Pregenerated sensors for THNSL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048550Ensembl transcript IDs: ENSMUST00000054591.10, ENSMUST00000102951.2, ENSMUST00000102952.8, ENSMUST00000138914.8, ENSMUST00000138965.8
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTCTGAAAGGTAACCAGAAGCAGACTGTCATGGGCAATAGCAAATaGTGTGAGGAATGCCATCTTGTGGTGGGGAGCAGCCCATTGCAT | + |
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Preference number: 1 (lower is better) Translates to: SLKGNQKQTVMGNSK*CEECHLVVGSSPLH Trigger: ATGCAATGGGCTGCTCCCCACCACAAGATGGCATTCCTCACAGCATTTGCTATTGCCCATGACAGTCTGCTTCTGGTTACCTTTCAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| 3UTR CCA 90 bp | CTGTCATGGGCAATAGCAAATGCTGTGAGGAATGCCATCTTGTGGTaGGGAGCAGCCCATTGCATGTCTTCATTCAGTCACACCCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: LSWAIANAVRNAILW*GAAHCMSSFSHTLQ Trigger: TTGAAGGGTGTGACTGAATGAAGACATGCAATGGGCTGCTCCCCACCACAAGATGGCATTCCTCACAGCATTTGCTATTGCCCATGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| 3UTR CCA 90 bp | AGACTGTCATGGGCAATAGCAAATGCTGTGAGGAATGCCATCTTGTaGTGGGGAGCAGCCCATTGCATGTCTTCATTCAGTCACACCCTT | + |
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Preference number: 1 (lower is better) Translates to: RLSWAIANAVRNAIL*WGAAHCMSSFSHTL Trigger: AAGGGTGTGACTGAATGAAGACATGCAATGGGCTGCTCCCCACCACAAGATGGCATTCCTCACAGCATTTGCTATTGCCCATGACAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| 3UTR CCA 90 bp | GTGCAGAAAATAAAGCATGATAGCAGAGGGTTCCAGGTACTATGCTaGCCTCCGTCTCTTAGTCCAGAGATCAGATGCACACATAAACAT | + |
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Preference number: 1 (lower is better) Translates to: VQKIKHDSRGFQVLC*PPSLSPEIRCTHKH Trigger: ATGTTTATGTGTGCATCTGATCTCTGGACTAAGAGACGGAGGCCAGCATAGTACCTGGAACCCTCTGCTATCATGCTTTATTTTCTGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| 3UTR TCA 90 bp | TTCACTACTTCACAGTTCTGTCAACTGCTACATCCTACATCGGCCTaGTTTTCAAACTTCACCAGCACTAACTACAGACATTCAAAGAGC | + |
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Preference number: 1 (lower is better) Translates to: FTTSQFCQLLHPTSA*FSNFTSTNYRHSKS Trigger: GCTCTTTGAATGTCTGTAGTTAGTGCTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTAGCAGTTGACAGAACTGTGAAGTAGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| 3UTR CAA 90 bp | AGCAGACTGTCATGGGCAATAGCAAATGCTGTGAGGAATGCCATCTaGTGGTGGGGAGCAGCCCATTGCATGTCTTCATTCAGTCACACC | + |
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Preference number: 2 (lower is better) Translates to: SRLSWAIANAVRNAI*WWGAAHCMSSFSHT Trigger: GGTGTGACTGAATGAAGACATGCAATGGGCTGCTCCCCACCACAAGATGGCATTCCTCACAGCATTTGCTATTGCCCATGACAGTCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| 3UTR CAA 90 bp | AGCAAATGCTGTGAGGAATGCCATCTTGTGGTGGGGAGCAGCCCATaGCATGTCTTCATTCAGTCACACCCTTCAATCCAGAAAGTAAAT | + |
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Preference number: 2 (lower is better) Translates to: SKCCEECHLVVGSSP*HVFIQSHPSIQKVN Trigger: ATTTACTTTCTGGATTGAAGGGTGTGACTGAATGAAGACATGCAATGGGCTGCTCCCCACCACAAGATGGCATTCCTCACAGCATTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| 3UTR-3UTR TCA 90 bp | CCTTTTCCTACTGCGTCTACCTTCCTAGGTGCTAAGGATGGAACCCAGGGTTTTACACAGCAATGGAAATaGAACACAGTTACCATTTTG | + |
|
Preference number: 2 (lower is better) Translates to: PFPTASTFLGAKDGTQGFTQQWK*NTVTIL Trigger: CAAAATGGTAACTGTGTTTCATTTCCATTGCTGTGT...AAAACCCTGGGTTCCATCCTTAGCACCTAGGAAGGTAGACGCAGTAGGAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCAACTGCTACATCCTACATCGGCCTGATTTTCAAACTTCACCAGCACTACACGAAATCTCTAGCTaGACAGTGTACATGTCATCA | + |
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Preference number: 2 (lower is better) Translates to: SVNCYILHRPDFQTSPALHEISS*TVYMSS Trigger: TGATGACATGTACACTGTCCAGCTAGAGATTTCGTG...TAGTGCTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTAGCAGTTGACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| 3UTR-3UTR CCA 90 bp | GCCCTAGAACTACATTTTAGAAGCAAAACCAGAGAGCTGATATTAACATGTAAAAATGCCATCTTGTGGTaGGGAGCAGCCCATTGCATG | + |
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Preference number: 2 (lower is better) Translates to: ALELHFRSKTRELILTCKNAILW*GAAHCM Trigger: CATGCAATGGGCTGCTCCCCACCACAAGATGGCATT...TTTACATGTTAATATCAGCTCTCTGGTTTTGCTTCTAAAATGTAGTTCTAGGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| 3UTR-3UTR GCA 90 bp | CAAACTTCACCAGCACTAACTACAGACATTCAAAGAGCAGTGAATGGGCCACGAAGTCCAGAGATCAGATaGACACATAAACATTTACAT | + |
|
Preference number: 2 (lower is better) Translates to: QTSPALTTDIQRAVNGPRSPEIR*THKHLH Trigger: ATGTAAATGTTTATGTGTGCATCTGATCTCTGGACT...TCGTGGCCCATTCACTGCTCTTTGAATGTCTGTAGTTAGTGCTGGTGAAGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCTAGCTGGACAGTGTACATGTCATCAAGTATTGTCCAAAATGGAATTTGAATCCACTCAGAAGTGTTaGGTAAAGGAGAAACTGCCA | + |
|
Preference number: 2 (lower is better) Translates to: SLAGQCTCHQVLSKMEFESTQKC*VKEKLP Trigger: TGGCAGTTTCTCCTTTACCCAACACTTCTGAGTGGA...TTCAAATTCCATTTTGGACAATACTTGATGACATGTACACTGTCCAGCTAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGACAGTGTACATGTCATCAAGTATTGTCCAAAATGGAATTTGAAAGGGGTTAGTCCAGAGATCAGATaGACACATAAACATTTACAT | + |
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Preference number: 2 (lower is better) Translates to: LDSVHVIKYCPKWNLKGVSPEIR*THKHLH Trigger: ATGTAAATGTTTATGTGTGCATCTGATCTCTGGACT...AACCCCTTTCAAATTCCATTTTGGACAATACTTGATGACATGTACACTGTCCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCTAGCTGGACAGTGTACATGTCATCAAGTATTGTCCAAAATGGAATTTGAAAGTCCAGAGATCAGATaGACACATAAACATTTACAT | + |
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Preference number: 2 (lower is better) Translates to: SLAGQCTCHQVLSKMEFESPEIR*THKHLH Trigger: ATGTAAATGTTTATGTGTGCATCTGATCTCTGGACT...TTCAAATTCCATTTTGGACAATACTTGATGACATGTACACTGTCCAGCTAGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| 3UTR GCA 72 bp | GGTAACCAGAAGCAGACTGTCATGGGCAATAGCAAATaGTGTGAGGAATGCCATCTTGTGGTGGGGAGCAGC | + |
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Preference number: 3 (lower is better) Translates to: GNQKQTVMGNSK*CEECHLVVGSS Trigger: GCTGCTCCCCACCACAAGATGGCATTCCTCACAGCATTTGCTATTGCCCATGACAGTCTGCTTCTGGTTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| 3UTR CCA 72 bp | GCAATAGCAAATGCTGTGAGGAATGCCATCTTGTGGTaGGGAGCAGCCCATTGCATGTCTTCATTCAGTCAC | + |
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Preference number: 3 (lower is better) Translates to: AIANAVRNAILW*GAAHCMSSFSH Trigger: GTGACTGAATGAAGACATGCAATGGGCTGCTCCCCACCACAAGATGGCATTCCTCACAGCATTTGCTATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| 3UTR CCA 72 bp | ATAAAGCATGATAGCAGAGGGTTCCAGGTACTATGCTaGCCTCCGTCTCTTAGTCCAGAGATCAGATGCACA | + |
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Preference number: 3 (lower is better) Translates to: IKHDSRGFQVLC*PPSLSPEIRCT Trigger: TGTGCATCTGATCTCTGGACTAAGAGACGGAGGCCAGCATAGTACCTGGAACCCTCTGCTATCATGCTTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| 3UTR-3UTR CAA 90 bp | TACATCCTACATCGGCCTGATTTTCAAACTTCACCAGCACTAACTACAGACATTTTCCACTCAGAAGTGTaGGGTAAAGGAGAAACTGCC | + |
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Preference number: 3 (lower is better) Translates to: YILHRPDFQTSPALTTDIFHSEV*GKGETA Trigger: GGCAGTTTCTCCTTTACCCAACACTTCTGAGTGGAA...AATGTCTGTAGTTAGTGCTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| 3UTR TCA 72 bp | TCACAGTTCTGTCAACTGCTACATCCTACATCGGCCTaGTTTTCAAACTTCACCAGCACTAACTACAGACAT | + |
