Pregenerated sensors for THOP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004929Ensembl transcript IDs: ENSMUST00000005057.7
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGAAACTTCCCCAAGCTCATCTGTACGCCCAAGGGTTGCTGAGCTaGCCAGCAGGCTGGGCTAAGGCACAGGGCGGCGAGCTGGGGACC | + |
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Preference number: 1 (lower is better) Translates to: WKLPQAHLYAQGLLS*PAGWAKAQGGELGT Trigger: GGTCCCCAGCTCGCCGCCCTGTGCCTTAGCCCAGCCTGCTGGGCAGCTCAGCAACCCTTGGGCGTACAGATGAGCTTGGGGAAGTTTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| 3UTR TCA 90 bp | AAGGATGGAAACTTCCCCAAGCTCATCTGTACGCCCAAGGGTTGCTaGGCTGCCCAGCAGGCTGGGCTAAGGCACAGGGCGGCGAGCTGG | + |
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Preference number: 1 (lower is better) Translates to: KDGNFPKLICTPKGC*AAQQAGLRHRAASW Trigger: CCAGCTCGCCGCCCTGTGCCTTAGCCCAGCCTGCTGGGCAGCTCAGCAACCCTTGGGCGTACAGATGAGCTTGGGGAAGTTTCCATCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| 3UTR CCA 90 bp | CACATGTCACACCATGATGCCAGTGAGGAAGTAGCTGGCCAAGCCTaGGGCAGAGCAGTACAGAGAGAGGACCAGGCAGGGTGCCCCTGT | + |
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Preference number: 1 (lower is better) Translates to: HMSHHDASEEVAGQA*GRAVQREDQAGCPC Trigger: ACAGGGGCACCCTGCCTGGTCCTCTCTCTGTACTGCTCTGCCCCAGGCTTGGCCAGCTACTTCCTCACTGGCATCATGGTGTGACATGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| 3UTR CAA 90 bp | GGACAAGGATGGAAACTTCCCCAAGCTCATCTGTACGCCCAAGGGTaGCTGAGCTGCCCAGCAGGCTGGGCTAAGGCACAGGGCGGCGAG | + |
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Preference number: 2 (lower is better) Translates to: GQGWKLPQAHLYAQG*LSCPAGWAKAQGGE Trigger: CTCGCCGCCCTGTGCCTTAGCCCAGCCTGCTGGGCAGCTCAGCAACCCTTGGGCGTACAGATGAGCTTGGGGAAGTTTCCATCCTTGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| 3UTR-3UTR TCA 90 bp | TGGCAGCCCCTCACCAAGTCTTGCTCCCACCCATTCCCTAGAGAGGTCCAGAAAACGCCCAAGGGTTGCTaGGCTGCCCAGCAGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: WQPLTKSCSHPFPREVQKTPKGC*AAQQAG Trigger: CCCAGCCTGCTGGGCAGCTCAGCAACCCTTGGGCGT...TTTCTGGACCTCTCTAGGGAATGGGTGGGAGCAAGACTTGGTGAGGGGCTGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| 3UTR-3UTR GCA 90 bp | CCTGGAGCCGGGGTGGGACAAGGATGGAAACTTCCCCAAGCTCATCTGTACGCCCAAGGGTTGCTGAGCTaGCCAGCAGGCTGGGCTAAG | + |
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Preference number: 2 (lower is better) Translates to: PGAGVGQGWKLPQAHLYAQGLLS*PAGWAK Trigger: CTTAGCCCAGCCTGCTGGGCAGCTCAGCAACCCTTG...GGCGTACAGATGAGCTTGGGGAAGTTTCCATCCTTGTCCCACCCCGGCTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| 3UTR-3UTR CCA 90 bp | GTGGAGTTTAATGTCCAACATCAGGTTGGGGAGGGGCTAGTGCAAGGAGACCACAGCTGCCCAGCAGGCTaGGCTAAGGCACAGGGCGGC | + |
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Preference number: 2 (lower is better) Translates to: VEFNVQHQVGEGLVQGDHSCPAG*AKAQGG Trigger: GCCGCCCTGTGCCTTAGCCCAGCCTGCTGGGCAGCT...GTGGTCTCCTTGCACTAGCCCCTCCCCAACCTGATGTTGGACATTAAACTCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| 3UTR-3UTR CCA 90 bp | ACATCAGGTTGGGGAGGGGCTAGTGCAAGGAGACCACTGGGCAGCCTGAGGCCAGGGGTGGGACAAGGATaGAAACTTCCCCAAGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: TSGWGGASARRPLGSLRPGVGQG*KLPQAH Trigger: ATGAGCTTGGGGAAGTTTCCATCCTTGTCCCACCCC...TGGCCTCAGGCTGCCCAGTGGTCTCCTTGCACTAGCCCCTCCCCAACCTGATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| 3UTR-3UTR TCA 90 bp | AATACTGTACAGAGCCAGCAGATGGCAGCCCCTCACCAAGTCTTGCTCCCACCCCACAGTGACCCTGAGTaGCACATTGCGCAGGTGACC | + |
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Preference number: 2 (lower is better) Translates to: NTVQSQQMAAPHQVLLPPHSDPE*HIAQVT Trigger: GGTCACCTGCGCAATGTGTCACTCAGGGTCACTGTG...GGGTGGGAGCAAGACTTGGTGAGGGGCTGCCATCTGCTGGCTCTGTACAGTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| 3UTR-3UTR CCA 90 bp | AGAGCCAGCAGATGGCAGCCCCTCACCAAGTCTTGCTCCCACCCATTCCCTAGATGTCCAACATCAGGTTaGGGAGGGGCTAGTGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: RASRWQPLTKSCSHPFPRCPTSG*GGASAR Trigger: CCTTGCACTAGCCCCTCCCCAACCTGATGTTGGACA...TCTAGGGAATGGGTGGGAGCAAGACTTGGTGAGGGGCTGCCATCTGCTGGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| 3UTR-3UTR GCA 90 bp | AGCACCCTCCAACGGCTAGACTATCACATGTCACACCATGATGCCAGTGAGGAAGAGGACCAGGCAGGGTaGCCCTGTGTGGAGTTTAAT | + |
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Preference number: 2 (lower is better) Translates to: STLQRLDYHMSHHDASEEEDQAG*PCVEFN Trigger: ATTAAACTCCACACAGGGGCACCCTGCCTGGTCCTC...TTCCTCACTGGCATCATGGTGTGACATGTGATAGTCTAGCCGTTGGAGGGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| 3UTR GCA 72 bp | CCCCAAGCTCATCTGTACGCCCAAGGGTTGCTGAGCTaGCCAGCAGGCTGGGCTAAGGCACAGGGCGGCGAG | + |
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Preference number: 3 (lower is better) Translates to: PQAHLYAQGLLS*PAGWAKAQGGE Trigger: CTCGCCGCCCTGTGCCTTAGCCCAGCCTGCTGGGCAGCTCAGCAACCCTTGGGCGTACAGATGAGCTTGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| 3UTR TCA 72 bp | AACTTCCCCAAGCTCATCTGTACGCCCAAGGGTTGCTaGGCTGCCCAGCAGGCTGGGCTAAGGCACAGGGCG | + |
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Preference number: 3 (lower is better) Translates to: NFPKLICTPKGC*AAQQAGLRHRA Trigger: CGCCCTGTGCCTTAGCCCAGCCTGCTGGGCAGCTCAGCAACCCTTGGGCGTACAGATGAGCTTGGGGAAGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| 3UTR CCA 72 bp | CACCATGATGCCAGTGAGGAAGTAGCTGGCCAAGCCTaGGGCAGAGCAGTACAGAGAGAGGACCAGGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: HHDASEEVAGQA*GRAVQREDQAG Trigger: CCCTGCCTGGTCCTCTCTCTGTACTGCTCTGCCCCAGGCTTGGCCAGCTACTTCCTCACTGGCATCATGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| 3UTR TCA 72 bp | ACAGACACAGTGACCCTGAGTGACACATTGCGCAGGTaGCCCTGGCACCAGTTCTTAGCACCCTCCAACGGC | + |
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Preference number: 3 (lower is better) Translates to: TDTVTLSDTLRR*PWHQFLAPSNG Trigger: GCCGTTGGAGGGTGCTAAGAACTGGTGCCAGGGTCACCTGCGCAATGTGTCACTCAGGGTCACTGTGTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| 3UTR GCA 72 bp | TACAGAGCCAGCAGATGGCAGCCCCTCACCAAGTCTTaGTCCCACCCATTCCCTAGAGAGGTCCAGAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: YRASRWQPLTKS*SHPFPREVQKG Trigger: TCCTTTCTGGACCTCTCTAGGGAATGGGTGGGAGCAAGACTTGGTGAGGGGCTGCCATCTGCTGGCTCTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| 3UTR GCA 72 bp | TGGGGCAGAGCAGTACAGAGAGAGGACCAGGCAGGGTaGCCCTGTGTGGAGTTTAATGTCCAACATCAGGTT | + |
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Preference number: 3 (lower is better) Translates to: WGRAVQREDQAG*PCVEFNVQHQV Trigger: AACCTGATGTTGGACATTAAACTCCACACAGGGGCACCCTGCCTGGTCCTCTCTCTGTACTGCTCTGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| 3UTR CCA 72 bp | AAGCTAGAGGTTGCAATACTGTACAGAGCCAGCAGATaGCAGCCCCTCACCAAGTCTTGCTCCCACCCATTC | + |
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Preference number: 3 (lower is better) Translates to: KLEVAILYRASR*QPLTKSCSHPF Trigger: GAATGGGTGGGAGCAAGACTTGGTGAGGGGCTGCCATCTGCTGGCTCTGTACAGTATTGCAACCTCTAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR GCA 90 bp | CAGCCTGAGGCCAGGGGACCTGGAGCCGGGGTGGGACAAGGATGGAAACTTCCCGCTGCGACGGCCAGCTaGCGGCTGCCATCCTGCCGT | + |
