Pregenerated sensors for THOC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037475Ensembl transcript IDs: ENSMUST00000047037.15, ENSMUST00000124458.8, ENSMUST00000129915.8, ENSMUST00000131259.2, ENSMUST00000145586.8, ENSMUST00000151430.8, ENSMUST00000152921.2
Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AATATAAAACCTCCAGTGGCTCCAGTGAAAACTTGGCACAAGACTTaGAGGAAGTCAGGACATTGGTATTCCAAACAGGTGAGCCTAATA | + |
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Preference number: 1 (lower is better) Translates to: NIKPPVAPVKTWHKT*RKSGHWYSKQVSLI Trigger: TATTAGGCTCACCTGTTTGGAATACCAATGTCCTGACTTCCTTCAAGTCTTGTGCCAAGTTTTCACTGGAGCCACTGGAGGTTTTATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
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| 3UTR TCA 90 bp | AAATGGAACTCCTTTCAAGATTCCTTCTTAGAAGGCACATCGGTATaGTGCTCATCAAGAAGCTTGATAAATTCAGAGGTATCTTGTTTA | + |
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Preference number: 1 (lower is better) Translates to: KWNSFQDSFLEGTSV*CSSRSLINSEVSCL Trigger: TAAACAAGATACCTCTGAATTTATCAAGCTTCTTGATGAGCATCATACCGATGTGCCTTCTAAGAAGGAATCTTGAAAGGAGTTCCATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
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| 3UTR TCA 90 bp | GTGAATTCTATCAATAACAAAGACCTGGAGGATGTTCCCAGAAAATaGGGAAATATTTCTGTGTCTCTGTCTATTCTTAGAAACCATTCA | + |
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Preference number: 1 (lower is better) Translates to: VNSINNKDLEDVPRK*GNISVSLSILRNHS Trigger: TGAATGGTTTCTAAGAATAGACAGAGACACAGAAATATTTCCTCATTTTCTGGGAACATCCTCCAGGTCTTTGTTATTGATAGAATTCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| 3UTR-3UTR CCA 90 bp | CATTCTCCTCTTTCCGCCTCTTTGTTATGTCCGGTGGCACTTCGCGGTCATTGTGCAGTGAGGCACTTCTaGGTAAAATTTCTCTTGCAC | + |
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Preference number: 2 (lower is better) Translates to: HSPLSASLLCPVALRGHCAVRHF*VKFLLH Trigger: GTGCAAGAGAAATTTTACCCAGAAGTGCCTCACTGC...ACAATGACCGCGAAGTGCCACCGGACATAACAAAGAGGCGGAAAGAGGAGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
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| 3UTR CAA 90 bp | TGTGTTTTGAAACCCCCATTGTTCCATTCTCCTCTTTCCGCCTCTTaGTTATGTCCGGTGGCACTTCGCGGTCATTGTTTGAATGATCCC | + |
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Preference number: 2 (lower is better) Translates to: CVLKPPLFHSPLSAS*LCPVALRGHCLNDP Trigger: GGGATCATTCAAACAATGACCGCGAAGTGCCACCGGACATAACAAAGAGGCGGAAAGAGGAGAATGGAACAATGGGGGTTTCAAAACACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTCTTGTCCATTTCTCTCTCCTTACTCTTGGACAGTGGTGGAGGGTTATGGTACTTGGCACAAGACTTaGAGGAAGTCAGGACATTGG | + |
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Preference number: 2 (lower is better) Translates to: LSCPFLSPYSWTVVEGYGTWHKT*RKSGHW Trigger: CCAATGTCCTGACTTCCTTCAAGTCTTGTGCCAAGT...ACCATAACCCTCCACCACTGTCCAAGAGTAAGGAGAGAGAAATGGACAAGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCCTCTTTCCGCCTCTTTGTTATGTCCGGTGGCACTTCGCGGTCATTGTTTGGATCATGTCATACTATaGGAATTCCTTAAGGACAAG | + |
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Preference number: 2 (lower is better) Translates to: SPLSASLLCPVALRGHCLDHVIL*EFLKDK Trigger: CTTGTCCTTAAGGAATTCTCATAGTATGACATGATC...CAAACAATGACCGCGAAGTGCCACCGGACATAACAAAGAGGCGGAAAGAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
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| 3UTR-3UTR TCA 90 bp | GTAACTGAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAGTGGCTGAGGGAAAATaGGGAGGAAGGCCAAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: VTENGPASFTILRNLLRKVAEGK*GGRPKQ Trigger: TTGCTTTGGCCTTCCTCCTCATTTTCCCTCAGCCAC...TTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTCAGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCACATCGGTATGATGCTCATCAAGAAGCTTGATAAATTCAGAGGTATCTTGCTCCAGTGGCTCCAGTaGAAACTTGGCACAAGACTT | + |
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Preference number: 2 (lower is better) Translates to: RHIGMMLIKKLDKFRGILLQWLQ*KLGTRL Trigger: AAGTCTTGTGCCAAGTTTTCACTGGAGCCACTGGAG...CAAGATACCTCTGAATTTATCAAGCTTCTTGATGAGCATCATACCGATGTGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
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| 3UTR-3UTR CCA 90 bp | CATTCTCCTCTTTCCGCCTCTTTGTTATGTCCGGTGGCACTTCGCGGTCATTGTAAGGAGACTTTAAAATaGAACTCCTTTCAAGATTCC | + |
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Preference number: 2 (lower is better) Translates to: HSPLSASLLCPVALRGHCKETLK*NSFQDS Trigger: GGAATCTTGAAAGGAGTTCCATTTTAAAGTCTCCTT...ACAATGACCGCGAAGTGCCACCGGACATAACAAAGAGGCGGAAAGAGGAGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
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| 3UTR CAA 90 bp | CAATATAAAACCTCCAGTGGCTCCAGTGAAAACTTGGCACAAGACTaGAAGGAAGTCAGGACATTGGTATTCCAAACAGGTGAGCCTAAT | + |
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Preference number: 2 (lower is better) Translates to: QYKTSSGSSENLAQD*KEVRTLVFQTGEPN Trigger: ATTAGGCTCACCTGTTTGGAATACCAATGTCCTGACTTCCTTCAAGTCTTGTGCCAAGTTTTCACTGGAGCCACTGGAGGTTTTATATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
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| 3UTR-3UTR TCA 90 bp | AAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATGTGGCTGAGGGAAAATaGGGAGGAAGGCCAAAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: KMGPLHSQFSEIYSGKYNVAEGK*GGRPKQ Trigger: TTGCTTTGGCCTTCCTCCTCATTTTCCCTCAGCCAC...ATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCAACTCTGTATAAAGACGATGGCGTCTCACCACTTGGTTCCTGGTAAAACTTTGAATCCAAGAATATaGCACAGTGTTTGTGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: LQLCIKTMASHHLVPGKTLNPRI*HSVCGS Trigger: TGAGCCACAAACACTGTGTCATATTCTTGGATTCAA...AGTTTTACCAGGAACCAAGTGGTGAGACGCCATCGTCTTTATACAGAGTTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129915.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCAACTCTGTATAAAGACGATGGCGTCTCACCACTTGGTTCCTGGTAAAACTGACTTTTGGTTGAACTaGTGTGACTGTTTGATAAGC | + |
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Preference number: 2 (lower is better) Translates to: LQLCIKTMASHHLVPGKTDFWLN*CDCLIS Trigger: GCTTATCAAACAGTCACAGCAGTTCAACCAAAAGTC...AGTTTTACCAGGAACCAAGTGGTGAGACGCCATCGTCTTTATACAGAGTTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129915.8 |
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| 3UTR-3UTR GCA 90 bp | AAAAGGAAGCATTTCAAATGGGGGAAGGGACTTGAAACCCAGGCAGTATTTAATTTTTCCTTTAGATGCTaGTTCTGGATGGTGTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: KRKHFKWGKGLETQAVFNFSFRC*FWMVCP Trigger: GGGACACACCATCCAGAAGCAGCATCTAAAGGAAAA...ATTAAATACTGCCTGGGTTTCAAGTCCCTTCCCCCATTTGAAATGCTTCCTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAACTATGTGTGAGAGGATaGAAGGATTCTGGGGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: ENGPASFTILRNLLRKIQLCVRG*KDSGVE Trigger: CTCTACCCCAGAATCCTTCCATCCTCTCACACATAG...TTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATCACTCTCTCCTTACTCTTaGACAGTGGTGGAGGGTTAT | + |
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Preference number: 2 (lower is better) Translates to: PNVFTLTEFTHKGNLSTSLSPYS*TVVEGY Trigger: ATAACCCTCCACCACTGTCCAAGAGTAAGGAGAGAG...TGATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
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| 3UTR-3UTR GCA 90 bp | ACAAAGACCTGGAGGATGTTCCCAGAAAATGAGGAAATATTTCTGTGTCTCTGTGTTCTGAGATTAGACTaGACCACACAGTCAATGTAC | + |
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Preference number: 2 (lower is better) Translates to: TKTWRMFPENEEIFLCLCVLRLD*TTQSMY Trigger: GTACATTGACTGTGTGGTGCAGTCTAATCTCAGAAC...ACAGAGACACAGAAATATTTCCTCATTTTCTGGGAACATCCTCCAGGTCTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAAGACCTGGAGGATGTTCCCAGAAAATGAGGAAATATTTCTGTGTCTCTGTGATGCTGCTTCTGGATaGTGTGTCCCACATAAAATT | + |
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Preference number: 2 (lower is better) Translates to: TKTWRMFPENEEIFLCLCDAASG*CVPHKI Trigger: AATTTTATGTGGGACACACCATCCAGAAGCAGCATC...ACAGAGACACAGAAATATTTCCTCATTTTCTGGGAACATCCTCCAGGTCTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAAGACCTGGAGGATGTTCCCAGAAAATGAGGAAATATTTCTGTGTCTCTGTGTCAGTAGCTTCCAGTaGCTGAAGAAAGAAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: TKTWRMFPENEEIFLCLCVSSFQ*LKKEEK Trigger: TTTCTCTTCTTTCTTCAGCCACTGGAAGCTACTGAC...ACAGAGACACAGAAATATTTCCTCATTTTCTGGGAACATCCTCCAGGTCTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAAGACCTGGAGGATGTTCCCAGAAAATGAGGAAATATTTCTGTGTCTCTGTATGCTATACCATGGATaGCTCTTGATAACAAGATGG | + |
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Preference number: 2 (lower is better) Translates to: TKTWRMFPENEEIFLCLCMLYHG*LLITRW Trigger: CCATCTTGTTATCAAGAGTCATCCATGGTATAGCAT...ACAGAGACACAGAAATATTTCCTCATTTTCTGGGAACATCCTCCAGGTCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAGGAAGCATTTCAAATGGGGGAAGGGACTTGAAACCCAGGCAGTATTTAATAACATTTTCTATGTGTaGGAGGATGGAAGGATTCTG | + |
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Preference number: 2 (lower is better) Translates to: KRKHFKWGKGLETQAVFNNIFYV*EDGRIL Trigger: CAGAATCCTTCCATCCTCTCACACATAGAAAATGTT...ATTAAATACTGCCTGGGTTTCAAGTCCCTTCCCCCATTTGAAATGCTTCCTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTTTTTGCCACCAGATGAGATTTTATCCATCTTCTCAGACTTAAACGAATCATTCGCGGTCATTGTTTaGATGATCCCTTTTCCGTTC | + |
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Preference number: 2 (lower is better) Translates to: SFLPPDEILSIFSDLNESFAVIV*MIPFPF Trigger: GAACGGAAAAGGGATCATTCAAACAATGACCGCGAA...TGATTCGTTTAAGTCTGAGAAGATGGATAAAATCTCATCTGGTGGCAAAAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
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| 3UTR-3UTR GCA 90 bp | AAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATTTTTCCTTTAGATGCTaGTTCTGGATGGTGTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: KMGPLHSQFSEIYSGKYNFSFRC*FWMVCP Trigger: GGGACACACCATCCAGAAGCAGCATCTAAAGGAAAA...ATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| 3UTR-3UTR GCA 90 bp | ATAATCACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATTTTTCCTTTAGATGCTaGTTCTGGATGGTGTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: IITPMFSHLQNSHTKATYFSFRC*FWMVCP Trigger: GGGACACACCATCCAGAAGCAGCATCTAAAGGAAAA...ATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGTGATTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000151430.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATGATGCTGCTTCTGGATaGTGTGTCCCACATAAAATT | + |
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Preference number: 2 (lower is better) Translates to: TPMFSHLQNSHTKATYLHDAASG*CVPHKI Trigger: AATTTTATGTGGGACACACCATCCAGAAGCAGCATC...ATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000151430.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATGTCAGTAGCTTCCAGTaGCTGAAGAAAGAAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: TPMFSHLQNSHTKATYLHVSSFQ*LKKEEK Trigger: TTTCTCTTCTTTCTTCAGCCACTGGAAGCTACTGAC...ATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| 3UTR-3UTR TCA 90 bp | GTAACTGAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAGATCATGTCATACTATaGGAATTCCTTAAGGACAAG | + |
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Preference number: 2 (lower is better) Translates to: VTENGPASFTILRNLLRKDHVIL*EFLKDK Trigger: CTTGTCCTTAAGGAATTCTCATAGTATGACATGATC...TTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTCAGTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAGGAAGCATTTCAAATGGGGGAAGGGACTTGAAACCCAGGCAGTATTTAATATGGGGTCTCAATTATaGTCATGTCATACTATGAGA | + |
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Preference number: 2 (lower is better) Translates to: KRKHFKWGKGLETQAVFNMGSQL*SCHTMR Trigger: TCTCATAGTATGACATGATCATAATTGAGACCCCAT...ATTAAATACTGCCTGGGTTTCAAGTCCCTTCCCCCATTTGAAATGCTTCCTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| 3UTR-3UTR TCA 90 bp | AAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATGTAGCTTCCAGTGGCTaGAGAAAGAAGAGAAATAAG | + |
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Preference number: 2 (lower is better) Translates to: KMGPLHSQFSEIYSGKYNVASSG*RKKRNK Trigger: CTTATTTCTCTTCTTTCTTCAGCCACTGGAAGCTAC...ATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAGGAAGCATTTCAAATGGGGGAAGGGACTTGAAACCCAGGCAGTATTTAATGATGTTCCCAGAAAATaGGGAAATATTTCTGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: KRKHFKWGKGLETQAVFNDVPRK*GNISVS Trigger: AGACACAGAAATATTTCCTCATTTTCTGGGAACATC...ATTAAATACTGCCTGGGTTTCAAGTCCCTTCCCCCATTTGAAATGCTTCCTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| 3UTR-3UTR GCA 90 bp | ACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATGAATTTTCCTTTAGATaGTGCTTCTGGATGGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: TPMFSHLQNSHTKATYLHEFSFR*CFWMVC Trigger: ACACACCATCCAGAAGCAGCATCTAAAGGAAAATTC...ATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000151430.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATGTCTTGTCAAAAGGATaGTGGTATGTATGCATCTTC | + |
