Pregenerated sensors for THOC7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053453Ensembl transcript IDs: ENSMUST00000065865.10, ENSMUST00000225325.2, ENSMUST00000225559.2, ENSMUST00000225891.2
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | ATGCTGAAGTTGAAATATCCCAAAAGTACAACACACTaGACCCAGGAAGCCCATGCAGCTATTCGCTGTCCC | + |
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Preference number: 3 (lower is better) Translates to: MLKLKYPKSTTH*TQEAHAAIRCP Trigger: GGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTGTACTTTTGGGATATTTCAACTTCAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR TCA 90 bp | CCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATGGCGACGGTCAGTCCTCATGCCTGTCTGGGTaGTGCTGGATCACTTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: PRKPMQLFAVPVNGDGQSSCLSG*CWITLA Trigger: GGCCAAAGTGATCCAGCATCACCCAGACAGGCATGA...GGACTGACCGTCGCCATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR GCA 90 bp | CCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATGGCGACGGTCAGTCCCACACTGGGACAGAGTaGTCAGCATGCGTTGGTACT | + |
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Preference number: 4 (lower is better) Translates to: PRKPMQLFAVPVNGDGQSHTGTE*SACVGT Trigger: AGTACCAACGCATGCTGAGCACTCTGTCCCAGTGTG...GGACTGACCGTCGCCATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR CCA 90 bp | CCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATGGCGACGGTCAGTCCGTGCTCAGCATGCGTTaGTACTGGCTATACCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: PRKPMQLFAVPVNGDGQSVLSMR*YWLYPS Trigger: GGAAGGGTATAGCCAGTACCAACGCATGCTGAGCAC...GGACTGACCGTCGCCATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR TCA 90 bp | CAACACACTGAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATGGCTCATGCCTGTCTGGGTaGTGCTGGATCACTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QHTEPRKPMQLFAVPVNGSCLSG*CWITLA Trigger: GGCCAAAGTGATCCAGCATCACCCAGACAGGCATGA...GCCATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR TCA 90 bp | CCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATGGCGACGGTCAGTCCAGCTTCATCCACCTCTaGCAGCTTGTCATCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PRKPMQLFAVPVNGDGQSSFIHL*QLVIIL Trigger: GAGAATGATGACAAGCTGTCAGAGGTGGATGAAGCT...GGACTGACCGTCGCCATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR GCA 90 bp | GAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATGGCGACGGTCAGACAGAGTGCTCAGCATaGGTTGGTACTGGCTATACC | + |
|
Preference number: 4 (lower is better) Translates to: EPRKPMQLFAVPVNGDGQTECSA*VGTGYT Trigger: GGTATAGCCAGTACCAACGCATGCTGAGCACTCTGT...CTGACCGTCGCCATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR CCA 90 bp | CCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATGGCGACGGTCAGTCCTGTCTCATGCCTGTCTaGGTGATGCTGGATCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: PRKPMQLFAVPVNGDGQSCLMPV*VMLDHF Trigger: AAAGTGATCCAGCATCACCCAGACAGGCATGAGACA...GGACTGACCGTCGCCATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR TCA 90 bp | ACTGAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATGGCGACGGTTCCATGGTGCTTTCTTaGGCTTCATCCACCTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: TEPRKPMQLFAVPVNGDGSMVLS*ASSTSD Trigger: GTCAGAGGTGGATGAAGCTCAAGAAAGCACCATGGA...ACCGTCGCCATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR CCA 90 bp | GAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATGGCGACGGTCAGCTATACCCTTCCTCTTaGGATCCAGAGTTGCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: EPRKPMQLFAVPVNGDGQLYPSS*DPELHH Trigger: