Pregenerated sensors for THPO (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022847Ensembl transcript IDs: ENSMUST00000076422.13, ENSMUST00000115437.4, ENSMUST00000231826.2, ENSMUST00000232217.2
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAAGCAGAACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTTCCTaGGGAAGCTTGTCCCCGAGAGAAGCTGCAGACGCTCACTGGGCC | + |
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Preference number: 1 (lower is better) Translates to: ESRTSGADAAASQPS*GSLSPREAADAHWA Trigger: GGCCCAGTGAGCGTCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTTCTGCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| 3UTR TCA 90 bp | TTACAATCTCCAGTGCTGTGTATCCCTTCCCCAGGGCCTTTTAGGTaGAAGCAGAACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: LQSPVLCIPSPGPFR*KQNIWSRCSCLSAF Trigger: GAAGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTTCTGCTTTCACCTAAAAGGCCCTGGGGAAGGGATACACAGCACTGGAGATTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| 3UTR GCA 90 bp | GGCTTCCTGTTAGCTTTCTTGGGAGGCAGGGTCCAGGAGCTCTGTTaGCCCAGTGAAGAACATTGGTCCCTGATTTTTATTGGCTTTTGG | + |
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Preference number: 1 (lower is better) Translates to: GFLLAFLGGRVQELC*PSEEHWSLIFIGFW Trigger: CCAAAAGCCAATAAAAATCAGGGACCAATGTTCTTCACTGGGGCAACAGAGCTCCTGGACCCTGCCTCCCAAGAAAGCTAACAGGAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
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| 3UTR GCA 90 bp | ATTTGTGGAAATTATAAAGAGCCTTCAAGCGCTCTGTGCTTGTCCTaGTGTGTGAGCCGAGGAGCCTGCCTCTTGCCACTTCCTGCACTT | + |
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Preference number: 1 (lower is better) Translates to: ICGNYKEPSSALCLS*CVSRGACLLPLPAL Trigger: AAGTGCAGGAAGTGGCAAGAGGCAGGCTCCTCGGCTCACACAGCAGGACAAGCACAGAGCGCTTGAAGGCTCTTTATAATTTCCACAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
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| 3UTR GCA 90 bp | TTTAGGTGCATTTGTGGAAATTATAAAGAGCCTTCAAGCGCTCTGTaGTTGTCCTGCTGTGTGAGCCGAGGAGCCTGCCTCTTGCCACTT | + |
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Preference number: 1 (lower is better) Translates to: FRCICGNYKEPSSAL*LSCCVSRGACLLPL Trigger: AAGTGGCAAGAGGCAGGCTCCTCGGCTCACACAGCAGGACAAGCACAGAGCGCTTGAAGGCTCTTTATAATTTCCACAAATGCACCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
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| 3UTR CCA 90 bp | AAGTCCTATAAGTCTGCCTTCATTTGGGAGGGTTCCAATAAAGTTTaGAGTGGCCACACAGGGCTGCTTTTTAGGTGCATTTGTGGAAAT | + |
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Preference number: 1 (lower is better) Translates to: KSYKSAFIWEGSNKV*SGHTGLLFRCICGN Trigger: ATTTCCACAAATGCACCTAAAAAGCAGCCCTGTGTGGCCACTCCAAACTTTATTGGAACCCTCCCAAATGAAGGCAGACTTATAGGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
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| 3UTR CAA 90 bp | ACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTTCCTGGGGAAGCTaGTCCCCGAGAGAAGCTGCAGACGCTCACTGGGCCAGTGCCCGC | + |
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Preference number: 2 (lower is better) Translates to: TSGADAAASQPSWGS*SPREAADAHWASAR Trigger: GCGGGCACTGGCCCAGTGAGCGTCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCATCTGCTCCAGATGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTGCTGTGTGAGCCGAGGAGCCTGCCTCTTGCCACTTCCTGCACTTCCGCCTTGGCTGAGCCCCTGCTaGGCTGCTGATGCTCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: SCCVSRGACLLPLPALPPWLSPC*AADALC Trigger: GCAAAGAGCATCAGCAGCTCAGCAGGGGCTCAGCCA...AGGCGGAAGTGCAGGAAGTGGCAAGAGGCAGGCTCCTCGGCTCACACAGCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
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| 3UTR-3UTR GCA 90 bp | TCCTGCTGTGTGAGCCGAGGAGCCTGCCTCTTGCCACTTCCTGCACTTCCGCCTAACATCTGGAGCAGATaGAGCTGCCTCTCAGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: SCCVSRGACLLPLPALPPNIWSR*SCLSAF Trigger: GAAGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTT...AGGCGGAAGTGCAGGAAGTGGCAAGAGGCAGGCTCCTCGGCTCACACAGCAGGA 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
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| 3UTR-3UTR CCA 90 bp | TATAAAGAGCCTTCAAGCGCTCTGTGCTTGTCCTGCTGTGTGAGCCGAGGAGCCGCCTCTCAGCCTTCCTaGGGAAGCTTGTCCCCGAGA | + |
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Preference number: 2 (lower is better) Translates to: YKEPSSALCLSCCVSRGAASQPS*GSLSPR Trigger: TCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGC...GGCTCCTCGGCTCACACAGCAGGACAAGCACAGAGCGCTTGAAGGCTCTTTATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
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| 3UTR-3UTR GCA 90 bp | AATCTCCAGTGCTGTGTATCCCTTCCCCAGGGCCTTTTAGGTGAAAGCAGAACAGTCCCCGAGAGAAGCTaGAGACGCTCACTGGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: NLQCCVSLPQGLLGESRTVPERS*RRSLGQ Trigger: CTGGCCCAGTGAGCGTCTGCAGCTTCTCTCGGGGAC...TGTTCTGCTTTCACCTAAAAGGCCCTGGGGAAGGGATACACAGCACTGGAGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| 3UTR-3UTR GCA 90 bp | AATCTCCAGTGCTGTGTATCCCTTCCCCAGGGCCTTTTAGGTGAAAGCAGAACATGGAGCAGATGCAGCTaGCTCTCAGCCTTCCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: NLQCCVSLPQGLLGESRTWSRCS*LSAFLG Trigger: CCCCAGGAAGGCTGAGAGGCAGCTGCATCTGCTCCA...TGTTCTGCTTTCACCTAAAAGGCCCTGGGGAAGGGATACACAGCACTGGAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| 3UTR CAA 90 bp | AGGTGCATTTGTGGAAATTATAAAGAGCCTTCAAGCGCTCTGTGCTaGTCCTGCTGTGTGAGCCGAGGAGCCTGCCTCTTGCCACTTCCT | + |
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Preference number: 2 (lower is better) Translates to: RCICGNYKEPSSALC*SCCVSRGACLLPLP Trigger: AGGAAGTGGCAAGAGGCAGGCTCCTCGGCTCACACAGCAGGACAAGCACAGAGCGCTTGAAGGCTCTTTATAATTTCCACAAATGCACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
