Pregenerated sensors for THG1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000011254Ensembl transcript IDs: ENSMUST00000011398.13, ENSMUST00000109254.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGGATCCCCAAACCATTCCTCCTGTGTTCAGTTCAGGCAAAGCTaGCACCCTGGGAACTGGCACAGAGTCTTGAGTGTTCCCTGGGAT | + |
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Preference number: 1 (lower is better) Translates to: AGSPNHSSCVQFRQS*HPGNWHRVLSVPWD Trigger: ATCCCAGGGAACACTCAAGACTCTGTGCCAGTTCCCAGGGTGGCAGCTTTGCCTGAACTGAACACAGGAGGAATGGTTTGGGGATCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR TCA 90 bp | TTCAGTTCAGGCAAAGCTGCCACCCTGGGAACTGGCACAGAGTCTTaGGTGTTCCCTGGGATTTCTCAATCTGGAGGCATTGTGCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: FSSGKAATLGTGTES*VFPGISQSGGIVQA Trigger: TGCCTGCACAATGCCTCCAGATTGAGAAATCCCAGGGAACACTCAAGACTCTGTGCCAGTTCCCAGGGTGGCAGCTTTGCCTGAACTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR CCA 90 bp | CATTCCTCCTGTGTTCAGTTCAGGCAAAGCTGCCACCCTGGGAACTaGCACAGAGTCTTGAGTGTTCCCTGGGATTTCTCAATCTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: HSSCVQFRQSCHPGN*HRVLSVPWDFSIWR Trigger: CCTCCAGATTGAGAAATCCCAGGGAACACTCAAGACTCTGTGCCAGTTCCCAGGGTGGCAGCTTTGCCTGAACTGAACACAGGAGGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR CCA 90 bp | CCCAAACCATTCCTCCTGTGTTCAGTTCAGGCAAAGCTGCCACCCTaGGAACTGGCACAGAGTCTTGAGTGTTCCCTGGGATTTCTCAAT | + |
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Preference number: 1 (lower is better) Translates to: PKPFLLCSVQAKLPP*ELAQSLECSLGFLN Trigger: ATTGAGAAATCCCAGGGAACACTCAAGACTCTGTGCCAGTTCCCAGGGTGGCAGCTTTGCCTGAACTGAACACAGGAGGAATGGTTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR TCA 90 bp | ACCTCTGCAATCACCAGTGACCCCAAGCCCGACTCGACTCCTTTTTaGGAGCCTTGCCATGTCATGCAGTTTGGCTTCAAATATTTGGCT | + |
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Preference number: 1 (lower is better) Translates to: TSAITSDPKPDSTPF*EPCHVMQFGFKYLA Trigger: AGCCAAATATTTGAAGCCAAACTGCATGACATGGCAAGGCTCTCAAAAAGGAGTCGAGTCGGGCTTGGGGTCACTGGTGATTGCAGAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR CCA 90 bp | GGGAACTGGCACAGAGTCTTGAGTGTTCCCTGGGATTTCTCAATCTaGAGGCATTGTGCAGGCAGCAACCCATATTTAACTGCATGCCAA | + |
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Preference number: 1 (lower is better) Translates to: GNWHRVLSVPWDFSI*RHCAGSNPYLTACQ Trigger: TTGGCATGCAGTTAAATATGGGTTGCTGCCTGCACAATGCCTCCAGATTGAGAAATCCCAGGGAACACTCAAGACTCTGTGCCAGTTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR GCA 90 bp | TTTCTCAATCTGGAGGCATTGTGCAGGCAGCAACCCATATTTAACTaGATGCCAAAAGATAACTGCAAGCAGTTGGGTGTGAGAAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: FLNLEALCRQQPIFN*MPKDNCKQLGVRSG Trigger: CCCACTTCTCACACCCAACTGCTTGCAGTTATCTTTTGGCATGCAGTTAAATATGGGTTGCTGCCTGCACAATGCCTCCAGATTGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR GCA 90 bp | CAGAGTCTTGAGTGTTCCCTGGGATTTCTCAATCTGGAGGCATTGTaGAGGCAGCAACCCATATTTAACTGCATGCCAAAAGATAACTGC | + |