ATGGTGCAACTCTGGATCCCAAGAGGAAGGGTATAG...CTGACCGTCGCCATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR CCA 90 bp | CCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATGGCGACGGTCAGTCCATTGAAAATTCACACTaGGACAGAGTGCTCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: PRKPMQLFAVPVNGDGQSIENSH*DRVLSM Trigger: CATGCTGAGCACTCTGTCCCAGTGTGAATTTTCAAT...GGACTGACCGTCGCCATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR TCA 90 bp | GAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATGGCGACGGTCAGCAATGTTTTGCCCATTaGAAATTCACACTGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: EPRKPMQLFAVPVNGDGQQCFAH*KFTLGQ Trigger: CTGTCCCAGTGTGAATTTTCAATGGGCAAAACATTG...CTGACCGTCGCCATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR GCA 90 bp | CCAAAAGTACAACACACTGAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTACAGAGTGCTCAGCATaGGTTGGTACTGGCTATACC | + |
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Preference number: 4 (lower is better) Translates to: PKVQHTEPRKPMQLFAVPTECSA*VGTGYT Trigger: GGTATAGCCAGTACCAACGCATGCTGAGCACTCTGT...AGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTGTACTTTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR GCA 90 bp | CAACACACTGAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATGGCGATGCTCTAATTCTTTaGCCAGAGCCTCTAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QHTEPRKPMQLFAVPVNGDALIL*PEPLAP Trigger: AGGAGCTAGAGGCTCTGGGCAAAGAATTAGAGCATC...GCCATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR TCA 90 bp | GAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATGGCGACGGTCAGTTCTCCAATGTCTGTTaGAGTTCATGGATGGTACTA | + |
|
Preference number: 4 (lower is better) Translates to: EPRKPMQLFAVPVNGDGQFSNVC*SSWMVL Trigger: TAGTACCATCCATGAACTTCAACAGACATTGGAGAA...CTGACCGTCGCCATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR TCA 90 bp | AAAGTACAACACACTGAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTATCCATGGTGCTTTCTTaGGCTTCATCCACCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KVQHTEPRKPMQLFAVPVSMVLS*ASSTSD Trigger: GTCAGAGGTGGATGAAGCTCAAGAAAGCACCATGGA...TACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTGTACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR TCA 90 bp | GAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATGGCGACGGTCAGCGTATTCGTTTTGCTTaGAGAATCTGCTTTTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: EPRKPMQLFAVPVNGDGQRIRFA*RICFLH Trigger: GTGTAAAAAGCAGATTCTTCAAGCAAAACGAATACG...CTGACCGTCGCCATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR TCA 90 bp | GTACAACACACTGAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATAGCTTCATCCACCTCTaGCAGCTTGTCATCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VQHTEPRKPMQLFAVPVNSFIHL*QLVIIL Trigger: GAGAATGATGACAAGCTGTCAGAGGTGGATGAAGCT...ATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR GCA 90 bp | AATATCCCAAAAGTACAACACACTGAACCCAGGAAGCCCATGCAGCTATTCGCTCACACTGGGACAGAGTaGTCAGCATGCGTTGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: NIPKVQHTEPRKPMQLFAHTGTE*SACVGT Trigger: AGTACCAACGCATGCTGAGCACTCTGTCCCAGTGTG...AGCGAATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTGTACTTTTGGGATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR GCA 90 bp | GTACAACACACTGAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATGATGCTCTAATTCTTTaGCCAGAGCCTCTAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VQHTEPRKPMQLFAVPVNDALIL*PEPLAP Trigger: AGGAGCTAGAGGCTCTGGGCAAAGAATTAGAGCATC...ATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR TCA 90 bp | ACTGAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATGGCGACGGTGTACTAAGAAGAACGTaGAATTGTTTCCGTCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TEPRKPMQLFAVPVNGDGVLRRT*NCFRLN Trigger: ATTGAGACGGAAACAATTTCACGTTCTTCTTAGTAC...ACCGTCGCCATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR CCA 90 bp | GTTGAAATATCCCAAAAGTACAACACACTGAACCCAGGAAGCCCATGCAGCTATGTGCTCAGCATGCGTTaGTACTGGCTATACCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VEISQKYNTLNPGSPCSYVLSMR*YWLYPS Trigger: GGAAGGGTATAGCCAGTACCAACGCATGCTGAGCAC...ATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTGTACTTTTGGGATATTTCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR CCA 90 bp | CCTCTGACAGCTTGTCATCATTCTCCAATGTCTGTTGAAGTTCATGGATGGTACGTGCTCAGCATGCGTTaGTACTGGCTATACCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLTACHHSPMSVEVHGWYVLSMR*YWLYPS Trigger: GGAAGGGTATAGCCAGTACCAACGCATGCTGAGCAC...GTACCATCCATGAACTTCAACAGACATTGGAGAATGATGACAAGCTGTCAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225559.2 |
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| CDS-3UTR CCA 90 bp | CCAAAAGTACAACACACTGAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTATTGAAAATTCACACTaGGACAGAGTGCTCAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: PKVQHTEPRKPMQLFAVPIENSH*DRVLSM Trigger: CATGCTGAGCACTCTGTCCCAGTGTGAATTTTCAAT...AGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTGTACTTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR TCA 90 bp | CAACACACTGAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATGGCCGTATTCGTTTTGCTTaGAGAATCTGCTTTTTACAC | + |
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Preference number: 4 (lower is better) Translates to: QHTEPRKPMQLFAVPVNGRIRFA*RICFLH Trigger: GTGTAAAAAGCAGATTCTTCAAGCAAAACGAATACG...GCCATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR TCA 90 bp | GTCATCATTCTCCAATGTCTGTTGAAGTTCATGGATGGTACTAAGAAGAACGTGTCATGCCTGTCTGGGTaGTGCTGGATCACTTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: VIILQCLLKFMDGTKKNVSCLSG*CWITLA Trigger: GGCCAAAGTGATCCAGCATCACCCAGACAGGCATGA...CACGTTCTTCTTAGTACCATCCATGAACTTCAACAGACATTGGAGAATGATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225559.2 |
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| CDS-3UTR CCA 90 bp | GTTGAAATATCCCAAAAGTACAACACACTGAACCCAGGAAGCCCATGCAGCTATTGTCTCATGCCTGTCTaGGTGATGCTGGATCACTTT | + |
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Preference number: 4 (lower is better) Translates to: VEISQKYNTLNPGSPCSYCLMPV*VMLDHF Trigger: AAAGTGATCCAGCATCACCCAGACAGGCATGAGACA...ATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTGTACTTTTGGGATATTTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR GCA 90 bp | GTCATCATTCTCCAATGTCTGTTGAAGTTCATGGATGGTACTAAGAAGAACGTGACAGAGTGCTCAGCATaGGTTGGTACTGGCTATACC | + |
|
Preference number: 4 (lower is better) Translates to: VIILQCLLKFMDGTKKNVTECSA*VGTGYT Trigger: GGTATAGCCAGTACCAACGCATGCTGAGCACTCTGT...CACGTTCTTCTTAGTACCATCCATGAACTTCAACAGACATTGGAGAATGATGAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225559.2 |
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| CDS-3UTR GCA 90 bp | CCAAAAGTACAACACACTGAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTTTAATATGTGAGAGATaGTCTAATTCTTTGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PKVQHTEPRKPMQLFAVPLICER*SNSLPR Trigger: TCTGGGCAAAGAATTAGAGCATCTCTCACATATTAA...AGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTGTACTTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR TCA 90 bp | GTTGAAATATCCCAAAAGTACAACACACTGAACCCAGGAAGCCCATGCAGCTATCAATGTTTTGCCCATTaGAAATTCACACTGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: VEISQKYNTLNPGSPCSYQCFAH*KFTLGQ Trigger: CTGTCCCAGTGTGAATTTTCAATGGGCAAAACATTG...ATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTGTACTTTTGGGATATTTCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR TCA 90 bp | AATATCCCAAAAGTACAACACACTGAACCCAGGAAGCCCATGCAGCTATTCGCTGTACTAAGAAGAACGTaGAATTGTTTCCGTCTCAAT | + |