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| 3UTR-3UTR CCA 90 bp | TATAAAGAGCCTTCAAGCGCTCTGTGCTTGTCCTGCTGTGTGAGCCGAGGAGCCGTCCCTGATTTTTATTaGCTTTTGGGTGCTCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: YKEPSSALCLSCCVSRGAVPDFY*LLGAPS Trigger: ACTGGGAGCACCCAAAAGCCAATAAAAATCAGGGAC...GGCTCCTCGGCTCACACAGCAGGACAAGCACAGAGCGCTTGAAGGCTCTTTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
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| 3UTR-3UTR TCA 90 bp | TATAAAGAGCCTTCAAGCGCTCTGTGCTTGTCCTGCTGTGTGAGCCGAGGAGCCAAGAACATTGGTCCCTaGTTTTTATTGGCTTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: YKEPSSALCLSCCVSRGAKNIGP*FLLAFG Trigger: CCCAAAAGCCAATAAAAATCAGGGACCAATGTTCTT...GGCTCCTCGGCTCACACAGCAGGACAAGCACAGAGCGCTTGAAGGCTCTTTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
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| 3UTR-3UTR CCA 90 bp | CTGCACAGCCTTACCTGGGGTGTGGAGCTCCCAGGCTTCCTGTTAGCTTTCTTGTTTTGTTTTCTGATATaGTGTAGCATCTACCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: LHSLTWGVELPGFLLAFLFCFLI*CSIYLG Trigger: ACCCAGGTAGATGCTACACCATATCAGAAAACAAAA...CAAGAAAGCTAACAGGAAGCCTGGGAGCTCCACACCCCAGGTAAGGCTGTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
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| 3UTR CCA 72 bp | ACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTTCCTaGGGAAGCTTGTCCCCGAGAGAAGCTGCAGACGCT | + |
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Preference number: 3 (lower is better) Translates to: TSGADAAASQPS*GSLSPREAADA Trigger: AGCGTCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCATCTGCTCCAGATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| 3UTR-3UTR CAA 90 bp | ACTGAGAATTACAGTGAAGGGAAGGAGGGCATTGTGGGGGTGTTGGAGGCGCGGCCTTCCTGGGGAAGCTaGTCCCCGAGAGAAGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: TENYSEGKEGIVGVLEARPSWGS*SPREAA Trigger: TGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGG...CCGCGCCTCCAACACCCCCACAATGCCCTCCTTCCCTTCACTGTAATTCTCAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
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| 3UTR TCA 72 bp | CCAGTGCTGTGTATCCCTTCCCCAGGGCCTTTTAGGTaGAAGCAGAACATCTGGAGCAGATGCAGCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: PVLCIPSPGPFR*KQNIWSRCSCL Trigger: GAGGCAGCTGCATCTGCTCCAGATGTTCTGCTTTCACCTAAAAGGCCCTGGGGAAGGGATACACAGCACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| 3UTR-3UTR CAA 90 bp | TACAATCTCCAGTGCTGTGTATCCCTTCCCCAGGGCCTTTTAGGTGAAAGCAGACCTTCCTGGGGAAGCTaGTCCCCGAGAGAAGCTGCA | + |
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Preference number: 3 (lower is better) Translates to: YNLQCCVSLPQGLLGESRPSWGS*SPREAA Trigger: TGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGG...TCTGCTTTCACCTAAAAGGCCCTGGGGAAGGGATACACAGCACTGGAGATTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| 3UTR-3UTR CAA 90 bp | TCTTGGGAGGCAGGGTCCAGGAGCTCTGTTGCCCCAGTGAAGAACATTGGTCCCCGGGAAGGCTTAAACTaGAAGCAAAGGAAAGTTCCC | + |
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Preference number: 3 (lower is better) Translates to: SWEAGSRSSVAPVKNIGPREGLN*KQRKVP Trigger: GGGAACTTTCCTTTGCTTCAAGTTTAAGCCTTCCCG...GGGACCAATGTTCTTCACTGGGGCAACAGAGCTCCTGGACCCTGCCTCCCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
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| 3UTR GCA 72 bp | ATTTGTGGAAATTATAAAGAGCCTTCAAGCGCTCTGTaGTTGTCCTGCTGTGTGAGCCGAGGAGCCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: ICGNYKEPSSAL*LSCCVSRGACL Trigger: GAGGCAGGCTCCTCGGCTCACACAGCAGGACAAGCACAGAGCGCTTGAAGGCTCTTTATAATTTCCACAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
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| 3UTR CCA 72 bp | AGTGAAGAACATTGGTCCCTGATTTTTATTGGCTTTTaGGTGCTCCCAGTTATTCTCTTACAGGTTCAGTTT | + |
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Preference number: 3 (lower is better) Translates to: SEEHWSLIFIGF*VLPVILLQVQF Trigger: AAACTGAACCTGTAAGAGAATAACTGGGAGCACCCAAAAGCCAATAAAAATCAGGGACCAATGTTCTTCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
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| 3UTR CAA 72 bp | GCAGATGCAGCTGCCTCTCAGCCTTCCTGGGGAAGCTaGTCCCCGAGAGAAGCTGCAGACGCTCACTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: ADAAASQPSWGS*SPREAADAHWA Trigger: GGCCCAGTGAGCGTCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCATCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS-3UTR TCA 90 bp | TGCCTCTCAGCCTTCCTGGGGAAGCTTGTCCCCGAGAGAAGCTGCAGACGCTCATTGGCAGGGTCCGTCTaGCACAGAGGGTGGGACCTT | + |
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Preference number: 4 (lower is better) Translates to: CLSAFLGKLVPERSCRRSLAGSV*HRGWDL Trigger: AAGGTCCCACCCTCTGTGTCAGACGGACCCTGCCAA...TGAGCGTCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS-3UTR TCA 90 bp | CAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGTCCCCGAGAGAAGCTGCAGACGGTCCACCCTGGAGGTTaGATGCCAGGGAGCCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: QLPLSLPGEACPREKLQTVHPGG*MPGSLC Trigger: ACAAAGGCTCCCTGGCATTCAACCTCCAGGGTGGAC...CGTCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS-3UTR CCA 90 bp | AGCAGAACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGGGGGTGGAGCTGGGGTaGAGATCCATGGGTGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: SRTSGADAAASQPSWGSLGVELG*RSMGGG Trigger: CCCACCACCCATGGATCTCCACCCCAGCTCCACCCC...CAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTTCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS-3UTR TCA 90 bp | TGCAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGTCCCCGAGAGAAGCTGCAGAGTCCACCCTGGAGGTTaGATGCCAGGGAGCCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: CSCLSAFLGKLVPERSCRVHPGG*MPGSLC Trigger: ACAAAGGCTCCCTGGCATTCAACCTCCAGGGTGGAC...TCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS-3UTR CCA 90 bp | TCTTGGGAGGCAGGGTCCAGGAGCTCTGTTGCCCCAGTGAAGAACATTGGTCCCCCCTGTAGAGGAAGCTaGGTTCCTAGGAGGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SWEAGSRSSVAPVKNIGPPCRGS*VPRRPC Trigger: GCAGGGCCTCCTAGGAACCCAGCTTCCTCTACAGGG...GGGACCAATGTTCTTCACTGGGGCAACAGAGCTCCTGGACCCTGCCTCCCAAGA 60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