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Preference number: 4 (lower is better) Translates to: QPEARGPGAGVGQGWKLPAATAS*RLPSCR Trigger: ACGGCAGGATGGCAGCCGGCAGCTGGCCGTCGCAGC...GGGAAGTTTCCATCCTTGTCCCACCCCGGCTCCAGGTCCCCTGGCCTCAGGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR GCA 90 bp | GCCAAGCCTGGGGCAGAGCAGTACAGAGAGAGGACCAGGCAGGGTGCCCCTGTGTCGCGGCCCAGGAACTaGTTCAGCATGGCGCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: AKPGAEQYRERTRQGAPVSRPRN*FSMALA Trigger: CGCCAGCGCCATGCTGAAGCAGTTCCTGGGCCGCGA...CACAGGGGCACCCTGCCTGGTCCTCTCTCTGTACTGCTCTGCCCCAGGCTTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR TCA 90 bp | ACATCAGGTTGGGGAGGGGCTAGTGCAAGGAGACCACTGGGCAGCCTGAGGCCATTCTCCAGGAGGTCCTaGGGGGCCTCGCTGCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: TSGWGGASARRPLGSLRPFSRRS*GASLPV Trigger: CACGGGCAGCGAGGCCCCTCAGGACCTCCTGGAGAA...TGGCCTCAGGCTGCCCAGTGGTCTCCTTGCACTAGCCCCTCCCCAACCTGATGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR TCA 90 bp | TACGCCCAAGGGTTGCTGAGCTGCCCAGCAGGCTGGGCTAAGGCACAGGGCGGCCCAGCTCCTCTCTTGTaGAGGGCAGGAAGGTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: YAQGLLSCPAGWAKAQGGPAPLL*RAGRWC Trigger: ACACCACCTTCCTGCCCTTCACAAGAGAGGAGCTGG...GCCGCCCTGTGCCTTAGCCCAGCCTGCTGGGCAGCTCAGCAACCCTTGGGCGTA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR TCA 90 bp | ACATCAGGTTGGGGAGGGGCTAGTGCAAGGAGACCACTGGGCAGCCTGAGGCCACCTTCAGCTCCAGGATaGCCGCGCGCTCCTGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: TSGWGGASARRPLGSLRPPSAPG*PRAPAH Trigger: GTGAGCAGGAGCGCGCGGTCATCCTGGAGCTGAAGG...TGGCCTCAGGCTGCCCAGTGGTCTCCTTGCACTAGCCCCTCCCCAACCTGATGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR GCA 90 bp | GAAGTAGCTGGCCAAGCCTGGGGCAGAGCAGTACAGAGAGAGGACCAGGCAGGGATGACCGCGCGCTCCTaGTCACCCAGGGGCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: EVAGQAWGRAVQREDQAGMTARS*SPRGFS Trigger: GCTGAAGCCCCTGGGTGAGCAGGAGCGCGCGGTCAT...CCCTGCCTGGTCCTCTCTCTGTACTGCTCTGCCCCAGGCTTGGCCAGCTACTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR GCA 90 bp | CAGCCTGAGGCCAGGGGACCTGGAGCCGGGGTGGGACAAGGATGGAAACTTCCCCCGCTTGGCGCACTCTaGCTCCTTCAGCTCCAGGAT | + |
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Preference number: 4 (lower is better) Translates to: QPEARGPGAGVGQGWKLPPLGAL*LLQLQD Trigger: ATCCTGGAGCTGAAGGAGGCAGAGTGCGCCAAGCGG...GGGAAGTTTCCATCCTTGTCCCACCCCGGCTCCAGGTCCCCTGGCCTCAGGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR GCA 90 bp | GCCAAGCCTGGGGCAGAGCAGTACAGAGAGAGGACCAGGCAGGGTGCCCCTGTGTGCGAGCACAGCTGGTaGATGACGTGCCCGAACTCG | + |
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Preference number: 4 (lower is better) Translates to: AKPGAEQYRERTRQGAPVCEHSW*MTCPNS Trigger: CGAGTTCGGGCACGTCATGCACCAGCTGTGCTCGCA...CACAGGGGCACCCTGCCTGGTCCTCTCTCTGTACTGCTCTGCCCCAGGCTTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CCA 90 bp | GGGGCTAGTGCAAGGAGACCACTGGGCAGCCTGAGGCCAGGGGACCTGGAGCCGAGCCACACGACCCTCTaGTACACGTCCTGTCTCATG | + |
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Preference number: 4 (lower is better) Translates to: GASARRPLGSLRPGDLEPSHTTL*YTSCLM Trigger: CATGAGACAGGACGTGTACCAGAGGGTCGTGTGGCT...CGGCTCCAGGTCCCCTGGCCTCAGGCTGCCCAGTGGTCTCCTTGCACTAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR TCA 90 bp | TGGCAGCCCCTCACCAAGTCTTGCTCCCACCCATTCCCTAGAGAGGTCCAGAAAGGCGGCGTCCCGCACTaGGTAGAGCCGCACGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: WQPLTKSCSHPFPREVQKGGVPH*VEPHVL Trigger: GAGGACGTGCGGCTCTACTCAGTGCGGGACGCCGCC...TTTCTGGACCTCTCTAGGGAATGGGTGGGAGCAAGACTTGGTGAGGGGCTGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR GCA 90 bp | CAGCCTGAGGCCAGGGGACCTGGAGCCGGGGTGGGACAAGGATGGAAACTTCCCCAGCTTGCCGTCCTCTaGCTTCTCCAGAGAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: QPEARGPGAGVGQGWKLPQLAVL*LLQRAQ Trigger: CTGAGCTCTCTGGAGAAGGCAGAGGACGGCAAGCTG...GGGAAGTTTCCATCCTTGTCCCACCCCGGCTCCAGGTCCCCTGGCCTCAGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR GCA 90 bp | GACCTGGAGCCGGGGTGGGACAAGGATGGAAACTTCCCCAAGCTCATCTGTACGAGGAGGAAGGCGTCCTaGTTGGGGTCGCGGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: DLEPGWDKDGNFPKLICTRRKAS*LGSRPR Trigger: CCTGGGCCGCGACCCCAAGCAGGACGCCTTCCTCCT...CGTACAGATGAGCTTGGGGAAGTTTCCATCCTTGTCCCACCCCGGCTCCAGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CCA 90 bp | GAAGTAGCTGGCCAAGCCTGGGGCAGAGCAGTACAGAGAGAGGACCAGGCAGGGCGCATGTCCCATGCGTaGATGCGCCCGTCGAATGGC | + |
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Preference number: 4 (lower is better) Translates to: EVAGQAWGRAVQREDQAGRMSHA*MRPSNG Trigger: GCCATTCGACGGGCGCATCCACGCATGGGACATGCG...CCCTGCCTGGTCCTCTCTCTGTACTGCTCTGCCCCAGGCTTGGCCAGCTACTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CCA 90 bp | TACGCCCAAGGGTTGCTGAGCTGCCCAGCAGGCTGGGCTAAGGCACAGGGCGGCGTGGCCGAAAGTGGCTaGCATGTTGGTACCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: YAQGLLSCPAGWAKAQGGVAESG*HVGTWC Trigger: ACACCAGGTACCAACATGCCAGCCACTTTCGGCCAC...GCCGCCCTGTGCCTTAGCCCAGCCTGCTGGGCAGCTCAGCAACCCTTGGGCGTA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR TCA 90 bp | GAAGTAGCTGGCCAAGCCTGGGGCAGAGCAGTACAGAGAGAGGACCAGGCAGGGCCTTGCAGCGACAGTTaGAGGCCTCCTCCAACAGGC | + |
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Preference number: 4 (lower is better) Translates to: EVAGQAWGRAVQREDQAGPCSDS*RPPPTG Trigger: GCCTGTTGGAGGAGGCCTTCAACTGTCGCTGCAAGG...CCCTGCCTGGTCCTCTCTCTGTACTGCTCTGCCCCAGGCTTGGCCAGCTACTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR TCA 90 bp | GAAGTAGCTGGCCAAGCCTGGGGCAGAGCAGTACAGAGAGAGGACCAGGCAGGGCCACGTGGGTCCCACTaGACATGGCAAACTCCGCCT | + |
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Preference number: 4 (lower is better) Translates to: EVAGQAWGRAVQREDQAGPRGSH*TWQTPP Trigger: AGGCGGAGTTTGCCATGTTCAGTGGGACCCACGTGG...CCCTGCCTGGTCCTCTCTCTGTACTGCTCTGCCCCAGGCTTGGCCAGCTACTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR GCA 90 bp | GCCAAGCCTGGGGCAGAGCAGTACAGAGAGAGGACCAGGCAGGGTGCCCCTGTGGGTAGTGCTGAGACATaGGCATCAGGGGCTCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: AKPGAEQYRERTRQGAPVGSAET*ASGAPS Trigger: AGAAGGAGCCCCTGATGCGCATGTCTCAGCACTACC...CACAGGGGCACCCTGCCTGGTCCTCTCTCTGTACTGCTCTGCCCCAGGCTTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CCA 90 bp | AGCCTGGGGCAGAGCAGTACAGAGAGAGGACCAGGCAGGGTGCCCCTGTGTGGATGTCAGCCTCTGTGCTaGCTGCACGGATGTCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: SLGQSSTERGPGRVPLCGCQPLC*LHGCPC Trigger: GCAAGGACATCCGTGCAGCCAGCACAGAGGCTGACA...TCCACACAGGGGCACCCTGCCTGGTCCTCTCTCTGTACTGCTCTGCCCCAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CCA 90 bp | CAAGCCTGGGGCAGAGCAGTACAGAGAGAGGACCAGGCAGGGTGCCCCTGTGTGAAGTCCCGCTCCACGTaGGTCCCACTGAACATGGCA | + |
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Preference number: 4 (lower is better) Translates to: QAWGRAVQREDQAGCPCVKSRST*VPLNMA Trigger: TGCCATGTTCAGTGGGACCCACGTGGAGCGGGACTT...CACACAGGGGCACCCTGCCTGGTCCTCTCTCTGTACTGCTCTGCCCCAGGCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CCA 90 bp | CAGCCTGAGGCCAGGGGACCTGGAGCCGGGGTGGGACAAGGATGGAAACTTCCCAAGTGGCTGGCATGTTaGTACCTGGTGTGGCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: QPEARGPGAGVGQGWKLPKWLAC*YLVWLA Trigger: TGCCAGCCACACCAGGTACCAACATGCCAGCCACTT...GGGAAGTTTCCATCCTTGTCCCACCCCGGCTCCAGGTCCCCTGGCCTCAGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CCA 90 bp | CCAGCAGATGGCAGCCCCTCACCAAGTCTTGCTCCCACCCATTCCCTAGAGAGGGTCCTCAGAGCCCCCTaGCCTCAGGATGCTGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: PADGSPSPSLAPTHSLERVLRAP*PQDAGP Trigger: AGGACCAGCATCCTGAGGCCAGGGGGCTCTGAGGAC...CCTCTCTAGGGAATGGGTGGGAGCAAGACTTGGTGAGGGGCTGCCATCTGCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CCA 90 bp | CTTCCCCAAGCTCATCTGTACGCCCAAGGGTTGCTGAGCTGCCCAGCAGGCTGGACCCCGAGGATCTCTTaGCAGAGCCGGGCATATTCC | + |