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Preference number: 2 (lower is better) Translates to: TPMFSHLQNSHTKATYLHVLSKG*WYVCIF Trigger: GAAGATGCATACATACCACCATCCTTTTGACAAGAC...ATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000151430.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAAGACCTGGAGGATGTTCCCAGAAAATGAGGAAATATTTCTGTGTCTCTGTACACATGCTATACCATaGATGACTCTTGATAACAAG | + |
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Preference number: 2 (lower is better) Translates to: TKTWRMFPENEEIFLCLCTHAIP*MTLDNK Trigger: CTTGTTATCAAGAGTCATCCATGGTATAGCATGTGT...ACAGAGACACAGAAATATTTCCTCATTTTCTGGGAACATCCTCCAGGTCTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| 3UTR CAA 90 bp | TTTGTCTTGATTTTAACTGACTTTTGGTTGAACTGCTGTGACTGTTaGATAAGCCCTAATGATTCCAAAGTTTCTGGATCCAATCGTTCC | + |
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Preference number: 2 (lower is better) Translates to: FVLILTDFWLNCCDC*ISPNDSKVSGSNRS Trigger: GGAACGATTGGATCCAGAAACTTTGGAATCATTAGGGCTTATCAAACAGTCACAGCAGTTCAACCAAAAGTCAGTTAAAATCAAGACAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129915.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATCAGATCATGTCATACTATaGGAATTCCTTAAGGACAAG | + |
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Preference number: 2 (lower is better) Translates to: PNVFTLTEFTHKGNLSTSDHVIL*EFLKDK Trigger: CTTGTCCTTAAGGAATTCTCATAGTATGACATGATC...TGATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000151430.8 |
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| 3UTR-3UTR TCA 90 bp | TCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGAACATTTTCTATGTGTaGGAGGATGGAAGGATTCTG | + |
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Preference number: 2 (lower is better) Translates to: SFTILRNLLRKIQFRSQLNIFYV*EDGRIL Trigger: CAGAATCCTTCCATCCTCTCACACATAGAAAATGTT...CAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGAATGGATTATTGACACATGCTATACCATGGATGACTCTTGATAACAAGGTCTTGTCAAAAGGATaGTGGTATGTATGCATCTTC | + |
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Preference number: 2 (lower is better) Translates to: RRNGLLTHAIPWMTLDNKVLSKG*WYVCIF Trigger: GAAGATGCATACATACCACCATCCTTTTGACAAGAC...CTTGTTATCAAGAGTCATCCATGGTATAGCATGTGTCAATAATCCATTCCTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTTTTTGCCACCAGATGAGATTTTATCCATCTTCTCAGACTTAAACGAATCAGTCTTGTCAAAAGGATaGTGGTATGTATGCATCTTC | + |
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Preference number: 2 (lower is better) Translates to: SFLPPDEILSIFSDLNESVLSKG*WYVCIF Trigger: GAAGATGCATACATACCACCATCCTTTTGACAAGAC...TGATTCGTTTAAGTCTGAGAAGATGGATAAAATCTCATCTGGTGGCAAAAAGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAGGAATGGATTATTGACACATGCTATACCATGGATGACTCTTGATAACAAGATGGGGTCTCAATTATaGTCATGTCATACTATGAGA | + |
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Preference number: 2 (lower is better) Translates to: RRNGLLTHAIPWMTLDNKMGSQL*SCHTMR Trigger: TCTCATAGTATGACATGATCATAATTGAGACCCCAT...CTTGTTATCAAGAGTCATCCATGGTATAGCATGTGTCAATAATCCATTCCTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| 3UTR-3UTR GCA 90 bp | ACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGTATGATGAATTTTCCTTTAGATaGTGCTTCTGGATGGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: TILRNLLRKIQFRSQLYDEFSFR*CFWMVC Trigger: ACACACCATCCAGAAGCAGCATCTAAAGGAAAATTC...ATCATACAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| 3UTR-3UTR CCA 90 bp | TCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGTCAATAACAAAGACCTaGAGGATGTTCCCAGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: SFTILRNLLRKIQFRSQLSITKT*RMFPEN Trigger: ATTTTCTGGGAACATCCTCCAGGTCTTTGTTATTGA...CAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| 3UTR CAA 90 bp | ATCGGTATGATGCTCATCAAGAAGCTTGATAAATTCAGAGGTATCTaGTTTATCCTGTATCATTCAGGAAGTCTTCAGTGCTATATAATC | + |
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Preference number: 2 (lower is better) Translates to: IGMMLIKKLDKFRGI*FILYHSGSLQCYII Trigger: GATTATATAGCACTGAAGACTTCCTGAATGATACAGGATAAACAAGATACCTCTGAATTTATCAAGCTTCTTGATGAGCATCATACCGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
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| 3UTR-3UTR CAA 90 bp | TCTTTCTTGTCCATTTCTCTCTCCTTACTCTTGGACAGTGGTGGAGGGTTATGGGTGACTCATGGAGCTTaGGCATCCTCCTCGGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SFLSISLSLLLDSGGGLWVTHGA*ASSSGN Trigger: GTTTCCCGAGGAGGATGCCAAAGCTCCATGAGTCAC...CCATAACCCTCCACCACTGTCCAAGAGTAAGGAGAGAGAAATGGACAAGAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCTCTTTCCGCCTCTTTGTTATGTCCGGTGGCACTTCGCGGTCATTGTTTGAAGGAAGTCAGGACATaGGTATTCCAAACAGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SPLSASLLCPVALRGHCLKEVRT*VFQTGE Trigger: CTCACCTGTTTGGAATACCAATGTCCTGACTTCCTT...CAAACAATGACCGCGAAGTGCCACCGGACATAACAAAGAGGCGGAAAGAGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAATGTCTTGTCAAAAGGATGGTGGTATGTATGCATCTTCTGACTTAAAGCAGGTGACTCATGGAGCTTaGGCATCCTCCTCGGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: GMSCQKDGGMYASSDLKQVTHGA*ASSSGN Trigger: GTTTCCCGAGGAGGATGCCAAAGCTCCATGAGTCAC...CTGCTTTAAGTCAGAAGATGCATACATACCACCATCCTTTTGACAAGACATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000145586.8 ENSMUST00000151430.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCTCTTTCCGCCTCTTTGTTATGTCCGGTGGCACTTCGCGGTCATTGTTTGTACATCATTAAGGAATaGCTTCCAGGAGGCAATTTC | + |
|
Preference number: 3 (lower is better) Translates to: SPLSASLLCPVALRGHCLYIIKE*LPGGNF Trigger: GAAATTGCCTCCTGGAAGCAATTCCTTAATGATGTA...CAAACAATGACCGCGAAGTGCCACCGGACATAACAAAGAGGCGGAAAGAGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATCAGTGACTCATGGAGCTTaGGCATCCTCCTCGGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: PNVFTLTEFTHKGNLSTSVTHGA*ASSSGN Trigger: GTTTCCCGAGGAGGATGCCAAAGCTCCATGAGTCAC...TGATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000151430.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATGTATGCACGGGGACCTaGTTCCAAGAAACTGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TPMFSHLQNSHTKATYLHVCTGT*FQETAC Trigger: GCAGGCAGTTTCTTGGAACAAGGTCCCCGTGCATAC...ATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000151430.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATGTGACTCATGGAGCTTaGGCATCCTCCTCGGGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: KMGPLHSQFSEIYSGKYNVTHGA*ASSSGN Trigger: GTTTCCCGAGGAGGATGCCAAAGCTCCATGAGTCAC...ATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTTTTGCCACCAGATGAGATTTTATCCATCTTCTCAGACTTAAACGAATCAGGCTCCAGTGAAAACTaGGCACAAGACTTGAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SFLPPDEILSIFSDLNESGSSEN*AQDLKE Trigger: TTCCTTCAAGTCTTGTGCCAAGTTTTCACTGGAGCC...TGATTCGTTTAAGTCTGAGAAGATGGATAAAATCTCATCTGGTGGCAAAAAGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAACTGAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAATACATCATTAAGGAATaGCTTCCAGGAGGCAATTTC | + |
|
Preference number: 3 (lower is better) Translates to: VTENGPASFTILRNLLRKYIIKE*LPGGNF Trigger: GAAATTGCCTCCTGGAAGCAATTCCTTAATGATGTA...TTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTCAGTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTTTTGCCACCAGATGAGATTTTATCCATCTTCTCAGACTTAAACGAATCAAACTTGGCACAAGACTaGAAGGAAGTCAGGACATTG | + |
|
Preference number: 3 (lower is better) Translates to: SFLPPDEILSIFSDLNESNLAQD*KEVRTL Trigger: CAATGTCCTGACTTCCTTCAAGTCTTGTGCCAAGTT...TGATTCGTTTAAGTCTGAGAAGATGGATAAAATCTCATCTGGTGGCAAAAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATTGCCTGGATTCCTTTTaGCCACCAGATGAGATTTTA | + |
|
Preference number: 3 (lower is better) Translates to: TPMFSHLQNSHTKATYLHCLDSF*PPDEIL Trigger: TAAAATCTCATCTGGTGGCAAAAAGGAATCCAGGCA...ATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
||
| 3UTR CCA 72 bp | ACTACAGGAGAACTGATCACCAAGGAGACTTTAAAATaGAACTCCTTTCAAGATTCCTTCTTAGAAGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: TTGELITKETLK*NSFQDSFLEGT Trigger: TGTGCCTTCTAAGAAGGAATCTTGAAAGGAGTTCCATTTTAAAGTCTCCTTGGTGATCAGTTCTCCTGTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATCAAGAAGGAATGGATTATaGACACATGCTATACCATGG | + |
|
Preference number: 3 (lower is better) Translates to: PNVFTLTEFTHKGNLSTSRRNGL*THAIPW Trigger: CCATGGTATAGCATGTGTCAATAATCCATTCCTTCT...TGATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAAAGAAGGAATGGATTATaGACACATGCTATACCATGG | + |
|
Preference number: 3 (lower is better) Translates to: ENGPASFTILRNLLRKIQRRNGL*THAIPW Trigger: CCATGGTATAGCATGTGTCAATAATCCATTCCTTCT...TTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| 3UTR-3UTR CAA 90 bp | AGATCATCTAGATCAATGAGATTAAATTGCAGGAGGACTGCTGCAACTCTGTATTTAACTGACTTTTGGTaGAACTGCTGTGACTGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: RSSRSMRLNCRRTAATLYLTDFW*NCCDCL Trigger: CAAACAGTCACAGCAGTTCAACCAAAAGTCAGTTAA...ATACAGAGTTGCAGCAGTCCTCCTGCAATTTAATCTCATTGATCTAGATGATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129915.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATCATCTCACTTTTGTGTTTaGAAACCCCCATTGTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PNVFTLTEFTHKGNLSTSSHFCV*KPPLFH Trigger: ATGGAACAATGGGGGTTTCAAAACACAAAAGTGAGA...TGATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
||
| 3UTR TCA 72 bp | TCCTTTCAAGATTCCTTCTTAGAAGGCACATCGGTATaGTGCTCATCAAGAAGCTTGATAAATTCAGAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SFQDSFLEGTSV*CSSRSLINSEV Trigger: TACCTCTGAATTTATCAAGCTTCTTGATGAGCATCATACCGATGTGCCTTCTAAGAAGGAATCTTGAAAGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
||
| 3UTR-3UTR CAA 90 bp | ATAATCACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATGCTGAAAAGATTCATTaGCTTGTAGCTACCATTGCA | + |
|
Preference number: 3 (lower is better) Translates to: IITPMFSHLQNSHTKATYAEKIH*LVATIA Trigger: TGCAATGGTAGCTACAAGCAAATGAATCTTTTCAGC...ATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGTGATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATCACTTTGTCTTTCTCATTaGGATATTGAGACTCACATG | + |
|
Preference number: 3 (lower is better) Translates to: PNVFTLTEFTHKGNLSTSLCLSH*DIETHM Trigger: CATGTGAGTCTCAATATCCAAATGAGAAAGACAAAG...TGATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
||
| 3UTR TCA 72 bp | TTCTTTATCATGCCTGGATTCCTTTTTGCCACCAGATaGGATTTTATCCATCTTCTCAGACTTAAACGAATC | + |
|
Preference number: 3 (lower is better) Translates to: FFIMPGFLFATR*DFIHLLRLKRI Trigger: GATTCGTTTAAGTCTGAGAAGATGGATAAAATCTCATCTGGTGGCAAAAAGGAATCCAGGCATGATAAAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
||
| 3UTR GCA 72 bp | GTTGTACACATACTATATAAAACGATTCTTAGGCGTTaGATAAGACAGTGCTCCACTTTATTTTTAGTGACT | + |
|
Preference number: 3 (lower is better) Translates to: VVHILYKTILRR*IRQCSTLFLVT Trigger: AGTCACTAAAAATAAAGTGGAGCACTGTCTTATGCAACGCCTAAGAATCGTTTTATATAGTATGTGTACAAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| 3UTR CCA 72 bp | TTAAGAAGGAATGGATTATTGACACATGCTATACCATaGATGACTCTTGATAACAAGATGGTAGTTGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LRRNGLLTHAIP*MTLDNKMVVER Trigger: TCTTTCAACTACCATCTTGTTATCAAGAGTCATCCATGGTATAGCATGTGTCAATAATCCATTCCTTCTTAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| 3UTR CAA 72 bp | AAACCCCCATTGTTCCATTCTCCTCTTTCCGCCTCTTaGTTATGTCCGGTGGCACTTCGCGGTCATTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KPPLFHSPLSAS*LCPVALRGHCL Trigger: CAAACAATGACCGCGAAGTGCCACCGGACATAACAAAGAGGCGGAAAGAGGAGAATGGAACAATGGGGGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAGACCTGGAGGATGTTCCCAGAAAATGAGGAAATATTTCTGTGTCTCTGTCCCTCAGCCTTTAGCTaGTCCCCACCAGTCATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TKTWRMFPENEEIFLCLCPSAFS*SPPVMA Trigger: AGCCATGACTGGTGGGGAGCAGCTAAAGGCTGAGGG...ACAGAGACACAGAAATATTTCCTCATTTTCTGGGAACATCCTCCAGGTCTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR GCA 90 bp | GTAACTGAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAGTTCTTTATCCACTCTaGGGGAACCACCACAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VTENGPASFTILRNLLRKVLYPL*GNHHSR Trigger: GCGGCTGTGGTGGTTCCCGCAGAGTGGATAAAGAAC...TTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTCAGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR GCA 90 bp | TGGTTGAACTGCTGTGACTGTTTGATAAGCCCTAATGATTCCAAAGTTTCTGGAGTTCTTTATCCACTCTaGGGGAACCACCACAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: WLNCCDCLISPNDSKVSGVLYPL*GNHHSR Trigger: GCGGCTGTGGTGGTTCCCGCAGAGTGGATAAAGAAC...TCCAGAAACTTTGGAATCATTAGGGCTTATCAAACAGTCACAGCAGTTCAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129915.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCTCTTTCCGCCTCTTTGTTATGTCCGGTGGCACTTCGCGGTCATTGTTTGTTTGTCTTCTTTATTTaGCCGCTCTTCCTTCGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPLSASLLCPVALRGHCLFVFFI*PLFLRF Trigger: AAACCGAAGGAAGAGCGGCCAAATAAAGAAGACAAA...CAAACAATGACCGCGAAGTGCCACCGGACATAACAAAGAGGCGGAAAGAGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