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| CDS-3UTR CCA 90 bp | CAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGTCCCCGAGAGAAGCTGCAGACGGGTCCTTGTGAGCTGTaGTCCTGCCCTGTAGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: QLPLSLPGEACPREKLQTGPCEL*SCPVEE Trigger: TTCCTCTACAGGGCAGGACCACAGCTCACAAGGACC...CGTCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS-3UTR TCA 90 bp | AGCAGAACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGTTGGCAGGGTCCGTCTaGCACAGAGGGTGGGACCTT | + |
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Preference number: 4 (lower is better) Translates to: SRTSGADAAASQPSWGSLLAGSV*HRGWDL Trigger: AAGGTCCCACCCTCTGTGTCAGACGGACCCTGCCAA...CAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTTCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS-3UTR TCA 90 bp | TGCAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGTCCCCGAGAGAAGCTGCAGAGAGGCTTCCAGGGTCTaGAGTGAGGTTCCAGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: CSCLSAFLGKLVPERSCREASRV*SEVPAK Trigger: CTTTGCTGGAACCTCACTTCAGACCCTGGAAGCCTC...TCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS-3UTR GCA 90 bp | TCTTGGGAGGCAGGGTCCAGGAGCTCTGTTGCCCCAGTGAAGAACATTGGTCCCAAGAGGAGGCGAACCTaGCCAGAAAGCTGTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SWEAGSRSSVAPVKNIGPKRRRT*PESCPR Trigger: CCTGGGACAGCTTTCTGGGCAGGTTCGCCTCCTCTT...GGGACCAATGTTCTTCACTGGGGCAACAGAGCTCCTGGACCCTGCCTCCCAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
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| CDS-3UTR CCA 90 bp | CAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGTCCCCGAGAGAAGCTGCAGACGTCAAGAAGAGGGCATTaGGGTCCTTGTGAGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: QLPLSLPGEACPREKLQTSRRGH*GPCELW Trigger: CCACAGCTCACAAGGACCCCAATGCCCTCTTCTTGA...CGTCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS-3UTR CCA 90 bp | GGCCTTTTAGGTGAAAGCAGAACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTGGGGTGGAGCTGGGGTaGAGATCCATGGGTGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: GLLGESRTSGADAAASQPGVELG*RSMGGG Trigger: CCCACCACCCATGGATCTCCACCCCAGCTCCACCCC...AGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTTCTGCTTTCACCTAAAAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS-3UTR CCA 90 bp | CTGCACAGCCTTACCTGGGGTGTGGAGCTCCCAGGCTTCCTGTTAGCTTTCTTGAACAGGGGGTGGAGCTaGGGTGGAGATCCATGGGTG | + |
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Preference number: 4 (lower is better) Translates to: LHSLTWGVELPGFLLAFLNRGWS*GGDPWV Trigger: CACCCATGGATCTCCACCCCAGCTCCACCCCCTGTT...CAAGAAAGCTAACAGGAAGCCTGGGAGCTCCACACCCCAGGTAAGGCTGTGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
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| CDS-3UTR TCA 90 bp | CAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGTCCCCGAGAGAAGCTGCAGACGTTGACTCTGAATCCCTaGAGCCTGCTCAGAAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: QLPLSLPGEACPREKLQTLTLNP*SLLRSP Trigger: TGGACTTCTGAGCAGGCTTCAGGGATTCAGAGTCAA...CGTCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS-3UTR TCA 90 bp | CAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGTCCCCGAGAGAAGCTGCAGACGCTTATTCTCAGGTGGTaGCTCAGGGATCCCCATTTG | + |
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Preference number: 4 (lower is better) Translates to: QLPLSLPGEACPREKLQTLILRW*LRDPHL Trigger: CAAATGGGGATCCCTGAGTCACCACCTGAGAATAAG...CGTCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000232217.2 |
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| CDS-3UTR GCA 90 bp | TGCAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGTCCCCGAGAGAAGCTGCAGACCCCGAAGCAGTTGTTaGAAGCTCAAGAAGAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: CSCLSAFLGKLVPERSCRPRSSC*KLKKRA Trigger: TGCCCTCTTCTTGAGCTTGCAACAACTGCTTCGGGG...TCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS-3UTR CCA 90 bp | TGCAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGTCCCCGAGAGAAGCTGCAGATCAAGAAGAGGGCATTaGGGTCCTTGTGAGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: CSCLSAFLGKLVPERSCRSRRGH*GPCELW Trigger: CCACAGCTCACAAGGACCCCAATGCCCTCTTCTTGA...TCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS-3UTR CCA 90 bp | TGCAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGTCCCCGAGAGAAGCTGCAGAATCAGGAGCAAGGCTTaGAGAAGGAGGAAGTCCACC | + |
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Preference number: 4 (lower is better) Translates to: CSCLSAFLGKLVPERSCRIRSKA*RRRKST Trigger: GGTGGACTTCCTCCTTCTCCAAGCCTTGCTCCTGAT...TCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS-3UTR GCA 90 bp | TGCAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGTCCCCGAGAGAAGCTGCAGAACCCTGGAGGTTGAATaGCAGGGAGCCTTTGTTGAA | + |
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Preference number: 4 (lower is better) Translates to: CSCLSAFLGKLVPERSCRTLEVE*QGAFVE Trigger: TTCAACAAAGGCTCCCTGGCATTCAACCTCCAGGGT...TCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS-3UTR CCA 90 bp | AGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGTCCCCGAGAGAAGCTGCAGACGCGTTTATTTAGGAGTCTaGGGTCACAGGCAGGAGCTA | + |