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Preference number: 4 (lower is better) Translates to: LPQAHLYAQGLLSCPAGWTPRIS*QSRAYS Trigger: GGAATATGCCCGGCTCTGCCAAGAGATCCTCGGGGT...CCAGCCTGCTGGGCAGCTCAGCAACCCTTGGGCGTACAGATGAGCTTGGGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR GCA 90 bp | GCTAGAGGTTGCAATACTGTACAGAGCCAGCAGATGGCAGCCCCTCACCAAGTCGGTGGAGGCTGGGGATaGTGCATCCACCACGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: ARGCNTVQSQQMAAPHQVGGGWG*CIHHVP Trigger: GGGGACGTGGTGGATGCAGCATCCCCAGCCTCCACC...GACTTGGTGAGGGGCTGCCATCTGCTGGCTCTGTACAGTATTGCAACCTCTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR GCA 90 bp | AGCAGATGGCAGCCCCTCACCAAGTCTTGCTCCCACCCATTCCCTAGAGAGGTCCCACCTGCAGACCCTTaGTCAGGAGGAAGGCGTCCT | + |
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Preference number: 4 (lower is better) Translates to: SRWQPLTKSCSHPFPREVPPADP*SGGRRP Trigger: AGGACGCCTTCCTCCTGAGCAAGGGTCTGCAGGTGG...GACCTCTCTAGGGAATGGGTGGGAGCAAGACTTGGTGAGGGGCTGCCATCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CCA 90 bp | ACATCAGGTTGGGGAGGGGCTAGTGCAAGGAGACCACTGGGCAGCCTGAGGCCACTAGGTGGCCGAAAGTaGCTGGCATGTTGGTACCTG | + |
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Preference number: 4 (lower is better) Translates to: TSGWGGASARRPLGSLRPLGGRK*LACWYL Trigger: CAGGTACCAACATGCCAGCCACTTTCGGCCACCTAG...TGGCCTCAGGCTGCCCAGTGGTCTCCTTGCACTAGCCCCTCCCCAACCTGATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CCA 90 bp | CCAAGTCTTGCTCCCACCCATTCCCTAGAGAGGTCCAGAAAGGAGCTGGTAGCTGGAAGGCGTCCTGCTTaGGGTCGCGGCCCAGGAACT | + |
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Preference number: 4 (lower is better) Translates to: PSLAPTHSLERSRKELVAGRRPA*GRGPGT Trigger: AGTTCCTGGGCCGCGACCCCAAGCAGGACGCCTTCC...AGCTACCAGCTCCTTTCTGGACCTCTCTAGGGAATGGGTGGGAGCAAGACTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| 3UTR CAA 72 bp | TGGAAACTTCCCCAAGCTCATCTGTACGCCCAAGGGTaGCTGAGCTGCCCAGCAGGCTGGGCTAAGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: WKLPQAHLYAQG*LSCPAGWAKAQ Trigger: CTGTGCCTTAGCCCAGCCTGCTGGGCAGCTCAGCAACCCTTGGGCGTACAGATGAGCTTGGGGAAGTTTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR TCA 90 bp | GGCAGCCCCTCACCAAGTCTTGCTCCCACCCATTCCCTAGAGAGGTCCAGAAAGCAGGTGTGGGCTTCGTaGAATTGGCCACCATGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GSPSPSLAPTHSLERSRKQVWAS*NWPPWL Trigger: CAGCCATGGTGGCCAATTTCACGAAGCCCACACCTG...CTTTCTGGACCTCTCTAGGGAATGGGTGGGAGCAAGACTTGGTGAGGGGCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR GCA 90 bp | TGGCAGCCCCTCACCAAGTCTTGCTCCCACCCATTCCCTAGAGAGGTCCAGAAAGTAGCGCATGTCCCATaGGTGGATGCGCCCGTCGAA | + |
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Preference number: 4 (lower is better) Translates to: WQPLTKSCSHPFPREVQKVAHVP*VDAPVE Trigger: TTCGACGGGCGCATCCACGCATGGGACATGCGCTAC...TTTCTGGACCTCTCTAGGGAATGGGTGGGAGCAAGACTTGGTGAGGGGCTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR GCA 90 bp | AGCACCCTCCAACGGCTAGACTATCACATGTCACACCATGATGCCAGTGAGGAAACGCAGGCGCCTCGCTaGCCTCCACCTGCAGACCCT | + |
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Preference number: 4 (lower is better) Translates to: STLQRLDYHMSHHDASEETQAPR*PPPADP Trigger: AGGGTCTGCAGGTGGAGGGCAGCGAGGCGCCTGCGT...TTCCTCACTGGCATCATGGTGTGACATGTGATAGTCTAGCCGTTGGAGGGTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CCA 90 bp | TGGCAGCCCCTCACCAAGTCTTGCTCCCACCCATTCCCTAGAGAGGTCCAGAAAGGTACCTGGTGTGGCTaGCACCCCGAGGATCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: WQPLTKSCSHPFPREVQKGTWCG*HPEDLL Trigger: CAAGAGATCCTCGGGGTGCCAGCCACACCAGGTACC...TTTCTGGACCTCTCTAGGGAATGGGTGGGAGCAAGACTTGGTGAGGGGCTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR GCA 90 bp | GACCTGGAGCCGGGGTGGGACAAGGATGGAAACTTCCCCAAGCTCATCTGTACGTCTTGTCAGCCTCTGTaGTGGCTGCACGGATGTCCT | + |
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Preference number: 4 (lower is better) Translates to: DLEPGWDKDGNFPKLICTSCQPL*WLHGCP Trigger: AGGACATCCGTGCAGCCAGCACAGAGGCTGACAAGA...CGTACAGATGAGCTTGGGGAAGTTTCCATCCTTGTCCCACCCCGGCTCCAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR GCA 90 bp | CCTGGAGCCGGGGTGGGACAAGGATGGAAACTTCCCCAAGCTCATCTGTACGCCCAGGCCAAAGCAGGCTaGATGGCCATATTTCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: PGAGVGQGWKLPQAHLYAQAKAG*MAIFPF Trigger: GAAGGGAAATATGGCCATGCAGCCTGCTTTGGCCTG...GGCGTACAGATGAGCTTGGGGAAGTTTCCATCCTTGTCCCACCCCGGCTCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CCA 90 bp | AATACTGTACAGAGCCAGCAGATGGCAGCCCCTCACCAAGTCTTGCTCCCACCCATTCACGGTGGAGGCTaGGGATGCTGCATCCACCAC | + |
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Preference number: 4 (lower is better) Translates to: NTVQSQQMAAPHQVLLPPIHGGG*GCCIHH Trigger: GTGGTGGATGCAGCATCCCCAGCCTCCACCGTGAAT...GGGTGGGAGCAAGACTTGGTGAGGGGCTGCCATCTGCTGGCTCTGTACAGTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CCA 90 bp | CATGATGCCAGTGAGGAAGTAGCTGGCCAAGCCTGGGGCAGAGCAGTACAGAGATGTTGGTACCTGGTGTaGCTGGCACCCCGAGGATCT | + |
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Preference number: 4 (lower is better) Translates to: HDASEEVAGQAWGRAVQRCWYLV*LAPRGS Trigger: AGATCCTCGGGGTGCCAGCCACACCAGGTACCAACA...TCTCTGTACTGCTCTGCCCCAGGCTTGGCCAGCTACTTCCTCACTGGCATCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR TCA 90 bp | GGACAAGGATGGAAACTTCCCCAAGCTCATCTGTACGCCCAAGGGTTGCTGAGCTCTGCACTGTGTAGGTaGCCTCCACGTCAGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: GQGWKLPQAHLYAQGLLSSALCR*PPRQPV Trigger: CACTGGCTGACGTGGAGGTCACCTACACAGTGCAGA...GCTCAGCAACCCTTGGGCGTACAGATGAGCTTGGGGAAGTTTCCATCCTTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR TCA 90 bp | TCCCTAGAGAGGTCCAGAAAGGAGCTGGTAGCTGAGAACAGACACAGTGACCCTAGCACAGCTGGTGCATaGCGTGCCCGAACTCGTGGA | + |
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Preference number: 4 (lower is better) Translates to: SLERSRKELVAENRHSDPSTAGA*RARTRG Trigger: TCCACGAGTTCGGGCACGTCATGCACCAGCTGTGCT...AGGGTCACTGTGTCTGTTCTCAGCTACCAGCTCCTTTCTGGACCTCTCTAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR GCA 90 bp | GTGGAGTTTAATGTCCAACATCAGGTTGGGGAGGGGCTAGTGCAAGGAGACCACAGCCTCTGTGCTGGCTaGACGGATGTCCTTGCACGG | + |
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Preference number: 4 (lower is better) Translates to: VEFNVQHQVGEGLVQGDHSLCAG*TDVLAR Trigger: CCGTGCAAGGACATCCGTGCAGCCAGCACAGAGGCT...GTGGTCTCCTTGCACTAGCCCCTCCCCAACCTGATGTTGGACATTAAACTCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CCA 90 bp | AATACTGTACAGAGCCAGCAGATGGCAGCCCCTCACCAAGTCTTGCTCCCACCCGGACCTGATCCACCTTaGCAAGCACAATCTGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: NTVQSQQMAAPHQVLLPPGPDPP*QAQSAA Trigger: TGCGGCAGATTGTGCTTGCCAAGGTGGATCAGGTCC...GGGTGGGAGCAAGACTTGGTGAGGGGCTGCCATCTGCTGGCTCTGTACAGTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR TCA 90 bp | AGAGCCAGCAGATGGCAGCCCCTCACCAAGTCTTGCTCCCACCCATTCCCTAGATTCTCTTGTGTGTCCTaGGGTAAGTGGAGGCCGTTT | + |
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Preference number: 4 (lower is better) Translates to: RASRWQPLTKSCSHPFPRFSCVS*GKWRPF Trigger: AAACGGCCTCCACTTACCTCAGGACACACAAGAGAA...TCTAGGGAATGGGTGGGAGCAAGACTTGGTGAGGGGCTGCCATCTGCTGGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR TCA 90 bp | GACCTGGAGCCGGGGTGGGACAAGGATGGAAACTTCCCCAAGCTCATCTGTACGAAGGTGGCTACTGTTTaGCTGGTCTTGGCCATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DLEPGWDKDGNFPKLICTKVATV*LVLAMF Trigger: GAACATGGCCAAGACCAGTCAAACAGTAGCCACCTT...CGTACAGATGAGCTTGGGGAAGTTTCCATCCTTGTCCCACCCCGGCTCCAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR GCA 90 bp | CCCTCACCAAGTCTTGCTCCCACCCATTCCCTAGAGAGGTCCAGAAAGGAGCTGCTCCACGTCAGCCAGTaGCTTCAGTGTGCTCTCATA | + |