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Preference number: 1 (lower is better) Translates to: QSLECSLGFLNLEAL*RQQPIFNCMPKDNC Trigger: GCAGTTATCTTTTGGCATGCAGTTAAATATGGGTTGCTGCCTGCACAATGCCTCCAGATTGAGAAATCCCAGGGAACACTCAAGACTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR GCA 90 bp | TCAATGATTATGGTAACAATTCCAGAAAAATCAATCCTGGAATGGTaGAGGATCCCCAAACCATTCCTCCTGTGTTCAGTTCAGGCAAAG | + |
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Preference number: 1 (lower is better) Translates to: SMIMVTIPEKSILEW*RIPKPFLLCSVQAK Trigger: CTTTGCCTGAACTGAACACAGGAGGAATGGTTTGGGGATCCTGCACCATTCCAGGATTGATTTTTCTGGAATTGTTACCATAATCATTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR CCA 90 bp | ATGTCAATGATTATGGTAACAATTCCAGAAAAATCAATCCTGGAATaGTGCAGGATCCCCAAACCATTCCTCCTGTGTTCAGTTCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: MSMIMVTIPEKSILE*CRIPKPFLLCSVQA Trigger: TGCCTGAACTGAACACAGGAGGAATGGTTTGGGGATCCTGCACCATTCCAGGATTGATTTTTCTGGAATTGTTACCATAATCATTGACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR CAA 90 bp | GTTCAGTTCAGGCAAAGCTGCCACCCTGGGAACTGGCACAGAGTCTaGAGTGTTCCCTGGGATTTCTCAATCTGGAGGCATTGTGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: VQFRQSCHPGNWHRV*SVPWDFSIWRHCAG Trigger: GCCTGCACAATGCCTCCAGATTGAGAAATCCCAGGGAACACTCAAGACTCTGTGCCAGTTCCCAGGGTGGCAGCTTTGCCTGAACTGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR-3UTR TCA 90 bp | CCAAGCCCGACTCGACTCCTTTTTGAGAGCCTTGCCATGTCATGCAGTTTGGCTTCGGGGAGCCTTGTGTaGTTAAGCATGCTAGAACTG | + |
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Preference number: 2 (lower is better) Translates to: PSPTRLLFESLAMSCSLASGSLV*LSMLEL Trigger: CAGTTCTAGCATGCTTAATCACACAAGGCTCCCCGA...AGCCAAACTGCATGACATGGCAAGGCTCTCAAAAAGGAGTCGAGTCGGGCTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAAACACCGGCATCGGCAGATGGAGTGTCAATTAGTGAGGGATGAGGCCAGATGCCACCCTGGGAACTaGCACAGAGTCTTGAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: EKHRHRQMECQLVRDEARCHPGN*HRVLSV Trigger: AACACTCAAGACTCTGTGCCAGTTCCCAGGGTGGCA...TCTGGCCTCATCCCTCACTAATTGACACTCCATCTGCCGATGCCGGTGTTTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAAACACCGGCATCGGCAGATGGAGTGTCAATTAGTGAGGGATGAGGCCAGAACTGGCACAGAGTCTTaGGTGTTCCCTGGGATTTCT | + |
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Preference number: 2 (lower is better) Translates to: EKHRHRQMECQLVRDEARTGTES*VFPGIS Trigger: AGAAATCCCAGGGAACACTCAAGACTCTGTGCCAGT...TCTGGCCTCATCCCTCACTAATTGACACTCCATCTGCCGATGCCGGTGTTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR-3UTR CCA 90 bp | GAATGGGAAGGAAAAACACCGGCATCGGCAGATGGAGTGTCAATTAGTGAGGGATGCCACCCTGGGAACTaGCACAGAGTCTTGAGTGTT | + |