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Preference number: 4 (lower is better) Translates to: SCLSAFLGKLVPERSCRRVYLGV*GHRQEL Trigger: TAGCTCCTGCCTGTGACCCCAGACTCCTAAATAAAC...GCGTCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS-3UTR CCA 90 bp | GGCCTTTTAGGTGAAAGCAGAACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTCCCTGTAGAGGAAGCTaGGTTCCTAGGAGGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLLGESRTSGADAAASQPPCRGS*VPRRPC Trigger: GCAGGGCCTCCTAGGAACCCAGCTTCCTCTACAGGG...AGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTTCTGCTTTCACCTAAAAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR CCA 90 bp | CTGCACAGCCTTACCTGGGGTGTGGAGCTCCCAGGCTTCCTGTTAGCTTTCTTGGGTCCTTGTGAGCTGTaGTCCTGCCCTGTAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LHSLTWGVELPGFLLAFLGPCEL*SCPVEE Trigger: TTCCTCTACAGGGCAGGACCACAGCTCACAAGGACC...CAAGAAAGCTAACAGGAAGCCTGGGAGCTCCACACCCCAGGTAAGGCTGTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
||
| CDS-3UTR CCA 90 bp | TGCCTCTCAGCCTTCCTGGGGAAGCTTGTCCCCGAGAGAAGCTGCAGACGCTCATTGAGAAGTACTGCTTaGGACAGCTGTGGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLSAFLGKLVPERSCRRSLRSTA*DSCGWQ Trigger: CTGCCAACCACAGCTGTCCCAAGCAGTACTTCTCAA...TGAGCGTCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGTCCCCGAGAGAAGCTGCAGACGTCCAGAGATTTGGACTaGGGACCTGGAGGTTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: QLPLSLPGEACPREKLQTSRDLD*GPGGLI Trigger: AATCAAACCTCCAGGTCCCCAGTCCAAATCTCTGGA...CGTCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR CCA 90 bp | TGCAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGTCCCCGAGAGAAGCTGCAGAAGGTATCCAGAGATTTaGACTGGGGACCTGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CSCLSAFLGKLVPERSCRRYPEI*TGDLEV Trigger: AACCTCCAGGTCCCCAGTCCAAATCTCTGGATACCT...TCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR CCA 90 bp | AATCTCCAGTGCTGTGTATCCCTTCCCCAGGGCCTTTTAGGTGAAAGCAGAACAGGGGTGGAGCTGGGGTaGAGATCCATGGGTGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLQCCVSLPQGLLGESRTGVELG*RSMGGG Trigger: CCCACCACCCATGGATCTCCACCCCAGCTCCACCCC...TGTTCTGCTTTCACCTAAAAGGCCCTGGGGAAGGGATACACAGCACTGGAGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR TCA 90 bp | AAGCAGAACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGAGGCTTCCAGGGTCTaGAGTGAGGTTCCAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KQNIWSRCSCLSAFLGKLEASRV*SEVPAK Trigger: CTTTGCTGGAACCTCACTTCAGACCCTGGAAGCCTC...AAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTTCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR GCA 90 bp | GGCCTTTTAGGTGAAAGCAGAACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTTGTGAGCTGTGGTCCTaGCCTGTAGAGGAAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLLGESRTSGADAAASQPCELWS*PVEEAG Trigger: CCCAGCTTCCTCTACAGGGCAGGACCACAGCTCACA...AGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTTCTGCTTTCACCTAAAAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGAACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGTCAAGAAGAGGGCATTaGGGTCCTTGTGAGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRTSGADAAASQPSWGSLSRRGH*GPCELW Trigger: CCACAGCTCACAAGGACCCCAATGCCCTCTTCTTGA...CAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTTCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTCTCAGCCTTCCTGGGGAAGCTTGTCCCCGAGAGAAGCTGCAGACGCTCATCCAGAGATTTGGACTaGGGACCTGGAGGTTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: CLSAFLGKLVPERSCRRSSRDLD*GPGGLI Trigger: AATCAAACCTCCAGGTCCCCAGTCCAAATCTCTGGA...TGAGCGTCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGAACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGTTGACTCTGAATCCCTaGAGCCTGCTCAGAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRTSGADAAASQPSWGSLLTLNP*SLLRSP Trigger: TGGACTTCTGAGCAGGCTTCAGGGATTCAGAGTCAA...CAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR GCA 90 bp | GGCCTTTTAGGTGAAAGCAGAACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTTTCCAACTGTCCTCGTaGTGCCATCACTCCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GLLGESRTSGADAAASQPFQLSS*CHHSLQ Trigger: CTGGAGGGAGTGATGGCAGCACGAGGACAGTTGGAA...AGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTTCTGCTTTCACCTAAAAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGAACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGGGAGTTGAGAAGTACTaGTTGGGACAGCTGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRTSGADAAASQPSWGSLGVEKY*LGQLWL Trigger: CAACCACAGCTGTCCCAAGCAGTACTTCTCAACTCC...CAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR CCA 90 bp | AATTACAGTGAAGGGAAGGAGGGCATTGTGGGGGTGTTGGAGGCGCGGGAAGGCGTTTATTTAGGAGTCTaGGGTCACAGGCAGGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: NYSEGKEGIVGVLEAREGVYLGV*GHRQEL Trigger: TAGCTCCTGCCTGTGACCCCAGACTCCTAAATAAAC...GCCTTCCCGCGCCTCCAACACCCCCACAATGCCCTCCTTCCCTTCACTGTAATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
||
| CDS-3UTR CCA 90 bp | GGCCTTTTAGGTGAAAGCAGAACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTGGTCCTTGTGAGCTGTaGTCCTGCCCTGTAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLLGESRTSGADAAASQPGPCEL*SCPVEE Trigger: TTCCTCTACAGGGCAGGACCACAGCTCACAAGGACC...AGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTTCTGCTTTCACCTAAAAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGAACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGTTGAGAAGTACTGCTTaGGACAGCTGTGGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRTSGADAAASQPSWGSLLRSTA*DSCGWQ Trigger: CTGCCAACCACAGCTGTCCCAAGCAGTACTTCTCAA...CAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGCAGGGTCCAGGAGCTCTGTTGCCCCAGTGAAGAACATTGGTCCCTGATTAGGTATCCAGAGATTTaGACTGGGGACCTGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GGRVQELCCPSEEHWSLIRYPEI*TGDLEV Trigger: AACCTCCAGGTCCCCAGTCCAAATCTCTGGATACCT...AATCAGGGACCAATGTTCTTCACTGGGGCAACAGAGCTCCTGGACCCTGCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
||