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Preference number: 3 (lower is better) Translates to: SQFCQLLHPTSA*FSNFTSTNYRH Trigger: ATGTCTGTAGTTAGTGCTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTAGCAGTTGACAGAACTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| 3UTR GCA 72 bp | TTGTTTCCGTGTTCACTACTTCACAGTTCTGTCAACTaGTACATCCTACATCGGCCTGATTTTCAAACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LFPCSLLHSSVN*YILHRPDFQTS Trigger: TGAAGTTTGAAAATCAGGCCGATGTAGGATGTAGCAGTTGACAGAACTGTGAAGTAGTGAACACGGAAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| 3UTR-3UTR CAA 90 bp | TCTCTAGCTGGACAGTGTACATGTCATCAAGTATTGTCCAAAATGGAATTTGAATTCCACTCAGAAGTGTaGGGTAAAGGAGAAACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SLAGQCTCHQVLSKMEFEFHSEV*GKGETA Trigger: GGCAGTTTCTCCTTTACCCAACACTTCTGAGTGGAA...TTCAAATTCCATTTTGGACAATACTTGATGACATGTACACTGTCCAGCTAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| 3UTR TCA 72 bp | ACAATTAAGATCACTGTCACTACACAGCAATGGAAATaGAACACAGTTACCATTTTGTGTGGATTTAGGTAC | + |
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Preference number: 3 (lower is better) Translates to: TIKITVTTQQWK*NTVTILCGFRY Trigger: GTACCTAAATCCACACAAAATGGTAACTGTGTTTCATTTCCATTGCTGTGTAGTGACAGTGATCTTAATTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS-3UTR TCA 90 bp | AGGAATGCCATCTTGTGGTGGGGAGCAGCCCATTGCATGTCTTCATTCAGTCACTGCCAGAAAGGTGCCTaGCAGGGGCAACTTTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: RNAILWWGAAHCMSSFSHCQKGA*QGQLWS Trigger: GCTCCAAAGTTGCCCCTGTCAGGCACCTTTCTGGCA...GTGACTGAATGAAGACATGCAATGGGCTGCTCCCCACCACAAGATGGCATTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS-3UTR CCA 90 bp | GTGGTGGGGAGCAGCCCATTGCATGTCTTCATTCAGTCACACCCTTCAATCCAGGGATTCCCATCATCTTaGCATACACTGCCGCCAACA | + |
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Preference number: 4 (lower is better) Translates to: VVGSSPLHVFIQSHPSIQGFPSS*HTLPPT Trigger: TGTTGGCGGCAGTGTATGCCAAGATGATGGGAATCC...CTGGATTGAAGGGTGTGACTGAATGAAGACATGCAATGGGCTGCTCCCCACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS-3UTR GCA 90 bp | GTGGTGGGGAGCAGCCCATTGCATGTCTTCATTCAGTCACACCCTTCAATCCAGTTCCAAGAGCACCTGTaGTCTTTCTATGTAGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: VVGSSPLHVFIQSHPSIQFQEHL*SFYVGC Trigger: GCAACCTACATAGAAAGAGCACAGGTGCTCTTGGAA...CTGGATTGAAGGGTGTGACTGAATGAAGACATGCAATGGGCTGCTCCCCACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS-3UTR CCA 90 bp | CCTTTTCCTACTGCGTCTACCTTCCTAGGTGCTAAGGATGGAACCCAGGGTTTTTCTCCAACAAGAGAGTaGGTGGAGTGCCATGACTTC | + |
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Preference number: 4 (lower is better) Translates to: PFPTASTFLGAKDGTQGFSPTRE*VECHDF Trigger: GAAGTCATGGCACTCCACCCACTCTCTTGTTGGAGA...AAAACCCTGGGTTCCATCCTTAGCACCTAGGAAGGTAGACGCAGTAGGAAAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS-3UTR TCA 90 bp | ACAGTTCTGTCAACTGCTACATCCTACATCGGCCTGATTTTCAAACTTCACCAGGAGCTGTGGATGCAATaGGCACTGGGCAGCTTTTGT | + |
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Preference number: 4 (lower is better) Translates to: TVLSTATSYIGLIFKLHQELWMQ*ALGSFC Trigger: ACAAAAGCTGCCCAGTGCTCATTGCATCCACAGCTC...CTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTAGCAGTTGACAGAACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS-3UTR GCA 90 bp | TCTGTCAACTGCTACATCCTACATCGGCCTGATTTTCAAACTTCACCAGCACTAGGTAGTGCTGATAGCTaGGAGGCATTCTCCCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: SVNCYILHRPDFQTSPALGSADS*EAFSLR Trigger: TCTGAGGGAGAATGCCTCGCAGCTATCAGCACTACC...TAGTGCTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTAGCAGTTGACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS-3UTR GCA 90 bp | CTGCCATACCAACAAGTGCAGAAAATAAAGCATGATAGCAGAGGGTTCCAGGTAGTAGTGAGCTGTGGATaGAATGAGCACTGGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LPYQQVQKIKHDSRGFQVVVSCG*NEHWAA Trigger: AGCTGCCCAGTGCTCATTGCATCCACAGCTCACTAC...TACCTGGAACCCTCTGCTATCATGCTTTATTTTCTGCACTTGTTGGTATGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS-3UTR GCA 90 bp | TCCACTCAGAAGTGTTGGGTAAAGGAGAAACTGCCATACCAACAAGTGCAGAAAGTAGTGAGCTGTGGATaGAATGAGCACTGGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: STQKCWVKEKLPYQQVQKVVSCG*NEHWAA Trigger: AGCTGCCCAGTGCTCATTGCATCCACAGCTCACTAC...TTTCTGCACTTGTTGGTATGGCAGTTTCTCCTTTACCCAACACTTCTGAGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS-3UTR CCA 90 bp | ACAGTTCTGTCAACTGCTACATCCTACATCGGCCTGATTTTCAAACTTCACCAGCAACAAGAGAGTGGGTaGAGTGCCATGACTTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: TVLSTATSYIGLIFKLHQQQESG*SAMTSL Trigger: CAGGGAAGTCATGGCACTCCACCCACTCTCTTGTTG...CTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTAGCAGTTGACAGAACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS-3UTR TCA 90 bp | CTGCCATACCAACAAGTGCAGAAAATAAAGCATGATAGCAGAGGGTTCCAGGTAACTCCCAGTGTCTCCTaGAGTGGCTACAAGTATCAC | + |
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Preference number: 4 (lower is better) Translates to: LPYQQVQKIKHDSRGFQVTPSVS*SGYKYH Trigger: GTGATACTTGTAGCCACTTCAGGAGACACTGGGAGT...TACCTGGAACCCTCTGCTATCATGCTTTATTTTCTGCACTTGTTGGTATGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS-3UTR GCA 90 bp | TTTTGTTCCACTCAGAAGTGTTGGGTAAAGGAGAAACTGCCATACCAACAAGTGTGTCCGCAGGGTGAATaGACCTTTCCAAGAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: FCSTQKCWVKEKLPYQQVCPQGE*TFPRAP Trigger: AGGTGCTCTTGGAAAGGTGCATTCACCCTGCGGACA...CACTTGTTGGTATGGCAGTTTCTCCTTTACCCAACACTTCTGAGTGGAACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS-3UTR GCA 90 bp | TTCCACTCAGAAGTGTTGGGTAAAGGAGAAACTGCCATACCAACAAGTGCAGAAGCAACAAACTCTTGCTaGAGCTTCTCGACCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: FHSEVLGKGETAIPTSAEATNSC*SFSTSI Trigger: GATGCTGGTCGAGAAGCTGCAGCAAGAGTTTGTTGC...TTCTGCACTTGTTGGTATGGCAGTTTCTCCTTTACCCAACACTTCTGAGTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS-3UTR GCA 90 bp | TCTGTCAACTGCTACATCCTACATCGGCCTGATTTTCAAACTTCACCAGCACTATTAATCCCCAGTGCCTaGATGATAGCAGGGGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: SVNCYILHRPDFQTSPALLIPSA*MIAGAN Trigger: GTTTGCCCCTGCTATCATGCAGGCACTGGGGATTAA...TAGTGCTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTAGCAGTTGACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS-3UTR CCA 90 bp | TTGAAAGGGGTTAAAAACGATGATTCTAATCCTAGTGAGCTTACTACTTCCTCTACGTGCAGAGGCTCGTaGAAGCAGGAGCTGTGTGCG | + |
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Preference number: 4 (lower is better) Translates to: LKGVKNDDSNPSELTTSSTCRGS*KQELCA Trigger: CGCACACAGCTCCTGCTTCCACGAGCCTCTGCACGT...AGAGGAAGTAGTAAGCTCACTAGGATTAGAATCATCGTTTTTAACCCCTTTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS-3UTR GCA 90 bp | TCTGTCAACTGCTACATCCTACATCGGCCTGATTTTCAAACTTCACCAGCACTAGTCTGCAACCACTTTTaGAACAGCGGTATGTGGATC | + |
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Preference number: 4 (lower is better) Translates to: SVNCYILHRPDFQTSPALVCNHF*NSGMWI Trigger: GATCCACATACCGCTGTTGCAAAAGTGGTTGCAGAC...TAGTGCTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTAGCAGTTGACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS-3UTR GCA 90 bp | TCCACTCAGAAGTGTTGGGTAAAGGAGAAACTGCCATACCAACAAGTGCAGAAAGGGCAGCTTTTGTCTTaGATCTTGTCTGCAACCACT | + |
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Preference number: 4 (lower is better) Translates to: STQKCWVKEKLPYQQVQKGQLLS*ILSATT Trigger: AGTGGTTGCAGACAAGATGCAAGACAAAAGCTGCCC...TTTCTGCACTTGTTGGTATGGCAGTTTCTCCTTTACCCAACACTTCTGAGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS-3UTR GCA 90 bp | CTGCCATACCAACAAGTGCAGAAAATAAAGCATGATAGCAGAGGGTTCCAGGTAGGGCAGCTTTTGTCTTaGATCTTGTCTGCAACCACT | + |