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Preference number: 2 (lower is better) Translates to: EWEGKTPASADGVSISEGCHPGN*HRVLSV Trigger: AACACTCAAGACTCTGTGCCAGTTCCCAGGGTGGCA...TCCCTCACTAATTGACACTCCATCTGCCGATGCCGGTGTTTTTCCTTCCCATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR-3UTR CCA 90 bp | GAATGGGAAGGAAAAACACCGGCATCGGCAGATGGAGTGTCAATTAGTGAGGGATGGGATTTCTCAATCTaGAGGCATTGTGCAGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: EWEGKTPASADGVSISEGWDFSI*RHCAGS Trigger: GCTGCCTGCACAATGCCTCCAGATTGAGAAATCCCA...TCCCTCACTAATTGACACTCCATCTGCCGATGCCGGTGTTTTTCCTTCCCATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAGCCCGACTCGACTCCTTTTTGAGAGCCTTGCCATGTCATGCAGTTTGGCTAAATCAATCCTGGAATaGTGCAGGATCCCCAAACCA | + |
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Preference number: 2 (lower is better) Translates to: PSPTRLLFESLAMSCSLAKSILE*CRIPKP Trigger: TGGTTTGGGGATCCTGCACCATTCCAGGATTGATTT...AGCCAAACTGCATGACATGGCAAGGCTCTCAAAAAGGAGTCGAGTCGGGCTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR-3UTR GCA 90 bp | GAATGGGAAGGAAAAACACCGGCATCGGCAGATGGAGTGTCAATTAGTGAGGGAAATCTGGAGGCATTGTaGAGGCAGCAACCCATATTT | + |
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Preference number: 2 (lower is better) Translates to: EWEGKTPASADGVSISEGNLEAL*RQQPIF Trigger: AAATATGGGTTGCTGCCTGCACAATGCCTCCAGATT...TCCCTCACTAATTGACACTCCATCTGCCGATGCCGGTGTTTTTCCTTCCCATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCAAATATTTGGCTTCTCCATCCTCATTCACATTCGCATTCACACACACACACAGTTCAGGCAAAGCTaGCACCCTGGGAACTGGCAC | + |
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Preference number: 2 (lower is better) Translates to: LQIFGFSILIHIRIHTHTQFRQS*HPGNWH Trigger: GTGCCAGTTCCCAGGGTGGCAGCTTTGCCTGAACTG...TGTGTGTGTGTGAATGCGAATGTGAATGAGGATGGAGAAGCCAAATATTTGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR CAA 90 bp | GCACAGAGTCTTGAGTGTTCCCTGGGATTTCTCAATCTGGAGGCATaGTGCAGGCAGCAACCCATATTTAACTGCATGCCAAAAGATAAC | + |
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Preference number: 2 (lower is better) Translates to: AQSLECSLGFLNLEA*CRQQPIFNCMPKDN Trigger: GTTATCTTTTGGCATGCAGTTAAATATGGGTTGCTGCCTGCACAATGCCTCCAGATTGAGAAATCCCAGGGAACACTCAAGACTCTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR CAA 90 bp | AGCCCGACTCGACTCCTTTTTGAGAGCCTTGCCATGTCATGCAGTTaGGCTTCAAATATTTGGCTTCTCCATCCTCATTCACATTCGCAT | + |
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Preference number: 2 (lower is better) Translates to: SPTRLLFESLAMSCS*ASNIWLLHPHSHSH Trigger: ATGCGAATGTGAATGAGGATGGAGAAGCCAAATATTTGAAGCCAAACTGCATGACATGGCAAGGCTCTCAAAAAGGAGTCGAGTCGGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTGCTTAAGCAGAACAAGATACACCACCCCCATATATCCCTCCTTCATCTGTTCGGGGAGCCTTGTGTaGTTAAGCATGCTAGAACTG | + |
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Preference number: 2 (lower is better) Translates to: FCLSRTRYTTPIYPSFICSGSLV*LSMLEL Trigger: CAGTTCTAGCATGCTTAATCACACAAGGCTCCCCGA...ACAGATGAAGGAGGGATATATGGGGGTGGTGTATCTTGTTCTGCTTAAGCAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR-3UTR GCA 90 bp | CCAAGCCCGACTCGACTCCTTTTTGAGAGCCTTGCCATGTCATGCAGTTTGGCTCAACCCATATTTAACTaGATGCCAAAAGATAACTGC | + |