| CDS-3UTR CCA 90 bp | TACAATCTCCAGTGCTGTGTATCCCTTCCCCAGGGCCTTTTAGGTGAAAGCAGAAACAGGGGGTGGAGCTaGGGTGGAGATCCATGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YNLQCCVSLPQGLLGESRNRGWS*GGDPWV Trigger: CACCCATGGATCTCCACCCCAGCTCCACCCCCTGTT...TCTGCTTTCACCTAAAAGGCCCTGGGGAAGGGATACACAGCACTGGAGATTGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR TCA 90 bp | AAGCAGAACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTTTGACTCTGAATCCCTaGAGCCTGCTCAGAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KQNIWSRCSCLSAFLGKLLTLNP*SLLRSP Trigger: TGGACTTCTGAGCAGGCTTCAGGGATTCAGAGTCAA...AAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTTCTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR TCA 90 bp | TACAATCTCCAGTGCTGTGTATCCCTTCCCCAGGGCCTTTTAGGTGAAAGCAGAGTCCACCCTGGAGGTTaGATGCCAGGGAGCCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: YNLQCCVSLPQGLLGESRVHPGG*MPGSLC Trigger: ACAAAGGCTCCCTGGCATTCAACCTCCAGGGTGGAC...TCTGCTTTCACCTAAAAGGCCCTGGGGAAGGGATACACAGCACTGGAGATTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR GCA 90 bp | TACAATCTCCAGTGCTGTGTATCCCTTCCCCAGGGCCTTTTAGGTGAAAGCAGAAAGAGGAGGCGAACCTaGCCAGAAAGCTGTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YNLQCCVSLPQGLLGESRKRRRT*PESCPR Trigger: CCTGGGACAGCTTTCTGGGCAGGTTCGCCTCCTCTT...TCTGCTTTCACCTAAAAGGCCCTGGGGAAGGGATACACAGCACTGGAGATTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR GCA 90 bp | AAGCAGAACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTACCCTGGAGGTTGAATaGCAGGGAGCCTTTGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KQNIWSRCSCLSAFLGKLTLEVE*QGAFVE Trigger: TTCAACAAAGGCTCCCTGGCATTCAACCTCCAGGGT...AAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTTCTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR CCA 90 bp | AAGCAGAACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTTTGCTCTGTTCCGTCTaGGTTTTCCATTCTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KQNIWSRCSCLSAFLGKLLLCSV*VFHSPR Trigger: CCTGGGAGAATGGAAAACCCAGACGGAACAGAGCAA...AAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTTCTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS-3UTR CCA 90 bp | CTGCACAGCCTTACCTGGGGTGTGGAGCTCCCAGGCTTCCTGTTAGCTTTCTTGTCCAGAGATTTGGACTaGGGACCTGGAGGTTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: LHSLTWGVELPGFLLAFLSRDLD*GPGGLI Trigger: AATCAAACCTCCAGGTCCCCAGTCCAAATCTCTGGA...CAAGAAAGCTAACAGGAAGCCTGGGAGCTCCACACCCCAGGTAAGGCTGTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
||
| 3UTR CAA 72 bp | AATTACAGTGAAGGGAAGGAGGGCATTGTGGGGGTGTaGGAGGCGCGGGAAGGCTTAAACTTGAAGCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NYSEGKEGIVGV*EAREGLNLKQR Trigger: CCTTTGCTTCAAGTTTAAGCCTTCCCGCGCCTCCAACACCCCCACAATGCCCTCCTTCCCTTCACTGTAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
||
| 3UTR CAA 72 bp | TGTGGAAATTATAAAGAGCCTTCAAGCGCTCTGTGCTaGTCCTGCTGTGTGAGCCGAGGAGCCTGCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CGNYKEPSSALC*SCCVSRGACLL Trigger: CAAGAGGCAGGCTCCTCGGCTCACACAGCAGGACAAGCACAGAGCGCTTGAAGGCTCTTTATAATTTCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
||
| CDS-3UTR TCA 90 bp | AGCAGAACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGGGAACTTGTTTAGTGTaGGGAGTTGAGAAGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRTSGADAAASQPSWGSLGTCLV*GVEKYC Trigger: GCAGTACTTCTCAACTCCTCACACTAAACAAGTTCC...CAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTTCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR GCA 90 bp | GGCCTTTTAGGTGAAAGCAGAACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTGGAGTTGAGAAGTACTaGTTGGGACAGCTGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLLGESRTSGADAAASQPGVEKY*LGQLWL Trigger: CAACCACAGCTGTCCCAAGCAGTACTTCTCAACTCC...AGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTTCTGCTTTCACCTAAAAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR GCA 90 bp | GGCCTTTTAGGTGAAAGCAGAACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTACCCTGGAGGTTGAATaGCAGGGAGCCTTTGTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLLGESRTSGADAAASQPTLEVE*QGAFVE Trigger: TTCAACAAAGGCTCCCTGGCATTCAACCTCCAGGGT...AGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTTCTGCTTTCACCTAAAAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR TCA 90 bp | AAGCAGAACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGGAACTTGTTTAGTGTaGGGAGTTGAGAAGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: KQNIWSRCSCLSAFLGKLGTCLV*GVEKYC Trigger: GCAGTACTTCTCAACTCCTCACACTAAACAAGTTCC...AAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTTCTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR GCA 90 bp | AATCTCCAGTGCTGTGTATCCCTTCCCCAGGGCCTTTTAGGTGAAAGCAGAACACCCCGAAGCAGTTGTTaGAAGCTCAAGAAGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLQCCVSLPQGLLGESRTPRSSC*KLKKRA Trigger: TGCCCTCTTCTTGAGCTTGCAACAACTGCTTCGGGG...TGTTCTGCTTTCACCTAAAAGGCCCTGGGGAAGGGATACACAGCACTGGAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR CCA 90 bp | GGCCTTTTAGGTGAAAGCAGAACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTGTTTATTTAGGAGTCTaGGGTCACAGGCAGGAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: GLLGESRTSGADAAASQPVYLGV*GHRQEL Trigger: TAGCTCCTGCCTGTGACCCCAGACTCCTAAATAAAC...AGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTTCTGCTTTCACCTAAAAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR CCA 90 bp | TACAATCTCCAGTGCTGTGTATCCCTTCCCCAGGGCCTTTTAGGTGAAAGCAGAATCAGGAGCAAGGCTTaGAGAAGGAGGAAGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: YNLQCCVSLPQGLLGESRIRSKA*RRRKST Trigger: GGTGGACTTCCTCCTTCTCCAAGCCTTGCTCCTGAT...TCTGCTTTCACCTAAAAGGCCCTGGGGAAGGGATACACAGCACTGGAGATTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR CCA 90 bp | AATCTCCAGTGCTGTGTATCCCTTCCCCAGGGCCTTTTAGGTGAAAGCAGAACATTGAGAAGTACTGCTTaGGACAGCTGTGGTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NLQCCVSLPQGLLGESRTLRSTA*DSCGWQ Trigger: CTGCCAACCACAGCTGTCCCAAGCAGTACTTCTCAA...TGTTCTGCTTTCACCTAAAAGGCCCTGGGGAAGGGATACACAGCACTGGAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR CCA 90 bp | AATCTCCAGTGCTGTGTATCCCTTCCCCAGGGCCTTTTAGGTGAAAGCAGAACAAGGTATCCAGAGATTTaGACTGGGGACCTGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NLQCCVSLPQGLLGESRTRYPEI*TGDLEV Trigger: AACCTCCAGGTCCCCAGTCCAAATCTCTGGATACCT...TGTTCTGCTTTCACCTAAAAGGCCCTGGGGAAGGGATACACAGCACTGGAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR TCA 90 bp | TGGGAGGGTTCCAATAAAGTTTGGAGTGGCCACACAGGGCTGCTTTTTAGGTGCGGAACTTGTTTAGTGTaGGGAGTTGAGAAGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: WEGSNKVWSGHTGLLFRCGTCLV*GVEKYC Trigger: GCAGTACTTCTCAACTCCTCACACTAAACAAGTTCC...GCACCTAAAAAGCAGCCCTGTGTGGCCACTCCAAACTTTATTGGAACCCTCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