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Preference number: 4 (lower is better) Translates to: LPYQQVQKIKHDSRGFQVGQLLS*ILSATT Trigger: AGTGGTTGCAGACAAGATGCAAGACAAAAGCTGCCC...TACCTGGAACCCTCTGCTATCATGCTTTATTTTCTGCACTTGTTGGTATGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS-3UTR GCA 90 bp | TTTTGTTCCACTCAGAAGTGTTGGGTAAAGGAGAAACTGCCATACCAACAAGTGTTAATCCCCAGTGCCTaGATGATAGCAGGGGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: FCSTQKCWVKEKLPYQQVLIPSA*MIAGAN Trigger: GTTTGCCCCTGCTATCATGCAGGCACTGGGGATTAA...CACTTGTTGGTATGGCAGTTTCTCCTTTACCCAACACTTCTGAGTGGAACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS-3UTR TCA 90 bp | CTGGACAGTGTACATGTCATCAAGTATTGTCCAAAATGGAATTTGAAAGGGGTTTGGGATTGGACCCACTaGGGGAAATCACACTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LDSVHVIKYCPKWNLKGVWDWTH*GKSHFQ Trigger: CTGGAAGTGTGATTTCCCTCAGTGGGTCCAATCCCA...AACCCCTTTCAAATTCCATTTTGGACAATACTTGATGACATGTACACTGTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS-3UTR TCA 90 bp | CTGGACAGTGTACATGTCATCAAGTATTGTCCAAAATGGAATTTGAAAGGGGTTGAGCTGTGGATGCAATaGGCACTGGGCAGCTTTTGT | + |
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Preference number: 4 (lower is better) Translates to: LDSVHVIKYCPKWNLKGVELWMQ*ALGSFC Trigger: ACAAAAGCTGCCCAGTGCTCATTGCATCCACAGCTC...AACCCCTTTCAAATTCCATTTTGGACAATACTTGATGACATGTACACTGTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS-3UTR GCA 90 bp | CTGGACAGTGTACATGTCATCAAGTATTGTCCAAAATGGAATTTGAAAGGGGTTGGTAGTGCTGATAGCTaGGAGGCATTCTCCCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: LDSVHVIKYCPKWNLKGVGSADS*EAFSLR Trigger: TCTGAGGGAGAATGCCTCGCAGCTATCAGCACTACC...AACCCCTTTCAAATTCCATTTTGGACAATACTTGATGACATGTACACTGTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS-3UTR GCA 90 bp | ATTTCTCTGAAAGGTAACCAGAAGCAGACTGTCATGGGCAATAGCAAATGCTGTGTCTGCAACCACTTTTaGAACAGCGGTATGTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: ISLKGNQKQTVMGNSKCCVCNHF*NSGMWI Trigger: GATCCACATACCGCTGTTGCAAAAGTGGTTGCAGAC...ACAGCATTTGCTATTGCCCATGACAGTCTGCTTCTGGTTACCTTTCAGAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGTCAACTGCTACATCCTACATCGGCCTGATTTTCAAACTTCACCAGCATCATTTCTCCTAATTTaGCAGCAGGTATGTCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSVNCYILHRPDFQTSPASFLLI*QQVCPQ Trigger: CTGCGGACATACCTGCTGCCAAATTAGGAGAAATGA...TGCTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTAGCAGTTGACAGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR CCA 90 bp | TCTGTCAACTGCTACATCCTACATCGGCCTGATTTTCAAACTTCACCAGCACTATCCCAAAGTTTCCTGTaGGAACACAGACATCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: SVNCYILHRPDFQTSPALSQSFL*EHRHLL Trigger: CAGTAGATGTCTGTGTTCCCACAGGAAACTTTGGGA...TAGTGCTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTAGCAGTTGACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR TCA 90 bp | TTTTGTTCCACTCAGAAGTGTTGGGTAAAGGAGAAACTGCCATACCAACAAGTGATCTGTTTCAAATGGTaGCATCTGGTCAAGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FCSTQKCWVKEKLPYQQVICFKW*HLVKVS Trigger: GCTGACCTTGACCAGATGTCACCATTTGAAACAGAT...CACTTGTTGGTATGGCAGTTTCTCCTTTACCCAACACTTCTGAGTGGAACAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR TCA 90 bp | TCCACTCAGAAGTGTTGGGTAAAGGAGAAACTGCCATACCAACAAGTGCAGAAACATGCCTTGTTGAAATaGATGTCTCTGAATCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: STQKCWVKEKLPYQQVQKHALLK*MSLNPR Trigger: ACGTGGATTCAGAGACATTCATTTCAACAAGGCATG...TTTCTGCACTTGTTGGTATGGCAGTTTCTCCTTTACCCAACACTTCTGAGTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR TCA 90 bp | TACATCCTACATCGGCCTGATTTTCAAACTTCACCAGCACTAACTACAGACATTAACTCCAAGATGAACTaGTTGCCAGAAAGGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YILHRPDFQTSPALTTDINSKMN*LPERCL Trigger: CAGGCACCTTTCTGGCAATCAGTTCATCTTGGAGTT...AATGTCTGTAGTTAGTGCTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR TCA 90 bp | TTCCACTCAGAAGTGTTGGGTAAAGGAGAAACTGCCATACCAACAAGTGCAGAAGCAAAAATCAAAATCTaGCCTGACACCTATTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FHSEVLGKGETAIPTSAEAKIKI*PDTYCP Trigger: TGGGCAATAGGTGTCAGGTCAGATTTTGATTTTTGC...TTCTGCACTTGTTGGTATGGCAGTTTCTCCTTTACCCAACACTTCTGAGTGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR TCA 90 bp | TTGAAAGGGGTTAAAAACGATGATTCTAATCCTAGTGAGCTTACTACTTCCTCTGAGCTGTGGATGCAATaGGCACTGGGCAGCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LKGVKNDDSNPSELTTSSELWMQ*ALGSFC Trigger: ACAAAAGCTGCCCAGTGCTCATTGCATCCACAGCTC...AGAGGAAGTAGTAAGCTCACTAGGATTAGAATCATCGTTTTTAACCCCTTTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR TCA 90 bp | TTCCACTCAGAAGTGTTGGGTAAAGGAGAAACTGCCATACCAACAAGTGCAGAAATGAGTTTTTCTGCATaGCTCTTCAGGACATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: FHSEVLGKGETAIPTSAEMSFSA*LFRTST Trigger: TGTGGATGTCCTGAAGAGTCATGCAGAAAAACTCAT...TTCTGCACTTGTTGGTATGGCAGTTTCTCCTTTACCCAACACTTCTGAGTGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR GCA 90 bp | CAAACTTCACCAGCACTAACTACAGACATTCAAAGAGCAGTGAATGGGCCACGATCATTACCAACATCCTaGAATTTTTCAGATGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QTSPALTTDIQRAVNGPRSLPTS*NFSDAL Trigger: GAGCGCATCTGAAAAATTGCAGGATGTTGGTAATGA...TCGTGGCCCATTCACTGCTCTTTGAATGTCTGTAGTTAGTGCTGGTGAAGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR GCA 90 bp | TCTGTCAACTGCTACATCCTACATCGGCCTGATTTTCAAACTTCACCAGCACTACCATTTTTCTTCAGATaGCACATGCTAGCATCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SVNCYILHRPDFQTSPALPFFFR*HMLASC Trigger: GCATGATGCTAGCATGTGGCATCTGAAGAAAAATGG...TAGTGCTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTAGCAGTTGACAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR GCA 90 bp | TCTCTAGCTGGACAGTGTACATGTCATCAAGTATTGTCCAAAATGGAATTTGAACGAGTCTCTCAGAGATaGTCCAGTGTTCTGGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLAGQCTCHQVLSKMEFERVSQR*SSVLAN Trigger: GTTGGCCAGAACACTGGAGCATCTCTGAGAGACTCG...TTCAAATTCCATTTTGGACAATACTTGATGACATGTACACTGTCCAGCTAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR GCA 90 bp | TTGAAAGGGGTTAAAAACGATGATTCTAATCCTAGTGAGCTTACTACTTCCTCTGTAGTGAGCTGTGGATaGAATGAGCACTGGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKGVKNDDSNPSELTTSSVVSCG*NEHWAA Trigger: AGCTGCCCAGTGCTCATTGCATCCACAGCTCACTAC...AGAGGAAGTAGTAAGCTCACTAGGATTAGAATCATCGTTTTTAACCCCTTTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR GCA 90 bp | TCCACTCAGAAGTGTTGGGTAAAGGAGAAACTGCCATACCAACAAGTGCAGAAATCCATCTTCTCCTTCTaGTTCATTCTCTCTAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: STQKCWVKEKLPYQQVQKSIFSF*FILSSR Trigger: TCTGCTAGAGAGAATGAAGCAGAAGGAGAAGATGGA...TTTCTGCACTTGTTGGTATGGCAGTTTCTCCTTTACCCAACACTTCTGAGTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTTCTGTCAACTGCTACATCCTACATCGGCCTGATTTTCAAACTTCACCAGTCCATCTTCTCCTTCTaGTTCATTCTCTCTAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TVLSTATSYIGLIFKLHQSIFSF*FILSSR Trigger: TCTGCTAGAGAGAATGAAGCAGAAGGAGAAGATGGA...CTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTAGCAGTTGACAGAACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCTCTGAAAGGTAACCAGAAGCAGACTGTCATGGGCAATAGCAAATGCTGTAATCAAAATCTGACCTaGCACCTATTGCCCAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: ISLKGNQKQTVMGNSKCCNQNLT*HLLPNH Trigger: ATGGTTGGGCAATAGGTGTCAGGTCAGATTTTGATT...ACAGCATTTGCTATTGCCCATGACAGTCTGCTTCTGGTTACCTTTCAGAGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR TCA 90 bp | TCCACTCAGAAGTGTTGGGTAAAGGAGAAACTGCCATACCAACAAGTGCAGAAAGTCAAAACGTGGTTCTaGTTAGAGGCACAGATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: STQKCWVKEKLPYQQVQKVKTWF*LEAQIN Trigger: ATTTATCTGTGCCTCTAATCAGAACCACGTTTTGAC...TTTCTGCACTTGTTGGTATGGCAGTTTCTCCTTTACCCAACACTTCTGAGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTAGCTGGACAGTGTACATGTCATCAAGTATTGTCCAAAATGGAATTTGAAGCAACAAACTCTTGCTaGAGCTTCTCGACCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SLAGQCTCHQVLSKMEFEATNSC*SFSTSI Trigger: GATGCTGGTCGAGAAGCTGCAGCAAGAGTTTGTTGC...TTCAAATTCCATTTTGGACAATACTTGATGACATGTACACTGTCCAGCTAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR GCA 90 bp | TTGAAAGGGGTTAAAAACGATGATTCTAATCCTAGTGAGCTTACTACTTCCTCTGCAACAAACTCTTGCTaGAGCTTCTCGACCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LKGVKNDDSNPSELTTSSATNSC*SFSTSI Trigger: GATGCTGGTCGAGAAGCTGCAGCAAGAGTTTGTTGC...AGAGGAAGTAGTAAGCTCACTAGGATTAGAATCATCGTTTTTAACCCCTTTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR CCA 90 bp | CAAACTTCACCAGCACTAACTACAGACATTCAAAGAGCAGTGAATGGGCCACGAATAATTGCAACCTGGTaGGATACAGTAGGCAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QTSPALTTDIQRAVNGPRIIATW*DTVGKN Trigger: ATTTTTGCCTACTGTATCCCACCAGGTTGCAATTAT...TCGTGGCCCATTCACTGCTCTTTGAATGTCTGTAGTTAGTGCTGGTGAAGTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR TCA 90 bp | TTTTGTTCCACTCAGAAGTGTTGGGTAAAGGAGAAACTGCCATACCAACAAGTGGTCAAAACGTGGTTCTaGTTAGAGGCACAGATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FCSTQKCWVKEKLPYQQVVKTWF*LEAQIN Trigger: ATTTATCTGTGCCTCTAATCAGAACCACGTTTTGAC...CACTTGTTGGTATGGCAGTTTCTCCTTTACCCAACACTTCTGAGTGGAACAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR GCA 90 bp | AACGATGATTCTAATCCTAGTGAGCTTACTACTTCCTCTATGTTAGCTAACTATAGAGAGTGGGTGGAGTaGCATGACTTCCCTGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: NDDSNPSELTTSSMLANYREWVE*HDFPDS Trigger: AGAATCAGGGAAGTCATGGCACTCCACCCACTCTCT...ATAGTTAGCTAACATAGAGGAAGTAGTAAGCTCACTAGGATTAGAATCATCGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR GCA 90 bp | TTTTGTTCCACTCAGAAGTGTTGGGTAAAGGAGAAACTGCCATACCAACAAGTGCTGCAATTTTTCAGATaGGCTCATATTCCAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FCSTQKCWVKEKLPYQQVLQFFR*AHIPGF Trigger: AAAGCCTGGAATATGAGCGCATCTGAAAAATTGCAG...CACTTGTTGGTATGGCAGTTTCTCCTTTACCCAACACTTCTGAGTGGAACAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR GCA 90 bp | GCCCTAGAACTACATTTTAGAAGCAAAACCAGAGAGCTGATATTAACATGTAAACACATGCTAGCATCATaGATGGGATTGGACCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ALELHFRSKTRELILTCKHMLAS*MGLDPL Trigger: CAGTGGGTCCAATCCCATGCATGATGCTAGCATGTG...TTTACATGTTAATATCAGCTCTCTGGTTTTGCTTCTAAAATGTAGTTCTAGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR GCA 90 bp | AGTTCTGTCAACTGCTACATCCTACATCGGCCTGATTTTCAAACTTCACCAGCAACTGCCAATTATCTCTaGTTTCTGGAAATCACTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSVNCYILHRPDFQTSPATANYL*FLEITN Trigger: GTTAGTGATTTCCAGAAAGCAGAGATAATTGGCAGT...TGCTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTAGCAGTTGACAGAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR GCA 90 bp | TTGAAAGGGGTTAAAAACGATGATTCTAATCCTAGTGAGCTTACTACTTCCTCTGTCTGCAACCACTTTTaGAACAGCGGTATGTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LKGVKNDDSNPSELTTSSVCNHF*NSGMWI Trigger: GATCCACATACCGCTGTTGCAAAAGTGGTTGCAGAC...AGAGGAAGTAGTAAGCTCACTAGGATTAGAATCATCGTTTTTAACCCCTTTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR GCA 90 bp | TGCTATGCTAAATACCAGATATTTTGTTCCACTCAGAAGTGTTGGGTAAAGGAGGTCTTGCATCTTGTCTaGAACCACTTTTGCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: CYAKYQIFCSTQKCWVKEVLHLV*NHFCNS Trigger: GCTGTTGCAAAAGTGGTTGCAGACAAGATGCAAGAC...CTCCTTTACCCAACACTTCTGAGTGGAACAAAATATCTGGTATTTAGCATAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTCAACTGCTACATCCTACATCGGCCTGATTTTCAAACTTCACCAGCACTAATTATCTCTGCTTTCTaGAAATCACTAACTCCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVNCYILHRPDFQTSPALIISAF*KSLTPF Trigger: GAACGGAGTTAGTGATTTCCAGAAAGCAGAGATAAT...TAGTGCTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTAGCAGTTGACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR TCA 90 bp | TTTTGTTCCACTCAGAAGTGTTGGGTAAAGGAGAAACTGCCATACCAACAAGTGAATGTCCAGTTTTTATaGAGTCAGTCAAAACGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FCSTQKCWVKEKLPYQQVNVQFL*SQSKRG Trigger: ACCACGTTTTGACTGACTTCATAAAAACTGGACATT...CACTTGTTGGTATGGCAGTTTCTCCTTTACCCAACACTTCTGAGTGGAACAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR GCA 90 bp | TTGAAAGGGGTTAAAAACGATGATTCTAATCCTAGTGAGCTTACTACTTCCTCTGTCTTGCATCTTGTCTaGAACCACTTTTGCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKGVKNDDSNPSELTTSSVLHLV*NHFCNS Trigger: GCTGTTGCAAAAGTGGTTGCAGACAAGATGCAAGAC...AGAGGAAGTAGTAAGCTCACTAGGATTAGAATCATCGTTTTTAACCCCTTTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR GCA 90 bp | CTGGACAGTGTACATGTCATCAAGTATTGTCCAAAATGGAATTTGAAAGGGGTTTCCATCTTCTCCTTCTaGTTCATTCTCTCTAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LDSVHVIKYCPKWNLKGVSIFSF*FILSSR Trigger: TCTGCTAGAGAGAATGAAGCAGAAGGAGAAGATGGA...AACCCCTTTCAAATTCCATTTTGGACAATACTTGATGACATGTACACTGTCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR TCA 90 bp | TACATCCTACATCGGCCTGATTTTCAAACTTCACCAGCACTAACTACAGACATTAATGTCCAGTTTTTATaGAGTCAGTCAAAACGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YILHRPDFQTSPALTTDINVQFL*SQSKRG Trigger: ACCACGTTTTGACTGACTTCATAAAAACTGGACATT...AATGTCTGTAGTTAGTGCTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR TCA 90 bp | CTGGACAGTGTACATGTCATCAAGTATTGTCCAAAATGGAATTTGAAAGGGGTTATCCAAAATATAGCCTaGTGCATTGTAGGTAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LDSVHVIKYCPKWNLKGVIQNIA*CIVGSA Trigger: AGCACTACCTACAATGCATCAGGCTATATTTTGGAT...AACCCCTTTCAAATTCCATTTTGGACAATACTTGATGACATGTACACTGTCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR TCA 90 bp | TTGAAAGGGGTTAAAAACGATGATTCTAATCCTAGTGAGCTTACTACTTCCTCTATGAGTTTTTCTGCATaGCTCTTCAGGACATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LKGVKNDDSNPSELTTSSMSFSA*LFRTST Trigger: TGTGGATGTCCTGAAGAGTCATGCAGAAAAACTCAT...AGAGGAAGTAGTAAGCTCACTAGGATTAGAATCATCGTTTTTAACCCCTTTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR GCA 90 bp | CACAGCAATGGAAATGAAACACAGTTACCATTTTGTGTGGATTTAGGTACCCCACATTTTCTCTCTGACTaGCAATTATCTCTGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSNGNETQLPFCVDLGTPHFLSD*QLSLLS Trigger: AGAAAGCAGAGATAATTGGCAGTCAGAGAGAAAATG...TGGGGTACCTAAATCCACACAAAATGGTAACTGTGTTTCATTTCCATTGCTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR GCA 90 bp | TACATCCTACATCGGCCTGATTTTCAAACTTCACCAGCACTAACTACAGACATTAACAAGCTCAAGGTATaGAGAGGCATGATAAACTAT | + |
|
Preference number: 4 (lower is better) Translates to: YILHRPDFQTSPALTTDINKLKV*RGMINY Trigger: ATAGTTTATCATGCCTCTGCATACCTTGAGCTTGTT...AATGTCTGTAGTTAGTGCTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR GCA 90 bp | AACGATGATTCTAATCCTAGTGAGCTTACTACTTCCTCTATGTTAGCTAACTATGTCTTGCATCTTGTCTaGAACCACTTTTGCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NDDSNPSELTTSSMLANYVLHLV*NHFCNS Trigger: GCTGTTGCAAAAGTGGTTGCAGACAAGATGCAAGAC...ATAGTTAGCTAACATAGAGGAAGTAGTAAGCTCACTAGGATTAGAATCATCGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTAGCTGGACAGTGTACATGTCATCAAGTATTGTCCAAAATGGAATTTGAAGATGCTCCAGTGTTCTaGCCAACAATCCTATCAATT | + |
|
Preference number: 4 (lower is better) Translates to: SLAGQCTCHQVLSKMEFEDAPVF*PTILSI Trigger: AATTGATAGGATTGTTGGCCAGAACACTGGAGCATC...TTCAAATTCCATTTTGGACAATACTTGATGACATGTACACTGTCCAGCTAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR CCA 90 bp | TCTCTAGCTGGACAGTGTACATGTCATCAAGTATTGTCCAAAATGGAATTTGAACACATAATTGCAACCTaGTGGGATACAGTAGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLAGQCTCHQVLSKMEFEHIIAT*WDTVGK Trigger: TTTGCCTACTGTATCCCACCAGGTTGCAATTATGTG...TTCAAATTCCATTTTGGACAATACTTGATGACATGTACACTGTCCAGCTAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR TCA 90 bp | TTGAAAGGGGTTAAAAACGATGATTCTAATCCTAGTGAGCTTACTACTTCCTCTGTCAAAACGTGGTTCTaGTTAGAGGCACAGATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LKGVKNDDSNPSELTTSSVKTWF*LEAQIN Trigger: ATTTATCTGTGCCTCTAATCAGAACCACGTTTTGAC...AGAGGAAGTAGTAAGCTCACTAGGATTAGAATCATCGTTTTTAACCCCTTTCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR TCA 90 bp | CTGGACAGTGTACATGTCATCAAGTATTGTCCAAAATGGAATTTGAAAGGGGTTAATGTCCAGTTTTTATaGAGTCAGTCAAAACGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LDSVHVIKYCPKWNLKGVNVQFL*SQSKRG Trigger: ACCACGTTTTGACTGACTTCATAAAAACTGGACATT...AACCCCTTTCAAATTCCATTTTGGACAATACTTGATGACATGTACACTGTCCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTAGCTGGACAGTGTACATGTCATCAAGTATTGTCCAAAATGGAATTTGAAATCCAAAATATAGCCTaGTGCATTGTAGGTAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLAGQCTCHQVLSKMEFEIQNIA*CIVGSA