA 90 bp | AGCACAGACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGAGGTGACACTTGATGCCGGGGTGATGATCTaGGTAAACTCGCTGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: STDDYFCPGELGKEVTLDAGVMI*VNSLKA Trigger: GGCCTTCAGCGAGTTTACCAAGATCATCACCCCGGC...ATCAAGTGTCACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTCTGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS TCA 90 bp | TCAGCAGCTTGGGCCAGAAGTGCGGAATGTTGTGTTTGCGGTGGTTaGCGTAGTGCTCAAACGCCAGCAGGTAGGCCTCCTGACTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SAAWARSAECCVCGG*RSAQTPAGRPPDSS Trigger: AGAAGAGTCAGGAGGCCTACCTGCTGGCGTTTGAGCACTACGTCAACCACCGCAAACACAACATTCCGCACTTCTGGCCCAAGCTGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064187.12 ENSMUST00000103139.11 ENSMUST00000124072.2 |
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| CDS CCA 90 bp | TTTCGCCTCTGTTTCCAATGGCTGCCCTGGGCGTTAGTGCTGCGATaGGCCTCTGTAGCAACATGTATCAGGTCCCACTCTTCAGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FRLCFQWLPWALVLR*ASVATCIRSHSSGV Trigger: CACTCCTGAAGAGTGGGACCTGATACATGTTGCTACAGAGGCCCATCGCAGCACTAACGCCCAGGGCAGCCATTGGAAACAGAGGCGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064187.12 ENSMUST00000103139.11 ENSMUST00000124072.2 |
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| CDS-3UTR CAA 90 bp | CAAGTAAGCACAGACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGAGGTGACATTCTGCTCAATCAGCTaGCGTTTGGCCACCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QVSTDDYFCPGELGKEVTFCSIS*RLATRF Trigger: GAAGCGGGTGGCCAAACGCAAGCTGATTGAGCAGAA...TGTCACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTCTGTGCTTACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR CAA 90 bp | AGCCAAGCTGTCCTTTGCACCCAGGACCCAGGTATTTGGGGAAGTAGAGACCTGCCCAAGCCACCATTCTaGAGCTGTTCCCGCTTAACC | + |
|
Preference number: 5 (lower is better) Translates to: SQAVLCTQDPGIWGSRDLPKPPF*SCSRLT Trigger: GGTTAAGCGGGAACAGCTCAAGAATGGTGGCTTGGG...CAGGTCTCTACTTCCCCAAATACCTGGGTCCTGGGTGCAAAGGACAGCTTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
||
| CDS-3UTR CAA 90 bp | GCCTCCCATACTGCCTTTCATAGCAAGTTCATTTATGGCCCTGTCCAAGGGCTGGGCCGGAGCGGTCTGTaGACATTAGCAGCACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ASHTAFHSKFIYGPVQGLGRSGL*TLAAQP Trigger: AGGCTGTGCTGCTAATGTCAACAGACCGCTCCGGCC...CAGCCCTTGGACAGGGCCATAAATGAACTTGCTATGAAAGGCAGTATGGGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
||
| CDS-3UTR CAA 90 bp | CCAAGGAACTTGGCAGGGCTCTCTGTGTGTATAGGGGTGAGTAAGGGCACCTGCCAGAAGTGCGGAATGTaGTGTTTGCGGTGGTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: PRNLAGLSVCIGVSKGTCQKCGM*CLRWLT Trigger: CGTCAACCACCGCAAACACAACATTCCGCACTTCTG...GCAGGTGCCCTTACTCACCCCTATACACACAGAGAGCCCTGCCAAGTTCCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
||
| CDS-3UTR CAA 90 bp | GAAGTAGAGACCTGTGGCCTGAAGGGAAATCTAGGCCAAGGAACTTGGCAGGGCACCTTCATCAGCAGCTaGGGCCAGAAGTGCGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: EVETCGLKGNLGQGTWQGTFISS*GQKCGM Trigger: CATTCCGCACTTCTGGCCCAAGCTGCTGATGAAGGT...GCCCTGCCAAGTTCCTTGGCCTAGATTTCCCTTCAGGCCACAGGTCTCTACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
||