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Preference number: 4 (lower is better) Translates to: NIPKVQHTEPRKPMQLFAVLRRT*NCFRLN Trigger: ATTGAGACGGAAACAATTTCACGTTCTTCTTAGTAC...AGCGAATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTGTACTTTTGGGATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR TCA 90 bp | GTTGAAATATCCCAAAAGTACAACACACTGAACCCAGGAAGCCCATGCAGCTATTTCTCCAATGTCTGTTaGAGTTCATGGATGGTACTA | + |
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Preference number: 4 (lower is better) Translates to: VEISQKYNTLNPGSPCSYFSNVC*SSWMVL Trigger: TAGTACCATCCATGAACTTCAACAGACATTGGAGAA...ATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTGTACTTTTGGGATATTTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR CCA 90 bp | CTTGTCATCATTCTCCAATGTCTGTTGAAGTTCATGGATGGTACTAAGAAGAACCTATACCCTTCCTCTTaGGATCCAGAGTTGCACCAT | + |
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Preference number: 4 (lower is better) Translates to: LVIILQCLLKFMDGTKKNLYPSS*DPELHH Trigger: ATGGTGCAACTCTGGATCCCAAGAGGAAGGGTATAG...GTTCTTCTTAGTACCATCCATGAACTTCAACAGACATTGGAGAATGATGACAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225559.2 |
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| CDS-3UTR CCA 90 bp | ATTCTCCAATGTCTGTTGAAGTTCATGGATGGTACTAAGAAGAACGTGAAATTGTGTCTCATGCCTGTCTaGGTGATGCTGGATCACTTT | + |
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Preference number: 4 (lower is better) Translates to: ILQCLLKFMDGTKKNVKLCLMPV*VMLDHF Trigger: AAAGTGATCCAGCATCACCCAGACAGGCATGAGACA...CAATTTCACGTTCTTCTTAGTACCATCCATGAACTTCAACAGACATTGGAGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225559.2 |
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| CDS-3UTR TCA 90 bp | ATCATTCTCCAATGTCTGTTGAAGTTCATGGATGGTACTAAGAAGAACGTGAAACAATGTTTTGCCCATTaGAAATTCACACTGGGACAG | + |
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Preference number: 4 (lower is better) Translates to: IILQCLLKFMDGTKKNVKQCFAH*KFTLGQ Trigger: CTGTCCCAGTGTGAATTTTCAATGGGCAAAACATTG...TTTCACGTTCTTCTTAGTACCATCCATGAACTTCAACAGACATTGGAGAATGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225559.2 |
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| CDS-3UTR CCA 90 bp | CTCCAATGTCTGTTGAAGTTCATGGATGGTACTAAGAAGAACGTGAAATTGTTTATTGAAAATTCACACTaGGACAGAGTGCTCAGCATG | + |
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Preference number: 4 (lower is better) Translates to: LQCLLKFMDGTKKNVKLFIENSH*DRVLSM Trigger: CATGCTGAGCACTCTGTCCCAGTGTGAATTTTCAAT...AAACAATTTCACGTTCTTCTTAGTACCATCCATGAACTTCAACAGACATTGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225559.2 |
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| CDS-3UTR CAA 90 bp | GAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATGGCGACGGTCAGGCTATACCCTTCCTCTaGGGATCCAGAGTTGCACCA | + |
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Preference number: 5 (lower is better) Translates to: EPRKPMQLFAVPVNGDGQAIPFL*GSRVAP Trigger: TGGTGCAACTCTGGATCCCAAGAGGAAGGGTATAGC...CTGACCGTCGCCATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR CAA 90 bp | CAACACACTGAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATGGCAGTGCTCAGCATGCGTaGGTACTGGCTATACCCTTC | + |