Trigger: AGCACTACCTACAATGCATCAGGCTATATTTTGGAT...TTCAAATTCCATTTTGGACAATACTTGATGACATGTACACTGTCCAGCTAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR TCA 90 bp | AACGATGATTCTAATCCTAGTGAGCTTACTACTTCCTCTATGTTAGCTAACTATATGAGTTTTTCTGCATaGCTCTTCAGGACATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: NDDSNPSELTTSSMLANYMSFSA*LFRTST Trigger: TGTGGATGTCCTGAAGAGTCATGCAGAAAAACTCAT...ATAGTTAGCTAACATAGAGGAAGTAGTAAGCTCACTAGGATTAGAATCATCGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR CCA 90 bp | CACAGCAATGGAAATGAAACACAGTTACCATTTTGTGTGGATTTAGGTACCCCAACTGAAGTATTTTGGTaGAAACTTCTTGTCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: HSNGNETQLPFCVDLGTPTEVFW*KLLVMI Trigger: GATCATGACAAGAAGTTTCCACCAAAATACTTCAGT...TGGGGTACCTAAATCCACACAAAATGGTAACTGTGTTTCATTTCCATTGCTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR CCA 90 bp | TCTCTAGCTGGACAGTGTACATGTCATCAAGTATTGTCCAAAATGGAATTTGAACAGTGTCTCCTGAAGTaGCTACAAGTATCACATAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLAGQCTCHQVLSKMEFEQCLLK*LQVSHN Trigger: ATTATGTGATACTTGTAGCCACTTCAGGAGACACTG...TTCAAATTCCATTTTGGACAATACTTGATGACATGTACACTGTCCAGCTAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR TCA 90 bp | AACGATGATTCTAATCCTAGTGAGCTTACTACTTCCTCTATGTTAGCTAACTATATCCAAAATATAGCCTaGTGCATTGTAGGTAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NDDSNPSELTTSSMLANYIQNIA*CIVGSA Trigger: AGCACTACCTACAATGCATCAGGCTATATTTTGGAT...ATAGTTAGCTAACATAGAGGAAGTAGTAAGCTCACTAGGATTAGAATCATCGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR GCA 90 bp | GCCCTAGAACTACATTTTAGAAGCAAAACCAGAGAGCTGATATTAACATGTAAATGTCACCTAATATTCTaGCAACTGTTGTTTTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALELHFRSKTRELILTCKCHLIF*QLLFSQ Trigger: CTGGGAAAACAACAGTTGGCAGAATATTAGGTGACA...TTTACATGTTAATATCAGCTCTCTGGTTTTGCTTCTAAAATGTAGTTCTAGGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR GCA 90 bp | GCCCTAGAACTACATTTTAGAAGCAAAACCAGAGAGCTGATATTAACATGTAAACAAGTATCACATAATTaGAACCTGGTGGGATACAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALELHFRSKTRELILTCKQVSHN*NLVGYS Trigger: ACTGTATCCCACCAGGTTGCAATTATGTGATACTTG...TTTACATGTTAATATCAGCTCTCTGGTTTTGCTTCTAAAATGTAGTTCTAGGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR CCA 90 bp | TTGAAAGGGGTTAAAAACGATGATTCTAATCCTAGTGAGCTTACTACTTCCTCTTTCACTGAAGTATTTTaGTGGAAACTTCTTGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LKGVKNDDSNPSELTTSSFTEVF*WKLLVM Trigger: CATGACAAGAAGTTTCCACCAAAATACTTCAGTGAA...AGAGGAAGTAGTAAGCTCACTAGGATTAGAATCATCGTTTTTAACCCCTTTCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| 3UTR CAA 72 bp | GTGTTTCAAGTATTGTTTGTTTGTTTGTTTGTTTGTTaGTTTGTTTTAAACAGGACCTCATGTATCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VFQVLFVCLFVC*FVLNRTSCIPG Trigger: GCCTGGGATACATGAGGTCCTGTTTAAAACAAACAAACAAACAAACAAACAAACAAACAATACTTGAAACAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS GCA 90 bp | TCTGCACGTGCAGAGGCTCGTGGAAGCAGGAGCTGTGTGCGGCTCTaGACTTTAACCAGCAGGCTAGAAAGACACTCCTGTGCTATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SARAEARGSRSCVRL*TLTSRLERHSCAIC Trigger: ACAGATAGCACAGGAGTGTCTTTCTAGCCTGCTGGTTAAAGTGCAGAGCCGCACACAGCTCCTGCTTCCACGAGCCTCTGCACGTGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS GCA 90 bp | TGCCTGCATGATAGCAGGGGCAAACTTGGAGTAGTGAGCTGTGGATaGAATGAGCACTGGGCAGCTTTTGTCTTGCATCTTGTCTGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: CLHDSRGKLGVVSCG*NEHWAAFVLHLVCN Trigger: GTTGCAGACAAGATGCAAGACAAAAGCTGCCCAGTGCTCATTGCATCCACAGCTCACTACTCCAAGTTTGCCCCTGCTATCATGCAGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR CAA 90 bp | GTGGTGGGGAGCAGCCCATTGCATGTCTTCATTCAGTCACACCCTTCAATCCAGATATTCTGCCAACTGTaGTTTTCCCAGAACCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VVGSSPLHVFIQSHPSIQIFCQL*FSQNQA Trigger: CGCCTGGTTCTGGGAAAACAACAGTTGGCAGAATAT...CTGGATTGAAGGGTGTGACTGAATGAAGACATGCAATGGGCTGCTCCCCACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR CAA 90 bp | ACAGTTCTGTCAACTGCTACATCCTACATCGGCCTGATTTTCAAACTTCACCAGGTCGGCAACAAACTCTaGCTGCAGCTTCTCGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: TVLSTATSYIGLIFKLHQVGNKL*LQLLDQ Trigger: CTGGTCGAGAAGCTGCAGCAAGAGTTTGTTGCCGAC...CTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTAGCAGTTGACAGAACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCTGTCAACTGCTACATCCTACATCGGCCTGATTTTCAAACTTCACCAGCAGTCGGCAACAAACTCTaGCTGCAGCTTCTCGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSVNCYILHRPDFQTSPAVGNKL*LQLLDQ Trigger: CTGGTCGAGAAGCTGCAGCAAGAGTTTGTTGCCGAC...TGCTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTAGCAGTTGACAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS TCA 90 bp | TGCAACCACTTTTGCAACAGCGGTATGTGGATCCAAAATATAGCCTaGTGCATTGTAGGTAGTGCTGATAGCTGCGAGGCATTCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: CNHFCNSGMWIQNIA*CIVGSADSCEAFSL Trigger: GAGGGAGAATGCCTCGCAGCTATCAGCACTACCTACAATGCATCAGGCTATATTTTGGATCCACATACCGCTGTTGCAAAAGTGGTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS GCA 90 bp | CAATCATTTCTCCTAATTTGGCAGCAGGTATGTCCGCAGGGTGAATaGACCTTTCCAAGAGCACCTGTGCTCTTTCTATGTAGGTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QSFLLIWQQVCPQGE*TFPRAPVLFLCRLL Trigger: GAGCAACCTACATAGAAAGAGCACAGGTGCTCTTGGAAAGGTGCATTCACCCTGCGGACATACCTGCTGCCAAATTAGGAGAAATGATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR CAA 90 bp | TTCCACTCAGAAGTGTTGGGTAAAGGAGAAACTGCCATACCAACAAGTGCAGAACTGACAGGGGCAACTTaGGAGCAGGCAAAGTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FHSEVLGKGETAIPTSAELTGAT*EQAKFS Trigger: GGAAAACTTTGCCTGCTCCAAAGTTGCCCCTGTCAG...TTCTGCACTTGTTGGTATGGCAGTTTCTCCTTTACCCAACACTTCTGAGTGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR CAA 90 bp | ATTTCTCTGAAAGGTAACCAGAAGCAGACTGTCATGGGCAATAGCAAATGCTGTGGGATTCCCATCATCTaGGCATACACTGCCGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ISLKGNQKQTVMGNSKCCGIPII*AYTAAN Trigger: GTTGGCGGCAGTGTATGCCAAGATGATGGGAATCCC...ACAGCATTTGCTATTGCCCATGACAGTCTGCTTCTGGTTACCTTTCAGAGAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR CAA 90 bp | ATTTCTCTGAAAGGTAACCAGAAGCAGACTGTCATGGGCAATAGCAAATGCTGTGCATCATGCATGGGATaGGACCCACTGAGGGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: ISLKGNQKQTVMGNSKCCASCMG*DPLREI Trigger: GATTTCCCTCAGTGGGTCCAATCCCATGCATGATGC...ACAGCATTTGCTATTGCCCATGACAGTCTGCTTCTGGTTACCTTTCAGAGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR CAA 90 bp | TACATCCTACATCGGCCTGATTTTCAAACTTCACCAGCACTAACTACAGACATTGTCGGCAACAAACTCTaGCTGCAGCTTCTCGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: YILHRPDFQTSPALTTDIVGNKL*LQLLDQ Trigger: CTGGTCGAGAAGCTGCAGCAAGAGTTTGTTGCCGAC...AATGTCTGTAGTTAGTGCTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR CAA 90 bp | TCCACTCAGAAGTGTTGGGTAAAGGAGAAACTGCCATACCAACAAGTGCAGAAATGGGCAGCTTTTGTCTaGCATCTTGTCTGCAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: STQKCWVKEKLPYQQVQKWAAFV*HLVCNH Trigger: GTGGTTGCAGACAAGATGCAAGACAAAAGCTGCCCA...TTTCTGCACTTGTTGGTATGGCAGTTTCTCCTTTACCCAACACTTCTGAGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCATACCAACAAGTGCAGAAAATAAAGCATGATAGCAGAGGGTTCCAGGTATGGGCAGCTTTTGTCTaGCATCTTGTCTGCAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LPYQQVQKIKHDSRGFQVWAAFV*HLVCNH Trigger: GTGGTTGCAGACAAGATGCAAGACAAAAGCTGCCCA...TACCTGGAACCCTCTGCTATCATGCTTTATTTTCTGCACTTGTTGGTATGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR CAA 90 bp | TCCACTCAGAAGTGTTGGGTAAAGGAGAAACTGCCATACCAACAAGTGCAGAAAAGCACTGGGCAGCTTTaGTCTTGCATCTTGTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: STQKCWVKEKLPYQQVQKSTGQL*SCILSA Trigger: TGCAGACAAGATGCAAGACAAAAGCTGCCCAGTGCT...TTTCTGCACTTGTTGGTATGGCAGTTTCTCCTTTACCCAACACTTCTGAGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR CAA 90 bp | TTCCACTCAGAAGTGTTGGGTAAAGGAGAAACTGCCATACCAACAAGTGCAGAAAGCACTGGGCAGCTTTaGTCTTGCATCTTGTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: FHSEVLGKGETAIPTSAESTGQL*SCILSA Trigger: TGCAGACAAGATGCAAGACAAAAGCTGCCCAGTGCT...TTCTGCACTTGTTGGTATGGCAGTTTCTCCTTTACCCAACACTTCTGAGTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCTGTCAACTGCTACATCCTACATCGGCCTGATTTTCAAACTTCACCAGCACTGGACGACGTCTGGTaGAGTTCTTTAATCCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSVNCYILHRPDFQTSPALDDVW*SSLIPS Trigger: ACTGGGGATTAAAGAACTCAACCAGACGTCGTCCAG...TGCTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTAGCAGTTGACAGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS GCA 90 bp | ACAGATAAATTTTCGAATAGGGATTCCCATCATCTTGGCATACACTaGCGCCAACACGTTCCCAAAGTTTCCTGTGGGAACACAGACATC | + |