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Preference number: 4 (lower is better) Translates to: PSPSLAPTHSLERSRKELLHVSQ*LQCALI Trigger: TATGAGAGCACACTGAAGGCACTGGCTGACGTGGAG...CAGCTCCTTTCTGGACCTCTCTAGGGAATGGGTGGGAGCAAGACTTGGTGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CCA 90 bp | CCCTCACCAAGTCTTGCTCCCACCCATTCCCTAGAGAGGTCCAGAAAGGAGCTGGAAGATGATTCACGGTaGAGGCTGGGGATGCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: PSPSLAPTHSLERSRKELEDDSR*RLGMLH Trigger: ATGCAGCATCCCCAGCCTCCACCGTGAATCATCTTC...CAGCTCCTTTCTGGACCTCTCTAGGGAATGGGTGGGAGCAAGACTTGGTGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CCA 90 bp | CCCTCACCAAGTCTTGCTCCCACCCATTCCCTAGAGAGGTCCAGAAAGGAGCTGCCAAAGCAGGCTGCATaGCCATATTTCCCTTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: PSPSLAPTHSLERSRKELPKQAA*PYFPSL Trigger: CAGGGAAGGGAAATATGGCCATGCAGCCTGCTTTGG...CAGCTCCTTTCTGGACCTCTCTAGGGAATGGGTGGGAGCAAGACTTGGTGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CCA 90 bp | GACCTGGAGCCGGGGTGGGACAAGGATGGAAACTTCCCCAAGCTCATCTGTACGTGCTTGAAGCGTGTGTaGAACATGTCCATCGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: DLEPGWDKDGNFPKLICTCLKRV*NMSIEY Trigger: GTACTCGATGGACATGTTCCACACACGCTTCAAGCA...CGTACAGATGAGCTTGGGGAAGTTTCCATCCTTGTCCCACCCCGGCTCCAGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR TCA 90 bp | AGCACCCTCCAACGGCTAGACTATCACATGTCACACCATGATGCCAGTGAGGAATGTGTGTGCAGGACCTaGTCCACCTTGGCAAGCACA | + |
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Preference number: 4 (lower is better) Translates to: STLQRLDYHMSHHDASEECVCRT*STLAST Trigger: TGTGCTTGCCAAGGTGGATCAGGTCCTGCACACACA...TTCCTCACTGGCATCATGGTGTGACATGTGATAGTCTAGCCGTTGGAGGGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR TCA 90 bp | TCCCTAGAGAGGTCCAGAAAGGAGCTGGTAGCTGAGAACAGACACAGTGACCCTGCACACCCTCTTGCTTaGAGCGTGTGTGGAACATGT | + |
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Preference number: 4 (lower is better) Translates to: SLERSRKELVAENRHSDPAHPLA*SVCGTC Trigger: ACATGTTCCACACACGCTTCAAGCAAGAGGGTGTGC...AGGGTCACTGTGTCTGTTCTCAGCTACCAGCTCCTTTCTGGACCTCTCTAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR GCA 90 bp | CAACGGCTAGACTATCACATGTCACACCATGATGCCAGTGAGGAAGTAGCTGGCCCACGTGTGACCACCTaGATGGGGAAGTACTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QRLDYHMSHHDASEEVAGPRVTT*MGKYSF Trigger: GAAGGAGTACTTCCCCATGCAGGTGGTCACACGTGG...GCCAGCTACTTCCTCACTGGCATCATGGTGTGACATGTGATAGTCTAGCCGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR GCA 90 bp | TCCCTAGAGAGGTCCAGAAAGGAGCTGGTAGCTGAGAACAGACACAGTGACCCTTTGGCAAGCACAATCTaGCGCAGGTTGAAGAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: SLERSRKELVAENRHSDPLASTI*RRLKRP Trigger: AGGTCTCTTCAACCTGCGGCAGATTGTGCTTGCCAA...AGGGTCACTGTGTCTGTTCTCAGCTACCAGCTCCTTTCTGGACCTCTCTAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CCA 90 bp | TCCCTAGAGAGGTCCAGAAAGGAGCTGGTAGCTGAGAACAGACACAGTGACCCTCTAGCTCCTTCAGAATaGCACAGTTCTCCTCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: SLERSRKELVAENRHSDPLAPSE*HSSPPC Trigger: GCAAGGAGGAGAACTGTGCCATTCTGAAGGAGCTAG...AGGGTCACTGTGTCTGTTCTCAGCTACCAGCTCCTTTCTGGACCTCTCTAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CCA 90 bp | GGACAAGGATGGAAACTTCCCCAAGCTCATCTGTACGCCCAAGGGTTGCTGAGCCTGTTTGACTGGTCTTaGCCATGTTCATCTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GQGWKLPQAHLYAQGLLSLFDWS*PCSSPG Trigger: TCCTGGAGATGAACATGGCCAAGACCAGTCAAACAG...GCTCAGCAACCCTTGGGCGTACAGATGAGCTTGGGGAAGTTTCCATCCTTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CCA 90 bp | TGGCAGCCCCTCACCAAGTCTTGCTCCCACCCATTCCCTAGAGAGGTCCAGAAATGGCTACTGTTTGACTaGTCTTGGCCATGTTCATCT | + |
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Preference number: 4 (lower is better) Translates to: WQPLTKSCSHPFPREVQKWLLFD*SWPCSS Trigger: AGATGAACATGGCCAAGACCAGTCAAACAGTAGCCA...TTTCTGGACCTCTCTAGGGAATGGGTGGGAGCAAGACTTGGTGAGGGGCTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS GCA 90 bp | TGCGTGGATGCGCCCGTCGAATGGCAGTCCCCGCTTGGCGCACTCTaGCTCCTTCAGCTCCAGGATGACCGCGCGCTCCTGCTCACCCAG | + |
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Preference number: 5 (lower is better) Translates to: CVDAPVEWQSPLGAL*LLQLQDDRALLLTQ Trigger: CTGGGTGAGCAGGAGCGCGCGGTCATCCTGGAGCTGAAGGAGGCAGAGTGCGCCAAGCGGGGACTGCCATTCGACGGGCGCATCCACGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS GCA 90 bp | TCGCTGCCCTCCACCTGCAGACCCTTGCTCAGGAGGAAGGCGTCCTaGTTGGGGTCGCGGCCCAGGAACTGCTTCAGCATGGCGCTGGCG | + |
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Preference number: 5 (lower is better) Translates to: SLPSTCRPLLRRKAS*LGSRPRNCFSMALA Trigger: CGCCAGCGCCATGCTGAAGCAGTTCCTGGGCCGCGACCCCAAGCAGGACGCCTTCCTCCTGAGCAAGGGTCTGCAGGTGGAGGGCAGCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CCA 90 bp | CGTCCTGCTTGGGGTCGCGGCCCAGGAACTGCTTCAGCATGGCGCTaGCGTCCTCAGAGCCCCCTGGCCTCAGGATGCTGGTCCTGTAGT | + |
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Preference number: 5 (lower is better) Translates to: RPAWGRGPGTASAWR*RPQSPLASGCWSCS Trigger: ACTACAGGACCAGCATCCTGAGGCCAGGGGGCTCTGAGGACGCCAGCGCCATGCTGAAGCAGTTCCTGGGCCGCGACCCCAAGCAGGACG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CCA 90 bp | TGCCCTCCACCTGCAGACCCTTGCTCAGGAGGAAGGCGTCCTGCTTaGGGTCGCGGCCCAGGAACTGCTTCAGCATGGCGCTGGCGTCCT | + |
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Preference number: 5 (lower is better) Translates to: CPPPADPCSGGRRPA*GRGPGTASAWRWRP Trigger: AGGACGCCAGCGCCATGCTGAAGCAGTTCCTGGGCCGCGACCCCAAGCAGGACGCCTTCCTCCTGAGCAAGGGTCTGCAGGTGGAGGGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS TCA 90 bp | ATGGCAGTCCCCGCTTGGCGCACTCTGCCTCCTTCAGCTCCAGGATaGCCGCGCGCTCCTGCTCACCCAGGGGCTTCAGCTTCTGTGCCA | + |
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Preference number: 5 (lower is better) Translates to: MAVPAWRTLPPSAPG*PRAPAHPGASASVP Trigger: TGGCACAGAAGCTGAAGCCCCTGGGTGAGCAGGAGCGCGCGGTCATCCTGGAGCTGAAGGAGGCAGAGTGCGCCAAGCGGGGACTGCCAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS TCA 90 bp | GAGGTAGAACTTGCCGATCTCCTCTCCAGAGGCGGCGTCCCGCACTaGGTAGAGCCGCACGTCCTCGTGCCAGGCAGCGGCACCTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: EVELADLLSRGGVPH*VEPHVLVPGSGTFL Trigger: GAGGAAGGTGCCGCTGCCTGGCACGAGGACGTGCGGCTCTACTCAGTGCGGGACGCCGCCTCTGGAGAGGAGATCGGCAAGTTCTACCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CAA 90 bp | CTTCCCCAAGCTCATCTGTACGCCCAAGGGTTGCTGAGCTGCCCAGCAGGCTGGAGGAAGGCGTCCTGCTaGGGGTCGCGGCCCAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: LPQAHLYAQGLLSCPAGWRKASC*GSRPRN Trigger: GTTCCTGGGCCGCGACCCCAAGCAGGACGCCTTCCT...CCAGCCTGCTGGGCAGCTCAGCAACCCTTGGGCGTACAGATGAGCTTGGGGAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS TCA 90 bp | CCTCATCATGCTGCAGCAGGGATGGCGCGTCAGGTGTGGGCTTCGTaGAATTGGCCACCATGGCTGCGACGGCCAGCTGCCGGCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PHHAAAGMARQVWAS*NWPPWLRRPAAGCH Trigger: ATGGCAGCCGGCAGCTGGCCGTCGCAGCCATGGTGGCCAATTTCACGAAGCCCACACCTGACGCGCCATCCCTGCTGCAGCATGATGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CCA 90 bp | GCCCAGGAACTGCTTCAGCATGGCGCTGGCGTCCTCAGAGCCCCCTaGCCTCAGGATGCTGGTCCTGTAGTCCATGCCAACCTTGGGGCT | + |