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Preference number: 5 (lower is better) Translates to: QHTEPRKPMQLFAVPVNGSAQHA*VLAIPF Trigger: GAAGGGTATAGCCAGTACCAACGCATGCTGAGCACT...GCCATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR CAA 90 bp | GTACAACACACTGAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATGCTATACCCTTCCTCTaGGGATCCAGAGTTGCACCA | + |
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Preference number: 5 (lower is better) Translates to: VQHTEPRKPMQLFAVPVNAIPFL*GSRVAP Trigger: TGGTGCAACTCTGGATCCCAAGAGGAAGGGTATAGC...ATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS TCA 90 bp | TTGCCCAGAGCCTCTAGCTCCTTCAGTGTCTCATGCCTGTCTGGGTaGTGCTGGATCACTTTGGCCAAAGCGTCATATTCTTGTCGATTT | + |
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Preference number: 5 (lower is better) Translates to: LPRASSSFSVSCLSG*CWITLAKASYSCRF Trigger: AAATCGACAAGAATATGACGCTTTGGCCAAAGTGATCCAGCATCACCCAGACAGGCATGAGACACTGAAGGAGCTAGAGGCTCTGGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 ENSMUST00000225891.2 |
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| CDS-3UTR CAA 90 bp | GTACAACACACTGAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATAGATGCTCTAATTCTTaGCCCAGAGCCTCTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VQHTEPRKPMQLFAVPVNRCSNS*PRASSS Trigger: GGAGCTAGAGGCTCTGGGCAAAGAATTAGAGCATCT...ATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS GCA 90 bp | ATGTTTTGCCCATTGAAAATTCACACTGGGACAGAGTGCTCAGCATaGGTTGGTACTGGCTATACCCTTCCTCTTGGGATCCAGAGTTGC | + |
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Preference number: 5 (lower is better) Translates to: MFCPLKIHTGTECSA*VGTGYTLPLGIQSC Trigger: GCAACTCTGGATCCCAAGAGGAAGGGTATAGCCAGTACCAACGCATGCTGAGCACTCTGTCCCAGTGTGAATTTTCAATGGGCAAAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 ENSMUST00000225559.2 |
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| CDS-3UTR CAA 90 bp | CAACACACTGAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATGGCTCTTGGGATCCAGAGTaGCACCATTTAATGAAGCTT | + |
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Preference number: 5 (lower is better) Translates to: QHTEPRKPMQLFAVPVNGSWDPE*HHLMKL Trigger: AAGCTTCATTAAATGGTGCAACTCTGGATCCCAAGA...GCCATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS GCA 90 bp | ATACCAGCAATGTTTTGCCCATTGAAAATTCACACTGGGACAGAGTaGTCAGCATGCGTTGGTACTGGCTATACCCTTCCTCTTGGGATC | + |
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Preference number: 5 (lower is better) Translates to: IPAMFCPLKIHTGTE*SACVGTGYTLPLGI Trigger: GATCCCAAGAGGAAGGGTATAGCCAGTACCAACGCATGCTGAGCACTCTGTCCCAGTGTGAATTTTCAATGGGCAAAACATTGCTGGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 ENSMUST00000225559.2 |
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| CDS-3UTR CAA 90 bp | GTTGAAATATCCCAAAAGTACAACACACTGAACCCAGGAAGCCCATGCAGCTATAGTGCTCAGCATGCGTaGGTACTGGCTATACCCTTC | + |
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Preference number: 5 (lower is better) Translates to: VEISQKYNTLNPGSPCSYSAQHA*VLAIPF Trigger: GAAGGGTATAGCCAGTACCAACGCATGCTGAGCACT...ATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTGTACTTTTGGGATATTTCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR CAA 90 bp | CAACACACTGAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATGGCTATACCAGCAATGTTTaGCCCATTGAAAATTCACAC | + |