|
Preference number: 5 (lower is better) Translates to: TDKFSNRDSHHLGIH*RQHVPKVSCGNTDI Trigger: GATGTCTGTGTTCCCACAGGAAACTTTGGGAACGTGTTGGCGGCAGTGTATGCCAAGATGATGGGAATCCCTATTCGAAAATTTATCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR CAA 90 bp | TCTGTCAACTGCTACATCCTACATCGGCCTGATTTTCAAACTTCACCAGCACTATGTCTGCAACCACTTTaGCAACAGCGGTATGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SVNCYILHRPDFQTSPALCLQPL*QQRYVD Trigger: ATCCACATACCGCTGTTGCAAAAGTGGTTGCAGACA...TAGTGCTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTAGCAGTTGACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS TCA 90 bp | CGCTCATATTCCAGGCTTTCTCAAGGACATCACTATCTACATCGATaGCACAACAGCCTAGTTTGTCACCTAATATTCTGCCAACTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RSYSRLSQGHHYLHR*HNSLVCHLIFCQLL Trigger: CAACAGTTGGCAGAATATTAGGTGACAAACTAGGCTGTTGTGTCATCGATGTAGATAGTGATGTCCTTGAGAAAGCCTGGAATATGAGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS GCA 90 bp | TATACAACAATTCCATTTTTCTTCAGATGCCACATGCTAGCATCATaGATGGGATTGGACCCACTGAGGGAAATCACACTTCCAGATGCA | + |
|
Preference number: 5 (lower is better) Translates to: YTTIPFFFRCHMLAS*MGLDPLREITLPDA Trigger: TGCATCTGGAAGTGTGATTTCCCTCAGTGGGTCCAATCCCATGCATGATGCTAGCATGTGGCATCTGAAGAAAAATGGAATTGTTGTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS CCA 90 bp | AGTCTTACGTGCTTCAGCGAGTCTCTCAGAGATGCTCCAGTGTTCTaGCCAACAATCCTATCAATTCTCATTGATTTCAGACGACTAATT | + |
|
Preference number: 5 (lower is better) Translates to: SLTCFSESLRDAPVF*PTILSILIDFRRLI Trigger: AATTAGTCGTCTGAAATCAATGAGAATTGATAGGATTGTTGGCCAGAACACTGGAGCATCTCTGAGAGACTCGCTGAAGCACGTAAGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR CAA 90 bp | ATTTCTCTGAAAGGTAACCAGAAGCAGACTGTCATGGGCAATAGCAAATGCTGTATCATTTCTCCTAATTaGGCAGCAGGTATGTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: ISLKGNQKQTVMGNSKCCIISPN*AAGMSA Trigger: TGCGGACATACCTGCTGCCAAATTAGGAGAAATGAT...ACAGCATTTGCTATTGCCCATGACAGTCTGCTTCTGGTTACCTTTCAGAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR CAA 90 bp | TCTGTCAACTGCTACATCCTACATCGGCCTGATTTTCAAACTTCACCAGCACTAAAATGTCGCTCCAGGTaGGAAGACTTGAGAATATCT | + |
|
Preference number: 5 (lower is better) Translates to: SVNCYILHRPDFQTSPALKCRSR*EDLRIS Trigger: AGATATTCTCAAGTCTTCCAACCTGGAGCGACATTT...TAGTGCTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTAGCAGTTGACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR CAA 90 bp | TGCTATGCTAAATACCAGATATTTTGTTCCACTCAGAAGTGTTGGGTAAAGGAGCTGGACGACGTCTGGTaGAGTTCTTTAATCCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: CYAKYQIFCSTQKCWVKELDDVW*SSLIPS Trigger: ACTGGGGATTAAAGAACTCAACCAGACGTCGTCCAG...CTCCTTTACCCAACACTTCTGAGTGGAACAAAATATCTGGTATTTAGCATAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCTGTCAACTGCTACATCCTACATCGGCCTGATTTTCAAACTTCACCAGCATCCAGGTTGGAAGACTaGAGAATATCTATTGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSVNCYILHRPDFQTSPASRLED*RISIDG Trigger: ACCATCAATAGATATTCTCAAGTCTTCCAACCTGGA...TGCTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTAGCAGTTGACAGAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCATACCAACAAGTGCAGAAAATAAAGCATGATAGCAGAGGGTTCCAGGTATCCAGGTTGGAAGACTaGAGAATATCTATTGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: LPYQQVQKIKHDSRGFQVSRLED*RISIDG Trigger: ACCATCAATAGATATTCTCAAGTCTTCCAACCTGGA...TACCTGGAACCCTCTGCTATCATGCTTTATTTTCTGCACTTGTTGGTATGGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR CAA 90 bp | CTGGACAGTGTACATGTCATCAAGTATTGTCCAAAATGGAATTTGAAAGGGGTTTGTCTGCAACCACTTTaGCAACAGCGGTATGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LDSVHVIKYCPKWNLKGVCLQPL*QQRYVD Trigger: ATCCACATACCGCTGTTGCAAAAGTGGTTGCAGACA...AACCCCTTTCAAATTCCATTTTGGACAATACTTGATGACATGTACACTGTCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR CAA 90 bp | TCTCTAGCTGGACAGTGTACATGTCATCAAGTATTGTCCAAAATGGAATTTGAATGGGCAGCTTTTGTCTaGCATCTTGTCTGCAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: SLAGQCTCHQVLSKMEFEWAAFV*HLVCNH Trigger: GTGGTTGCAGACAAGATGCAAGACAAAAGCTGCCCA...TTCAAATTCCATTTTGGACAATACTTGATGACATGTACACTGTCCAGCTAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR CAA 90 bp | TTGAAAGGGGTTAAAAACGATGATTCTAATCCTAGTGAGCTTACTACTTCCTCTAGCACTGGGCAGCTTTaGTCTTGCATCTTGTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LKGVKNDDSNPSELTTSSSTGQL*SCILSA Trigger: TGCAGACAAGATGCAAGACAAAAGCTGCCCAGTGCT...AGAGGAAGTAGTAAGCTCACTAGGATTAGAATCATCGTTTTTAACCCCTTTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR CAA 90 bp | TTGAAAGGGGTTAAAAACGATGATTCTAATCCTAGTGAGCTTACTACTTCCTCTCTGGACGACGTCTGGTaGAGTTCTTTAATCCCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LKGVKNDDSNPSELTTSSLDDVW*SSLIPS Trigger: ACTGGGGATTAAAGAACTCAACCAGACGTCGTCCAG...AGAGGAAGTAGTAAGCTCACTAGGATTAGAATCATCGTTTTTAACCCCTTTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS TCA 90 bp | AAATCAAAATCTGACCTGACACCTATTGCCCAACCATTTTCTCTCTaGCTGCCAATTATCTCTGCTTTCTGGAAATCACTAACTCCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KSKSDLTPIAQPFSL*LPIISAFWKSLTPF Trigger: GAACGGAGTTAGTGATTTCCAGAAAGCAGAGATAATTGGCAGTCAGAGAGAAAATGGTTGGGCAATAGGTGTCAGGTCAGATTTTGATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR CAA 90 bp | TCTCTAGCTGGACAGTGTACATGTCATCAAGTATTGTCCAAAATGGAATTTGAATGTCTGCAACCACTTTaGCAACAGCGGTATGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLAGQCTCHQVLSKMEFECLQPL*QQRYVD Trigger: ATCCACATACCGCTGTTGCAAAAGTGGTTGCAGACA...TTCAAATTCCATTTTGGACAATACTTGATGACATGTACACTGTCCAGCTAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR CAA 90 bp | ACAGTTCTGTCAACTGCTACATCCTACATCGGCCTGATTTTCAAACTTCACCAGCCTTACAAACCAATTTaGGATGAGTTTTTCTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: TVLSTATSYIGLIFKLHQPYKPI*DEFFCM Trigger: CATGCAGAAAAACTCATCCAAAATTGGTTTGTAAGG...CTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTAGCAGTTGACAGAACTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
||
| CDS-3UTR CAA 90 bp | AACGATGATTCTAATCCTAGTGAGCTTACTACTTCCTCTATGTTAGCTAACTATCCCCAGGACTTAGTTTaGGAAACTCCTTCTCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: NDDSNPSELTTSSMLANYPQDLV*ETPSQE Trigger: TTCCTGAGAAGGAGTTTCCAAAACTAAGTCCTGGGG...ATAGTTAGCTAACATAGAGGAAGTAGTAAGCTCACTAGGATTAGAATCATCGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
||
| CDS-3UTR CAA 90 bp | CACAGCAATGGAAATGAAACACAGTTACCATTTTGTGTGGATTTAGGTACCCCATCCAGGTTGGAAGACTaGAGAATATCTATTGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: HSNGNETQLPFCVDLGTPSRLED*RISIDG Trigger: ACCATCAATAGATATTCTCAAGTCTTCCAACCTGGA...TGGGGTACCTAAATCCACACAAAATGGTAACTGTGTTTCATTTCCATTGCTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS-3UTR CAA 90 bp | TGCTATGCTAAATACCAGATATTTTGTTCCACTCAGAAGTGTTGGGTAAAGGAGAAATGTCGCTCCAGGTaGGAAGACTTGAGAATATCT | + |