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Preference number: 5 (lower is better) Translates to: AQELLQHGAGVLRAP*PQDAGPVVHANLGA Trigger: AGCCCCAAGGTTGGCATGGACTACAGGACCAGCATCCTGAGGCCAGGGGGCTCTGAGGACGCCAGCGCCATGCTGAAGCAGTTCCTGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CCA 90 bp | TTCTCCAGCATCTGGGACGGCGCCTCCACAAAGTCCCGCTCCACGTaGGTCCCACTGAACATGGCAAACTCCGCCTGCGAGCACAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FSSIWDGASTKSRST*VPLNMANSACEHSW Trigger: CCAGCTGTGCTCGCAGGCGGAGTTTGCCATGTTCAGTGGGACCCACGTGGAGCGGGACTTTGTGGAGGCGCCGTCCCAGATGCTGGAGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CAA 90 bp | CAGCCTGAGGCCAGGGGACCTGGAGCCGGGGTGGGACAAGGATGGAAACTTCCCTCCTTGCAGCGACAGTaGAAGGCCTCCTCCAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: QPEARGPGAGVGQGWKLPSLQRQ*KASSNR Trigger: CCTGTTGGAGGAGGCCTTCAACTGTCGCTGCAAGGA...GGGAAGTTTCCATCCTTGTCCCACCCCGGCTCCAGGTCCCCTGGCCTCAGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS GCA 90 bp | TCTCCTCCACCTGGTTCATGTAGTAGCGCATGTCCCATGCGTGGATaGGCCCGTCGAATGGCAGTCCCCGCTTGGCGCACTCTGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPPPGSCSSACPMRG*ARRMAVPAWRTLPP Trigger: AGGAGGCAGAGTGCGCCAAGCGGGGACTGCCATTCGACGGGCGCATCCACGCATGGGACATGCGCTACTACATGAACCAGGTGGAGGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CCA 90 bp | GCTGGCATGTTGGTACCTGGTGTGGCTGGCACCCCGAGGATCTCTTaGCAGAGCCGGGCATATTCCTCAGCCGGGTCTGCGTCTGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AGMLVPGVAGTPRIS*QSRAYSSAGSASVC Trigger: ACAGACAGACGCAGACCCGGCTGAGGAATATGCCCGGCTCTGCCAAGAGATCCTCGGGGTGCCAGCCACACCAGGTACCAACATGCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CAA 90 bp | ACATCAGGTTGGGGAGGGGCTAGTGCAAGGAGACCACTGGGCAGCCTGAGGCCAAGGGTGACCTTCAGCTaGCCGTCCTCTGCCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TSGWGGASARRPLGSLRPRVTFS*PSSAFS Trigger: GGAGAAGGCAGAGGACGGCAAGCTGAAGGTCACCCT...TGGCCTCAGGCTGCCCAGTGGTCTCCTTGCACTAGCCCCTCCCCAACCTGATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CAA 90 bp | TACGCCCAAGGGTTGCTGAGCTGCCCAGCAGGCTGGGCTAAGGCACAGGGCGGCAGCACACCCTCTTGCTaGAAGCGTGTGTGGAACATG | + |
|
Preference number: 5 (lower is better) Translates to: YAQGLLSCPAGWAKAQGGSTPSC*KRVWNM Trigger: CATGTTCCACACACGCTTCAAGCAAGAGGGTGTGCT...GCCGCCCTGTGCCTTAGCCCAGCCTGCTGGGCAGCTCAGCAACCCTTGGGCGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS GCA 90 bp | ATAGCGAGTCTCCTCCACCTGGTTCATGTAGTAGCGCATGTCCCATaGGTGGATGCGCCCGTCGAATGGCAGTCCCCGCTTGGCGCACTC | + |
|
Preference number: 5 (lower is better) Translates to: IASLLHLVHVVAHVP*VDAPVEWQSPLGAL Trigger: GAGTGCGCCAAGCGGGGACTGCCATTCGACGGGCGCATCCACGCATGGGACATGCGCTACTACATGAACCAGGTGGAGGAGACTCGCTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS GCA 90 bp | CCCGAGGATCTCTTGGCAGAGCCGGGCATATTCCTCAGCCGGGTCTaGGTCTGTCTGTGTGTGCAGGACCTGATCCACCTTGGCAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PEDLLAEPGIFLSRV*VCLCVQDLIHLGKH Trigger: GTGCTTGCCAAGGTGGATCAGGTCCTGCACACACAGACAGACGCAGACCCGGCTGAGGAATATGCCCGGCTCTGCCAAGAGATCCTCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CCA 90 bp | GTTCATGTAGTAGCGCATGTCCCATGCGTGGATGCGCCCGTCGAATaGCAGTCCCCGCTTGGCGCACTCTGCCTCCTTCAGCTCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VHVVAHVPCVDAPVE*QSPLGALCLLQLQD Trigger: ATCCTGGAGCTGAAGGAGGCAGAGTGCGCCAAGCGGGGACTGCCATTCGACGGGCGCATCCACGCATGGGACATGCGCTACTACATGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS TCA 90 bp | GTGGTTAGAGCCCTGATCTGCTGTGCGCTCAGATCCCAGCGAAGATaGTTCACGGTGGAGGCTGGGGATGCTGCATCCACCACGTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VVRALICCALRSQRR*FTVEAGDAASTTSP Trigger: TGGGGACGTGGTGGATGCAGCATCCCCAGCCTCCACCGTGAATCATCTTCGCTGGGATCTGAGCGCACAGCAGATCAGGGCTCTAACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS GCA 90 bp | GCCGTTTCTCCGGCCCAGCTTGATGAGCCGCTCCAGGTAGCGAGCTaGTTCAGGCTTCAGGGAATCTTTCGGGGTTTTCTCCTGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AVSPAQLDEPLQVAS*FRLQGIFRGFLLQP Trigger: TGGCTGCAGGAGAAAACCCCGAAAGATTCCCTGAAGCCTGAAGCAGCTCGCTACCTGGAGCGGCTCATCAAGCTGGGCCGGAGAAACGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CAA 90 bp | GCCAAGCCTGGGGCAGAGCAGTACAGAGAGAGGACCAGGCAGGGTGCCCCTGTGTCGTTGAGGTTCTTGTaGAAGTCGATGCACAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AKPGAEQYRERTRQGAPVSLRFL*KSMHSR Trigger: CCTGCTGTGCATCGACTTCAACAAGAACCTCAACGA...CACAGGGGCACCCTGCCTGGTCCTCTCTCTGTACTGCTCTGCCCCAGGCTTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CAA 90 bp | AATACTGTACAGAGCCAGCAGATGGCAGCCCCTCACCAAGTCTTGCTCCCACCCTCCACCTGCAGACCCTaGCTCAGGAGGAAGGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NTVQSQQMAAPHQVLLPPSTCRP*LRRKAS Trigger: GGACGCCTTCCTCCTGAGCAAGGGTCTGCAGGTGGA...GGGTGGGAGCAAGACTTGGTGAGGGGCTGCCATCTGCTGGCTCTGTACAGTATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS GCA 90 bp | CCGAGAGCTTCTTGTCAGCCTCTGTGCTGGCTGCACGGATGTCCTTaGACGGGGACACGTGTTGGGGGAAGTCGAGAATGTTCCTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PRASCQPLCWLHGCP*TGTRVGGSRECSSA Trigger: TGCAGAGGAACATTCTCGACTTCCCCCAACACGTGTCCCCGTGCAAGGACATCCGTGCAGCCAGCACAGAGGCTGACAAGAAGCTCTCGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS GCA 90 bp | GAAGTAGTGAGGGTACTTGAGGGTGACCTTCAGCTTGCCGTCCTCTaGCTTCTCCAGAGAGCTCAGAAAGTCCTCCGGGAGCCCACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EVVRVLEGDLQLAVL*LLQRAQKVLREPTQ Trigger: CTGGGTGGGCTCCCGGAGGACTTTCTGAGCTCTCTGGAGAAGGCAGAGGACGGCAAGCTGAAGGTCACCCTCAAGTACCCTCACTACTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CAA 90 bp | CCAGCAGATGGCAGCCCCTCACCAAGTCTTGCTCCCACCCATTCCCTAGAGAGGAACTCCGAGAGCTTCTaGTCAGCCTCTGTGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PADGSPSPSLAPTHSLERNSESF*SASVLA Trigger: AGCCAGCACAGAGGCTGACAAGAAGCTCTCGGAGTT...CCTCTCTAGGGAATGGGTGGGAGCAAGACTTGGTGAGGGGCTGCCATCTGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS TCA 90 bp | CTAGCTCCTTCAGAATGGCACAGTTCTCCTCCTTGCAGCGACAGTTaGAGGCCTCCTCCAACAGGCGTCGTGTCTCCGGCACATGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: LAPSEWHSSPPCSDS*RPPPTGVVSPAHGT Trigger: AGTGCCATGTGCCGGAGACACGACGCCTGTTGGAGGAGGCCTTCAACTGTCGCTGCAAGGAGGAGAACTGTGCCATTCTGAAGGAGCTAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS GCA 90 bp | CTCTACATCAAACTCCGAGAGCTTCTTGTCAGCCTCTGTGCTGGCTaGACGGATGTCCTTGCACGGGGACACGTGTTGGGGGAAGTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: LYIKLRELLVSLCAG*TDVLARGHVLGEVE Trigger: CTCGACTTCCCCCAACACGTGTCCCCGTGCAAGGACATCCGTGCAGCCAGCACAGAGGCTGACAAGAAGCTCTCGGAGTTTGATGTAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CCA 90 bp | TCATCTCCAGGACGTAGTCCGCGTGTGTGTGGAACCCCAACAGGCTaGACTTCTGTGCTCGCAGGGACACTAGCTCCTTCAGAATGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SSPGRSPRVCGTPTG*TSVLAGTLAPSEWH Trigger: GTGCCATTCTGAAGGAGCTAGTGTCCCTGCGAGCACAGAAGTCCAGCCTGTTGGGGTTCCACACACACGCGGACTACGTCCTGGAGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
||
| CDS-3UTR CAA 90 bp | AGGACCAGGCAGGGTGCCCCTGTGTGGAGTTTAATGTCCAACATCAGGTTGGGGGCACAGTTCTCCTCCTaGCAGCGACAGTTGAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RTRQGAPVWSLMSNIRLGAQFSS*QRQLKA Trigger: GGCCTTCAACTGTCGCTGCAAGGAGGAGAACTGTGC...CCCCAACCTGATGTTGGACATTAAACTCCACACAGGGGCACCCTGCCTGGTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
||
| CDS-3UTR CAA 90 bp | AGGACCAGGCAGGGTGCCCCTGTGTGGAGTTTAATGTCCAACATCAGGTTGGGGTTGGCCTGGCGAGACTaGATGAGCTTCTCCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RTRQGAPVWSLMSNIRLGLAWRD*MSFSRR Trigger: CCTCCTGGAGAAGCTCATCAAGTCTCGCCAGGCCAA...CCCCAACCTGATGTTGGACATTAAACTCCACACAGGGGCACCCTGCCTGGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
||
| CDS TCA 90 bp | GCATATTCCTCAGCCGGGTCTGCGTCTGTCTGTGTGTGCAGGACCTaGTCCACCTTGGCAAGCACAATCTGCCGCAGGTTGAAGAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: AYSSAGSASVCVCRT*STLASTICRRLKRP Trigger: AGGTCTCTTCAACCTGCGGCAGATTGTGCTTGCCAAGGTGGATCAGGTCCTGCACACACAGACAGACGCAGACCCGGCTGAGGAATATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS GCA 90 bp | TGCTCATCTCTACATCAAACTCCGAGAGCTTCTTGTCAGCCTCTGTaGTGGCTGCACGGATGTCCTTGCACGGGGACACGTGTTGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CSSLHQTPRASCQPL*WLHGCPCTGTRVGG Trigger: TCCCCCAACACGTGTCCCCGTGCAAGGACATCCGTGCAGCCAGCACAGAGGCTGACAAGAAGCTCTCGGAGTTTGATGTAGAGATGAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
||