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Preference number: 5 (lower is better) Translates to: QHTEPRKPMQLFAVPVNGYTSNV*PIENSH Trigger: GTGTGAATTTTCAATGGGCAAAACATTGCTGGTATA...GCCATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR CAA 90 bp | GTTGAAATATCCCAAAAGTACAACACACTGAACCCAGGAAGCCCATGCAGCTATAGATGCTCTAATTCTTaGCCCAGAGCCTCTAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: VEISQKYNTLNPGSPCSYRCSNS*PRASSS Trigger: GGAGCTAGAGGCTCTGGGCAAAGAATTAGAGCATCT...ATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTGTACTTTTGGGATATTTCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR CAA 90 bp | CCAAAAGTACAACACACTGAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTATTCTCCAATGTCTGTaGAAGTTCATGGATGGTACT | + |
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Preference number: 5 (lower is better) Translates to: PKVQHTEPRKPMQLFAVPILQCL*KFMDGT Trigger: AGTACCATCCATGAACTTCAACAGACATTGGAGAAT...AGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTGTACTTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS TCA 90 bp | CTTAGGGTCTGCTTCCATGGTGCTTTCTTGAGCTTCATCCACCTCTaGCAGCTTGTCATCATTCTCCAATGTCTGTTGAAGTTCATGGAT | + |
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Preference number: 5 (lower is better) Translates to: LRVCFHGAFLSFIHL*QLVIILQCLLKFMD Trigger: ATCCATGAACTTCAACAGACATTGGAGAATGATGACAAGCTGTCAGAGGTGGATGAAGCTCAAGAAAGCACCATGGAAGCAGACCCTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR CAA 90 bp | CAGCTTGTCATCATTCTCCAATGTCTGTTGAAGTTCATGGATGGTACTAAGAAGAGTGCTCAGCATGCGTaGGTACTGGCTATACCCTTC | + |
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Preference number: 5 (lower is better) Translates to: QLVIILQCLLKFMDGTKKSAQHA*VLAIPF Trigger: GAAGGGTATAGCCAGTACCAACGCATGCTGAGCACT...CTTCTTAGTACCATCCATGAACTTCAACAGACATTGGAGAATGATGACAAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225559.2 |
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| CDS-3UTR CAA 90 bp | GTACAACACACTGAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATAAGAAGAACGTGAAATaGTTTCCGTCTCAATTCCAG | + |
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Preference number: 5 (lower is better) Translates to: VQHTEPRKPMQLFAVPVNKKNVK*FPSQFQ Trigger: CTGGAATTGAGACGGAAACAATTTCACGTTCTTCTT...ATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS CCA 90 bp | TTCATATCATATACCAGCAATGTTTTGCCCATTGAAAATTCACACTaGGACAGAGTGCTCAGCATGCGTTGGTACTGGCTATACCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: FISYTSNVLPIENSH*DRVLSMRWYWLYPS Trigger: GGAAGGGTATAGCCAGTACCAACGCATGCTGAGCACTCTGTCCCAGTGTGAATTTTCAATGGGCAAAACATTGCTGGTATATGATATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 ENSMUST00000225559.2 |
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| CDS-3UTR CAA 90 bp | GTACAACACACTGAACCCAGGAAGCCCATGCAGCTATTCGCTGTCCCTGTAAATTATACCAGCAATGTTTaGCCCATTGAAAATTCACAC | + |
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Preference number: 5 (lower is better) Translates to: VQHTEPRKPMQLFAVPVNYTSNV*PIENSH Trigger: GTGTGAATTTTCAATGGGCAAAACATTGCTGGTATA...ATTTACAGGGACAGCGAATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR CAA 90 bp | GTTGAAATATCCCAAAAGTACAACACACTGAACCCAGGAAGCCCATGCAGCTATTCTTGGGATCCAGAGTaGCACCATTTAATGAAGCTT | + |
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Preference number: 5 (lower is better) Translates to: VEISQKYNTLNPGSPCSYSWDPE*HHLMKL Trigger: AAGCTTCATTAAATGGTGCAACTCTGGATCCCAAGA...ATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTGTACTTTTGGGATATTTCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS-3UTR CAA 90 bp | CCTCTGACAGCTTGTCATCATTCTCCAATGTCTGTTGAAGTTCATGGATGGTACTCTTGGGATCCAGAGTaGCACCATTTAATGAAGCTT | + |