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Preference number: 5 (lower is better) Translates to: CYAKYQIFCSTQKCWVKEKCRSR*EDLRIS Trigger: AGATATTCTCAAGTCTTCCAACCTGGAGCGACATTT...CTCCTTTACCCAACACTTCTGAGTGGAACAAAATATCTGGTATTTAGCATAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS-3UTR CAA 90 bp | ATTTCTCTGAAAGGTAACCAGAAGCAGACTGTCATGGGCAATAGCAAATGCTGTACTGATGGTATAAATTaGCCATTAACTGTCCGTCTT | + |
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Preference number: 5 (lower is better) Translates to: ISLKGNQKQTVMGNSKCCTDGIN*PLTVRL Trigger: AAGACGGACAGTTAATGGCAAATTTATACCATCAGT...ACAGCATTTGCTATTGCCCATGACAGTCTGCTTCTGGTTACCTTTCAGAGAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS-3UTR CAA 90 bp | TTGAAAGGGGTTAAAAACGATGATTCTAATCCTAGTGAGCTTACTACTTCCTCTAAATGTCGCTCCAGGTaGGAAGACTTGAGAATATCT | + |
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Preference number: 5 (lower is better) Translates to: LKGVKNDDSNPSELTTSSKCRSR*EDLRIS Trigger: AGATATTCTCAAGTCTTCCAACCTGGAGCGACATTT...AGAGGAAGTAGTAAGCTCACTAGGATTAGAATCATCGTTTTTAACCCCTTTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS-3UTR CAA 90 bp | TACATCCTACATCGGCCTGATTTTCAAACTTCACCAGCACTAACTACAGACATTCCTTACAAACCAATTTaGGATGAGTTTTTCTGCATG | + |
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Preference number: 5 (lower is better) Translates to: YILHRPDFQTSPALTTDIPYKPI*DEFFCM Trigger: CATGCAGAAAAACTCATCCAAAATTGGTTTGTAAGG...AATGTCTGTAGTTAGTGCTGGTGAAGTTTGAAAATCAGGCCGATGTAGGATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS-3UTR CAA 90 bp | CTGGACAGTGTACATGTCATCAAGTATTGTCCAAAATGGAATTTGAAAGGGGTTACTGATGGTATAAATTaGCCATTAACTGTCCGTCTT | + |
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Preference number: 5 (lower is better) Translates to: LDSVHVIKYCPKWNLKGVTDGIN*PLTVRL Trigger: AAGACGGACAGTTAATGGCAAATTTATACCATCAGT...AACCCCTTTCAAATTCCATTTTGGACAATACTTGATGACATGTACACTGTCCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS-3UTR CAA 90 bp | CTGGACAGTGTACATGTCATCAAGTATTGTCCAAAATGGAATTTGAAAGGGGTTCCTTACAAACCAATTTaGGATGAGTTTTTCTGCATG | + |
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Preference number: 5 (lower is better) Translates to: LDSVHVIKYCPKWNLKGVPYKPI*DEFFCM Trigger: CATGCAGAAAAACTCATCCAAAATTGGTTTGTAAGG...AACCCCTTTCAAATTCCATTTTGGACAATACTTGATGACATGTACACTGTCCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS-3UTR CAA 90 bp | TCTCTAGCTGGACAGTGTACATGTCATCAAGTATTGTCCAAAATGGAATTTGAAACTGATGGTATAAATTaGCCATTAACTGTCCGTCTT | + |
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Preference number: 5 (lower is better) Translates to: SLAGQCTCHQVLSKMEFETDGIN*PLTVRL Trigger: AAGACGGACAGTTAATGGCAAATTTATACCATCAGT...TTCAAATTCCATTTTGGACAATACTTGATGACATGTACACTGTCCAGCTAGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS TCA 90 bp | TCAACTACAGCTTCACTGAAGTATTTTGGTGGAAACTTCTTGTCATaGTCTTTAAGACAAACATGCCTTGTTGAAATGAATGTCTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: STTASLKYFGGNFLS*SLRQTCLVEMNVSE Trigger: TTCAGAGACATTCATTTCAACAAGGCATGTTTGTCTTAAAGATCATGACAAGAAGTTTCCACCAAAATACTTCAGTGAAGCTGTAGTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS GCA 72 bp | GCAGAGGCTCGTGGAAGCAGGAGCTGTGTGCGGCTCTaGACTTTAACCAGCAGGCTAGAAAGACACTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: AEARGSRSCVRL*TLTSRLERHSC Trigger: ACAGGAGTGTCTTTCTAGCCTGCTGGTTAAAGTGCAGAGCCGCACACAGCTCCTGCTTCCACGAGCCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS CAA 90 bp | AGCTGCGAGGCATTCTCCCTCAGAGCACCAGTCGGCAACAAACTCTaGCTGCAGCTTCTCGACCAGCATCTTCTCAATCCGGAAGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: SCEAFSLRAPVGNKL*LQLLDQHLLNPEVK Trigger: CTTCACTTCCGGATTGAGAAGATGCTGGTCGAGAAGCTGCAGCAAGAGTTTGTTGCCGACTGGTGCTCTGAGGGAGAATGCCTCGCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS GCA 72 bp | TCTCCCTCAGAGCACCAGTCGGCAACAAACTCTTGCTaGAGCTTCTCGACCAGCATCTTCTCAATCCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SPSEHQSATNSC*SFSTSIFSIRK Trigger: CTTCCGGATTGAGAAGATGCTGGTCGAGAAGCTGCAGCAAGAGTTTGTTGCCGACTGGTGCTCTGAGGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS GCA 72 bp | CATTCTCCCTCAGAGCACCAGTCGGCAACAAACTCTTaGTGCAGCTTCTCGACCAGCATCTTCTCAATCCGG | + |
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Preference number: 6 (lower is better) Translates to: HSPSEHQSATNS*CSFSTSIFSIR Trigger: CCGGATTGAGAAGATGCTGGTCGAGAAGCTGCAGCAAGAGTTTGTTGCCGACTGGTGCTCTGAGGGAGAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS CAA 72 bp | GCATTCTCCCTCAGAGCACCAGTCGGCAACAAACTCTaGCTGCAGCTTCTCGACCAGCATCTTCTCAATCCG | + |
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Preference number: 6 (lower is better) Translates to: AFSLRAPVGNKL*LQLLDQHLLNP Trigger: CGGATTGAGAAGATGCTGGTCGAGAAGCTGCAGCAAGAGTTTGTTGCCGACTGGTGCTCTGAGGGAGAATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS TCA 72 bp | AACCACATCAAGCACTTTGTCTGCAACCTCCTCAGCTaGAGCCCCACTCTCACAGAAGACTCGGGCATCGTA | + |
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Preference number: 6 (lower is better) Translates to: NHIKHFVCNLLS*SPTLTEDSGIV Trigger: TACGATGCCCGAGTCTTCTGTGAGAGTGGGGCTTCAGCTGAGGAGGTTGCAGACAAAGTGCTTGATGTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS CAA 90 bp | GGAGTAGTGAGCTGTGGATGCAATGAGCACTGGGCAGCTTTTGTCTaGCATCTTGTCTGCAACCACTTTTGCAACAGCGGTATGTGGATC | + |
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Preference number: 6 (lower is better) Translates to: GVVSCGCNEHWAAFV*HLVCNHFCNSGMWI Trigger: GATCCACATACCGCTGTTGCAAAAGTGGTTGCAGACAAGATGCAAGACAAAAGCTGCCCAGTGCTCATTGCATCCACAGCTCACTACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS GCA 72 bp | GCTGTGGATGCAATGAGCACTGGGCAGCTTTTGTCTTaGATCTTGTCTGCAACCACTTTTGCAACAGCGGTA | + |
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Preference number: 6 (lower is better) Translates to: AVDAMSTGQLLS*ILSATTFATAV Trigger: TACCGCTGTTGCAAAAGTGGTTGCAGACAAGATGCAAGACAAAAGCTGCCCAGTGCTCATTGCATCCACAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS CAA 72 bp | AGCTGTGGATGCAATGAGCACTGGGCAGCTTTTGTCTaGCATCTTGTCTGCAACCACTTTTGCAACAGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: SCGCNEHWAAFV*HLVCNHFCNSG Trigger: ACCGCTGTTGCAAAAGTGGTTGCAGACAAGATGCAAGACAAAAGCTGCCCAGTGCTCATTGCATCCACAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS TCA 72 bp | ATTTCTCCTAATTTGGCAGCAGGTATGTCCGCAGGGTaGATGCACCTTTCCAAGAGCACCTGTGCTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: ISPNLAAGMSAG*MHLSKSTCALS Trigger: AGAAAGAGCACAGGTGCTCTTGGAAAGGTGCATTCACCCTGCGGACATACCTGCTGCCAAATTAGGAGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS GCA 72 bp | TTTTCGAATAGGGATTCCCATCATCTTGGCATACACTaGCGCCAACACGTTCCCAAAGTTTCCTGTGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: FSNRDSHHLGIH*RQHVPKVSCGN Trigger: GTTCCCACAGGAAACTTTGGGAACGTGTTGGCGGCAGTGTATGCCAAGATGATGGGAATCCCTATTCGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS CCA 72 bp | CATACACTGCCGCCAACACGTTCCCAAAGTTTCCTGTaGGAACACAGACATCTACTGGGCTTCCAAAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: HTLPPTRSQSFL*EHRHLLGFQKK Trigger: TTTCTTTTGGAAGCCCAGTAGATGTCTGTGTTCCCACAGGAAACTTTGGGAACGTGTTGGCGGCAGTGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS CAA 72 bp | AACAGCCTAGTTTGTCACCTAATATTCTGCCAACTGTaGTTTTCCCAGAACCAGGCGGCCCCATCAGGACAA | + |
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Preference number: 6 (lower is better) Translates to: NSLVCHLIFCQL*FSQNQAAPSGQ Trigger: TTGTCCTGATGGGGCCGCCTGGTTCTGGGAAAACAACAGTTGGCAGAATATTAGGTGACAAACTAGGCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS GCA 72 bp | GTACAGTCTTACGTGCTTCAGCGAGTCTCTCAGAGATaGTCCAGTGTTCTGGCCAACAATCCTATCAATTCT | + |