||
| CDS-3UTR TCA 90 bp | GGAATGTCTTGTCAAAAGGATGGTGGTATGTATGCATCTTCTGACTTAAAGCAGGAGGCATCTGATCCATaGTGTTCTGTGCATGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GMSCQKDGGMYASSDLKQEASDP*CSVHAA Trigger: GGCAGCATGCACAGAACATCATGGATCAGATGCCTC...CTGCTTTAAGTCAGAAGATGCATACATACCACCATCCTTTTGACAAGACATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | GAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAACAAAGCGCTAACCGGTaGGCCCTTAGCACCTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ENGPASFTILRNLLRKIQQSANR*ALSTFR Trigger: CCTAAAGGTGCTAAGGGCTCACCGGTTAGCGCTTTG...TTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR GCA 90 bp | GTAACTGAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAGTGGCTCTATCACTATaGCACCTGGTCACCGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTENGPASFTILRNLLRKVALSL*HLVTVS Trigger: AGAGACGGTGACCAGGTGGCATAGTGATAGAGCCAC...TTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTCAGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CCA 90 bp | AAAAGGAAGCATTTCAAATGGGGGAAGGGACTTGAAACCCAGGCAGTATTTAATAAGTGCCCTGGCCTCTaGAGTTGTAGCTGGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KRKHFKWGKGLETQAVFNKCPGL*SCSWSL Trigger: AAGACTCCAGCTACAACTCCAGAGGCCAGGGCACTT...ATTAAATACTGCCTGGGTTTCAAGTCCCTTCCCCCATTTGAAATGCTTCCTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | CTGCAACTCTGTATAAAGACGATGGCGTCTCACCACTTGGTTCCTGGTAAAACTAAATTCGCCTCTCCCTaGTTTCTCCCAGTTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LQLCIKTMASHHLVPGKTKFASP*FLPVLY Trigger: ATAAAGAACTGGGAGAAATCAGGGAGAGGCGAATTT...AGTTTTACCAGGAACCAAGTGGTGAGACGCCATCGTCTTTATACAGAGTTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129915.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTGTCCATTTCTCTCTCCTTACTCTTGGACAGTGGTGGAGGGTTATGGTTATGTGATGGAGAAGGATaGCTATCAATTTTGCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: FLSISLSLLLDSGGGLWLCDGEG*LSILRR Trigger: ACGCCGCAAAATTGATAGTCATCCTTCTCCATCACA...TAACCATAACCCTCCACCACTGTCCAAGAGTAAGGAGAGAGAAATGGACAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAGCTCTTAAATATGGGAGATGTCATTCTGAGAGTGACTCATGGAGCTTTGACTATCTTTACCAAGTaGCCTGGCCTCTGGAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QKLLNMGDVILRVTHGALTIFTK*PGLWSC Trigger: ACAACTCCAGAGGCCAGGGCACTTGGTAAAGATAGT...CAAAGCTCCATGAGTCACTCTCAGAATGACATCTCCCATATTTAAGAGCTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000151430.8 |
||
| CDS-3UTR CCA 90 bp | TCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGGCTCCCCACCAGTCATaGCTTCTAACTGCTCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: SFTILRNLLRKIQFRSQLAPHQS*LLTAPS Trigger: CGATGGAGCAGTTAGAAGCCATGACTGGTGGGGAGC...CAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CCA 90 bp | CAGAAGCTCTTAAATATGGGAGATGTCATTCTGAGAGTGACTCATGGAGCTTTGGGCAACAGCATTCCTTaGAGGAGGATCCTTATGATG | + |
|
Preference number: 4 (lower is better) Translates to: QKLLNMGDVILRVTHGALGNSIP*RRILMM Trigger: CATCATAAGGATCCTCCTCCAAGGAATGCTGTTGCC...CAAAGCTCCATGAGTCACTCTCAGAATGACATCTCCCATATTTAAGAGCTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | GGCTCCAGTGAAAACTTGGCACAAGACTTGAAGGAAGTCAGGACATTGGTATTCTCTCTTTCCCTTTCTTaGGTCGATTTTGATTCTACG | + |
|
Preference number: 4 (lower is better) Translates to: GSSENLAQDLKEVRTLVFSLSLS*VDFDST Trigger: CGTAGAATCAAAATCGACTCAAGAAAGGGAAAGAGA...GAATACCAATGTCCTGACTTCCTTCAAGTCTTGTGCCAAGTTTTCACTGGAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAGCTCTTAAATATGGGAGATGTCATTCTGAGAGTGACTCATGGAGCTTTGTGTGATGGAGAAGGATaGCTATCAATTTTGCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QKLLNMGDVILRVTHGALCDGEG*LSILRR Trigger: ACGCCGCAAAATTGATAGTCATCCTTCTCCATCACA...CAAAGCTCCATGAGTCACTCTCAGAATGACATCTCCCATATTTAAGAGCTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000151430.8 |
||
| CDS-3UTR GCA 90 bp | GTAACTGAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAATGCTGTGGCTCAGCTTaGCAATTTGTCTTCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VTENGPASFTILRNLLRKCCGSA*QFVFLK Trigger: CTTCAGGAAGACAAATTGGCAAGCTGAGCCACAGCA...TTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTCAGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR GCA 90 bp | CAGAAGCTCTTAAATATGGGAGATGTCATTCTGAGAGTGACTCATGGAGCTTTGGTAGCCCATAGCCAATaGATAAAGATCTGGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QKLLNMGDVILRVTHGALVAHSQ*IKIWPL Trigger: AAGAGGCCAGATCTTTATGCATTGGCTATGGGCTAC...CAAAGCTCCATGAGTCACTCTCAGAATGACATCTCCCATATTTAAGAGCTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR GCA 90 bp | GGAATGTCTTGTCAAAAGGATGGTGGTATGTATGCATCTTCTGACTTAAAGCAGACTATCTTTACCAAGTaGCCTGGCCTCTGGAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GMSCQKDGGMYASSDLKQTIFTK*PGLWSC Trigger: ACAACTCCAGAGGCCAGGGCACTTGGTAAAGATAGT...CTGCTTTAAGTCAGAAGATGCATACATACCACCATCCTTTTGACAAGACATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000151430.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCCAGTGAAAACTTGGCACAAGACTTGAAGGAAGTCAGGACATTGGTATTCGATGACTATCAATTTTaGGGCGTTTTTGTTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSSENLAQDLKEVRTLVFDDYQF*GVFVPC Trigger: ACAGGGAACAAAAACGCCGCAAAATTGATAGTCATC...GAATACCAATGTCCTGACTTCCTTCAAGTCTTGTGCCAAGTTTTCACTGGAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
||
| CDS-3UTR CCA 90 bp | ATAATCACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATAAGTGCCCTGGCCTCTaGAGTTGTAGCTGGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IITPMFSHLQNSHTKATYKCPGL*SCSWSL Trigger: AAGACTCCAGCTACAACTCCAGAGGCCAGGGCACTT...ATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGTGATTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000151430.8 |
||
| CDS-3UTR CCA 90 bp | GTAACTGAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAACTCTCTCCTTACTCTTaGACAGTGGTGGAGGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: VTENGPASFTILRNLLRKLSPYS*TVVEGY Trigger: ATAACCCTCCACCACTGTCCAAGAGTAAGGAGAGAG...TTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTCAGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| 3UTR CAA 72 bp | ATGCAATATAAAACCTCCAGTGGCTCCAGTGAAAACTaGGCACAAGACTTGAAGGAAGTCAGGACATTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: MQYKTSSGSSEN*AQDLKEVRTLV Trigger: TACCAATGTCCTGACTTCCTTCAAGTCTTGTGCCAAGTTTTCACTGGAGCCACTGGAGGTTTTATATTGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
||
| CDS-3UTR TCA 90 bp | CTGCAACTCTGTATAAAGACGATGGCGTCTCACCACTTGGTTCCTGGTAAAACTGGCTTTTATTTTCACTaGGAATCCGGCATAAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: LQLCIKTMASHHLVPGKTGFYFH*ESGINV Trigger: TACATTTATGCCGGATTCTCAGTGAAAATAAAAGCC...AGTTTTACCAGGAACCAAGTGGTGAGACGCCATCGTCTTTATACAGAGTTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129915.8 |
||
| CDS-3UTR TCA 90 bp | GGAATGTCTTGTCAAAAGGATGGTGGTATGTATGCATCTTCTGACTTAAAGCAGGCATCGTGTGGTGTATaGAACTCATTACAGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: GMSCQKDGGMYASSDLKQASCGV*NSLQST Trigger: TGTGCTCTGTAATGAGTTTCATACACCACACGATGC...CTGCTTTAAGTCAGAAGATGCATACATACCACCATCCTTTTGACAAGACATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | ACAAAGACCTGGAGGATGTTCCCAGAAAATGAGGAAATATTTCTGTGTCTCTGTTTCGCGGTCATTGTTTaGATGATCCCTTTTCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TKTWRMFPENEEIFLCLCFAVIV*MIPFPF Trigger: GAACGGAAAAGGGATCATTCAAACAATGACCGCGAA...ACAGAGACACAGAAATATTTCCTCATTTTCTGGGAACATCCTCCAGGTCTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAGCTCTTAAATATGGGAGATGTCATTCTGAGAGTGACTCATGGAGCTTTGCTCTTCCTTTCCTCCTaGACTATCCCGTTTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QKLLNMGDVILRVTHGALLFLSS*TIPFFF Trigger: AAAGAAAAACGGGATAGTTCAGGAGGAAAGGAAGAG...CAAAGCTCCATGAGTCACTCTCAGAATGACATCTCCCATATTTAAGAGCTTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000145586.8 |
||
| CDS-3UTR GCA 90 bp | CTGCAACTCTGTATAAAGACGATGGCGTCTCACCACTTGGTTCCTGGTAAAACTCTAGATGCCTGTTCGTaGTTTAAATTCCCTTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: LQLCIKTMASHHLVPGKTLDACS*FKFPLM Trigger: CATTAAAGGGAATTTAAAGCACGAACAGGCATCTAG...AGTTTTACCAGGAACCAAGTGGTGAGACGCCATCGTCTTTATACAGAGTTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129915.8 |
||
| CDS-3UTR GCA 90 bp | AAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATGGTGCTCTCTTGTTTTaGAAAGCGCTAACCGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KMGPLHSQFSEIYSGKYNGALLF*KALTGE Trigger: CTCACCGGTTAGCGCTTTGCAAAACAAGAGAGCACC...ATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CCA 90 bp | AAAAGGAAGCATTTCAAATGGGGGAAGGGACTTGAAACCCAGGCAGTATTTAATCTCTGGAGTTGTAGCTaGAGTCTTCTCCTTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KRKHFKWGKGLETQAVFNLWSCS*SLLLFL Trigger: GAGAAAAAGGAGAAGACTCCAGCTACAACTCCAGAG...ATTAAATACTGCCTGGGTTTCAAGTCCCTTCCCCCATTTGAAATGCTTCCTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CCA 90 bp | GTAACTGAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAGACTGTCCTTTACTGTaGAGGAATGTGATGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VTENGPASFTILRNLLRKDCPLL*RNVMEK Trigger: CTTCTCCATCACATTCCTCCACAGTAAAGGACAGTC...TTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTCAGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | CCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATCAAAACTCCTTCATAAATaGCTTGCCTATGCGCACGAC | + |
|
Preference number: 4 (lower is better) Translates to: PNVFTLTEFTHKGNLSTSKLLHK*LAYAHD Trigger: GTCGTGCGCATAGGCAAGTCATTTATGAAGGAGTTT...TGATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | AAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATAAACTAGCCAGACTCTaGAGCCAGCTTGAGATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KMGPLHSQFSEIYSGKYNKLARL*SQLEMV Trigger: AACCATCTCAAGCTGGCTTCAGAGTCTGGCTAGTTT...ATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | ACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATTGTGATGGAGAAGGATaGCTATCAATTTTGCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: TPMFSHLQNSHTKATYLHCDGEG*LSILRR Trigger: ACGCCGCAAAATTGATAGTCATCCTTCTCCATCACA...ATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000151430.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATTACTGTGGAGGAATGTaGTGGAGAAGGATGACTATC | + |
|
Preference number: 4 (lower is better) Translates to: TPMFSHLQNSHTKATYLHYCGGM*WRRMTI Trigger: GATAGTCATCCTTCTCCATCACATTCCTCCACAGTA...ATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000151430.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAGCTCTTAAATATGGGAGATGTCATTCTGAGAGTGACTCATGGAGCTTTGCTTTTTGCCACCAGATaGGATTTTATCCATCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QKLLNMGDVILRVTHGALLFATR*DFIHLL Trigger: GAGAAGATGGATAAAATCTCATCTGGTGGCAAAAAG...CAAAGCTCCATGAGTCACTCTCAGAATGACATCTCCCATATTTAAGAGCTTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000145586.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAGACCTGGAGGATGTTCCCAGAAAATGAGGAAATATTTCTGTGTCTCTGTCTCTTCCTTTCCTCCTaGACTATCCCGTTTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TKTWRMFPENEEIFLCLCLFLSS*TIPFFF Trigger: AAAGAAAAACGGGATAGTTCAGGAGGAAAGGAAGAG...ACAGAGACACAGAAATATTTCCTCATTTTCTGGGAACATCCTCCAGGTCTTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS-3UTR GCA 90 bp | CTGCAACTCTGTATAAAGACGATGGCGTCTCACCACTTGGTTCCTGGTAAAACTTTTCAATATCTAATATaGAGAACACGTCAGCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQLCIKTMASHHLVPGKTFQYLI*RTRQQG Trigger: TCCTTGCTGACGTGTTCTGCATATTAGATATTGAAA...AGTTTTACCAGGAACCAAGTGGTGAGACGCCATCGTCTTTATACAGAGTTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129915.8 |
||