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Preference number: 5 (lower is better) Translates to: PLTACHHSPMSVEVHGWYSWDPE*HHLMKL Trigger: AAGCTTCATTAAATGGTGCAACTCTGGATCCCAAGA...GTACCATCCATGAACTTCAACAGACATTGGAGAATGATGACAAGCTGTCAGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225559.2 |
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| CDS-3UTR CAA 90 bp | AATATCCCAAAAGTACAACACACTGAACCCAGGAAGCCCATGCAGCTATTCGCTATTCTCCAATGTCTGTaGAAGTTCATGGATGGTACT | + |
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Preference number: 5 (lower is better) Translates to: NIPKVQHTEPRKPMQLFAILQCL*KFMDGT Trigger: AGTACCATCCATGAACTTCAACAGACATTGGAGAAT...AGCGAATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTGTACTTTTGGGATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS TCA 90 bp | CATTTCTCTGAGATTCATATCATATACCAGCAATGTTTTGCCCATTaGAAATTCACACTGGGACAGAGTGCTCAGCATGCGTTGGTACTG | + |
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Preference number: 5 (lower is better) Translates to: HFSEIHIIYQQCFAH*KFTLGQSAQHALVL Trigger: CAGTACCAACGCATGCTGAGCACTCTGTCCCAGTGTGAATTTTCAATGGGCAAAACATTGCTGGTATATGATATGAATCTCAGAGAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 ENSMUST00000225559.2 ENSMUST00000225891.2 |
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| CDS-3UTR CAA 90 bp | GTTGAAATATCCCAAAAGTACAACACACTGAACCCAGGAAGCCCATGCAGCTATAAGAAGAACGTGAAATaGTTTCCGTCTCAATTCCAG | + |
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Preference number: 5 (lower is better) Translates to: VEISQKYNTLNPGSPCSYKKNVK*FPSQFQ Trigger: CTGGAATTGAGACGGAAACAATTTCACGTTCTTCTT...ATAGCTGCATGGGCTTCCTGGGTTCAGTGTGTTGTACTTTTGGGATATTTCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS GCA 90 bp | CTCAATTCCAGCTTATCTTCAACACTTTCTTTAATATGTGAGAGATaGTCTAATTCTTTGCCCAGAGCCTCTAGCTCCTTCAGTGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: LNSSLSSTLSLICER*SNSLPRASSSFSVS Trigger: TGAGACACTGAAGGAGCTAGAGGCTCTGGGCAAAGAATTAGAGCATCTCTCACATATTAAAGAAAGTGTTGAAGATAAGCTGGAATTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 ENSMUST00000225891.2 |
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| CDS CCA 90 bp | TTCATATCATATACCAGCAATGTTTTGCCCATTGAAAATTCACACTaGGACAGAGTGCTCAGCATGCGTTGGTACTGGCTATACCATTTA | + |
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Preference number: 5 (lower is better) Translates to: FISYTSNVLPIENSH*DRVLSMRWYWLYHL Trigger: TAAATGGTATAGCCAGTACCAACGCATGCTGAGCACTCTGTCCCAGTGTGAATTTTCAATGGGCAAAACATTGCTGGTATATGATATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225891.2 |
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| CDS-3UTR CAA 90 bp | CTCCAATGTCTGTTGAAGTTCATGGATGGTACTAAGAAGAACGTGAAATTGTTTTATACCAGCAATGTTTaGCCCATTGAAAATTCACAC | + |
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Preference number: 5 (lower is better) Translates to: LQCLLKFMDGTKKNVKLFYTSNV*PIENSH Trigger: GTGTGAATTTTCAATGGGCAAAACATTGCTGGTATA...AAACAATTTCACGTTCTTCTTAGTACCATCCATGAACTTCAACAGACATTGGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225559.2 |
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| CDS TCA 72 bp | GCCTCTAGCTCCTTCAGTGTCTCATGCCTGTCTGGGTaGTGCTGGATCACTTTGGCCAAAGCGTCATATTCT | + |
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Preference number: 6 (lower is better) Translates to: ASSSFSVSCLSG*CWITLAKASYS Trigger: AGAATATGACGCTTTGGCCAAAGTGATCCAGCATCACCCAGACAGGCATGAGACACTGAAGGAGCTAGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 ENSMUST00000225891.2 |