||
| CDS-3UTR CCA 90 bp | AATCTCCAGTGCTGTGTATCCCTTCCCCAGGGCCTTTTAGGTGAAAGCAGAACAGGTGACGGTGAAGGGTaGATAAGGAGAAACTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: NLQCCVSLPQGLLGESRTGDGEG*IRRNLF Trigger: GAATAAGTTTCTCCTTATCCACCCTTCACCGTCACC...TGTTCTGCTTTCACCTAAAAGGCCCTGGGGAAGGGATACACAGCACTGGAGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232217.2 |
||
| CDS-3UTR GCA 90 bp | TCTTTATCAAGAGCAGTATATCTCGAGGACCATACAGTCTCACTGAGAATTACATTCCAACTGTCCTCGTaGTGCCATCACTCCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSRAVYLEDHTVSLRITFQLSS*CHHSLQ Trigger: CTGGAGGGAGTGATGGCAGCACGAGGACAGTTGGAA...TGTAATTCTCAGTGAGACTGTATGGTCCTCGAGATATACTGCTCTTGATAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
||
| CDS-3UTR CCA 90 bp | AGTGATTTTCAAATTTATACCGAAAATAGACCAAAGATCGCTAGCTGCTCTGATCCCTGTAGAGGAAGCTaGGTTCCTAGGAGGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SDFQIYTENRPKIASCSDPCRGS*VPRRPC Trigger: GCAGGGCCTCCTAGGAACCCAGCTTCCTCTACAGGG...ATCAGAGCAGCTAGCGATCTTTGGTCTATTTTCGGTATAAATTTGAAAATCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 |
||
| CDS-3UTR CCA 90 bp | AGTGATTTTCAAATTTATACCGAAAATAGACCAAAGATCGCTAGCTGCTCTGATAACAGGGGGTGGAGCTaGGGTGGAGATCCATGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SDFQIYTENRPKIASCSDNRGWS*GGDPWV Trigger: CACCCATGGATCTCCACCCCAGCTCCACCCCCTGTT...ATCAGAGCAGCTAGCGATCTTTGGTCTATTTTCGGTATAAATTTGAAAATCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 |
||
| CDS-3UTR TCA 90 bp | AGTGATTTTCAAATTTATACCGAAAATAGACCAAAGATCGCTAGCTGCTCTGATGAGGCTTCCAGGGTCTaGAGTGAGGTTCCAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SDFQIYTENRPKIASCSDEASRV*SEVPAK Trigger: CTTTGCTGGAACCTCACTTCAGACCCTGGAAGCCTC...ATCAGAGCAGCTAGCGATCTTTGGTCTATTTTCGGTATAAATTTGAAAATCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 |
||
| CDS-3UTR GCA 90 bp | TCTTTATCAAGAGCAGTATATCTCGAGGACCATACAGTCTCACTGAGAATTACAGGAGTTGAGAAGTACTaGTTGGGACAGCTGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLSRAVYLEDHTVSLRITGVEKY*LGQLWL Trigger: CAACCACAGCTGTCCCAAGCAGTACTTCTCAACTCC...TGTAATTCTCAGTGAGACTGTATGGTCCTCGAGATATACTGCTCTTGATAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
||
| CDS-3UTR CCA 90 bp | TCTTTATCAAGAGCAGTATATCTCGAGGACCATACAGTCTCACTGAGAATTACATTGCTCTGTTCCGTCTaGGTTTTCCATTCTCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLSRAVYLEDHTVSLRITLLCSV*VFHSPR Trigger: CCTGGGAGAATGGAAAACCCAGACGGAACAGAGCAA...TGTAATTCTCAGTGAGACTGTATGGTCCTCGAGATATACTGCTCTTGATAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115437.4 |
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| CDS-3UTR GCA 90 bp | AGTGATTTTCAAATTTATACCGAAAATAGACCAAAGATCGCTAGCTGCTCTGATCCCCGAAGCAGTTGTTaGAAGCTCAAGAAGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SDFQIYTENRPKIASCSDPRSSC*KLKKRA Trigger: TGCCCTCTTCTTGAGCTTGCAACAACTGCTTCGGGG...ATCAGAGCAGCTAGCGATCTTTGGTCTATTTTCGGTATAAATTTGAAAATCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 |
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| CDS GCA 90 bp | TGGGTTCCTAGGAGGCCCTGCAGGGCCCCCAAGAGGAGGCGAACCTaGCCAGAAAGCTGTCCCAGGAGGGATGAGAGGCAGGAGGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: WVPRRPCRAPKRRRT*PESCPRRDERQEGS Trigger: GGAACCCTCCTGCCTCTCATCCCTCCTGGGACAGCTTTCTGGGCAGGTTCGCCTCCTCTTGGGGGCCCTGCAGGGCCTCCTAGGAACCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000231826.2 ENSMUST00000232217.2 |
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| CDS-3UTR CAA 90 bp | TGCCTCTCAGCCTTCCTGGGGAAGCTTGTCCCCGAGAGAAGCTGCAGACGCTCAAGTCCACCCTGGAGGTaGAATGCCAGGGAGCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CLSAFLGKLVPERSCRRSSPPWR*NAREPL Trigger: CAAAGGCTCCCTGGCATTCAACCTCCAGGGTGGACT...TGAGCGTCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS-3UTR CAA 90 bp | TGCCTCTCAGCCTTCCTGGGGAAGCTTGTCCCCGAGAGAAGCTGCAGACGCTCACAGGTATCCAGAGATTaGGACTGGGGACCTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CLSAFLGKLVPERSCRRSQVSRD*DWGPGG Trigger: ACCTCCAGGTCCCCAGTCCAAATCTCTGGATACCTG...TGAGCGTCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS-3UTR CAA 90 bp | TGCCTCTCAGCCTTCCTGGGGAAGCTTGTCCCCGAGAGAAGCTGCAGACGCTCACATCAGGAGCAAGGCTaGGAGAAGGAGGAAGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CLSAFLGKLVPERSCRRSHQEQG*EKEEVH Trigger: GTGGACTTCCTCCTTCTCCAAGCCTTGCTCCTGATG...TGAGCGTCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS-3UTR CAA 90 bp | TGCAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGTCCCCGAGAGAAGCTGCAGACATCAGGAGCAAGGCTaGGAGAAGGAGGAAGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CSCLSAFLGKLVPERSCRHQEQG*EKEEVH Trigger: GTGGACTTCCTCCTTCTCCAAGCCTTGCTCCTGATG...TCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS TCA 90 bp | GTTGAGAAGTACTGCTTGGGACAGCTGTGGTTGGCAGGGTCCGTCTaGCACAGAGGGTGGGACCTTCTACCAGAAGCAGGAAGCGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: VEKYCLGQLWLAGSV*HRGWDLLPEAGSAP Trigger: AGGTGCGCTTCCTGCTTCTGGTAGAAGGTCCCACCCTCTGTGTCAGACGGACCCTGCCAACCACAGCTGTCCCAAGCAGTACTTCTCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS CCA 90 bp | GCACCTTTCCCCGAAGCAGTTGTTGCAAGCTCAAGAAGAGGGCATTaGGGTCCTTGTGAGCTGTGGTCCTGCCCTGTAGAGGAAGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: APFPEAVVASSRRGH*GPCELWSCPVEEAG Trigger: CCCAGCTTCCTCTACAGGGCAGGACCACAGCTCACAAGGACCCCAATGCCCTCTTCTTGAGCTTGCAACAACTGCTTCGGGGAAAGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS CCA 90 bp | GTGTGTCCATCAGGAGCAAGGCTTGGAGAAGGAGGAAGTCCACCCTaGAGGTTGAATGCCAGGGAGCCTTTGTTGAAAGCTCCGGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: VCPSGARLGEGGSPP*RLNAREPLLKAPGE Trigger: CTCGCCCGGAGCTTTCAACAAAGGCTCCCTGGCATTCAACCTCCAGGGTGGACTTCCTCCTTCTCCAAGCCTTGCTCCTGATGGACACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS-3UTR CAA 90 bp | TGCAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTGTCCCCGAGAGAAGCTGCAGAGTTGAGAAGTACTGCTaGGGACAGCTGTGGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CSCLSAFLGKLVPERSCRVEKYC*GQLWLA Trigger: TGCCAACCACAGCTGTCCCAAGCAGTACTTCTCAAC...TCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS-3UTR CAA 90 bp | TGCCTCTCAGCCTTCCTGGGGAAGCTTGTCCCCGAGAGAAGCTGCAGACGCTCAGTTGAGAAGTACTGCTaGGGACAGCTGTGGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CLSAFLGKLVPERSCRRSVEKYC*GQLWLA Trigger: TGCCAACCACAGCTGTCCCAAGCAGTACTTCTCAAC...TGAGCGTCTGCAGCTTCTCTCGGGGACAAGCTTCCCCAGGAAGGCTGAGAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS TCA 90 bp | CGAAGCAGTTGTTGCAAGCTCAAGAAGAGGGCATTGGGGTCCTTGTaGGCTGTGGTCCTGCCCTGTAGAGGAAGCTGGGTTCCTAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSSCCKLKKRALGSL*AVVLPCRGSWVPRR Trigger: CCTCCTAGGAACCCAGCTTCCTCTACAGGGCAGGACCACAGCTCACAAGGACCCCAATGCCCTCTTCTTGAGCTTGCAACAACTGCTTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS CCA 90 bp | GGCTGTGAAGGAGGTGGGAGTCACGCAGCAGTTTATTTAGGAGTCTaGGGTCACAGGCAGGAGCTACGGGGCTGGACAGAGTTAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GCEGGGSHAAVYLGV*GHRQELRGWTELVL Trigger: CAAGACTAACTCTGTCCAGCCCCGTAGCTCCTGCCTGTGACCCCAGACTCCTAAATAAACTGCTGCGTGACTCCCACCTCCTTCACAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000231826.2 ENSMUST00000232217.2 |
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| CDS-3UTR CAA 90 bp | AAGCAGAACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTTCCTGGGGAAGCTTCATCAGGAGCAAGGCTaGGAGAAGGAGGAAGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: KQNIWSRCSCLSAFLGKLHQEQG*EKEEVH Trigger: GTGGACTTCCTCCTTCTCCAAGCCTTGCTCCTGATG...AAGCTTCCCCAGGAAGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTTCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS-3UTR CAA 90 bp | GGCCTTTTAGGTGAAAGCAGAACATCTGGAGCAGATGCAGCTGCCTCTCAGCCTCAGGTATCCAGAGATTaGGACTGGGGACCTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GLLGESRTSGADAAASQPQVSRD*DWGPGG Trigger: ACCTCCAGGTCCCCAGTCCAAATCTCTGGATACCTG...AGGCTGAGAGGCAGCTGCATCTGCTCCAGATGTTCTGCTTTCACCTAAAAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS-3UTR CAA 90 bp | TACAATCTCCAGTGCTGTGTATCCCTTCCCCAGGGCCTTTTAGGTGAAAGCAGAAGTCCACCCTGGAGGTaGAATGCCAGGGAGCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: YNLQCCVSLPQGLLGESRSPPWR*NAREPL Trigger: CAAAGGCTCCCTGGCATTCAACCTCCAGGGTGGACT...TCTGCTTTCACCTAAAAGGCCCTGGGGAAGGGATACACAGCACTGGAGATTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS-3UTR CAA 90 bp | TACAATCTCCAGTGCTGTGTATCCCTTCCCCAGGGCCTTTTAGGTGAAAGCAGACAGGTATCCAGAGATTaGGACTGGGGACCTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: YNLQCCVSLPQGLLGESRQVSRD*DWGPGG Trigger: ACCTCCAGGTCCCCAGTCCAAATCTCTGGATACCTG...TCTGCTTTCACCTAAAAGGCCCTGGGGAAGGGATACACAGCACTGGAGATTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS CCA 90 bp | GTTAGTCTTGCCACTGCAAGAAGCATGGCCGCCAGGAGCAAATCTTaGATGAGGAGAGGTGACGGTGAAGGGTGGATAAGGAGAAACTTA | + |
|
Preference number: 5 (lower is better) Translates to: VSLATARSMAARSKS*MRRGDGEGWIRRNL Trigger: TAAGTTTCTCCTTATCCACCCTTCACCGTCACCTCTCCTCATCCAAGATTTGCTCCTGGCGGCCATGCTTCTTGCAGTGGCAAGACTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232217.2 |
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| CDS TCA 90 bp | AACAATCCAGAAGTCCTGTTTGGGAACTTGTTTAGTGTGAGGAGTTaGGAAGTACTGCTTGGGACAGCTGTGGTTGGCAGGGTCCGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: NNPEVLFGNLFSVRS*EVLLGTAVVGRVRL Trigger: CAGACGGACCCTGCCAACCACAGCTGTCCCAAGCAGTACTTCTCAACTCCTCACACTAAACAAGTTCCCAAACAGGACTTCTGGATTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS TCA 90 bp | TCGTCTCCAACAATCCAGAAGTCCTGTTTGGGAACTTGTTTAGTGTaGGGAGTTGAGAAGTACTGCTTGGGACAGCTGTGGTTGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSPTIQKSCLGTCLV*GVEKYCLGQLWLAG Trigger: CCCTGCCAACCACAGCTGTCCCAAGCAGTACTTCTCAACTCCTCACACTAAACAAGTTCCCAAACAGGACTTCTGGATTGTTGGAGACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS GCA 72 bp | AGGAGGCCCTGCAGGGCCCCCAAGAGGAGGCGAACCTaGCCAGAAAGCTGTCCCAGGAGGGATGAGAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RRPCRAPKRRRT*PESCPRRDERQ Trigger: CTGCCTCTCATCCCTCCTGGGACAGCTTTCTGGGCAGGTTCGCCTCCTCTTGGGGGCCCTGCAGGGCCTCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000231826.2 ENSMUST00000232217.2 |
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| CDS GCA 72 bp | CTGCCCTGTAGAGGAAGCTGGGTTCCTAGGAGGCCCTaGAGGGCCCCCAAGAGGAGGCGAACCTGCCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LPCRGSWVPRRP*RAPKRRRTCPE Trigger: TTCTGGGCAGGTTCGCCTCCTCTTGGGGGCCCTGCAGGGCCTCCTAGGAACCCAGCTTCCTCTACAGGGCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS GCA 72 bp | CCAACAATCCAGAAGTCCTGGGTTCCTAGGAGGCCCTaGAGGGCCCCCAAGAGGAGGCGAACCTGCCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PTIQKSWVPRRP*RAPKRRRTCPE Trigger: TTCTGGGCAGGTTCGCCTCCTCTTGGGGGCCCTGCAGGGCCTCCTAGGAACCCAGGACTTCTGGATTGTTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231826.2 |