| CDS-3UTR CAA 90 bp | GCTAGAGGTTGCAATACTGTACAGAGCCAGCAGATGGCAGCCCCTCACCAAGTCCGGTCGTACACACACTaGGTCTGCTCGATGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ARGCNTVQSQQMAAPHQVRSYTH*VCSMSC Trigger: GCAGCTCATCGAGCAGACCAAGTGTGTGTACGACCG...GACTTGGTGAGGGGCTGCCATCTGCTGGCTCTGTACAGTATTGCAACCTCTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
||
| CDS-3UTR CAA 90 bp | TCCCTAGAGAGGTCCAGAAAGGAGCTGGTAGCTGAGAACAGACACAGTGACCCTGTGGGCTTCGTGAAATaGGCCACCATGGCTGCGACG | + |
|
Preference number: 5 (lower is better) Translates to: SLERSRKELVAENRHSDPVGFVK*ATMAAT Trigger: CGTCGCAGCCATGGTGGCCAATTTCACGAAGCCCAC...AGGGTCACTGTGTCTGTTCTCAGCTACCAGCTCCTTTCTGGACCTCTCTAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
||
| CDS TCA 90 bp | GCCAGTGCCTTCAGTGTGCTCTCATACGACACATCCTCGAAGTTCTaGGCACCCACTCGGTCGTACACACACTTGGTCTGCTCGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ASAFSVLSYDTSSKF*APTRSYTHLVCSMS Trigger: GCTCATCGAGCAGACCAAGTGTGTGTACGACCGAGTGGGTGCTCAGAACTTCGAGGATGTGTCGTATGAGAGCACACTGAAGGCACTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
||
| CDS CCA 90 bp | TCATCTCTACATCAAACTCCGAGAGCTTCTTGTCAGCCTCTGTGCTaGCTGCACGGATGTCCTTGCACGGGGACACGTGTTGGGGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSLHQTPRASCQPLC*LHGCPCTGTRVGGS Trigger: ACTTCCCCCAACACGTGTCCCCGTGCAAGGACATCCGTGCAGCCAGCACAGAGGCTGACAAGAAGCTCTCGGAGTTTGATGTAGAGATGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
||
| CDS-3UTR CAA 90 bp | AGCACCCTCCAACGGCTAGACTATCACATGTCACACCATGATGCCAGTGAGGAACACCCCGAGGATCTCTaGGCAGAGCCGGGCATATTC | + |
|
Preference number: 5 (lower is better) Translates to: STLQRLDYHMSHHDASEEHPEDL*AEPGIF Trigger: GAATATGCCCGGCTCTGCCAAGAGATCCTCGGGGTG...TTCCTCACTGGCATCATGGTGTGACATGTGATAGTCTAGCCGTTGGAGGGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
||
| CDS-3UTR CAA 90 bp | GTGGAGTTTAATGTCCAACATCAGGTTGGGGAGGGGCTAGTGCAAGGAGACCACAAAGTGGCTGGCATGTaGGTACCTGGTGTGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VEFNVQHQVGEGLVQGDHKVAGM*VPGVAG Trigger: GCCAGCCACACCAGGTACCAACATGCCAGCCACTTT...GTGGTCTCCTTGCACTAGCCCCTCCCCAACCTGATGTTGGACATTAAACTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
||
| CDS CCA 90 bp | TCTGTGCCAGCTCATCTAGGAAGGTGGCTACTGTTTGACTGGTCTTaGCCATGTTCATCTCCAGGACGTAGTCCGCGTGTGTGTGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: SVPAHLGRWLLFDWS*PCSSPGRSPRVCGT Trigger: GGTTCCACACACACGCGGACTACGTCCTGGAGATGAACATGGCCAAGACCAGTCAAACAGTAGCCACCTTCCTAGATGAGCTGGCACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
||
| CDS GCA 90 bp | GAGAATGTTCCTCTGCACTGTGTAGGTGACCTCCACGTCAGCCAGTaGCTTCAGTGTGCTCTCATACGACACATCCTCGAAGTTCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ENVPLHCVGDLHVSQ*LQCALIRHILEVLS Trigger: GCTCAGAACTTCGAGGATGTGTCGTATGAGAGCACACTGAAGGCACTGGCTGACGTGGAGGTCACCTACACAGTGCAGAGGAACATTCTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
||
| CDS CCA 90 bp | TCAGCTTCTGTGCCAGCTCATCTAGGAAGGTGGCTACTGTTTGACTaGTCTTGGCCATGTTCATCTCCAGGACGTAGTCCGCGTGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SASVPAHLGRWLLFD*SWPCSSPGRSPRVC Trigger: ACACACACGCGGACTACGTCCTGGAGATGAACATGGCCAAGACCAGTCAAACAGTAGCCACCTTCCTAGATGAGCTGGCACAGAAGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
||
| CDS CCA 90 bp | TTCAGGGAATCTTTCGGGGTTTTCTCCTGCAGCCACACGACCCTCTaGTACACGTCCTGTCTCATGCTCATCTCTACATCAAACTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: FRESFGVFSCSHTTL*YTSCLMLISTSNSE Trigger: CTCGGAGTTTGATGTAGAGATGAGCATGAGACAGGACGTGTACCAGAGGGTCGTGTGGCTGCAGGAGAAAACCCCGAAAGATTCCCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS-3UTR CAA 90 bp | GTGGAGTTTAATGTCCAACATCAGGTTGGGGAGGGGCTAGTGCAAGGAGACCACTCCTCGTTGAGGTTCTaGTTGAAGTCGATGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: VEFNVQHQVGEGLVQGDHSSLRF*LKSMHS Trigger: GCTGTGCATCGACTTCAACAAGAACCTCAACGAGGA...GTGGTCTCCTTGCACTAGCCCCTCCCCAACCTGATGTTGGACATTAAACTCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
||
| CDS-3UTR CAA 90 bp | CATGATGCCAGTGAGGAAGTAGCTGGCCAAGCCTGGGGCAGAGCAGTACAGAGACTCTTCTTGATGTTCTaGATCTTCTCTTGTGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HDASEEVAGQAWGRAVQRLFLMF*IFSCVS Trigger: GGACACACAAGAGAAGATCAAGAACATCAAGAAGAG...TCTCTGTACTGCTCTGCCCCAGGCTTGGCCAGCTACTTCCTCACTGGCATCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS GCA 72 bp | ACGCAGGCGCCTCGCTGCCCTCCACCTGCAGACCCTTaGTCAGGAGGAAGGCGTCCTGCTTGGGGTCGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: TQAPRCPPPADP*SGGRRPAWGRG Trigger: GCCGCGACCCCAAGCAGGACGCCTTCCTCCTGAGCAAGGGTCTGCAGGTGGAGGGCAGCGAGGCGCCTGCGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CAA 72 bp | CACGCAGGCGCCTCGCTGCCCTCCACCTGCAGACCCTaGCTCAGGAGGAAGGCGTCCTGCTTGGGGTCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: HAGASLPSTCRP*LRRKASCLGSR Trigger: CCGCGACCCCAAGCAGGACGCCTTCCTCCTGAGCAAGGGTCTGCAGGTGGAGGGCAGCGAGGCGCCTGCGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS TCA 72 bp | CTTGCCGATCTCCTCTCCAGAGGCGGCGTCCCGCACTaGGTAGAGCCGCACGTCCTCGTGCCAGGCAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: LADLLSRGGVPH*VEPHVLVPGSG Trigger: GCCGCTGCCTGGCACGAGGACGTGCGGCTCTACTCAGTGCGGGACGCCGCCTCTGGAGAGGAGATCGGCAAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS GCA 72 bp | GCGCCCGTCGAATGGCAGTCCCCGCTTGGCGCACTCTaGCTCCTTCAGCTCCAGGATGACCGCGCGCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: APVEWQSPLGAL*LLQLQDDRALL Trigger: CAGGAGCGCGCGGTCATCCTGGAGCTGAAGGAGGCAGAGTGCGCCAAGCGGGGACTGCCATTCGACGGGCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CAA 90 bp | CGCATGTCCCATGCGTGGATGCGCCCGTCGAATGGCAGTCCCCGCTaGGCGCACTCTGCCTCCTTCAGCTCCAGGATGACCGCGCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RMSHAWMRPSNGSPR*AHSASFSSRMTARS Trigger: GGAGCGCGCGGTCATCCTGGAGCTGAAGGAGGCAGAGTGCGCCAAGCGGGGACTGCCATTCGACGGGCGCATCCACGCATGGGACATGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CAA 90 bp | CTGCCCTCCACCTGCAGACCCTTGCTCAGGAGGAAGGCGTCCTGCTaGGGGTCGCGGCCCAGGAACTGCTTCAGCATGGCGCTGGCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LPSTCRPLLRRKASC*GSRPRNCFSMALAS Trigger: GGACGCCAGCGCCATGCTGAAGCAGTTCCTGGGCCGCGACCCCAAGCAGGACGCCTTCCTCCTGAGCAAGGGTCTGCAGGTGGAGGGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS GCA 72 bp | AGGAAGGCGTCCTGCTTGGGGTCGCGGCCCAGGAACTaGTTCAGCATGGCGCTGGCGTCCTCAGAGCCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: RKASCLGSRPRN*FSMALASSEPP Trigger: AGGGGGCTCTGAGGACGCCAGCGCCATGCTGAAGCAGTTCCTGGGCCGCGACCCCAAGCAGGACGCCTTCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CCA 72 bp | CCTGCAGACCCTTGCTCAGGAGGAAGGCGTCCTGCTTaGGGTCGCGGCCCAGGAACTGCTTCAGCATGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: PADPCSGGRRPA*GRGPGTASAWR Trigger: GCGCCATGCTGAAGCAGTTCCTGGGCCGCGACCCCAAGCAGGACGCCTTCCTCCTGAGCAAGGGTCTGCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CAA 90 bp | TCATGCTGCAGCAGGGATGGCGCGTCAGGTGTGGGCTTCGTGAAATaGGCCACCATGGCTGCGACGGCCAGCTGCCGGCTGCCATCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SCCSRDGASGVGFVK*ATMAATASCRLPSC Trigger: GCAGGATGGCAGCCGGCAGCTGGCCGTCGCAGCCATGGTGGCCAATTTCACGAAGCCCACACCTGACGCGCCATCCCTGCTGCAGCATGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS TCA 72 bp | CGTCCTCGTGCCAGGCAGCGGCACCTTCCTCCAGCGTaGAGGTCAGCCCCAGCAGCTCTTGGTAGATGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RPRARQRHLPPA*RSAPAALGRWP Trigger: TGGCCATCTACCAAGAGCTGCTGGGGCTGACCTTCACGCTGGAGGAAGGTGCCGCTGCCTGGCACGAGGACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CCA 72 bp | GTAGCGCATGTCCCATGCGTGGATGCGCCCGTCGAATaGCAGTCCCCGCTTGGCGCACTCTGCCTCCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: VAHVPCVDAPVE*QSPLGALCLLQ Trigger: CTGAAGGAGGCAGAGTGCGCCAAGCGGGGACTGCCATTCGACGGGCGCATCCACGCATGGGACATGCGCTAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CAA 72 bp | ACCTGCAGACCCTTGCTCAGGAGGAAGGCGTCCTGCTaGGGGTCGCGGCCCAGGAACTGCTTCAGCATGGCG | + |