| CDS CCA 90 bp | ATGTCATCCGGCAGGAATTTTCGCCTCTGTTTCCAATGGCTGCCCTaGGCGTTAGTGCTGCGATGGGCCTCTGTAGCAACATGTATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MSSGRNFRLCFQWLP*ALVLRWASVATCIR Trigger: CCTGATACATGTTGCTACAGAGGCCCATCGCAGCACTAACGCCCAGGGCAGCCATTGGAAACAGAGGCGAAAATTCCTGCCGGATGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064187.12 ENSMUST00000103139.11 ENSMUST00000124072.2 |
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| CDS-3UTR CAA 90 bp | GAAGTAGAGACCTGTGGCCTGAAGGGAAATCTAGGCCAAGGAACTTGGCAGGGCTCAATCAGCTTGCGTTaGGCCACCCGCTTCGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: EVETCGLKGNLGQGTWQGSISLR*ATRFES Trigger: TGATTCGAAGCGGGTGGCCAAACGCAAGCTGATTGA...GCCCTGCCAAGTTCCTTGGCCTAGATTTCCCTTCAGGCCACAGGTCTCTACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
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| CDS-3UTR CAA 90 bp | CAAGTAAGCACAGACGACTATTTCTGCCCGGGAGAGCTGGGGAAGGAGGTGACACAGAAGTGCGGAATGTaGTGTTTGCGGTGGTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: QVSTDDYFCPGELGKEVTQKCGM*CLRWLT Trigger: CGTCAACCACCGCAAACACAACATTCCGCACTTCTG...TGTCACCTCCTTCCCCAGCTCTCCCGGGCAGAAATAGTCGTCTGTGCTTACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR CAA 90 bp | GTATTTGGGGAAGTAGAGACCTGTGGCCTGAAGGGAAATCTAGGCCAAGGAACTGCCGGGGTGATGATCTaGGTAAACTCGCTGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VFGEVETCGLKGNLGQGTAGVMI*VNSLKA Trigger: GGCCTTCAGCGAGTTTACCAAGATCATCACCCCGGC...AGTTCCTTGGCCTAGATTTCCCTTCAGGCCACAGGTCTCTACTTCCCCAAATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
||
| CDS-3UTR CAA 90 bp | AGTCTAGCTTGGGAAACAGACTCATGCCCGACTAATTATAAAACAGCGAGAAGTTCCTTCATCAGCAGCTaGGGCCAGAAGTGCGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: SLAWETDSCPTNYKTARSSFISS*GQKCGM Trigger: CATTCCGCACTTCTGGCCCAAGCTGCTGATGAAGGA...ACTTCTCGCTGTTTTATAATTAGTCGGGCATGAGTCTGTTTCCCAAGCTAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR CAA 90 bp | ACAGACTCATGCCCGACTAATTATAAAACAGCGAGAAGTGTCACACAAGAAGCAAACATGGGCAGTTTTTaGGCAAAGTCCACCACGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TDSCPTNYKTARSVTQEANMGSF*AKSTTR Trigger: GCGCGTGGTGGACTTTGCCAAAAAACTGCCCATGTT...TGCTTCTTGTGTGACACTTCTCGCTGTTTTATAATTAGTCGGGCATGAGTCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR CAA 90 bp | AAACAGACTCATGCCCGACTAATTATAAAACAGCGAGAAGTGTCACACAAGAAGTCAATCAGCTTGCGTTaGGCCACCCGCTTCGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: KQTHARLIIKQREVSHKKSISLR*ATRFES Trigger: TGATTCGAAGCGGGTGGCCAAACGCAAGCTGATTGA...CTTCTTGTGTGACACTTCTCGCTGTTTTATAATTAGTCGGGCATGAGTCTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS-3UTR CAA 90 bp | TTCTTCATTTATATTCTCCCCTTGCTTGGTTTCCAAAGTGCAGTTAGGATGACTAAGGCAGAGAGTGACTaGCCCAGTTCAAAGATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: FFIYILPLLGFQSAVRMTKAESD*PSSKMA Trigger: CGCCATCTTTGAACTGGGCAAGTCACTCTCTGCCTT...AGTCATCCTAACTGCACTTTGGAAACCAAGCAAGGGGAGAATATAAATGAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103139.11 |
||
| CDS CCA 72 bp | ACAACATGCATTCCGAGAAGCTGCTGTCCTTCCGGGTaGACGCCCAGTGACCCGCCCGGCCGGCCTTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TTCIPRSCCPSG*TPSDPPGRPSA Trigger: GGCAGAAGGCCGGCCGGGCGGGTCACTGGGCGTCCACCCGGAAGGACAGCAGCTTCTCGGAATGCATGTTGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS TCA 72 bp | AGGAGACGCTGCTGCGGGCTCTTCGGGCTCTGGTGCTaGAGAACCGGCCCTCGGAGACTTCCCGCTTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: RRRCCGLFGLWC*RTGPRRLPASP Trigger: TGGTGAAGCGGGAAGTCTCCGAGGGCCGGTTCTTCAGCACCAGAGCCCGAAGAGCCCGCAGCAGCGTCTCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064187.12 ENSMUST00000124072.2 |