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Preference number: 2 (lower is better) Translates to: PSPTRLLFESLAMSCSLAQPIFN*MPKDNC Trigger: GCAGTTATCTTTTGGCATGCAGTTAAATATGGGTTG...AGCCAAACTGCATGACATGGCAAGGCTCTCAAAAAGGAGTCGAGTCGGGCTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR-3UTR CCA 90 bp | GAATGGGAAGGAAAAACACCGGCATCGGCAGATGGAGTGTCAATTAGTGAGGGACACACACTTCCCTCTTaGATGTACACACATATACCT | + |
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Preference number: 2 (lower is better) Translates to: EWEGKTPASADGVSISEGHTLPS*MYTHIP Trigger: AGGTATATGTGTGTACATCCAAGAGGGAAGTGTGTG...TCCCTCACTAATTGACACTCCATCTGCCGATGCCGGTGTTTTTCCTTCCCATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAGCCTTGCCATGTCATGCAGTTTGGCTTCAAATATTTGGCTTCTCCATCCTCAGAAAAATCAATCCTaGAATGGTGCAGGATCCCCA | + |
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Preference number: 2 (lower is better) Translates to: ESLAMSCSLASNIWLLHPQKNQS*NGAGSP Trigger: TGGGGATCCTGCACCATTCCAGGATTGATTTTTCTG...AGGATGGAGAAGCCAAATATTTGAAGCCAAACTGCATGACATGGCAAGGCTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR-3UTR GCA 90 bp | TCAAGGGAAATCATGATTTCCCCACTGAGTTCAACACCTTGGGAACAAATGCCTAATCTGGAGGCATTGTaGAGGCAGCAACCCATATTT | + |
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Preference number: 2 (lower is better) Translates to: SREIMISPLSSTPWEQMPNLEAL*RQQPIF Trigger: AAATATGGGTTGCTGCCTGCACAATGCCTCCAGATT...AGGCATTTGTTCCCAAGGTGTTGAACTCAGTGGGGAAATCATGATTTCCCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR-3UTR GCA 90 bp | CTCGACTCCTTTTTGAGAGCCTTGCCATGTCATGCAGTTTGGCTTCAAATATTTTCAATCCTGGAATGGTaGAGGATCCCCAAACCATTC | + |
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Preference number: 2 (lower is better) Translates to: LDSFLRALPCHAVWLQIFSILEW*RIPKPF Trigger: GAATGGTTTGGGGATCCTGCACCATTCCAGGATTGA...AAATATTTGAAGCCAAACTGCATGACATGGCAAGGCTCTCAAAAAGGAGTCGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR-3UTR CCA 90 bp | CTCGACTCCTTTTTGAGAGCCTTGCCATGTCATGCAGTTTGGCTTCAAATATTTGGTGAGGGTAAAGTTTaGGCTCCTCTTTATCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: LDSFLRALPCHAVWLQIFGEGKV*APLYQR Trigger: CCTCTGATAAAGAGGAGCCCAAACTTTACCCTCACC...AAATATTTGAAGCCAAACTGCATGACATGGCAAGGCTCTCAAAAAGGAGTCGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGGGAAATCATGATTTCCCCACTGAGTTCAACACCTTGGGAACAAATGCCTCAGAAAAATCAATCCTaGAATGGTGCAGGATCCCCA | + |