| CDS-3UTR GCA 90 bp | GGAATGTCTTGTCAAAAGGATGGTGGTATGTATGCATCTTCTGACTTAAAGCAGTCAAAGCTCTCTACTTaGTTCGGTGCTCTCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GMSCQKDGGMYASSDLKQSKLST*FGALLF Trigger: AAACAAGAGAGCACCGAAGCAAGTAGAGAGCTTTGA...CTGCTTTAAGTCAGAAGATGCATACATACCACCATCCTTTTGACAAGACATTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR GCA 90 bp | GGAATGTCTTGTCAAAAGGATGGTGGTATGTATGCATCTTCTGACTTAAAGCAGACAAAATTGTTGGATTaGTGTGGCTCAGCTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GMSCQKDGGMYASSDLKQTKLLD*CGSACQ Trigger: TTGGCAAGCTGAGCCACAGCAATCCAACAATTTTGT...CTGCTTTAAGTCAGAAGATGCATACATACCACCATCCTTTTGACAAGACATTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR GCA 90 bp | ATAATCACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATGTCATGGCTTCTAACTaGTCCATCGTCATCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IITPMFSHLQNSHTKATYVMASN*SIVISS Trigger: AGAGGAGATGACGATGGAGCAGTTAGAAGCCATGAC...ATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGTGATTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CCA 90 bp | CTGCAACTCTGTATAAAGACGATGGCGTCTCACCACTTGGTTCCTGGTAAAACTTTCCCTTTAATGACATaGTATGACAACTCATACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQLCIKTMASHHLVPGKTFPLMT*YDNSYR Trigger: TCTGTATGAGTTGTCATACCATGTCATTAAAGGGAA...AGTTTTACCAGGAACCAAGTGGTGAGACGCCATCGTCTTTATACAGAGTTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129915.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAGACCTGGAGGATGTTCCCAGAAAATGAGGAAATATTTCTGTGTCTCTGTATTGTTGGATTGCTGTaGCTCAGCTTGCCAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TKTWRMFPENEEIFLCLCIVGLL*LSLPIC Trigger: ACAAATTGGCAAGCTGAGCCACAGCAATCCAACAAT...ACAGAGACACAGAAATATTTCCTCATTTTCTGGGAACATCCTCCAGGTCTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CCA 90 bp | CAGAAGCTCTTAAATATGGGAGATGTCATTCTGAGAGTGACTCATGGAGCTTTGTTCATAGCTGGTATGTaGAACTGCAAGGTCATACAT | + |
|
Preference number: 4 (lower is better) Translates to: QKLLNMGDVILRVTHGALFIAGM*NCKVIH Trigger: ATGTATGACCTTGCAGTTCCACATACCAGCTATGAA...CAAAGCTCCATGAGTCACTCTCAGAATGACATCTCCCATATTTAAGAGCTTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAATGGATTATTGACACATGCTATACCATGGATGACTCTTGATAACAAGGCCCATTTTGTACACTaGCAACAGCATTCCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RRNGLLTHAIPWMTLDNKAHFVH*QQHSLE Trigger: CTCCAAGGAATGCTGTTGCCAGTGTACAAAATGGGC...CTTGTTATCAAGAGTCATCCATGGTATAGCATGTGTCAATAATCCATTCCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CCA 90 bp | CCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATCACTCTGGAGTTGTAGCTaGAGTCTTCTCCTTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PNVFTLTEFTHKGNLSTSLWSCS*SLLLFL Trigger: GAGAAAAAGGAGAAGACTCCAGCTACAACTCCAGAG...TGATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000151430.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGGAAGCATTTCAAATGGGGGAAGGGACTTGAAACCCAGGCAGTATTTAATCTACATCTCTTTCTCTaGATGGCTCCTTCTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KRKHFKWGKGLETQAVFNLHLFL*MAPSLF Trigger: AAAGAGAGAAGGAGCCATCCAGAGAAAGAGATGTAG...ATTAAATACTGCCTGGGTTTCAAGTCCCTTCCCCCATTTGAAATGCTTCCTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CCA 90 bp | GGAATGTCTTGTCAAAAGGATGGTGGTATGTATGCATCTTCTGACTTAAAGCAGACTCTTGGACAGTGGTaGAGGGTTATGGTTAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: GMSCQKDGGMYASSDLKQTLGQW*RVMVNV Trigger: TACATTAACCATAACCCTCCACCACTGTCCAAGAGT...CTGCTTTAAGTCAGAAGATGCATACATACCACCATCCTTTTGACAAGACATTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAATGGATTATTGACACATGCTATACCATGGATGACTCTTGATAACAAGCTCTCTCCTTACTCTTaGACAGTGGTGGAGGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RRNGLLTHAIPWMTLDNKLSPYS*TVVEGY Trigger: ATAACCCTCCACCACTGTCCAAGAGTAAGGAGAGAG...CTTGTTATCAAGAGTCATCCATGGTATAGCATGTGTCAATAATCCATTCCTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAGCTCTTAAATATGGGAGATGTCATTCTGAGAGTGACTCATGGAGCTTTGTTTCTTTATCATGCCTaGATTCCTTTTTGCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: QKLLNMGDVILRVTHGALFLYHA*IPFCHQ Trigger: CTGGTGGCAAAAAGGAATCCAGGCATGATAAAGAAA...CAAAGCTCCATGAGTCACTCTCAGAATGACATCTCCCATATTTAAGAGCTTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000145586.8 |
||
| CDS-3UTR TCA 90 bp | CCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATCAAAATTCGCCTCTCCCTaGTTTCTCCCAGTTCTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PNVFTLTEFTHKGNLSTSKFASP*FLPVLY Trigger: ATAAAGAACTGGGAGAAATCAGGGAGAGGCGAATTT...TGATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | ACAAAGACCTGGAGGATGTTCCCAGAAAATGAGGAAATATTTCTGTGTCTCTGTTTGAATCCAAGAATATaGCACAGTGTTTGTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TKTWRMFPENEEIFLCLCLNPRI*HSVCGS Trigger: TGAGCCACAAACACTGTGTCATATTCTTGGATTCAA...ACAGAGACACAGAAATATTTCCTCATTTTCTGGGAACATCCTCCAGGTCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | TCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGGGCTCAACGGTTATGTaGATGAGCTTGCAAATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFTILRNLLRKIQFRSQLGSTVM*MSLQIA Trigger: TGCTATTTGCAAGCTCATTCACATAACCGTTGAGCC...CAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | ACAAAGACCTGGAGGATGTTCCCAGAAAATGAGGAAATATTTCTGTGTCTCTGTTTGCTTCCATCAGACTaGAACTCCTTCATAAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: TKTWRMFPENEEIFLCLCLLPSD*NSFIND Trigger: GTCATTTATGAAGGAGTTTCAGTCTGATGGAAGCAA...ACAGAGACACAGAAATATTTCCTCATTTTCTGGGAACATCCTCCAGGTCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | ACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATGCCAATTTGTCTTCCTaGAGGCTTCACATTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPMFSHLQNSHTKATYLHANLSS*RLHIFL Trigger: AAGGAAAATGTGAAGCCTTCAGGAAGACAAATTGGC...ATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | ACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGTATGATACTCTGAAGCCAGCTTaGGATGGTTGTGTCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: TILRNLLRKIQFRSQLYDTLKPA*DGCVIM Trigger: CATGATGACACAACCATCTCAAGCTGGCTTCAGAGT...ATCATACAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | TCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGTTCTCTCCACCCTCCTaGAAAATTACCCCATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SFTILRNLLRKIQFRSQLFSPPS*KITPFL Trigger: GAGAAATGGGGTAATTTTTCAGGAGGGTGGAGAGAA...CAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | AAAAGGAAGCATTTCAAATGGGGGAAGGGACTTGAAACCCAGGCAGTATTTAATAATATATTCCTGATGTaGGTATATTCGCCCGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KRKHFKWGKGLETQAVFNNIFLM*VYSPVS Trigger: TGAGACGGGCGAATATACTCACATCAGGAATATATT...ATTAAATACTGCCTGGGTTTCAAGTCCCTTCCCCCATTTGAAATGCTTCCTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | ACAAAGACCTGGAGGATGTTCCCAGAAAATGAGGAAATATTTCTGTGTCTCTGTCAATCAATATATTCCTaGTGTGAGTATATTCGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TKTWRMFPENEEIFLCLCQSIYS*CEYIRP Trigger: CGGGCGAATATACTCACATCAGGAATATATTGATTG...ACAGAGACACAGAAATATTTCCTCATTTTCTGGGAACATCCTCCAGGTCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | ACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGTATGATCTGAGATCTCTCCCTTaGTTTATCAGTCTCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TILRNLLRKIQFRSQLYDLRSLP*FISLLS Trigger: GCTGAGGAGACTGATAAATCAAGGGAGAGATCTCAG...ATCATACAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | GTAACTGAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAATCTCTTTCCCTTTCTTaGGTCGATTTTGATTCTACG | + |
|
Preference number: 4 (lower is better) Translates to: VTENGPASFTILRNLLRKSLSLS*VDFDST Trigger: CGTAGAATCAAAATCGACTCAAGAAAGGGAAAGAGA...TTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTCAGTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | AGAAGGAATGGATTATTGACACATGCTATACCATGGATGACTCTTGATAACAAGTACTGTGGAGGAATGTaGTGGAGAAGGATGACTATC | + |
|
Preference number: 4 (lower is better) Translates to: RRNGLLTHAIPWMTLDNKYCGGM*WRRMTI Trigger: GATAGTCATCCTTCTCCATCACATTCCTCCACAGTA...CTTGTTATCAAGAGTCATCCATGGTATAGCATGTGTCAATAATCCATTCCTTCT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS-3UTR TCA 90 bp | AAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATTTCGCGGTCATTGTTTaGATGATCCCTTTTCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KMGPLHSQFSEIYSGKYNFAVIV*MIPFPF Trigger: GAACGGAAAAGGGATCATTCAAACAATGACCGCGAA...ATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS-3UTR TCA 90 bp | GGAATGTCTTGTCAAAAGGATGGTGGTATGTATGCATCTTCTGACTTAAAGCAGCTTTTTGCCACCAGATaGGATTTTATCCATCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GMSCQKDGGMYASSDLKQLFATR*DFIHLL Trigger: GAGAAGATGGATAAAATCTCATCTGGTGGCAAAAAG...CTGCTTTAAGTCAGAAGATGCATACATACCACCATCCTTTTGACAAGACATTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000145586.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATCTCTTCCTTTCCTCCTaGACTATCCCGTTTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TPMFSHLQNSHTKATYLHLFLSS*TIPFFF Trigger: AAAGAAAAACGGGATAGTTCAGGAGGAAAGGAAGAG...ATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAGACCTGGAGGATGTTCCCAGAAAATGAGGAAATATTTCTGTGTCTCTGTATGTTCTGTGCATGCTaGCAATCACCAACTTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: TKTWRMFPENEEIFLCLCMFCAC*QSPTFN Trigger: GTTAAAAGTTGGTGATTGGCAGCATGCACAGAACAT...ACAGAGACACAGAAATATTTCCTCATTTTCTGGGAACATCCTCCAGGTCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR GCA 90 bp | ACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGTATGATACAGCTCCTCAGACATaGAAGCATTGCAGTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TILRNLLRKIQFRSQLYDTAPQT*KHCSPS Trigger: TGATGGACTGCAATGCTTGCATGTCTGAGGAGCTGT...ATCATACAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR GCA 90 bp | CAGAAGCTCTTAAATATGGGAGATGTCATTCTGAGAGTGACTCATGGAGCTTTGGTAGGTCAAAACTTTTaGCTGCCTTTAATTGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: QKLLNMGDVILRVTHGALVGQNF*LPLIDW Trigger: CCAATCAATTAAAGGCAGGCAAAAGTTTTGACCTAC...CAAAGCTCCATGAGTCACTCTCAGAATGACATCTCCCATATTTAAGAGCTTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR GCA 90 bp | GTAACTGAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAGATGACTATCAATTTTaGGGCGTTTTTGTTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VTENGPASFTILRNLLRKDDYQF*GVFVPC Trigger: ACAGGGAACAAAAACGCCGCAAAATTGATAGTCATC...TTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTCAGTTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS-3UTR GCA 90 bp | GGAATGTCTTGTCAAAAGGATGGTGGTATGTATGCATCTTCTGACTTAAAGCAGGATGACTATCAATTTTaGGGCGTTTTTGTTCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GMSCQKDGGMYASSDLKQDDYQF*GVFVPC Trigger: ACAGGGAACAAAAACGCCGCAAAATTGATAGTCATC...CTGCTTTAAGTCAGAAGATGCATACATACCACCATCCTTTTGACAAGACATTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000151430.8 |
||
| CDS-3UTR CCA 90 bp | ATAATCACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATTGGCGTCTCACCACTTaGTTCCTGGTAAAACTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IITPMFSHLQNSHTKATYWRLTT*FLVKLE Trigger: TTCAAGTTTTACCAGGAACCAAGTGGTGAGACGCCA...ATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGTGATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CCA 90 bp | GAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATGTCATCCCAGACTTTaGAAACATGTAAGGAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: ENGPASFTILRNLLRKIQCHPRL*KHVRRP Trigger: TGGTCTCCTTACATGTTTCCAAAGTCTGGGATGACA...TTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CCA 90 bp | ATAATCACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATTATCACTATGCCACCTaGTCACCGTCTCTAACATAC | + |
|
Preference number: 4 (lower is better) Translates to: IITPMFSHLQNSHTKATYYHYAT*SPSLTY Trigger: GTATGTTAGAGACGGTGACCAGGTGGCATAGTGATA...ATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGTGATTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CCA 90 bp | ACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATCTACATCTCTTTCTCTaGATGGCTCCTTCTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TPMFSHLQNSHTKATYLHLHLFL*MAPSLF Trigger: AAAGAGAGAAGGAGCCATCCAGAGAAAGAGATGTAG...ATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000151430.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGGAAGCATTTCAAATGGGGGAAGGGACTTGAAACCCAGGCAGTATTTAATGGCTTTTATTTTCACTaGGAATCCGGCATAAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: KRKHFKWGKGLETQAVFNGFYFH*ESGINV Trigger: TACATTTATGCCGGATTCTCAGTGAAAATAAAAGCC...ATTAAATACTGCCTGGGTTTCAAGTCCCTTCCCCCATTTGAAATGCTTCCTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | GGAATGTCTTGTCAAAAGGATGGTGGTATGTATGCATCTTCTGACTTAAAGCAGACAGCACAACCATTGTaGGTTTTCTTACAATTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GMSCQKDGGMYASSDLKQTAQPL*VFLQFA Trigger: AGCAAATTGTAAGAAAACTCACAATGGTTGTGCTGT...CTGCTTTAAGTCAGAAGATGCATACATACCACCATCCTTTTGACAAGACATTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | ACAAAGACCTGGAGGATGTTCCCAGAAAATGAGGAAATATTTCTGTGTCTCTGTCATCACCATCTCACATaGTGTAATGTATTTATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TKTWRMFPENEEIFLCLCHHHLT*CNVFMD Trigger: GTCCATAAATACATTACATCATGTGAGATGGTGATG...ACAGAGACACAGAAATATTTCCTCATTTTCTGGGAACATCCTCCAGGTCTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | TCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGTTTGGAGGCATTTCCTaGTTGTCATCAATCGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFTILRNLLRKIQFRSQLFGGIS*LSSIAF Trigger: GAAAGCGATTGATGACAATCAGGAAATGCCTCCAAA...CAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | AGAAGGAATGGATTATTGACACATGCTATACCATGGATGACTCTTGATAACAAGACTATTTCCATTGCTTaGATTCCCCTTTGGTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RRNGLLTHAIPWMTLDNKTISIA*IPLWCG Trigger: ACCACACCAAAGGGGAATTCAAGCAATGGAAATAGT...CTTGTTATCAAGAGTCATCCATGGTATAGCATGTGTCAATAATCCATTCCTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | ACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGTATGATTACTGTGGAGGAATGTaGTGGAGAAGGATGACTATC | + |