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| CDS CCA 72 bp | GAAAATTCACACTGGGACAGAGTGCTCAGCATGCGTTaGTACTGGCTATACCCTTCCTCTTGGGATCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: ENSHWDRVLSMR*YWLYPSSWDPE Trigger: CTCTGGATCCCAAGAGGAAGGGTATAGCCAGTACCAACGCATGCTGAGCACTCTGTCCCAGTGTGAATTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 ENSMUST00000225559.2 |
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| CDS GCA 72 bp | CCATTGAAAATTCACACTGGGACAGAGTGCTCAGCATaGGTTGGTACTGGCTATACCCTTCCTCTTGGGATC | + |
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Preference number: 6 (lower is better) Translates to: PLKIHTGTECSA*VGTGYTLPLGI Trigger: GATCCCAAGAGGAAGGGTATAGCCAGTACCAACGCATGCTGAGCACTCTGTCCCAGTGTGAATTTTCAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 ENSMUST00000225559.2 |
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| CDS GCA 72 bp | ATGTTTTGCCCATTGAAAATTCACACTGGGACAGAGTaGTCAGCATGCGTTGGTACTGGCTATACCCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: MFCPLKIHTGTE*SACVGTGYTLP Trigger: AGGAAGGGTATAGCCAGTACCAACGCATGCTGAGCACTCTGTCCCAGTGTGAATTTTCAATGGGCAAAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 ENSMUST00000225559.2 |
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| CDS CAA 90 bp | AGCATGCGTTGGTACTGGCTATACCCTTCCTCTTGGGATCCAGAGTaGCACCATTTAATGAAGCTTTTCACGAGGAGATTAATTCTCCGA | + |
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Preference number: 6 (lower is better) Translates to: SMRWYWLYPSSWDPE*HHLMKLFTRRLILR Trigger: TCGGAGAATTAATCTCCTCGTGAAAAGCTTCATTAAATGGTGCAACTCTGGATCCCAAGAGGAAGGGTATAGCCAGTACCAACGCATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 ENSMUST00000225559.2 |
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| CDS TCA 72 bp | TGCTTCCATGGTGCTTTCTTGAGCTTCATCCACCTCTaGCAGCTTGTCATCATTCTCCAATGTCTGTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: CFHGAFLSFIHL*QLVIILQCLLK Trigger: CTTCAACAGACATTGGAGAATGATGACAAGCTGTCAGAGGTGGATGAAGCTCAAGAAAGCACCATGGAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 |
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| CDS CCA 72 bp | TATACCAGCAATGTTTTGCCCATTGAAAATTCACACTaGGACAGAGTGCTCAGCATGCGTTGGTACTGGCTA | + |
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Preference number: 6 (lower is better) Translates to: YTSNVLPIENSH*DRVLSMRWYWL Trigger: TAGCCAGTACCAACGCATGCTGAGCACTCTGTCCCAGTGTGAATTTTCAATGGGCAAAACATTGCTGGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 ENSMUST00000225559.2 ENSMUST00000225891.2 |
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| CDS CCA 72 bp | GAAAATTCACACTGGGACAGAGTGCTCAGCATGCGTTaGTACTGGCTATACCATTTAATGAAGCTTTTCACG | + |
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Preference number: 6 (lower is better) Translates to: ENSHWDRVLSMR*YWLYHLMKLFT Trigger: CGTGAAAAGCTTCATTAAATGGTATAGCCAGTACCAACGCATGCTGAGCACTCTGTCCCAGTGTGAATTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225891.2 |
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| CDS CAA 72 bp | TGGTACTGGCTATACCCTTCCTCTTGGGATCCAGAGTaGCACCATTTAATGAAGCTTTTCACGAGGAGATTA | + |
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Preference number: 6 (lower is better) Translates to: WYWLYPSSWDPE*HHLMKLFTRRL Trigger: TAATCTCCTCGTGAAAAGCTTCATTAAATGGTGCAACTCTGGATCCCAAGAGGAAGGGTATAGCCAGTACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065865.10 ENSMUST00000225325.2 ENSMUST00000225559.2 |
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