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Preference number: 6 (lower is better) Translates to: VQSYVLQRVSQR*SSVLANNPINS Trigger: AGAATTGATAGGATTGTTGGCCAGAACACTGGAGCATCTCTGAGAGACTCGCTGAAGCACGTAAGACTGTAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS CAA 90 bp | GGTGAATGCACCTTTCCAAGAGCACCTGTGCTCTTTCTATGTAGGTaGCTCCTATTAGGTTATTCCACTCCCCAGGACTTAGTTTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: GECTFPRAPVLFLCR*LLLGYSTPQDLVLE Trigger: TTCCAAAACTAAGTCCTGGGGAGTGGAATAACCTAATAGGAGCAACCTACATAGAAAGAGCACAGGTGCTCTTGGAAAGGTGCATTCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS GCA 72 bp | CTGCACTTTAACCAGCAGGCTAGAAAGACACTCCTGTaGTATCTGTTTCAAATGGTGACATCTGGTCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: LHFNQQARKTLL*YLFQMVTSGQG Trigger: ACCTTGACCAGATGTCACCATTTGAAACAGATAGCACAGGAGTGTCTTTCTAGCCTGCTGGTTAAAGTGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054591.10 ENSMUST00000138914.8 |
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| CDS CAA 72 bp | ACCTTTCCAAGAGCACCTGTGCTCTTTCTATGTAGGTaGCTCCTATTAGGTTATTCCACTCCCCAGGACTTA | + |
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Preference number: 6 (lower is better) Translates to: TFPRAPVLFLCR*LLLGYSTPQDL Trigger: TAAGTCCTGGGGAGTGGAATAACCTAATAGGAGCAACCTACATAGAAAGAGCACAGGTGCTCTTGGAAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS CAA 72 bp | GGCAGCTTTTGTCTTGCATCTTGTCTGCAACCACTTTaGCAACAGCGGTATGTGGATCCAAAATATAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: GSFCLASCLQPL*QQRYVDPKYSL Trigger: CAGGCTATATTTTGGATCCACATACCGCTGTTGCAAAAGTGGTTGCAGACAAGATGCAAGACAAAAGCTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS CAA 90 bp | ATTCCATTTTTCTTCAGATGCCACATGCTAGCATCATGCATGGGATaGGACCCACTGAGGGAAATCACACTTCCAGATGCAGACAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: IPFFFRCHMLASCMG*DPLREITLPDADKF Trigger: AAACTTGTCTGCATCTGGAAGTGTGATTTCCCTCAGTGGGTCCAATCCCATGCATGATGCTAGCATGTGGCATCTGAAGAAAAATGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS GCA 72 bp | ATTCCATTTTTCTTCAGATGCCACATGCTAGCATCATaGATGGGATTGGACCCACTGAGGGAAATCACACTT | + |
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Preference number: 6 (lower is better) Translates to: IPFFFRCHMLAS*MGLDPLREITL Trigger: AAGTGTGATTTCCCTCAGTGGGTCCAATCCCATGCATGATGCTAGCATGTGGCATCTGAAGAAAAATGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS CCA 72 bp | TGCTTCAGCGAGTCTCTCAGAGATGCTCCAGTGTTCTaGCCAACAATCCTATCAATTCTCATTGATTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: CFSESLRDAPVF*PTILSILIDFR Trigger: TCTGAAATCAATGAGAATTGATAGGATTGTTGGCCAGAACACTGGAGCATCTCTGAGAGACTCGCTGAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS CCA 72 bp | TTTCCCCATAAGCAGTTTCAATCATTTCTCCTAATTTaGCAGCAGGTATGTCCGCAGGGTGAATGCACCTTT | + |
|
Preference number: 6 (lower is better) Translates to: FPHKQFQSFLLI*QQVCPQGECTF Trigger: AAAGGTGCATTCACCCTGCGGACATACCTGCTGCCAAATTAGGAGAAATGATTGAAACTGCTTATGGGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS CAA 72 bp | GCACAGATAAATTTTCGAATAGGGATTCCCATCATCTaGGCATACACTGCCGCCAACACGTTCCCAAAGTTT | + |
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Preference number: 6 (lower is better) Translates to: AQINFRIGIPII*AYTAANTFPKF Trigger: AAACTTTGGGAACGTGTTGGCGGCAGTGTATGCCAAGATGATGGGAATCCCTATTCGAAAATTTATCTGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS CAA 90 bp | TTCTCAAGGACATCACTATCTACATCGATGACACAACAGCCTAGTTaGTCACCTAATATTCTGCCAACTGTTGTTTTCCCAGAACCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: FSRTSLSTSMTQQPS*SPNILPTVVFPEPG Trigger: GCCTGGTTCTGGGAAAACAACAGTTGGCAGAATATTAGGTGACAAACTAGGCTGTTGTGTCATCGATGTAGATAGTGATGTCCTTGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS TCA 72 bp | TCCAGGCTTTCTCAAGGACATCACTATCTACATCGATaGCACAACAGCCTAGTTTGTCACCTAATATTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SRLSQGHHYLHR*HNSLVCHLIFC Trigger: GCAGAATATTAGGTGACAAACTAGGCTGTTGTGTCATCGATGTAGATAGTGATGTCCTTGAGAAAGCCTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS GCA 72 bp | CAGTGTCTCCTGAAGTGGCTACAAGTATCACATAATTaGAACCTGGTGGGATACAGTAGGCAAAAATATGAG | + |
|
Preference number: 6 (lower is better) Translates to: QCLLKWLQVSHN*NLVGYSRQKYE Trigger: CTCATATTTTTGCCTACTGTATCCCACCAGGTTGCAATTATGTGATACTTGTAGCCACTTCAGGAGACACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS CAA 90 bp | TGTGGGAACACAGACATCTACTGGGCTTCCAAAAGAAATAAACCGTaGGTTAACAAGCTCAAGGTATGCAGAGGCATGATAAACTATCTG | + |
|
Preference number: 6 (lower is better) Translates to: CGNTDIYWASKRNKP*VNKLKVCRGMINYL Trigger: CAGATAGTTTATCATGCCTCTGCATACCTTGAGCTTGTTAACCAACGGTTTATTTCTTTTGGAAGCCCAGTAGATGTCTGTGTTCCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS GCA 72 bp | AAATCGCTCATTACCAACATCCTGCAATTTTTCAGATaGGCTCATATTCCAGGCTTTCTCAAGGACATCACT | + |
|
Preference number: 6 (lower is better) Translates to: KSLITNILQFFR*AHIPGFLKDIT Trigger: AGTGATGTCCTTGAGAAAGCCTGGAATATGAGCGCATCTGAAAAATTGCAGGATGTTGGTAATGAGCGATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS GCA 72 bp | CCTTCCTCTTCTAAAAATCGCTCATTACCAACATCCTaGAATTTTTCAGATGCGCTCATATTCCAGGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PSSSKNRSLPTS*NFSDALIFQAF Trigger: GAAAGCCTGGAATATGAGCGCATCTGAAAAATTGCAGGATGTTGGTAATGAGCGATTTTTAGAAGAGGAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS CAA 72 bp | ACAGACATCTACTGGGCTTCCAAAAGAAATAAACCGTaGGTTAACAAGCTCAAGGTATGCAGAGGCATGATA | + |
|
Preference number: 6 (lower is better) Translates to: TDIYWASKRNKP*VNKLKVCRGMI Trigger: TATCATGCCTCTGCATACCTTGAGCTTGTTAACCAACGGTTTATTTCTTTTGGAAGCCCAGTAGATGTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS CAA 90 bp | AACTGTCCGTCTTTGTTAGCCATCAAGTATAAATGTCGCTCCAGGTaGGAAGACTTGAGAATATCTATTGATGGTGAAAAGGTTTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: NCPSLLAIKYKCRSR*EDLRISIDGEKVCA Trigger: AGCACAAACCTTTTCACCATCAATAGATATTCTCAAGTCTTCCAACCTGGAGCGACATTTATACTTGATGGCTAACAAAGACGGACAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 ENSMUST00000138965.8 |
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| CDS TCA 72 bp | TTCCTTACAAACCAATTTTGGATGAGTTTTTCTGCATaGCTCTTCAGGACATCCACATCAGCTACACAAACC | + |
|
Preference number: 6 (lower is better) Translates to: FLTNQFWMSFSA*LFRTSTSATQT Trigger: GGTTTGTGTAGCTGATGTGGATGTCCTGAAGAGTCATGCAGAAAAACTCATCCAAAATTGGTTTGTAAGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 |
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| CDS CAA 72 bp | ACATCACTATCTACATCGATGACACAACAGCCTAGTTaGTCACCTAATATTCTGCCAACTGTTGTTTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TSLSTSMTQQPS*SPNILPTVVFP Trigger: TGGGAAAACAACAGTTGGCAGAATATTAGGTGACAAACTAGGCTGTTGTGTCATCGATGTAGATAGTGATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054591.10 |
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| CDS CAA 72 bp | GCCATCAAGTATAAATGTCGCTCCAGGTTGGAAGACTaGAGAATATCTATTGATGGTGAAAAGGTTTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: AIKYKCRSRLED*RISIDGEKVCA Trigger: AGCACAAACCTTTTCACCATCAATAGATATTCTCAAGTCTTCCAACCTGGAGCGACATTTATACTTGATGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 ENSMUST00000138965.8 |
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| CDS CAA 72 bp | TCTTTGTTAGCCATCAAGTATAAATGTCGCTCCAGGTaGGAAGACTTGAGAATATCTATTGATGGTGAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SLLAIKYKCRSR*EDLRISIDGEK Trigger: CTTTTCACCATCAATAGATATTCTCAAGTCTTCCAACCTGGAGCGACATTTATACTTGATGGCTAACAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 ENSMUST00000138965.8 |
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| CDS CAA 90 bp | TCTTTGTTAGCCATCAAGTATAAATGTCGCTCCAGGTTGGAAGACTaGAGAATATCTATTGATGGTGAAAAGGTTTGTGCTAATTTCCTA | + |
|
Preference number: 6 (lower is better) Translates to: SLLAIKYKCRSRLED*RISIDGEKVCANFL Trigger: TAGGAAATTAGCACAAACCTTTTCACCATCAATAGATATTCTCAAGTCTTCCAACCTGGAGCGACATTTATACTTGATGGCTAACAAAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054591.10 ENSMUST00000102951.2 ENSMUST00000102952.8 ENSMUST00000138965.8 |
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