|
Preference number: 6 (lower is better) Translates to: TCRPLLRRKASC*GSRPRNCFSMA Trigger: CGCCATGCTGAAGCAGTTCCTGGGCCGCGACCCCAAGCAGGACGCCTTCCTCCTGAGCAAGGGTCTGCAGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS TCA 72 bp | GCGCCTCCACAAAGTCCCGCTCCACGTGGGTCCCACTaGACATGGCAAACTCCGCCTGCGAGCACAGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: APPQSPAPRGSH*TWQTPPASTAG Trigger: ACCAGCTGTGCTCGCAGGCGGAGTTTGCCATGTTCAGTGGGACCCACGTGGAGCGGGACTTTGTGGAGGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
||
| CDS GCA 72 bp | TCCACCTGCAGACCCTTGCTCAGGAGGAAGGCGTCCTaGTTGGGGTCGCGGCCCAGGAACTGCTTCAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: STCRPLLRRKAS*LGSRPRNCFSM Trigger: CATGCTGAAGCAGTTCCTGGGCCGCGACCCCAAGCAGGACGCCTTCCTCCTGAGCAAGGGTCTGCAGGTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CCA 72 bp | ATCTGGGACGGCGCCTCCACAAAGTCCCGCTCCACGTaGGTCCCACTGAACATGGCAAACTCCGCCTGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: IWDGASTKSRST*VPLNMANSACE Trigger: CTCGCAGGCGGAGTTTGCCATGTTCAGTGGGACCCACGTGGAGCGGGACTTTGTGGAGGCGCCGTCCCAGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CAA 90 bp | GGCTGGCATGTTGGTACCTGGTGTGGCTGGCACCCCGAGGATCTCTaGGCAGAGCCGGGCATATTCCTCAGCCGGGTCTGCGTCTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GWHVGTWCGWHPEDL*AEPGIFLSRVCVCL Trigger: CAGACAGACGCAGACCCGGCTGAGGAATATGCCCGGCTCTGCCAAGAGATCCTCGGGGTGCCAGCCACACCAGGTACCAACATGCCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS GCA 72 bp | CCTGGTTCATGTAGTAGCGCATGTCCCATGCGTGGATaGGCCCGTCGAATGGCAGTCCCCGCTTGGCGCACT | + |
|
Preference number: 6 (lower is better) Translates to: PGSCSSACPMRG*ARRMAVPAWRT Trigger: AGTGCGCCAAGCGGGGACTGCCATTCGACGGGCGCATCCACGCATGGGACATGCGCTACTACATGAACCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CCA 72 bp | GCTGTGCGCTCAGATCCCAGCGAAGATGATTCACGGTaGAGGCTGGGGATGCTGCATCCACCACGTCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AVRSDPSEDDSR*RLGMLHPPRPQ Trigger: CTGGGGACGTGGTGGATGCAGCATCCCCAGCCTCCACCGTGAATCATCTTCGCTGGGATCTGAGCGCACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS TCA 72 bp | GCCCTGATCTGCTGTGCGCTCAGATCCCAGCGAAGATaGTTCACGGTGGAGGCTGGGGATGCTGCATCCACC | + |
|
Preference number: 6 (lower is better) Translates to: ALICCALRSQRR*FTVEAGDAAST Trigger: GGTGGATGCAGCATCCCCAGCCTCCACCGTGAATCATCTTCGCTGGGATCTGAGCGCACAGCAGATCAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
||
| CDS GCA 72 bp | CTCCTCCACCTGGTTCATGTAGTAGCGCATGTCCCATaGGTGGATGCGCCCGTCGAATGGCAGTCCCCGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLHLVHVVAHVP*VDAPVEWQSPL Trigger: AAGCGGGGACTGCCATTCGACGGGCGCATCCACGCATGGGACATGCGCTACTACATGAACCAGGTGGAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
||
| CDS CCA 72 bp | ACTGAGCATCATAGCCGCCAGCTAGGTGGCCGAAAGTaGCTGGCATGTTGGTACCTGGTGTGGCTGGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: TEHHSRQLGGRK*LACWYLVWLAP Trigger: GGGTGCCAGCCACACCAGGTACCAACATGCCAGCCACTTTCGGCCACCTAGCTGGCGGCTATGATGCTCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
||
| CDS TCA 72 bp | ACATGGCAAACTCCGCCTGCGAGCACAGCTGGTGCATaGCGTGCCCGAACTCGTGGAAGTAGGTCTCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: TWQTPPASTAGA*RARTRGSRSPP Trigger: AGGTGGAGACCTACTTCCACGAGTTCGGGCACGTCATGCACCAGCTGTGCTCGCAGGCGGAGTTTGCCATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
||
| CDS TCA 72 bp | TCAGCCGGGTCTGCGTCTGTCTGTGTGTGCAGGACCTaGTCCACCTTGGCAAGCACAATCTGCCGCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SAGSASVCVCRT*STLASTICRRL Trigger: CAACCTGCGGCAGATTGTGCTTGCCAAGGTGGATCAGGTCCTGCACACACAGACAGACGCAGACCCGGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
||
| CDS GCA 72 bp | AAACTCCGAGAGCTTCTTGTCAGCCTCTGTGCTGGCTaGACGGATGTCCTTGCACGGGGACACGTGTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: KLRELLVSLCAG*TDVLARGHVLG Trigger: CCCCAACACGTGTCCCCGTGCAAGGACATCCGTGCAGCCAGCACAGAGGCTGACAAGAAGCTCTCGGAGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
||
| CDS GCA 72 bp | CCGGCCCAGCTTGATGAGCCGCTCCAGGTAGCGAGCTaGTTCAGGCTTCAGGGAATCTTTCGGGGTTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: PAQLDEPLQVAS*FRLQGIFRGFL Trigger: GAGAAAACCCCGAAAGATTCCCTGAAGCCTGAAGCAGCTCGCTACCTGGAGCGGCTCATCAAGCTGGGCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
||
| CDS GCA 72 bp | ATTTCCCTTCCCTGGGGTATAGGTCGAGGTAGAACTTaGCGATCTCCTCTCCAGAGGCGGCGTCCCGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: ISLPWGIGRGRT*RSPLQRRRPAL Trigger: CAGTGCGGGACGCCGCCTCTGGAGAGGAGATCGGCAAGTTCTACCTCGACCTATACCCCAGGGAAGGGAAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
||
| CDS GCA 72 bp | CTCTTGGCAGAGCCGGGCATATTCCTCAGCCGGGTCTaGGTCTGTCTGTGTGTGCAGGACCTGATCCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLAEPGIFLSRV*VCLCVQDLIHL Trigger: AAGGTGGATCAGGTCCTGCACACACAGACAGACGCAGACCCGGCTGAGGAATATGCCCGGCTCTGCCAAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
||
| CDS CCA 72 bp | GGACGTAGTCCGCGTGTGTGTGGAACCCCAACAGGCTaGACTTCTGTGCTCGCAGGGACACTAGCTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: GRSPRVCGTPTG*TSVLAGTLAPS Trigger: TGAAGGAGCTAGTGTCCCTGCGAGCACAGAAGTCCAGCCTGTTGGGGTTCCACACACACGCGGACTACGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CAA 90 bp | AGCCTCTGTGCTGGCTGCACGGATGTCCTTGCACGGGGACACGTGTaGGGGGAAGTCGAGAATGTTCCTCTGCACTGTGTAGGTGACCTC | + |
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Preference number: 6 (lower is better) Translates to: SLCAGCTDVLARGHV*GEVENVPLHCVGDL Trigger: GAGGTCACCTACACAGTGCAGAGGAACATTCTCGACTTCCCCCAACACGTGTCCCCGTGCAAGGACATCCGTGCAGCCAGCACAGAGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CAA 90 bp | TCCGAGAGCTTCTTGTCAGCCTCTGTGCTGGCTGCACGGATGTCCTaGCACGGGGACACGTGTTGGGGGAAGTCGAGAATGTTCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SESFLSASVLAARMS*HGDTCWGKSRMFLC Trigger: GCAGAGGAACATTCTCGACTTCCCCCAACACGTGTCCCCGTGCAAGGACATCCGTGCAGCCAGCACAGAGGCTGACAAGAAGCTCTCGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CAA 90 bp | GCTCGCAGGGACACTAGCTCCTTCAGAATGGCACAGTTCTCCTCCTaGCAGCGACAGTTGAAGGCCTCCTCCAACAGGCGTCGTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: ARRDTSSFRMAQFSS*QRQLKASSNRRRVS Trigger: GGAGACACGACGCCTGTTGGAGGAGGCCTTCAACTGTCGCTGCAAGGAGGAGAACTGTGCCATTCTGAAGGAGCTAGTGTCCCTGCGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CAA 90 bp | ACTAGCTCCTTCAGAATGGCACAGTTCTCCTCCTTGCAGCGACAGTaGAAGGCCTCCTCCAACAGGCGTCGTGTCTCCGGCACATGGCAC | + |
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Preference number: 6 (lower is better) Translates to: TSSFRMAQFSSLQRQ*KASSNRRRVSGTWH Trigger: GTGCCATGTGCCGGAGACACGACGCCTGTTGGAGGAGGCCTTCAACTGTCGCTGCAAGGAGGAGAACTGTGCCATTCTGAAGGAGCTAGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS TCA 72 bp | TCAGAATGGCACAGTTCTCCTCCTTGCAGCGACAGTTaGAGGCCTCCTCCAACAGGCGTCGTGTCTCCGGCA | + |
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Preference number: 6 (lower is better) Translates to: SEWHSSPPCSDS*RPPPTGVVSPA Trigger: TGCCGGAGACACGACGCCTGTTGGAGGAGGCCTTCAACTGTCGCTGCAAGGAGGAGAACTGTGCCATTCTGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS GCA 72 bp | TCTTGTCAGCCTCTGTGCTGGCTGCACGGATGTCCTTaGACGGGGACACGTGTTGGGGGAAGTCGAGAATGT | + |