||
| CDS GCA 72 bp | AGAACCGGCCCTCGGAGACTTCCCGCTTCACCAAGCTaGTGCTCAAGCTGCCGGACCTGCGGACCCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: RTGPRRLPASPS*CSSCRTCGPFI Trigger: GATGAAGGGTCCGCAGGTCCGGCAGCTTGAGCAGCAGCTTGGTGAAGCGGGAAGTCTCCGAGGGCCGGTTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124072.2 |
||
| CDS CCA 72 bp | CCACAGACCGCTCGGGAATGGAGAATTCCGCTTCGGTaGAGCAGCTCCAGGAGACGCTGCTGCGGGCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PQTAREWRIPLR*SSSRRRCCGLF Trigger: GAAGAGCCCGCAGCAGCGTCTCCTGGAGCTGCTCCACCGAAGCGGAATTCTCCATTCCCGAGCGGTCTGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS CAA 90 bp | TGGACGCCCAGTGACCCGCCCGGCCGGCCTTCTGCCGCTGCCCCCTaGTACAGAATCGAACTCTGCACTTCTCTCTCCTTCATCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: WTPSDPPGRPSAAAP*YRIELCTSLSFISS Trigger: GCTGCTGATGAAGGAGAGAGAAGTGCAGAGTTCGATTCTGTACAAGGGGGCAGCGGCAGAAGGCCGGCCGGGCGGGTCACTGGGCGTCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS GCA 72 bp | AGGTCCCACTCTTCAGGAGTGGGCTCTGGTCGCTGCTaGAGTGAGCGAATCATCTCCTCCTTTCGCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RSHSSGVGSGRC*SERIISSFRLL Trigger: GAGGAGGCGAAAGGAGGAGATGATTCGCTCACTGCAGCAGCGACCAGAGCCCACTCCTGAAGAGTGGGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064187.12 ENSMUST00000103139.11 ENSMUST00000124072.2 |
||
| CDS CCA 72 bp | TCACTGCTGTCGTCTTCCCCACAGACCGCTCGGGAATaGAGAATTCCGCTTCGGTGGAGCAGCTCCAGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SLLSSSPQTARE*RIPLRWSSSRR Trigger: TCTCCTGGAGCTGCTCCACCGAAGCGGAATTCTCCATTCCCGAGCGGTCTGTGGGGAAGACGACAGCAGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064187.12 |
||
| CDS CCA 72 bp | CAAGCTGCCGGACCTGCGGACCCTTCATCAGCAGCTTaGGCCAGAAGTGCGGAATGTTGTGTTTGCGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: QAAGPADPSSAA*ARSAECCVCGG Trigger: ACCACCGCAAACACAACATTCCGCACTTCTGGCCCAAGCTGCTGATGAAGGGTCCGCAGGTCCGGCAGCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124072.2 |
||
| CDS CAA 72 bp | TCTTCGCAAGGCAGCTCGGAGAACATGGGCAGTTTTTaGGCAAAGTCCACCACGCGCGTGATGGCCGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSQGSSENMGSF*AKSTTRVMAGV Trigger: CACCCCGGCCATCACGCGCGTGGTGGACTTTGCCAAAAAACTGCCCATGTTCTCCGAGCTGCCTTGCGAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064187.12 ENSMUST00000103139.11 ENSMUST00000124072.2 |
||
| CDS GCA 72 bp | ATCAGGTCCCACTCTTCAGGAGTGGGCTCTGGTCGCTaGTGCAGTGAGCGAATCATCTCCTCCTTTCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: IRSHSSGVGSGR*CSERIISSFRL Trigger: GAGGCGAAAGGAGGAGATGATTCGCTCACTGCAGCAGCGACCAGAGCCCACTCCTGAAGAGTGGGACCTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064187.12 ENSMUST00000103139.11 ENSMUST00000124072.2 |
||
| CDS TCA 72 bp | TGGGCCAGAAGTGCGGAATGTTGTGTTTGCGGTGGTTaGCGTAGTGCTCAAACGCCAGCAGGTAGGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: WARSAECCVCGG*RSAQTPAGRPP Trigger: AGGAGGCCTACCTGCTGGCGTTTGAGCACTACGTCAACCACCGCAAACACAACATTCCGCACTTCTGGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064187.12 ENSMUST00000103139.11 ENSMUST00000124072.2 |
||
| CDS CCA 72 bp | GGCAGGAATTTTCGCCTCTGTTTCCAATGGCTGCCCTaGGCGTTAGTGCTGCGATGGGCCTCTGTAGCAACA | + |