|
Preference number: 4 (lower is better) Translates to: TILRNLLRKIQFRSQLYDYCGGM*WRRMTI Trigger: GATAGTCATCCTTCTCCATCACATTCCTCCACAGTA...ATCATACAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS-3UTR TCA 90 bp | GAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATCTGGATCTTTCCCTTaGCTTGTCCAAATCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ENGPASFTILRNLLRKIQSGSFP*LVQIFL Trigger: AAGAAAGATTTGGACAAGTCAAGGGAAAGATCCAGA...TTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS-3UTR TCA 90 bp | AAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATCGGTCATTGTTTGAATaGTCCCTTTTCCGTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KMGPLHSQFSEIYSGKYNRSLFE*SLFRSF Trigger: GAAAGAACGGAAAAGGGATCATTCAAACAATGACCG...ATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATCTTTTTGCCACCAGATaGGATTTTATCCATCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPMFSHLQNSHTKATYLHLFATR*DFIHLL Trigger: GAGAAGATGGATAAAATCTCATCTGGTGGCAAAAAG...ATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS-3UTR TCA 90 bp | GGAATGTCTTGTCAAAAGGATGGTGGTATGTATGCATCTTCTGACTTAAAGCAGTTGTCAGAGGACTTATaGTGTTTCTTCTCTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GMSCQKDGGMYASSDLKQLSEDL*CFFSSF Trigger: AAAGGAAGAGAAGAAACATCATAAGTCCTCTGACAA...CTGCTTTAAGTCAGAAGATGCATACATACCACCATCCTTTTGACAAGACATTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS-3UTR GCA 90 bp | GTAACTGAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAACTAGATGCCTGTTCGTaGTTTAAATTCCCTTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: VTENGPASFTILRNLLRKLDACS*FKFPLM Trigger: CATTAAAGGGAATTTAAAGCACGAACAGGCATCTAG...TTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTCAGTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR GCA 90 bp | ACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGTATGATATCCATGATGTTCTGTaGATGCTGCCAATCACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: TILRNLLRKIQFRSQLYDIHDVL*MLPITN Trigger: GTTGGTGATTGGCAGCATGCACAGAACATCATGGAT...ATCATACAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR GCA 90 bp | ATAATCACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCAGACATGCAAGCATTaGAGTCCATCAAAGAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IITPMFSHLQNSHTKATYQTCKH*SPSKKE Trigger: CTCTTTCTTTGATGGACTGCAATGCTTGCATGTCTG...ATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGTGATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR GCA 90 bp | ATAATCACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATGCTGGTATGTGGAACTaGAAGGTCATACATTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: IITPMFSHLQNSHTKATYAGMWN*KVIHCQ Trigger: TTGACAATGTATGACCTTGCAGTTCCACATACCAGC...ATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGTGATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR GCA 90 bp | GGAATGTCTTGTCAAAAGGATGGTGGTATGTATGCATCTTCTGACTTAAAGCAGATTTTCAGTGCAGCTTaGAACCGTGTAAATTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: GMSCQKDGGMYASSDLKQIFSAA*NRVNYV Trigger: GACATAATTTACACGGTTGCAAGCTGCACTGAAAAT...CTGCTTTAAGTCAGAAGATGCATACATACCACCATCCTTTTGACAAGACATTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR GCA 90 bp | CAGAAGCTCTTAAATATGGGAGATGTCATTCTGAGAGTGACTCATGGAGCTTTGATCTTTTCTTTATCATaGCTGGATTCCTTTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QKLLNMGDVILRVTHGALIFSLS*LDSFLP Trigger: TGGCAAAAAGGAATCCAGGCATGATAAAGAAAAGAT...CAAAGCTCCATGAGTCACTCTCAGAATGACATCTCCCATATTTAAGAGCTTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000145586.8 |
||
| CDS-3UTR CCA 90 bp | ATAATCACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATGAAGTCATCATGTTCTaGCCTGCATTCAAACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: IITPMFSHLQNSHTKATYEVIMF*PAFKHF Trigger: GAAGTGTTTGAATGCAGGCCAGAACATGATGACTTC...ATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGTGATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CCA 90 bp | GGAATGTCTTGTCAAAAGGATGGTGGTATGTATGCATCTTCTGACTTAAAGCAGAAATGCTGCATCGTGTaGTGTATGAAACTCATTACA | + |
|
Preference number: 4 (lower is better) Translates to: GMSCQKDGGMYASSDLKQKCCIV*CMKLIT Trigger: TGTAATGAGTTTCATACACCACACGATGCAGCATTT...CTGCTTTAAGTCAGAAGATGCATACATACCACCATCCTTTTGACAAGACATTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAATGGATTATTGACACATGCTATACCATGGATGACTCTTGATAACAAGCTTCTCTTTCATAGCTaGTATGTGGAACTGCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RRNGLLTHAIPWMTLDNKLLFHS*YVELQG Trigger: ACCTTGCAGTTCCACATACCAGCTATGAAAGAGAAG...CTTGTTATCAAGAGTCATCCATGGTATAGCATGTGTCAATAATCCATTCCTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CCA 90 bp | AAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATACTCTTGGACAGTGGTaGAGGGTTATGGTTAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: KMGPLHSQFSEIYSGKYNTLGQW*RVMVNV Trigger: TACATTAACCATAACCCTCCACCACTGTCCAAGAGT...ATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS-3UTR CCA 90 bp | ATAATCACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTTACTCTTGGACAGTaGTGGAGGGTTATGGTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: IITPMFSHLQNSHTKATYLTLGQ*WRVMVN Trigger: ATTAACCATAACCCTCCACCACTGTCCAAGAGTAAG...ATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGTGATTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS-3UTR CCA 90 bp | TCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGCTTACTCTTGGACAGTaGTGGAGGGTTATGGTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SFTILRNLLRKIQFRSQLLTLGQ*WRVMVN Trigger: ATTAACCATAACCCTCCACCACTGTCCAAGAGTAAG...CAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS-3UTR CCA 90 bp | GAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATTTCTTTATCATGCCTaGATTCCTTTTTGCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: ENGPASFTILRNLLRKIQFLYHA*IPFCHQ Trigger: CTGGTGGCAAAAAGGAATCCAGGCATGATAAAGAAA...TTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS-3UTR TCA 90 bp | ACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATAACAGCATCAATTGCTaGAAAAATGCATCGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TPMFSHLQNSHTKATYLHNSINC*KNASRK Trigger: TTTCCTCGATGCATTTTTTCAGCAATTGATGCTGTT...ATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | ACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGTATGATCGGTCATTGTTTGAATaGTCCCTTTTCCGTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TILRNLLRKIQFRSQLYDRSLFE*SLFRSF Trigger: GAAAGAACGGAAAAGGGATCATTCAAACAATGACCG...ATCATACAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGGAATGGATTATTGACACATGCTATACCATGGATGACTCTTGATAACAAGGACTTTTGGTTGAACTaGTGTGACTGTTTGATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRNGLLTHAIPWMTLDNKDFWLN*CDCLIS Trigger: GCTTATCAAACAGTCACAGCAGTTCAACCAAAAGTC...CTTGTTATCAAGAGTCATCCATGGTATAGCATGTGTCAATAATCCATTCCTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR GCA 90 bp | ACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGTATGATGTATTTACGGAATACTaGACCACAGAAACTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TILRNLLRKIQFRSQLYDVFTEY*TTETSQ Trigger: CTGGCTAGTTTCTGTGGTGCAGTATTCCGTAAATAC...ATCATACAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR GCA 90 bp | GGAATGTCTTGTCAAAAGGATGGTGGTATGTATGCATCTTCTGACTTAAAGCAGATCTTTTCTTTATCATaGCTGGATTCCTTTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GMSCQKDGGMYASSDLKQIFSLS*LDSFLP Trigger: TGGCAAAAAGGAATCCAGGCATGATAAAGAAAAGAT...CTGCTTTAAGTCAGAAGATGCATACATACCACCATCCTTTTGACAAGACATTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000145586.8 |
||
| CDS-3UTR CCA 90 bp | ACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATATCAAACAAAATTGTTaGATTGCTGTGGCTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPMFSHLQNSHTKATYLHIKQNC*IAVAQL Trigger: AAGCTGAGCCACAGCAATCCAACAATTTTGTTTGAT...ATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CCA 90 bp | ACAAAGACCTGGAGGATGTTCCCAGAAAATGAGGAAATATTTCTGTGTCTCTGTTATTTTGACGAAATATaGTGTGCATACATTGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: TKTWRMFPENEEIFLCLCYFDEI*CAYIGL Trigger: TAGGCCAATGTATGCACACCATATTTCGTCAAAATA...ACAGAGACACAGAAATATTTCCTCATTTTCTGGGAACATCCTCCAGGTCTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CCA 90 bp | TCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGATTCCTTTTCATATGTaGCTCTATCACTATGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SFTILRNLLRKIQFRSQLIPFHM*LYHYAT Trigger: GGTGGCATAGTGATAGAGCCACATATGAAAAGGAAT...CAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CCA 90 bp | CCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATCATATGGTAAGGAATCCTaGATAGTTTCCACATTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PNVFTLTEFTHKGNLSTSYGKES*IVSTFL Trigger: AAGGAATGTGGAAACTATCCAGGATTCCTTACCATA...TGATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CCA 90 bp | AAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATTTTGTCTTCTTTATTTaGCCGCTCTTCCTTCGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KMGPLHSQFSEIYSGKYNFVFFI*PLFLRF Trigger: AAACCGAAGGAAGAGCGGCCAAATAAAGAAGACAAA...ATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CCA 90 bp | GGAATGTCTTGTCAAAAGGATGGTGGTATGTATGCATCTTCTGACTTAAAGCAGTTTGTCTTTCTCATTTaGATATTGAGACTCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: GMSCQKDGGMYASSDLKQFVFLI*ILRLTW Trigger: CCATGTGAGTCTCAATATCCAAATGAGAAAGACAAA...CTGCTTTAAGTCAGAAGATGCATACATACCACCATCCTTTTGACAAGACATTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000145586.8 |
||
| CDS-3UTR CCA 90 bp | ATAATCACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATTTTCTTTATCATGCCTaGATTCCTTTTTGCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: IITPMFSHLQNSHTKATYFLYHA*IPFCHQ Trigger: CTGGTGGCAAAAAGGAATCCAGGCATGATAAAGAAA...ATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGTGATTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| 3UTR CAA 72 bp | ATGCTCATCAAGAAGCTTGATAAATTCAGAGGTATCTaGTTTATCCTGTATCATTCAGGAAGTCTTCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: MLIKKLDKFRGI*FILYHSGSLQC Trigger: GCACTGAAGACTTCCTGAATGATACAGGATAAACAAGATACCTCTGAATTTATCAAGCTTCTTGATGAGCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
||
| CDS-3UTR TCA 90 bp | ACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGTATGATTCTGGATCTTTCCCTTaGCTTGTCCAAATCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TILRNLLRKIQFRSQLYDSGSFP*LVQIFL Trigger: AAGAAAGATTTGGACAAGTCAAGGGAAAGATCCAGA...ATCATACAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGGAATGGATTATTGACACATGCTATACCATGGATGACTCTTGATAACAAGTTGTCAGAGGACTTATaGTGTTTCTTCTCTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RRNGLLTHAIPWMTLDNKLSEDL*CFFSSF Trigger: AAAGGAAGAGAAGAAACATCATAAGTCCTCTGACAA...CTTGTTATCAAGAGTCATCCATGGTATAGCATGTGTCAATAATCCATTCCTTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| CDS-3UTR GCA 90 bp | TTTGTTTCAATATCTAATATGCAGAACACGTCAGCAAGGATAGAAGGCATATCCCTAGATGCCTGTTCGTaGTTTAAATTCCCTTTAATG | + |
|
Preference number: 4 (lower is better) Translates to: FVSISNMQNTSARIEGISLDACS*FKFPLM Trigger: CATTAAAGGGAATTTAAAGCACGAACAGGCATCTAG...GGATATGCCTTCTATCCTTGCTGACGTGTTCTGCATATTAGATATTGAAACAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131259.2 |
||
| CDS-3UTR GCA 90 bp | CCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATCATTTCAATATCTAATATaGAGAACACGTCAGCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PNVFTLTEFTHKGNLSTSFQYLI*RTRQQG Trigger: TCCTTGCTGACGTGTTCTGCATATTAGATATTGAAA...TGATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR GCA 90 bp | ATAATCACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCATCATGTTCTGGCCTaGATTCAAACACTTCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IITPMFSHLQNSHTKATYHHVLA*IQTLLK Trigger: TTTTAGAAGTGTTTGAATGCAGGCCAGAACATGATG...ATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGTGATTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS-3UTR GCA 90 bp | ACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGTATGATTCAATGAGATTAAATTaGAGGAGGACTGCTGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: TILRNLLRKIQFRSQLYDSMRLN*RRTAAT Trigger: AGTTGCAGCAGTCCTCCTGCAATTTAATCTCATTGA...ATCATACAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR GCA 90 bp | CCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATCAATCTTTTCTTTATCATaGCTGGATTCCTTTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PNVFTLTEFTHKGNLSTSIFSLS*LDSFLP Trigger: TGGCAAAAAGGAATCCAGGCATGATAAAGAAAAGAT...TGATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| CDS-3UTR CCA 90 bp | CCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATCATTCCCTTTAATGACATaGTATGACAACTCATACAGA | + |