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Preference number: 6 (lower is better) Translates to: SCQPLCWLHGCP*TGTRVGGSREC Trigger: ACATTCTCGACTTCCCCCAACACGTGTCCCCGTGCAAGGACATCCGTGCAGCCAGCACAGAGGCTGACAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS GCA 72 bp | AGGGTACTTGAGGGTGACCTTCAGCTTGCCGTCCTCTaGCTTCTCCAGAGAGCTCAGAAAGTCCTCCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: RVLEGDLQLAVL*LLQRAQKVLRE Trigger: CTCCCGGAGGACTTTCTGAGCTCTCTGGAGAAGGCAGAGGACGGCAAGCTGAAGGTCACCCTCAAGTACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CAA 72 bp | GCTGGCTGCACGGATGTCCTTGCACGGGGACACGTGTaGGGGGAAGTCGAGAATGTTCCTCTGCACTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: AGCTDVLARGHV*GEVENVPLHCV Trigger: TACACAGTGCAGAGGAACATTCTCGACTTCCCCCAACACGTGTCCCCGTGCAAGGACATCCGTGCAGCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CAA 72 bp | TTCAGAATGGCACAGTTCTCCTCCTTGCAGCGACAGTaGAAGGCCTCCTCCAACAGGCGTCGTGTCTCCGGC | + |
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Preference number: 6 (lower is better) Translates to: FRMAQFSSLQRQ*KASSNRRRVSG Trigger: GCCGGAGACACGACGCCTGTTGGAGGAGGCCTTCAACTGTCGCTGCAAGGAGGAGAACTGTGCCATTCTGAA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CAA 90 bp | CCACCCAGCTCCTCTCTTGTGAAGGGCAGGAAGGTGGTGTCCTCGTaGAGGTTCTTGTTGAAGTCGATGCACAGCAGGCTCAGCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: PPSSSLVKGRKVVSS*RFLLKSMHSRLSLF Trigger: GAAGAGGCTGAGCCTGCTGTGCATCGACTTCAACAAGAACCTCAACGAGGACACCACCTTCCTGCCCTTCACAAGAGAGGAGCTGGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS TCA 72 bp | GGGGGAAGTCGAGAATGTTCCTCTGCACTGTGTAGGTaGCCTCCACGTCAGCCAGTGCCTTCAGTGTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: GGSRECSSALCR*PPRQPVPSVCS Trigger: AGAGCACACTGAAGGCACTGGCTGACGTGGAGGTCACCTACACAGTGCAGAGGAACATTCTCGACTTCCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS GCA 72 bp | ACTCGGTCGTACACACACTTGGTCTGCTCGATGAGCTaGGTGGTTAGAGCCCTGATCTGCTGTGCGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: TRSYTHLVCSMS*VVRALICCALR Trigger: TCTGAGCGCACAGCAGATCAGGGCTCTAACCACGCAGCTCATCGAGCAGACCAAGTGTGTGTACGACCGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS GCA 72 bp | CTACATCAAACTCCGAGAGCTTCTTGTCAGCCTCTGTaGTGGCTGCACGGATGTCCTTGCACGGGGACACGT | + |
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Preference number: 6 (lower is better) Translates to: LHQTPRASCQPL*WLHGCPCTGTR Trigger: ACGTGTCCCCGTGCAAGGACATCCGTGCAGCCAGCACAGAGGCTGACAAGAAGCTCTCGGAGTTTGATGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS GCA 72 bp | GCTTCAGGCTTCAGGGAATCTTTCGGGGTTTTCTCCTaGAGCCACACGACCCTCTGGTACACGTCCTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: ASGFRESFGVFS*SHTTLWYTSCL Trigger: GAGACAGGACGTGTACCAGAGGGTCGTGTGGCTGCAGGAGAAAACCCCGAAAGATTCCCTGAAGCCTGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CCA 72 bp | CATCAAACTCCGAGAGCTTCTTGTCAGCCTCTGTGCTaGCTGCACGGATGTCCTTGCACGGGGACACGTGTT | + |
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Preference number: 6 (lower is better) Translates to: HQTPRASCQPLC*LHGCPCTGTRV Trigger: AACACGTGTCCCCGTGCAAGGACATCCGTGCAGCCAGCACAGAGGCTGACAAGAAGCTCTCGGAGTTTGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS GCA 72 bp | CCTCTGCACTGTGTAGGTGACCTCCACGTCAGCCAGTaGCTTCAGTGTGCTCTCATACGACACATCCTCGAA | + |
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Preference number: 6 (lower is better) Translates to: PLHCVGDLHVSQ*LQCALIRHILE Trigger: TTCGAGGATGTGTCGTATGAGAGCACACTGAAGGCACTGGCTGACGTGGAGGTCACCTACACAGTGCAGAGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CAA 72 bp | GTGAAGGGCAGGAAGGTGGTGTCCTCGTTGAGGTTCTaGTTGAAGTCGATGCACAGCAGGCTCAGCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VKGRKVVSSLRF*LKSMHSRLSLF Trigger: GAAGAGGCTGAGCCTGCTGTGCATCGACTTCAACAAGAACCTCAACGAGGACACCACCTTCCTGCCCTTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CAA 72 bp | GACACTAGCTCCTTCAGAATGGCACAGTTCTCCTCCTaGCAGCGACAGTTGAAGGCCTCCTCCAACAGGCGT | + |
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Preference number: 6 (lower is better) Translates to: DTSSFRMAQFSS*QRQLKASSNRR Trigger: ACGCCTGTTGGAGGAGGCCTTCAACTGTCGCTGCAAGGAGGAGAACTGTGCCATTCTGAAGGAGCTAGTGTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CAA 90 bp | GCTGGTCCTGTAGTCCATGCCAACCTTGGGGCTAAGCACACCCTCTaGCTTGAAGCGTGTGTGGAACATGTCCATCGAGTACACTTCGCT | + |
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Preference number: 6 (lower is better) Translates to: AGPVVHANLGAKHTL*LEACVEHVHRVHFA Trigger: AGCGAAGTGTACTCGATGGACATGTTCCACACACGCTTCAAGCAAGAGGGTGTGCTTAGCCCCAAGGTTGGCATGGACTACAGGACCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CCA 72 bp | GCTCATCTAGGAAGGTGGCTACTGTTTGACTGGTCTTaGCCATGTTCATCTCCAGGACGTAGTCCGCGTGTG | + |
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Preference number: 6 (lower is better) Translates to: AHLGRWLLFDWS*PCSSPGRSPRV Trigger: CACACGCGGACTACGTCCTGGAGATGAACATGGCCAAGACCAGTCAAACAGTAGCCACCTTCCTAGATGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CCA 72 bp | GTGCCAGCTCATCTAGGAAGGTGGCTACTGTTTGACTaGTCTTGGCCATGTTCATCTCCAGGACGTAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: VPAHLGRWLLFD*SWPCSSPGRSP Trigger: CGGACTACGTCCTGGAGATGAACATGGCCAAGACCAGTCAAACAGTAGCCACCTTCCTAGATGAGCTGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CAA 72 bp | AAGGGCAGGAAGGTGGTGTCCTCGTTGAGGTTCTTGTaGAAGTCGATGCACAGCAGGCTCAGCCTCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: KGRKVVSSLRFL*KSMHSRLSLFL Trigger: CAAGAAGAGGCTGAGCCTGCTGTGCATCGACTTCAACAAGAACCTCAACGAGGACACCACCTTCCTGCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CCA 72 bp | TCTTTCGGGGTTTTCTCCTGCAGCCACACGACCCTCTaGTACACGTCCTGTCTCATGCTCATCTCTACATCA | + |
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Preference number: 6 (lower is better) Translates to: SFGVFSCSHTTL*YTSCLMLISTS Trigger: TGATGTAGAGATGAGCATGAGACAGGACGTGTACCAGAGGGTCGTGTGGCTGCAGGAGAAAACCCCGAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CAA 72 bp | TCCATGCCAACCTTGGGGCTAAGCACACCCTCTTGCTaGAAGCGTGTGTGGAACATGTCCATCGAGTACACT | + |
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Preference number: 6 (lower is better) Translates to: SMPTLGLSTPSC*KRVWNMSIEYT Trigger: AGTGTACTCGATGGACATGTTCCACACACGCTTCAAGCAAGAGGGTGTGCTTAGCCCCAAGGTTGGCATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CAA 72 bp | GTAGTCCATGCCAACCTTGGGGCTAAGCACACCCTCTaGCTTGAAGCGTGTGTGGAACATGTCCATCGAGTA | + |
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Preference number: 6 (lower is better) Translates to: VVHANLGAKHTL*LEACVEHVHRV Trigger: TACTCGATGGACATGTTCCACACACGCTTCAAGCAAGAGGGTGTGCTTAGCCCCAAGGTTGGCATGGACTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CAA 90 bp | TCCTCTCTTGTGAAGGGCAGGAAGGTGGTGTCCTCGTTGAGGTTCTaGTTGAAGTCGATGCACAGCAGGCTCAGCCTCTTCTTGATGTTC | + |
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Preference number: 6 (lower is better) Translates to: SSLVKGRKVVSSLRF*LKSMHSRLSLFLMF Trigger: GAACATCAAGAAGAGGCTGAGCCTGCTGTGCATCGACTTCAACAAGAACCTCAACGAGGACACCACCTTCCTGCCCTTCACAAGAGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CAA 90 bp | TCTCTTGTGAAGGGCAGGAAGGTGGTGTCCTCGTTGAGGTTCTTGTaGAAGTCGATGCACAGCAGGCTCAGCCTCTTCTTGATGTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SLVKGRKVVSSLRFL*KSMHSRLSLFLMFL Trigger: CAAGAACATCAAGAAGAGGCTGAGCCTGCTGTGCATCGACTTCAACAAGAACCTCAACGAGGACACCACCTTCCTGCCCTTCACAAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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| CDS CCA 72 bp | TTGGGGCTAAGCACACCCTCTTGCTTGAAGCGTGTGTaGAACATGTCCATCGAGTACACTTCGCTCCATAAG | + |
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Preference number: 6 (lower is better) Translates to: LGLSTPSCLKRV*NMSIEYTSLHK Trigger: CTTATGGAGCGAAGTGTACTCGATGGACATGTTCCACACACGCTTCAAGCAAGAGGGTGTGCTTAGCCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005057.7 |
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