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| CDS CCA 72 bp | GAAACAGGGGGTGGAGCTGGGGTGGAGATCCATGGGTaGTGGGCAAGGCAGGTGAAGGAGGGAAGGGTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: ETGGGAGVEIHG*WARQVKEGRVC Trigger: ACACACCCTTCCCTCCTTCACCTGCCTTGCCCACCACCCATGGATCTCCACCCCAGCTCCACCCCCTGTTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS GCA 72 bp | AGAAGAGGGCATTGGGGTCCTTGTGAGCTGTGGTCCTaGCCTGTAGAGGAAGCTGGGTTCCTAGGAGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: RRGHWGPCELWS*PVEEAGFLGGP Trigger: AGGGCCTCCTAGGAACCCAGCTTCCTCTACAGGGCAGGACCACAGCTCACAAGGACCCCAATGCCCTCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS CCA 72 bp | GGAGGTGGGAGTCACGCAGCAGTTTATTTAGGAGTCTaGGGTCACAGGCAGGAGCTACGGGGCTGGACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GGGSHAAVYLGV*GHRQELRGWTE Trigger: CTCTGTCCAGCCCCGTAGCTCCTGCCTGTGACCCCAGACTCCTAAATAAACTGCTGCGTGACTCCCACCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000231826.2 ENSMUST00000232217.2 |
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| CDS CAA 90 bp | GTCTGGGGTCACAGGCAGGAGCTACGGGGCTGGACAGAGTTAGTCTaGCCACTGCAAGAAGCATGGCCGCCAGGAGCAAATCAGTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VWGHRQELRGWTELV*PLQEAWPPGANQSA Trigger: AGCTGACTGATTTGCTCCTGGCGGCCATGCTTCTTGCAGTGGCAAGACTAACTCTGTCCAGCCCCGTAGCTCCTGCCTGTGACCCCAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000231826.2 |
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| CDS TCA 72 bp | TACTGCTTGGGACAGCTGTGGTTGGCAGGGTCCGTCTaGCACAGAGGGTGGGACCTTCTACCAGAAGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: YCLGQLWLAGSV*HRGWDLLPEAG Trigger: TCCTGCTTCTGGTAGAAGGTCCCACCCTCTGTGTCAGACGGACCCTGCCAACCACAGCTGTCCCAAGCAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS CCA 72 bp | GAGGAGTTGAGAAGTACTGCTTGGGACAGCTGTGGTTaGCAGGGTCCGTCTGACACAGAGGGTGGGACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: EELRSTAWDSCG*QGPSDTEGGTF Trigger: GAAGGTCCCACCCTCTGTGTCAGACGGACCCTGCCAACCACAGCTGTCCCAAGCAGTACTTCTCAACTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS CAA 72 bp | CACAGGCAGGAGCTACGGGGCTGGACAGAGTTAGTCTaGCCACTGCAAGAAGCATGGCCGCCAGGAGCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: HRQELRGWTELV*PLQEAWPPGAN Trigger: ATTTGCTCCTGGCGGCCATGCTTCTTGCAGTGGCAAGACTAACTCTGTCCAGCCCCGTAGCTCCTGCCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000231826.2 ENSMUST00000232217.2 |
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| CDS CAA 72 bp | AGTCCACCCTGGAGGTTGAATGCCAGGGAGCCTTTGTaGAAAGCTCCGGGCGAGATGTCTGAGGCTTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SPPWRLNAREPL*KAPGEMSEASR Trigger: CCTGGAAGCCTCAGACATCTCGCCCGGAGCTTTCAACAAAGGCTCCCTGGCATTCAACCTCCAGGGTGGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000231826.2 ENSMUST00000232217.2 |
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| CDS CCA 72 bp | TTAGGAGTCTGGGGTCACAGGCAGGAGCTACGGGGCTaGACAGAGTTAGTCTTGCCACTGCAAGAAGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: LGVWGHRQELRG*TELVLPLQEAW Trigger: CCATGCTTCTTGCAGTGGCAAGACTAACTCTGTCCAGCCCCGTAGCTCCTGCCTGTGACCCCAGACTCCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000231826.2 ENSMUST00000232217.2 |
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| CDS CAA 90 bp | GGGACCTTCTACCAGAAGCAGGAAGCGCACCTTTCCCCGAAGCAGTaGTTGCAAGCTCAAGAAGAGGGCATTGGGGTCCTTGTGAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GTFYQKQEAHLSPKQ*LQAQEEGIGVLVSC Trigger: ACAGCTCACAAGGACCCCAATGCCCTCTTCTTGAGCTTGCAACAACTGCTTCGGGGAAAGGTGCGCTTCCTGCTTCTGGTAGAAGGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS CAA 72 bp | CAGAAGCAGGAAGCGCACCTTTCCCCGAAGCAGTTGTaGCAAGCTCAAGAAGAGGGCATTGGGGTCCTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: QKQEAHLSPKQL*QAQEEGIGVLV Trigger: CACAAGGACCCCAATGCCCTCTTCTTGAGCTTGCAACAACTGCTTCGGGGAAAGGTGCGCTTCCTGCTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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| CDS CAA 90 bp | ACCTTCTACCAGAAGCAGGAAGCGCACCTTTCCCCGAAGCAGTTGTaGCAAGCTCAAGAAGAGGGCATTGGGGTCCTTGTGAGCTGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TFYQKQEAHLSPKQL*QAQEEGIGVLVSCG Trigger: ACCACAGCTCACAAGGACCCCAATGCCCTCTTCTTGAGCTTGCAACAACTGCTTCGGGGAAAGGTGCGCTTCCTGCTTCTGGTAGAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS CCA 72 bp | TCAGGAGCAAGGCTTGGAGAAGGAGGAAGTCCACCCTaGAGGTTGAATGCCAGGGAGCCTTTGTTGAAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SGARLGEGGSPP*RLNAREPLLKA Trigger: AGCTTTCAACAAAGGCTCCCTGGCATTCAACCTCCAGGGTGGACTTCCTCCTTCTCCAAGCCTTGCTCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS CAA 72 bp | AGTAGAAGGGACACTGCCCCTAGAATGTCCTGTGCCTaGCTCTGTTCCGTCTGGGTTTTCCATTCTCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRRDTAPRMSCA*LCSVWVFHSPR Trigger: CCTGGGAGAATGGAAAACCCAGACGGAACAGAGCAAGGCACAGGACATTCTAGGGGCAGTGTCCCTTCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000231826.2 ENSMUST00000232217.2 |
||
| CDS CAA 72 bp | TACCAGAAGCAGGAAGCGCACCTTTCCCCGAAGCAGTaGTTGCAAGCTCAAGAAGAGGGCATTGGGGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: YQKQEAHLSPKQ*LQAQEEGIGVL Trigger: AAGGACCCCAATGCCCTCTTCTTGAGCTTGCAACAACTGCTTCGGGGAAAGGTGCGCTTCCTGCTTCTGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS CCA 72 bp | CTGAGACAAATTCCTGGGATGAGGGTACATTGTGACTaGATGAGGGGCGGTAGAGTTAGGCATGGTGGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LRQIPGMRVHCD*MRGGRVRHGGG Trigger: TCCACCACCATGCCTAACTCTACCGCCCCTCATCCAGTCACAATGTACCCTCATCCCAGGAATTTGTCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS TCA 72 bp | GAAGTCCTGTTTGGGAACTTGTTTAGTGTGAGGAGTTaGGAAGTACTGCTTGGGACAGCTGTGGTTGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: EVLFGNLFSVRS*EVLLGTAVVGR Trigger: CCTGCCAACCACAGCTGTCCCAAGCAGTACTTCTCAACTCCTCACACTAAACAAGTTCCCAAACAGGACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
||
| CDS TCA 72 bp | ACAATCCAGAAGTCCTGTTTGGGAACTTGTTTAGTGTaGGGAGTTGAGAAGTACTGCTTGGGACAGCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TIQKSCLGTCLV*GVEKYCLGQLW Trigger: CCACAGCTGTCCCAAGCAGTACTTCTCAACTCCTCACACTAAACAAGTTCCCAAACAGGACTTCTGGATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076422.13 ENSMUST00000115437.4 ENSMUST00000232217.2 |
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