|
Preference number: 4 (lower is better) Translates to: PNVFTLTEFTHKGNLSTSFPLMT*YDNSYR Trigger: TCTGTATGAGTTGTCATACCATGTCATTAAAGGGAA...TGATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CCA 90 bp | ACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATTTTGTCTTTCTCATTTaGATATTGAGACTCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: TPMFSHLQNSHTKATYLHFVFLI*ILRLTW Trigger: CCATGTGAGTCTCAATATCCAAATGAGAAAGACAAA...ATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| CDS-3UTR TCA 90 bp | ACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGTATGATGGTAACAGAACATATTaGATACATCCCTCCTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TILRNLLRKIQFRSQLYDGNRTY*IHPSSN Trigger: ATTTGAGGAGGGATGTATTCAATATGTTCTGTTACC...ATCATACAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | ACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGTATGATGTTTCATTCTTCCACTaGCCATATAGTCGATATCTA | + |
|
Preference number: 4 (lower is better) Translates to: TILRNLLRKIQFRSQLYDVSFFH*PYSRYL Trigger: TAGATATCGACTATATGGTCAGTGGAAGAATGAAAC...ATCATACAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR TCA 90 bp | ACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGTATGATTTCAGGTATCATGTGTaGCTTTCTACTTTTCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: TILRNLLRKIQFRSQLYDFRYHV*LSTFQL Trigger: CAGTTGAAAAGTAGAAAGTCACACATGATACCTGAA...ATCATACAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CCA 90 bp | TTTGTTTCAATATCTAATATGCAGAACACGTCAGCAAGGATAGAAGGCATATCCTTCCCTTTAATGACATaGTATGACAACTCATACAGA | + |
|
Preference number: 4 (lower is better) Translates to: FVSISNMQNTSARIEGISFPLMT*YDNSYR Trigger: TCTGTATGAGTTGTCATACCATGTCATTAAAGGGAA...GGATATGCCTTCTATCCTTGCTGACGTGTTCTGCATATTAGATATTGAAACAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131259.2 |
||
| CDS-3UTR CCA 90 bp | AAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATATTTTAACTGACTTTTaGTTGAACTGCTGTGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KMGPLHSQFSEIYSGKYNILTDF*LNCCDC Trigger: ACAGTCACAGCAGTTCAACCAAAAGTCAGTTAAAAT...ATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CCA 90 bp | ACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGTATGATGATGGAAGTAATACCTaGTCAGTAATGCTAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TILRNLLRKIQFRSQLYDDGSNT*SVMLSK Trigger: TTTGCTTAGCATTACTGACCAGGTATTACTTCCATC...ATCATACAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAATGGATTATTGACACATGCTATACCATGGATGACTCTTGATAACAAGTTTGTCTTTCTCATTTaGATATTGAGACTCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: RRNGLLTHAIPWMTLDNKFVFLI*ILRLTW Trigger: CCATGTGAGTCTCAATATCCAAATGAGAAAGACAAA...CTTGTTATCAAGAGTCATCCATGGTATAGCATGTGTCAATAATCCATTCCTTCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS-3UTR CCA 90 bp | ACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGTATGATAATGTACTGATGCCTTaGTTAGTTTGTAATGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: TILRNLLRKIQFRSQLYDNVLMP*LVCNAI Trigger: AATGGCATTACAAACTAACCAAGGCATCAGTACATT...ATCATACAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS TCA 90 bp | CTCTACTTGCTTCGGTGCTCTCTTGTTTTGCAAAGCGCTAACCGGTaGGCCCTTAGCACCTTTAGGAACACCAACTCTTCGGTAGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LYLLRCSLVLQSANR*ALSTFRNTNSSVER Trigger: CCTCTCTACCGAAGAGTTGGTGTTCCTAAAGGTGCTAAGGGCTCACCGGTTAGCGCTTTGCAAAACAAGAGAGCACCGAAGCAAGTAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS TCA 90 bp | TCGATGAGACTGTCCTTTACTGTGGAGGAATGTGATGGAGAAGGATaGCTATCAATTTTGCGGCGTTTTTGTTCCCTGTCAGGCTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SMRLSFTVEECDGEG*LSILRRFCSLSGSE Trigger: CTCGGAGCCTGACAGGGAACAAAAACGCCGCAAAATTGATAGTCATCCTTCTCCATCACATTCCTCCACAGTAAAGGACAGTCTCATCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS GCA 90 bp | CTCAAATCTTCAAAGCTCTCTACTTGCTTCGGTGCTCTCTTGTTTTaGAAAGCGCTAACCGGTGAGCCCTTAGCACCTTTAGGAACACCA | + |
|
Preference number: 5 (lower is better) Translates to: LKSSKLSTCFGALLF*KALTGEPLAPLGTP Trigger: TGGTGTTCCTAAAGGTGCTAAGGGCTCACCGGTTAGCGCTTTGCAAAACAAGAGAGCACCGAAGCAAGTAGAGAGCTTTGAAGATTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS GCA 90 bp | CCTTTACTGTGGAGGAATGTGATGGAGAAGGATGACTATCAATTTTaGGGCGTTTTTGTTCCCTGTCAGGCTCCGAGATATCTGATCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PLLWRNVMEKDDYQF*GVFVPCQAPRYLIG Trigger: CCCGATCAGATATCTCGGAGCCTGACAGGGAACAAAAACGCCGCAAAATTGATAGTCATCCTTCTCCATCACATTCCTCCACAGTAAAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000151430.8 |
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| CDS TCA 90 bp | CAGGCTATACTAACCTTTACTGTGGAGGAATGTGATGGAGAAGGATaGCTATCAATTTTGCGGCGTTTTTGTTCCCTGTCAGGCTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: QAILTFTVEECDGEG*LSILRRFCSLSGSE Trigger: CTCGGAGCCTGACAGGGAACAAAAACGCCGCAAAATTGATAGTCATCCTTCTCCATCACATTCCTCCACAGTAAAGGTTAGTATAGCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
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| CDS GCA 90 bp | AACATATTGAATACATCCCTCCTCAAATCTTCAAAGCTCTCTACTTaGTTCGGTGCTCTCTTGTTTTGCAAAGCGCTAACCGGTGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: NILNTSLLKSSKLST*FGALLFCKALTGEP Trigger: GGGCTCACCGGTTAGCGCTTTGCAAAACAAGAGAGCACCGAAGCAAGTAGAGAGCTTTGAAGATTTGAGGAGGGATGTATTCAATATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS CCA 90 bp | AGTCCCACCACCAGGCCCATTTTGTACACTGGCAACAGCATTCCTTaGAGGAGGATCCTTATGATGAAATTCATTTTCAGGTATCATGTG | + |
|
Preference number: 5 (lower is better) Translates to: SPTTRPILYTGNSIP*RRILMMKFIFRYHV Trigger: CACATGATACCTGAAAATGAATTTCATCATAAGGATCCTCCTCCAAGGAATGCTGTTGCCAGTGTACAAAATGGGCCTGGTGGTGGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS-3UTR CAA 90 bp | CAGAAGCTCTTAAATATGGGAGATGTCATTCTGAGAGTGACTCATGGAGCTTTGAATTTTGCGGCGTTTTaGTTCCCTGTCAGGCTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: QKLLNMGDVILRVTHGALNFAAF*FPVRLR Trigger: TCGGAGCCTGACAGGGAACAAAAACGCCGCAAAATT...CAAAGCTCCATGAGTCACTCTCAGAATGACATCTCCCATATTTAAGAGCTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000151430.8 |
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| CDS-3UTR CAA 90 bp | AAAAGGAAGCATTTCAAATGGGGGAAGGGACTTGAAACCCAGGCAGTATTTAATCCTCTTTCCGCCTCTTaGTTATGTCCGGTGGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: KRKHFKWGKGLETQAVFNPLSAS*LCPVAL Trigger: AAGTGCCACCGGACATAACAAAGAGGCGGAAAGAGG...ATTAAATACTGCCTGGGTTTCAAGTCCCTTCCCCCATTTGAAATGCTTCCTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| CDS TCA 90 bp | AGTATATCTGTAACCTTTACTGTGGAGGAATGTGATGGAGAAGGATaGCTATCAATTTTGCGGCGTTTTTGTTCCCTGTCAGGCTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SISVTFTVEECDGEG*LSILRRFCSLSGSE Trigger: CTCGGAGCCTGACAGGGAACAAAAACGCCGCAAAATTGATAGTCATCCTTCTCCATCACATTCCTCCACAGTAAAGGTTACAGATATACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124458.8 |
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| CDS CCA 90 bp | AGTTTCCACATTCCTTTTCATATGTGGCTCTATCACTATGCCACCTaGTCACCGTCTCTAACATACAGCAAAGAAATCTCCCATACCGAC | + |
|
Preference number: 5 (lower is better) Translates to: SFHIPFHMWLYHYAT*SPSLTYSKEISHTD Trigger: GTCGGTATGGGAGATTTCTTTGCTGTATGTTAGAGACGGTGACCAGGTGGCATAGTGATAGAGCCACATATGAAAAGGAATGTGGAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS-3UTR CAA 90 bp | GTAACTGAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAATGCTTCGGTGCTCTCTaGTTTTGCAAAGCGCTAACC | + |
|
Preference number: 5 (lower is better) Translates to: VTENGPASFTILRNLLRKCFGAL*FCKALT Trigger: GGTTAGCGCTTTGCAAAACAAGAGAGCACCGAAGCA...TTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTCAGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS-3UTR CAA 90 bp | GTAACTGAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAACCACCAGGCCCATTTaGTACACTGGCAACAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: VTENGPASFTILRNLLRKTTRPI*YTGNSI Trigger: AATGCTGTTGCCAGTGTACAAAATGGGCCTGGTGGT...TTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTCAGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS-3UTR CAA 90 bp | AAAAGGAAGCATTTCAAATGGGGGAAGGGACTTGAAACCCAGGCAGTATTTAATAATTTTGCGGCGTTTTaGTTCCCTGTCAGGCTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: KRKHFKWGKGLETQAVFNNFAAF*FPVRLR Trigger: TCGGAGCCTGACAGGGAACAAAAACGCCGCAAAATT...ATTAAATACTGCCTGGGTTTCAAGTCCCTTCCCCCATTTGAAATGCTTCCTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| CDS TCA 90 bp | TTTGGTGTGGTACTAGAAGCCTTATTAACAGCTTTTGTACCACACTaGGATCTCTCCCTTGATTTATCAGTCTCCTCAGCACCGCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FGVVLEALLTAFVPH*DLSLDLSVSSAPLS Trigger: TGAAAGCGGTGCTGAGGAGACTGATAAATCAAGGGAGAGATCTCAGTGTGGTACAAAAGCTGTTAATAAGGCTTCTAGTACCACACCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS-3UTR CAA 90 bp | CTGCAACTCTGTATAAAGACGATGGCGTCTCACCACTTGGTTCCTGGTAAAACTCAACTCATACAGAGCTaGTTGAAAATCTCTGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LQLCIKTMASHHLVPGKTQLIQS*LKISVG Trigger: ACCTACAGAGATTTTCAACAAGCTCTGTATGAGTTG...AGTTTTACCAGGAACCAAGTGGTGAGACGCCATCGTCTTTATACAGAGTTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129915.8 |
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| CDS-3UTR CAA 90 bp | CAGAAGCTCTTAAATATGGGAGATGTCATTCTGAGAGTGACTCATGGAGCTTTGGCCAGCTTGAGATGGTaGTGTCATCATGTTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: QKLLNMGDVILRVTHGALASLRW*CHHVSF Trigger: GAATGAAACATGATGACACAACCATCTCAAGCTGGC...CAAAGCTCCATGAGTCACTCTCAGAATGACATCTCCCATATTTAAGAGCTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS-3UTR CAA 90 bp | GTAACTGAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAGACTCTGAAGCCAGCTaGAGATGGTTGTGTCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: VTENGPASFTILRNLLRKDSEAS*RWLCHH Trigger: ATGATGACACAACCATCTCAAGCTGGCTTCAGAGTC...TTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTCAGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS-3UTR CAA 90 bp | ACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATAATTTTGCGGCGTTTTaGTTCCCTGTCAGGCTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: TPMFSHLQNSHTKATYLHNFAAF*FPVRLR Trigger: TCGGAGCCTGACAGGGAACAAAAACGCCGCAAAATT...ATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000151430.8 |
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| CDS-3UTR CAA 90 bp | ACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATTCTCTCTCCTTACTCTaGGACAGTGGTGGAGGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: TPMFSHLQNSHTKATYLHSLSLL*DSGGGL Trigger: TAACCCTCCACCACTGTCCAAGAGTAAGGAGAGAGA...ATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| CDS-3UTR CAA 90 bp | AAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATCCTCTTTCCGCCTCTTaGTTATGTCCGGTGGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: KMGPLHSQFSEIYSGKYNPLSAS*LCPVAL Trigger: AAGTGCCACCGGACATAACAAAGAGGCGGAAAGAGG...ATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS TCA 90 bp | AAATGGGATCATGTGAGAGGTGAGGACCAAGGTAACAGAACATATTaGATACATCCCTCCTCAAATCTTCAAAGCTCTCTACTTGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: KWDHVRGEDQGNRTY*IHPSSNLQSSLLAS Trigger: CGAAGCAAGTAGAGAGCTTTGAAGATTTGAGGAGGGATGTATTCAATATGTTCTGTTACCTTGGTCCTCACCTCTCACATGATCCCATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS-3UTR CAA 90 bp | CAGAAGCTCTTAAATATGGGAGATGTCATTCTGAGAGTGACTCATGGAGCTTTGAACTGCTGTGACTGTTaGATAAGCCCTAATGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: QKLLNMGDVILRVTHGALNCCDC*ISPNDS Trigger: GGAATCATTAGGGCTTATCAAACAGTCACAGCAGTT...CAAAGCTCCATGAGTCACTCTCAGAATGACATCTCCCATATTTAAGAGCTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CAA 90 bp | CCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATCATTGCTGTGGCTCAGCTaGCCAATTTGTCTTCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PNVFTLTEFTHKGNLSTSLLWLS*PICLPE Trigger: TTCAGGAAGACAAATTGGCAAGCTGAGCCACAGCAA...TGATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CAA 90 bp | GTAACTGAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAATACCCCATTTCTCTGTaGTGCCATAAGCAAACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VTENGPASFTILRNLLRKYPISL*CHKQTE Trigger: CTCTGTTTGCTTATGGCACAACAGAGAAATGGGGTA...TTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTCAGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CAA 90 bp | ACAAAGACCTGGAGGATGTTCCCAGAAAATGAGGAAATATTTCTGTGTCTCTGTGAGCCACTATTTCCATaGCTTGAATTCCCCTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TKTWRMFPENEEIFLCLCEPLFP*LEFPFG Trigger: ACCAAAGGGGAATTCAAGCAATGGAAATAGTGGCTC...ACAGAGACACAGAAATATTTCCTCATTTTCTGGGAACATCCTCCAGGTCTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CAA 90 bp | TCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGTCTCTCTCCTTACTCTaGGACAGTGGTGGAGGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: SFTILRNLLRKIQFRSQLSLSLL*DSGGGL Trigger: TAACCCTCCACCACTGTCCAAGAGTAAGGAGAGAGA...CAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS-3UTR CAA 90 bp | ACAAAGACCTGGAGGATGTTCCCAGAAAATGAGGAAATATTTCTGTGTCTCTGTGTTTTGAAACCCCCATaGTTCCATTCTCCTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TKTWRMFPENEEIFLCLCVLKPP*FHSPLS Trigger: GGAAAGAGGAGAATGGAACAATGGGGGTTTCAAAAC...ACAGAGACACAGAAATATTTCCTCATTTTCTGGGAACATCCTCCAGGTCTTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS-3UTR CAA 90 bp | CAGAAGCTCTTAAATATGGGAGATGTCATTCTGAGAGTGACTCATGGAGCTTTGTGCCTGGATTCCTTTTaGCCACCAGATGAGATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: QKLLNMGDVILRVTHGALCLDSF*PPDEIL Trigger: TAAAATCTCATCTGGTGGCAAAAAGGAATCCAGGCA...CAAAGCTCCATGAGTCACTCTCAGAATGACATCTCCCATATTTAAGAGCTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000145586.8 |