|
Preference number: 6 (lower is better) Translates to: GRNFRLCFQWLP*ALVLRWASVAT Trigger: TGTTGCTACAGAGGCCCATCGCAGCACTAACGCCCAGGGCAGCCATTGGAAACAGAGGCGAAAATTCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064187.12 ENSMUST00000103139.11 ENSMUST00000124072.2 |
||
| CDS CCA 72 bp | ATGTCATCCGGCAGGAATTTTCGCCTCTGTTTCCAATaGCTGCCCTGGGCGTTAGTGCTGCGATGGGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: MSSGRNFRLCFQ*LPWALVLRWAS Trigger: AGAGGCCCATCGCAGCACTAACGCCCAGGGCAGCCATTGGAAACAGAGGCGAAAATTCCTGCCGGATGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064187.12 ENSMUST00000103139.11 ENSMUST00000124072.2 |
||
| CDS CAA 72 bp | AAGTCCACCACGCGCGTGATGGCCGGGGTGATGATCTaGGTAAACTCGCTGAAGGCCTCTAGGTCTACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: KSTTRVMAGVMI*VNSLKASRSTL Trigger: CAAGGTAGACCTAGAGGCCTTCAGCGAGTTTACCAAGATCATCACCCCGGCCATCACGCGCGTGGTGGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064187.12 ENSMUST00000103139.11 ENSMUST00000124072.2 |
||
| CDS CCA 72 bp | TGTTTCCAATGGCTGCCCTGGGCGTTAGTGCTGCGATaGGCCTCTGTAGCAACATGTATCAGGTCCCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: CFQWLPWALVLR*ASVATCIRSHS Trigger: AGAGTGGGACCTGATACATGTTGCTACAGAGGCCCATCGCAGCACTAACGCCCAGGGCAGCCATTGGAAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064187.12 ENSMUST00000103139.11 ENSMUST00000124072.2 |
||
| CDS TCA 72 bp | GTCTACCTTGTCTCCGTCCGGCATGGAGACAATAGGTaGCTGGCCAATGTCATCCGGCAGGAATTTTCGCCT | + |
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Preference number: 6 (lower is better) Translates to: VYLVSVRHGDNR*LANVIRQEFSP Trigger: AGGCGAAAATTCCTGCCGGATGACATTGGCCAGTCACCTATTGTCTCCATGCCGGACGGAGACAAGGTAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064187.12 ENSMUST00000103139.11 ENSMUST00000124072.2 |
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| CDS CCA 72 bp | ACCTTGTCTCCGTCCGGCATGGAGACAATAGGTGACTaGCCAATGTCATCCGGCAGGAATTTTCGCCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: TLSPSGMETIGD*PMSSGRNFRLC Trigger: ACAGAGGCGAAAATTCCTGCCGGATGACATTGGCCAGTCACCTATTGTCTCCATGCCGGACGGAGACAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064187.12 ENSMUST00000103139.11 ENSMUST00000124072.2 |
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| CDS CAA 90 bp | GGGGTGATGATCTTGGTAAACTCGCTGAAGGCCTCTAGGTCTACCTaGTCTCCGTCCGGCATGGAGACAATAGGTGACTGGCCAATGTCA | + |
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Preference number: 6 (lower is better) Translates to: GVMILVNSLKASRST*SPSGMETIGDWPMS Trigger: TGACATTGGCCAGTCACCTATTGTCTCCATGCCGGACGGAGACAAGGTAGACCTAGAGGCCTTCAGCGAGTTTACCAAGATCATCACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064187.12 ENSMUST00000103139.11 ENSMUST00000124072.2 |
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| CDS CAA 72 bp | ATCTTGGTAAACTCGCTGAAGGCCTCTAGGTCTACCTaGTCTCCGTCCGGCATGGAGACAATAGGTGACTGG | + |
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Preference number: 6 (lower is better) Translates to: ILVNSLKASRST*SPSGMETIGDW Trigger: CCAGTCACCTATTGTCTCCATGCCGGACGGAGACAAGGTAGACCTAGAGGCCTTCAGCGAGTTTACCAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064187.12 ENSMUST00000103139.11 ENSMUST00000124072.2 |
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