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Preference number: 2 (lower is better) Translates to: SREIMISPLSSTPWEQMPQKNQS*NGAGSP Trigger: TGGGGATCCTGCACCATTCCAGGATTGATTTTTCTG...AGGCATTTGTTCCCAAGGTGTTGAACTCAGTGGGGAAATCATGATTTCCCTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTGGCTTCAAATATTTGGCTTCTCCATCCTCATTCACATTCGCATTCACACAGGTGAGGGTAAAGTTTaGGCTCCTCTTTATCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: VWLQIFGFSILIHIRIHTGEGKV*APLYQR Trigger: CCTCTGATAAAGAGGAGCCCAAACTTTACCCTCACC...TGTGTGAATGCGAATGTGAATGAGGATGGAGAAGCCAAATATTTGAAGCCAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR-3UTR GCA 90 bp | CTCGACTCCTTTTTGAGAGCCTTGCCATGTCATGCAGTTTGGCTTCAAATATTTCCATATTTAACTGCATaGCAAAAGATAACTGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: LDSFLRALPCHAVWLQIFPYLTA*QKITAS Trigger: GCTTGCAGTTATCTTTTGGCATGCAGTTAAATATGG...AAATATTTGAAGCCAAACTGCATGACATGGCAAGGCTCTCAAAAAGGAGTCGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR-3UTR GCA 90 bp | CTCGACTCCTTTTTGAGAGCCTTGCCATGTCATGCAGTTTGGCTTCAAATATTTCAACCCATATTTAACTaGATGCCAAAAGATAACTGC | + |
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Preference number: 2 (lower is better) Translates to: LDSFLRALPCHAVWLQIFQPIFN*MPKDNC Trigger: GCAGTTATCTTTTGGCATGCAGTTAAATATGGGTTG...AAATATTTGAAGCCAAACTGCATGACATGGCAAGGCTCTCAAAAAGGAGTCGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR-3UTR CCA 90 bp | ATGATTATGGTAACAATTCCAGAAAAATCAATCCTGGAATGGTGCAGGATCCCCCCTCTTTATCAGAGGTaGAAAGAGGTGACAGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: MIMVTIPEKSILEWCRIPPLYQR*KEVTVF Trigger: AAAAACTGTCACCTCTTTCCACCTCTGATAAAGAGG...GGGGATCCTGCACCATTCCAGGATTGATTTTTCTGGAATTGTTACCATAATCAT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTGGCTTCAAATATTTGGCTTCTCCATCCTCATTCACATTCGCATTCACACACCTCTTTATCAGAGGTaGAAAGAGGTGACAGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: VWLQIFGFSILIHIRIHTPLYQR*KEVTVF Trigger: AAAAACTGTCACCTCTTTCCACCTCTGATAAAGAGG...TGTGTGAATGCGAATGTGAATGAGGATGGAGAAGCCAAATATTTGAAGCCAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR GCA 72 bp | CACCTTGGGAACAAATGCCTTCCCATCCCCACTCTCTaGCCCTTGCCAGTTCCCATCCTGCCATTGGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: HLGNKCLPIPTL*PLPVPILPLVG Trigger: TCCCACCAATGGCAGGATGGGAACTGGCAAGGGGCAGAGAGTGGGGATGGGAAGGCATTTGTTCCCAAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR CCA 72 bp | CACCCTGGGAACTGGCACAGAGTCTTGAGTGTTCCCTaGGATTTCTCAATCTGGAGGCATTGTGCAGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: HPGNWHRVLSVP*DFSIWRHCAGS Trigger: GCTGCCTGCACAATGCCTCCAGATTGAGAAATCCCAGGGAACACTCAAGACTCTGTGCCAGTTCCCAGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR GCA 72 bp | CCAAACCATTCCTCCTGTGTTCAGTTCAGGCAAAGCTaGCACCCTGGGAACTGGCACAGAGTCTTGAGTGTT | + |
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Preference number: 3 (lower is better) Translates to: PNHSSCVQFRQS*HPGNWHRVLSV Trigger: AACACTCAAGACTCTGTGCCAGTTCCCAGGGTGGCAGCTTTGCCTGAACTGAACACAGGAGGAATGGTTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR CCA 72 bp | ACCCATCTCCAGTCATGTCCTTCCTTACAGTGTTCTTaGGACCAGGAGTGCTTGAACCACCTAGGGTTAGGG | + |