||
| CDS-3UTR CAA 90 bp | GGAATGTCTTGTCAAAAGGATGGTGGTATGTATGCATCTTCTGACTTAAAGCAGTCCTTCATAAATGACTaGCCTATGCGCACGACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GMSCQKDGGMYASSDLKQSFIND*PMRTTF Trigger: AAAAGTCGTGCGCATAGGCAAGTCATTTATGAAGGA...CTGCTTTAAGTCAGAAGATGCATACATACCACCATCCTTTTGACAAGACATTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CAA 90 bp | CAGAAGCTCTTAAATATGGGAGATGTCATTCTGAGAGTGACTCATGGAGCTTTGTCTCTGAAGTACTCTTaGAACATGTTCCATCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QKLLNMGDVILRVTHGALSLKYS*NMFHLL Trigger: AAGCAGATGGAACATGTTCAAAGAGTACTTCAGAGA...CAAAGCTCCATGAGTCACTCTCAGAATGACATCTCCCATATTTAAGAGCTTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CAA 90 bp | GAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAACTTTGTCTTCTTTATTaGGCCGCTCTTCCTTCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ENGPASFTILRNLLRKIQLCLLY*AALPSV Trigger: AACCGAAGGAAGAGCGGCCAAATAAAGAAGACAAAG...TTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CAA 90 bp | AAGATTCATTTGCTTGTAGCTACCATTGCACTCCAAAAAGGACTGCTTAAAGCACTTTGTCTTCTTTATTaGGCCGCTCTTCCTTCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KIHLLVATIALQKGLLKALCLLY*AALPSV Trigger: AACCGAAGGAAGAGCGGCCAAATAAAGAAGACAAAG...TGCTTTAAGCAGTCCTTTTTGGAGTGCAATGGTAGCTACAAGCAAATGAATCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
||
| CDS-3UTR CAA 90 bp | ACAAAGACCTGGAGGATGTTCCCAGAAAATGAGGAAATATTTCTGTGTCTCTGTCTCTGGATCTTTCCCTaGACTTGTCCAAATCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TKTWRMFPENEEIFLCLCLWIFP*TCPNLS Trigger: AGAAAGATTTGGACAAGTCAAGGGAAAGATCCAGAG...ACAGAGACACAGAAATATTTCCTCATTTTCTGGGAACATCCTCCAGGTCTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS-3UTR CAA 90 bp | ACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATGTTTTGAAACCCCCATaGTTCCATTCTCCTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TPMFSHLQNSHTKATYLHVLKPP*FHSPLS Trigger: GGAAAGAGGAGAATGGAACAATGGGGGTTTCAAAAC...ATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS-3UTR CAA 90 bp | CAGAAGCTCTTAAATATGGGAGATGTCATTCTGAGAGTGACTCATGGAGCTTTGTCTCACTTTTGTGTTTaGAAACCCCCATTGTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: QKLLNMGDVILRVTHGALSHFCV*KPPLFH Trigger: ATGGAACAATGGGGGTTTCAAAACACAAAAGTGAGA...CAAAGCTCCATGAGTCACTCTCAGAATGACATCTCCCATATTTAAGAGCTTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS TCA 90 bp | CTATTAGTTTATGTGAAGCTGCATAGTATGGAGGCATCTGATCCATaGTGTTCTGTGCATGCTGCCAATCACCAACTTTTAACAAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLVYVKLHSMEASDP*CSVHAANHQLLTKL Trigger: AAGCTTTGTTAAAAGTTGGTGATTGGCAGCATGCACAGAACATCATGGATCAGATGCCTCCATACTATGCAGCTTCACATAAACTAATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS CCA 90 bp | ATGCAAGCATTGCAGTCCATCAAAGAAAGAGATGGAAGTAATACCTaGTCAGTAATGCTAAGCAAACAGCTAAGGATAACTTCCGTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: MQALQSIKERDGSNT*SVMLSKQLRITSVF Trigger: GAAAACGGAAGTTATCCTTAGCTGTTTGCTTAGCATTACTGACCAGGTATTACTTCCATCTCTTTCTTTGATGGACTGCAATGCTTGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CAA 90 bp | AAAAGGAAGCATTTCAAATGGGGGAAGGGACTTGAAACCCAGGCAGTATTTAATTTAACTGACTTTTGGTaGAACTGCTGTGACTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KRKHFKWGKGLETQAVFNLTDFW*NCCDCL Trigger: CAAACAGTCACAGCAGTTCAACCAAAAGTCAGTTAA...ATTAAATACTGCCTGGGTTTCAAGTCCCTTCCCCCATTTGAAATGCTTCCTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CAA 90 bp | AAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATAACAAAATTGTTGGATaGCTGTGGCTCAGCTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KMGPLHSQFSEIYSGKYNNKIVG*LWLSLP Trigger: TGGCAAGCTGAGCCACAGCAATCCAACAATTTTGTT...ATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CAA 90 bp | AAAAGGAAGCATTTCAAATGGGGGAAGGGACTTGAAACCCAGGCAGTATTTAATAATCAAACAAAATTGTaGGATTGCTGTGGCTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KRKHFKWGKGLETQAVFNNQTKL*DCCGSA Trigger: AGCTGAGCCACAGCAATCCAACAATTTTGTTTGATT...ATTAAATACTGCCTGGGTTTCAAGTCCCTTCCCCCATTTGAAATGCTTCCTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CAA 90 bp | AGAAGGAATGGATTATTGACACATGCTATACCATGGATGACTCTTGATAACAAGATGTCATCCCAGACTTaGGAAACATGTAAGGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: RRNGLLTHAIPWMTLDNKMSSQT*ETCKET Trigger: GGTCTCCTTACATGTTTCCAAAGTCTGGGATGACAT...CTTGTTATCAAGAGTCATCCATGGTATAGCATGTGTCAATAATCCATTCCTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CAA 90 bp | ACAAAGACCTGGAGGATGTTCCCAGAAAATGAGGAAATATTTCTGTGTCTCTGTGTGATGGTCTCATTTTaGGTAGACTTTGCTAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TKTWRMFPENEEIFLCLCVMVSF*VDFAKS Trigger: GCTTTTAGCAAAGTCTACCAAAAATGAGACCATCAC...ACAGAGACACAGAAATATTTCCTCATTTTCTGGGAACATCCTCCAGGTCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS-3UTR CAA 90 bp | AAAAGGAAGCATTTCAAATGGGGGAAGGGACTTGAAACCCAGGCAGTATTTAATCATTTTCAGTGCAGCTaGCAACCGTGTAAATTATGT | + |
|
Preference number: 5 (lower is better) Translates to: KRKHFKWGKGLETQAVFNHFQCS*QPCKLC Trigger: ACATAATTTACACGGTTGCAAGCTGCACTGAAAATG...ATTAAATACTGCCTGGGTTTCAAGTCCCTTCCCCCATTTGAAATGCTTCCTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS-3UTR CAA 90 bp | ACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGTATGATTGGCAACAGCATTCCTaGGAGGAGGATCCTTATGAT | + |
|
Preference number: 5 (lower is better) Translates to: TILRNLLRKIQFRSQLYDWQQHS*EEDPYD Trigger: ATCATAAGGATCCTCCTCCAAGGAATGCTGTTGCCA...ATCATACAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CAA 90 bp | AAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATACTGAGATCTCTCCCTaGATTTATCAGTCTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KMGPLHSQFSEIYSGKYNTEISP*IYQSPQ Trigger: CTGAGGAGACTGATAAATCAAGGGAGAGATCTCAGT...ATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS-3UTR CAA 90 bp | TCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGCACTATTTCCATTGCTaGAATTCCCCTTTGGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SFTILRNLLRKIQFRSQLHYFHC*NSPLVW Trigger: CCACACCAAAGGGGAATTCAAGCAATGGAAATAGTG...CAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CAA 90 bp | GTAACTGAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAATCCTTAACAGCTTTGTaGCTGTTAGAGCCACTATTT | + |
|
Preference number: 5 (lower is better) Translates to: VTENGPASFTILRNLLRKSLTAL*LLEPLF Trigger: AAATAGTGGCTCTAACAGCAACAAAGCTGTTAAGGA...TTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTCAGTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CAA 90 bp | GAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAACTCTGGATCTTTCCCTaGACTTGTCCAAATCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ENGPASFTILRNLLRKIQLWIFP*TCPNLS Trigger: AGAAAGATTTGGACAAGTCAAGGGAAAGATCCAGAG...TTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| CDS-3UTR CAA 90 bp | ACAAAGACCTGGAGGATGTTCCCAGAAAATGAGGAAATATTTCTGTGTCTCTGTTCTCACTTTTGTGTTTaGAAACCCCCATTGTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TKTWRMFPENEEIFLCLCSHFCV*KPPLFH Trigger: ATGGAACAATGGGGGTTTCAAAACACAAAAGTGAGA...ACAGAGACACAGAAATATTTCCTCATTTTCTGGGAACATCCTCCAGGTCTTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| CDS-3UTR CAA 90 bp | CAGAAGCTCTTAAATATGGGAGATGTCATTCTGAGAGTGACTCATGGAGCTTTGCTTTGTCTTTCTCATTaGGATATTGAGACTCACATG | + |
|
Preference number: 5 (lower is better) Translates to: QKLLNMGDVILRVTHGALLCLSH*DIETHM Trigger: CATGTGAGTCTCAATATCCAAATGAGAAAGACAAAG...CAAAGCTCCATGAGTCACTCTCAGAATGACATCTCCCATATTTAAGAGCTTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000145586.8 |
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| CDS-3UTR CAA 90 bp | GAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATGCCTGGATTCCTTTTaGCCACCAGATGAGATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: ENGPASFTILRNLLRKIQCLDSF*PPDEIL Trigger: TAAAATCTCATCTGGTGGCAAAAAGGAATCCAGGCA...TTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| CDS CCA 90 bp | TTTAGGTGTTCTTTCCTTTGTCTCTCTTGCTTTGTCTTCTTTATTTaGCCGCTCTTCCTTCGGTTTTTCTTTACTATCTTTACCAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FRCSFLCLSCFVFFI*PLFLRFFFTIFTKC Trigger: GCACTTGGTAAAGATAGTAAAGAAAAACCGAAGGAAGAGCGGCCAAATAAAGAAGACAAAGCAAGAGAGACAAAGGAAAGAACACCTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000151430.8 |
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| CDS-3UTR CAA 90 bp | CCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATCACAACTCATACAGAGCTaGTTGAAAATCTCTGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PNVFTLTEFTHKGNLSTSQLIQS*LKISVG Trigger: ACCTACAGAGATTTTCAACAAGCTCTGTATGAGTTG...TGATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS-3UTR CAA 90 bp | TCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGATCAATGAGATTAAATaGCAGGAGGACTGCTGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SFTILRNLLRKIQFRSQLINEIK*QEDCCN Trigger: GTTGCAGCAGTCCTCCTGCAATTTAATCTCATTGAT...CAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS-3UTR CAA 90 bp | GAAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAACTATGCGCACGACTTTaGCAAATAAAATGGGATCAT | + |
|
Preference number: 5 (lower is better) Translates to: ENGPASFTILRNLLRKIQLCARL*QIKWDH Trigger: ATGATCCCATTTTATTTGCAAAAGTCGTGCGCATAG...TTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS-3UTR CAA 90 bp | TCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGTCAGACATGCAAGCATaGCAGTCCATCAAAGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SFTILRNLLRKIQFRSQLSDMQA*QSIKER Trigger: TCTTTCTTTGATGGACTGCAATGCTTGCATGTCTGA...CAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS-3UTR CAA 90 bp | GGAATGTCTTGTCAAAAGGATGGTGGTATGTATGCATCTTCTGACTTAAAGCAGCTTTGTCTTTCTCATTaGGATATTGAGACTCACATG | + |
|
Preference number: 5 (lower is better) Translates to: GMSCQKDGGMYASSDLKQLCLSH*DIETHM Trigger: CATGTGAGTCTCAATATCCAAATGAGAAAGACAAAG...CTGCTTTAAGTCAGAAGATGCATACATACCACCATCCTTTTGACAAGACATTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000145586.8 |
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| CDS-3UTR CAA 90 bp | AAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATTGCCTGGATTCCTTTTaGCCACCAGATGAGATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: KMGPLHSQFSEIYSGKYNCLDSF*PPDEIL Trigger: TAAAATCTCATCTGGTGGCAAAAAGGAATCCAGGCA...ATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
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| CDS GCA 90 bp | TCACGGAATTCGCTAATGTCATTAAGAACACTAGATGCCTGTTCGTaGTTTAAATTCCCTTTAATGACATGGTATGACAACTCATACAGA | + |
|
Preference number: 5 (lower is better) Translates to: SRNSLMSLRTLDACS*FKFPLMTWYDNSYR Trigger: TCTGTATGAGTTGTCATACCATGTCATTAAAGGGAATTTAAAGCACGAACAGGCATCTAGTGTTCTTAATGACATTAGCGAATTCCGTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000129915.8 ENSMUST00000152921.2 |
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| CDS-3UTR CAA 90 bp | TTTGTTTCAATATCTAATATGCAGAACACGTCAGCAAGGATAGAAGGCATATCCCAACTCATACAGAGCTaGTTGAAAATCTCTGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: FVSISNMQNTSARIEGISQLIQS*LKISVG Trigger: ACCTACAGAGATTTTCAACAAGCTCTGTATGAGTTG...GGATATGCCTTCTATCCTTGCTGACGTGTTCTGCATATTAGATATTGAAACAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131259.2 |
||