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Preference number: 3 (lower is better) Translates to: THLQSCPSLQCS*DQECLNHLGLG Trigger: CCCTAACCCTAGGTGGTTCAAGCACTCCTGGTCCCAAGAACACTGTAAGGAAGGACATGACTGGAGATGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR CCA 72 bp | TGTGTTCAGTTCAGGCAAAGCTGCCACCCTGGGAACTaGCACAGAGTCTTGAGTGTTCCCTGGGATTTCTCA | + |
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Preference number: 3 (lower is better) Translates to: CVQFRQSCHPGN*HRVLSVPWDFS Trigger: TGAGAAATCCCAGGGAACACTCAAGACTCTGTGCCAGTTCCCAGGGTGGCAGCTTTGCCTGAACTGAACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR CCA 72 bp | CCACTCTCTGCCCCTTGCCAGTTCCCATCCTGCCATTaGTGGGAGGAGCTATTTAAAAACCTCTGCAATCAC | + |
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Preference number: 3 (lower is better) Translates to: PLSAPCQFPSCH*WEELFKNLCNH Trigger: GTGATTGCAGAGGTTTTTAAATAGCTCCTCCCACCAATGGCAGGATGGGAACTGGCAAGGGGCAGAGAGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR TCA 72 bp | ATCACCAGTGACCCCAAGCCCGACTCGACTCCTTTTTaGGAGCCTTGCCATGTCATGCAGTTTGGCTTCAAA | + |
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Preference number: 3 (lower is better) Translates to: ITSDPKPDSTPF*EPCHVMQFGFK Trigger: TTTGAAGCCAAACTGCATGACATGGCAAGGCTCTCAAAAAGGAGTCGAGTCGGGCTTGGGGTCACTGGTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR CCA 72 bp | AGGGAAATCATGATTTCCCCACTGAGTTCAACACCTTaGGAACAAATGCCTTCCCATCCCCACTCTCTGCCC | + |
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Preference number: 3 (lower is better) Translates to: REIMISPLSSTP*EQMPSHPHSLP Trigger: GGGCAGAGAGTGGGGATGGGAAGGCATTTGTTCCCAAGGTGTTGAACTCAGTGGGGAAATCATGATTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR-3UTR CAA 90 bp | GAAAAACACCGGCATCGGCAGATGGAGTGTCAATTAGTGAGGGATGAGGCCAGATTCCTTACAGTGTTCTaGGGACCAGGAGTGCTTGAA | + |
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Preference number: 3 (lower is better) Translates to: EKHRHRQMECQLVRDEARFLTVF*GPGVLE Trigger: TTCAAGCACTCCTGGTCCCAAGAACACTGTAAGGAA...TCTGGCCTCATCCCTCACTAATTGACACTCCATCTGCCGATGCCGGTGTTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR TCA 72 bp | CCGGCATCGGCAGATGGAGTGTCAATTAGTGAGGGATaGGGCCAGACGCTGCTCTTTCAAAAATACATTTTC | + |
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Preference number: 3 (lower is better) Translates to: PASADGVSISEG*GQTLLFQKYIF Trigger: GAAAATGTATTTTTGAAAGAGCAGCGTCTGGCCTCATCCCTCACTAATTGACACTCCATCTGCCGATGCCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| 3UTR GCA 72 bp | GAGTGTTCCCTGGGATTTCTCAATCTGGAGGCATTGTaGAGGCAGCAACCCATATTTAACTGCATGCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ECSLGFLNLEAL*RQQPIFNCMPK Trigger: TTTTGGCATGCAGTTAAATATGGGTTGCTGCCTGCACAATGCCTCCAGATTGAGAAATCCCAGGGAACACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| 3UTR GCA 72 bp | CCGACTCGACTCCTTTTTGAGAGCCTTGCCATGTCATaGAGTTTGGCTTCAAATATTTGGCTTCTCCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: PTRLLFESLAMS*SLASNIWLLHP Trigger: AGGATGGAGAAGCCAAATATTTGAAGCCAAACTGCATGACATGGCAAGGCTCTCAAAAAGGAGTCGAGTCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| 3UTR CCA 72 bp | CACAGAGTCTTGAGTGTTCCCTGGGATTTCTCAATCTaGAGGCATTGTGCAGGCAGCAACCCATATTTAACT | + |