| CDS-3UTR CAA 90 bp | AAAATGGGCCCGCTTCATTCACAATTCTCAGAAATCTACTCAGGAAAATACAATAATATGACACAGTGTTaGTGGCTCACACATACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: KMGPLHSQFSEIYSGKYNNMTQC*WLTHTH Trigger: ATGAGTATGTGTGAGCCACAAACACTGTGTCATATT...ATTGTATTTTCCTGAGTAGATTTCTGAGAATTGTGAATGAAGCGGGCCCATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CAA 90 bp | ACAATTCTCAGAAATCTACTCAGGAAAATACAATTCAGGTCACAGCTGTATGATGGCTTCACATTTTCCTaGGTTAGACGCTTCATGATA | + |
|
Preference number: 5 (lower is better) Translates to: TILRNLLRKIQFRSQLYDGFTFS*VRRFMI Trigger: TATCATGAAGCGTCTAACCAAGGAAAATGTGAAGCC...ATCATACAGCTGTGACCTGAATTGTATTTTCCTGAGTAGATTTCTGAGAATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CAA 90 bp | ACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATTACAGAGCACATCAATaGAAGGCACTCGTTTTATAT | + |
|
Preference number: 5 (lower is better) Translates to: TPMFSHLQNSHTKATYLHYRAHQ*KALVLY Trigger: ATATAAAACGAGTGCCTTCAATTGATGTGCTCTGTA...ATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CAA 90 bp | CCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTACATCATTTGCTAAAAGCCAGTaGTCCTTTTCTAGTTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PNVFTLTEFTHKGNLSTSFAKSQ*SFSSFS Trigger: ACTGAAACTAGAAAAGGACAACTGGCTTTTAGCAAA...TGATGTAGATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS GCA 90 bp | GGAATTCTTACGCTAATGTCATTAAGAACACTAGATGCCTGTTCGTaGTTTAAATTCCCTTTAATGACATGGTATGACAACTCATACAGA | + |
|
Preference number: 5 (lower is better) Translates to: GILTLMSLRTLDACS*FKFPLMTWYDNSYR Trigger: TCTGTATGAGTTGTCATACCATGTCATTAAAGGGAATTTAAAGCACGAACAGGCATCTAGTGTTCTTAATGACATTAGCGTAAGAATTCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131259.2 |
||
| CDS CCA 90 bp | CTTTCAATATTAGTAGGTCAAAACTTTTGCCTGCCTTTAATTGATTaGCTACATACTGAAGAAGACCAGCAAGATCAATCGGGTATTTAC | + |
|
Preference number: 5 (lower is better) Translates to: LSILVGQNFCLPLID*LHTEEDQQDQSGIY Trigger: GTAAATACCCGATTGATCTTGCTGGTCTTCTTCAGTATGTAGCCAATCAATTAAAGGCAGGCAAAAGTTTTGACCTACTAATATTGAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CAA 90 bp | AGAAGGAATGGATTATTGACACATGCTATACCATGGATGACTCTTGATAACAAGACTTTCTCATCATCTTaGTCCTTTTCTTTGTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: RRNGLLTHAIPWMTLDNKTFSSS*SFSLSR Trigger: ACGAGACAAAGAAAAGGACAAAGATGATGAGAAAGT...CTTGTTATCAAGAGTCATCCATGGTATAGCATGTGTCAATAATCCATTCCTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS-3UTR CAA 90 bp | ATAATCACCCCAATGTTTTCACACTTACAGAATTCACACACAAAGGCAACCTATCTTTGTCTTTCTCATTaGGATATTGAGACTCACATG | + |
|
Preference number: 5 (lower is better) Translates to: IITPMFSHLQNSHTKATYLCLSH*DIETHM Trigger: CATGTGAGTCTCAATATCCAAATGAGAAAGACAAAG...ATAGGTTGCCTTTGTGTGTGAATTCTGTAAGTGTGAAAACATTGGGGTGATTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 |
||
| CDS TCA 72 bp | CTTCGGTGCTCTCTTGTTTTGCAAAGCGCTAACCGGTaGGCCCTTAGCACCTTTAGGAACACCAACTCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: LRCSLVLQSANR*ALSTFRNTNSS Trigger: CGAAGAGTTGGTGTTCCTAAAGGTGCTAAGGGCTCACCGGTTAGCGCTTTGCAAAACAAGAGAGCACCGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS CAA 90 bp | TCCCTCCTCAAATCTTCAAAGCTCTCTACTTGCTTCGGTGCTCTCTaGTTTTGCAAAGCGCTAACCGGTGAGCCCTTAGCACCTTTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SLLKSSKLSTCFGAL*FCKALTGEPLAPLG Trigger: TCCTAAAGGTGCTAAGGGCTCACCGGTTAGCGCTTTGCAAAACAAGAGAGCACCGAAGCAAGTAGAGAGCTTTGAAGATTTGAGGAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS GCA 72 bp | TCAAAGCTCTCTACTTGCTTCGGTGCTCTCTTGTTTTaGAAAGCGCTAACCGGTGAGCCCTTAGCACCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SKLSTCFGALLF*KALTGEPLAPL Trigger: TAAAGGTGCTAAGGGCTCACCGGTTAGCGCTTTGCAAAACAAGAGAGCACCGAAGCAAGTAGAGAGCTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS CCA 72 bp | ATGAAGAAGTCCCACCACCAGGCCCATTTTGTACACTaGCAACAGCATTCCTTGGAGGAGGATCCTTATGAT | + |
|
Preference number: 6 (lower is better) Translates to: MKKSHHQAHFVH*QQHSLEEDPYD Trigger: ATCATAAGGATCCTCCTCCAAGGAATGCTGTTGCCAGTGTACAAAATGGGCCTGGTGGTGGGACTTCTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
||
| CDS GCA 72 bp | AAGACCAGCAAGATCAATCGGGTATTTACGGAATACTaGACCACAGAAACTAGCCAGACTCTGAAGCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: KTSKINRVFTEY*TTETSQTLKPA Trigger: AGCTGGCTTCAGAGTCTGGCTAGTTTCTGTGGTGCAGTATTCCGTAAATACCCGATTGATCTTGCTGGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS CAA 72 bp | AAATCTTCAAAGCTCTCTACTTGCTTCGGTGCTCTCTaGTTTTGCAAAGCGCTAACCGGTGAGCCCTTAGCA | + |
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Preference number: 6 (lower is better) Translates to: KSSKLSTCFGAL*FCKALTGEPLA Trigger: TGCTAAGGGCTCACCGGTTAGCGCTTTGCAAAACAAGAGAGCACCGAAGCAAGTAGAGAGCTTTGAAGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS GCA 72 bp | TGGAGGAATGTGATGGAGAAGGATGACTATCAATTTTaGGGCGTTTTTGTTCCCTGTCAGGCTCCGAGATAT | + |
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Preference number: 6 (lower is better) Translates to: WRNVMEKDDYQF*GVFVPCQAPRY Trigger: ATATCTCGGAGCCTGACAGGGAACAAAAACGCCGCAAAATTGATAGTCATCCTTCTCCATCACATTCCTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000124458.8 ENSMUST00000151430.8 |
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| CDS CAA 90 bp | AAGTCCCACCACCAGGCCCATTTTGTACACTGGCAACAGCATTCCTaGGAGGAGGATCCTTATGATGAAATTCATTTTCAGGTATCATGT | + |
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Preference number: 6 (lower is better) Translates to: KSHHQAHFVHWQQHS*EEDPYDEIHFQVSC Trigger: ACATGATACCTGAAAATGAATTTCATCATAAGGATCCTCCTCCAAGGAATGCTGTTGCCAGTGTACAAAATGGGCCTGGTGGTGGGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS TCA 72 bp | CTGTCCTTTACTGTGGAGGAATGTGATGGAGAAGGATaGCTATCAATTTTGCGGCGTTTTTGTTCCCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: LSFTVEECDGEG*LSILRRFCSLS Trigger: TGACAGGGAACAAAAACGCCGCAAAATTGATAGTCATCCTTCTCCATCACATTCCTCCACAGTAAAGGACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS TCA 72 bp | GAGATCGATGAGACTGTCCTTTACTGTGGAGGAATGTaGTGGAGAAGGATGACTATCAATTTTGCGGCGTTT | + |
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Preference number: 6 (lower is better) Translates to: EIDETVLYCGGM*WRRMTINFAAF Trigger: AAACGCCGCAAAATTGATAGTCATCCTTCTCCATCACATTCCTCCACAGTAAAGGACAGTCTCATCGATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS GCA 72 bp | AATACATCCCTCCTCAAATCTTCAAAGCTCTCTACTTaGTTCGGTGCTCTCTTGTTTTGCAAAGCGCTAACC | + |
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Preference number: 6 (lower is better) Translates to: NTSLLKSSKLST*FGALLFCKALT Trigger: GGTTAGCGCTTTGCAAAACAAGAGAGCACCGAAGCAAGTAGAGAGCTTTGAAGATTTGAGGAGGGATGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS CCA 72 bp | ACCAGGCCCATTTTGTACACTGGCAACAGCATTCCTTaGAGGAGGATCCTTATGATGAAATTCATTTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: TRPILYTGNSIP*RRILMMKFIFR Trigger: CCTGAAAATGAATTTCATCATAAGGATCCTCCTCCAAGGAATGCTGTTGCCAGTGTACAAAATGGGCCTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS CAA 72 bp | GAATACATCCCTCCTCAAATCTTCAAAGCTCTCTACTaGCTTCGGTGCTCTCTTGTTTTGCAAAGCGCTAAC | + |
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Preference number: 6 (lower is better) Translates to: EYIPPQIFKALY*LRCSLVLQSAN Trigger: GTTAGCGCTTTGCAAAACAAGAGAGCACCGAAGCAAGTAGAGAGCTTTGAAGATTTGAGGAGGGATGTATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS TCA 72 bp | TATGTGAAGCTGCATAGTATGGAGGCATCTGATCCATaGTGTTCTGTGCATGCTGCCAATCACCAACTTTTA | + |
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Preference number: 6 (lower is better) Translates to: YVKLHSMEASDP*CSVHAANHQLL Trigger: TAAAAGTTGGTGATTGGCAGCATGCACAGAACATCATGGATCAGATGCCTCCATACTATGCAGCTTCACATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS TCA 72 bp | GTAACCTTTACTGTGGAGGAATGTGATGGAGAAGGATaGCTATCAATTTTGCGGCGTTTTTGTTCCCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: VTFTVEECDGEG*LSILRRFCSLS Trigger: TGACAGGGAACAAAAACGCCGCAAAATTGATAGTCATCCTTCTCCATCACATTCCTCCACAGTAAAGGTTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124458.8 |
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| CDS TCA 72 bp | CTAACCTTTACTGTGGAGGAATGTGATGGAGAAGGATaGCTATCAATTTTGCGGCGTTTTTGTTCCCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: LTFTVEECDGEG*LSILRRFCSLS Trigger: TGACAGGGAACAAAAACGCCGCAAAATTGATAGTCATCCTTCTCCATCACATTCCTCCACAGTAAAGGTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151430.8 |
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| CDS CCA 72 bp | ATCTTTACCAAGTGCCCTGGCCTCTGGAGTTGTAGCTaGAGTCTTCTCCTTTTTCTCTTTTTCTTTCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: IFTKCPGLWSCS*SLLLFLFFFLF Trigger: AAAGAGAAAGAAAAAGAGAAAAAGGAGAAGACTCCAGCTACAACTCCAGAGGCCAGGGCACTTGGTAAAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047037.15 ENSMUST00000151430.8 |
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| CDS CAA 72 bp | TTAAACATTCCCCACAGCTCCTCAGACATGCAAGCATaGCAGTCCATCAAAGAAAGAGATGGAAGTAATACC | + |
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Preference number: 6 (lower is better) Translates to: LNIPHSSSDMQA*QSIKERDGSNT Trigger: GGTATTACTTCCATCTCTTTCTTTGATGGACTGCAATGCTTGCATGTCTGAGGAGCTGTGGGGAATGTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS CAA 72 bp | TTAACAGCTTTGTTGCTGTTAGAGCCACTATTTCCATaGCTTGAATTCCCCTTTGGTGTGGTACTAGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: LTALLLLEPLFP*LEFPFGVVLEA Trigger: GGCTTCTAGTACCACACCAAAGGGGAATTCAAGCAATGGAAATAGTGGCTCTAACAGCAACAAAGCTGTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS TCA 72 bp | CATGTGAGAGGTGAGGACCAAGGTAACAGAACATATTaGATACATCCCTCCTCAAATCTTCAAAGCTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: HVRGEDQGNRTY*IHPSSNLQSSL Trigger: TAGAGAGCTTTGAAGATTTGAGGAGGGATGTATTCAATATGTTCTGTTACCTTGGTCCTCACCTCTCACATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS TCA 72 bp | GTACTAGAAGCCTTATTAACAGCTTTTGTACCACACTaGGATCTCTCCCTTGATTTATCAGTCTCCTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: VLEALLTAFVPH*DLSLDLSVSSA Trigger: TGCTGAGGAGACTGATAAATCAAGGGAGAGATCTCAGTGTGGTACAAAAGCTGTTAATAAGGCTTCTAGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS TCA 72 bp | GGGAAGTATATCTGTAACCTTTACTGTGGAGGAATGTaGTGGAGAAGGATGACTATCAATTTTGCGGCGTTT | + |
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Preference number: 6 (lower is better) Translates to: GKYICNLYCGGM*WRRMTINFAAF Trigger: AAACGCCGCAAAATTGATAGTCATCCTTCTCCATCACATTCCTCCACAGTAAAGGTTACAGATATACTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124458.8 |
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| CDS GCA 72 bp | AATCAAACAAAATTGTTGGATTGCTGTGGCTCAGCTTaGCAATTTGTCTTCCTGAAGGCTTCACATTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: NQTKLLDCCGSA*QFVFLKASHFP Trigger: AGGAAAATGTGAAGCCTTCAGGAAGACAAATTGGCAAGCTGAGCCACAGCAATCCAACAATTTTGTTTGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS GCA 72 bp | TCGCTAATGTCATTAAGAACACTAGATGCCTGTTCGTaGTTTAAATTCCCTTTAATGACATGGTATGACAAC | + |
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Preference number: 6 (lower is better) Translates to: SLMSLRTLDACS*FKFPLMTWYDN Trigger: GTTGTCATACCATGTCATTAAAGGGAATTTAAAGCACGAACAGGCATCTAGTGTTCTTAATGACATTAGCGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000047037.15 ENSMUST00000129915.8 ENSMUST00000152921.2 |
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| CDS GCA 72 bp | ACGCTAATGTCATTAAGAACACTAGATGCCTGTTCGTaGTTTAAATTCCCTTTAATGACATGGTATGACAAC | + |
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Preference number: 6 (lower is better) Translates to: TLMSLRTLDACS*FKFPLMTWYDN Trigger: GTTGTCATACCATGTCATTAAAGGGAATTTAAAGCACGAACAGGCATCTAGTGTTCTTAATGACATTAGCGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131259.2 |
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| CDS CAA 90 bp | ATGCTGCATCGTGTGGTGTATGAAACTCATTACAGAGCACATCAATaGAAGGCACTCGTTTTATATAATCTTCTGTACTTAGATTTGATG | + |
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Preference number: 6 (lower is better) Translates to: MLHRVVYETHYRAHQ*KALVLYNLLYLDLM Trigger: CATCAAATCTAAGTACAGAAGATTATATAAAACGAGTGCCTTCAATTGATGTGCTCTGTAATGAGTTTCATACACCACACGATGCAGCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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| CDS CAA 72 bp | CGTGTGGTGTATGAAACTCATTACAGAGCACATCAATaGAAGGCACTCGTTTTATATAATCTTCTGTACTTA | + |
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Preference number: 6 (lower is better) Translates to: RVVYETHYRAHQ*KALVLYNLLYL Trigger: TAAGTACAGAAGATTATATAAAACGAGTGCCTTCAATTGATGTGCTCTGTAATGAGTTTCATACACCACACG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047037.15 |
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