|
Preference number: 3 (lower is better) Translates to: HRVLSVPWDFSI*RHCAGSNPYLT Trigger: AGTTAAATATGGGTTGCTGCCTGCACAATGCCTCCAGATTGAGAAATCCCAGGGAACACTCAAGACTCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGCATTGTGCAGGCAGCAACCCATATTTAACTGCATGCCAAAAGATAACTGCATTCCTTACAGTGTTCTaGGGACCAGGAGTGCTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: RHCAGSNPYLTACQKITAFLTVF*GPGVLE Trigger: TTCAAGCACTCCTGGTCCCAAGAACACTGTAAGGAA...TGCAGTTATCTTTTGGCATGCAGTTAAATATGGGTTGCTGCCTGCACAATGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCGCATTCACACACACACACACACACACACACTTCCCTCTTGGATGTACACACAATAGGACCATGATTTaGAAAAGAGCCAAAGAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: FAFTHTHTHTHFPLGCTHNRTMI*KRAKEV Trigger: GACTTCTTTGGCTCTTTTCAAAATCATGGTCCTATT...GTGTGTACATCCAAGAGGGAAGTGTGTGTGTGTGTGTGTGTGTGTGAATGCGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| 3UTR-3UTR CAA 90 bp | ACACACTTCCCTCTTGGATGTACACACATATACCTTCCTAAAATACCTTTTCTTCTCAATCTGGAGGCATaGTGCAGGCAGCAACCCATA | + |
|
Preference number: 3 (lower is better) Translates to: THFPLGCTHIYLPKIPFLLNLEA*CRQQPI Trigger: TATGGGTTGCTGCCTGCACAATGCCTCCAGATTGAG...AAGAAAAGGTATTTTAGGAAGGTATATGTGTGTACATCCAAGAGGGAAGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| 3UTR GCA 72 bp | ATGGTAACAATTCCAGAAAAATCAATCCTGGAATGGTaGAGGATCCCCAAACCATTCCTCCTGTGTTCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: MVTIPEKSILEW*RIPKPFLLCSV Trigger: AACTGAACACAGGAGGAATGGTTTGGGGATCCTGCACCATTCCAGGATTGATTTTTCTGGAATTGTTACCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| 3UTR-3UTR CAA 90 bp | CTAAGATATGAAACAGGGTCAAGGGAAATCATGATTTCCCCACTGAGTTCAACATTTGGCTTCAAATATTaGGCTTCTCCATCCTCATTC | + |
|
Preference number: 3 (lower is better) Translates to: LRYETGSREIMISPLSSTFGFKY*ASPSSF Trigger: GAATGAGGATGGAGAAGCCAAATATTTGAAGCCAAA...TGTTGAACTCAGTGGGGAAATCATGATTTCCCTTGACCCTGTTTCATATCTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTGGCTTCAAATATTTGGCTTCTCCATCCTCATTCACATTCGCATTCACACAAATAGGACCATGATTTaGAAAAGAGCCAAAGAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: VWLQIFGFSILIHIRIHTNRTMI*KRAKEV Trigger: GACTTCTTTGGCTCTTTTCAAAATCATGGTCCTATT...TGTGTGAATGCGAATGTGAATGAGGATGGAGAAGCCAAATATTTGAAGCCAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| 3UTR CAA 72 bp | GGGAACAAATGCCTTCCCATCCCCACTCTCTGCCCCTaGCCAGTTCCCATCCTGCCATTGGTGGGAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GNKCLPIPTLCP*PVPILPLVGGA Trigger: AGCTCCTCCCACCAATGGCAGGATGGGAACTGGCAAGGGGCAGAGAGTGGGGATGGGAAGGCATTTGTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| 3UTR CAA 72 bp | TGTCCTTCCTTACAGTGTTCTTGGGACCAGGAGTGCTaGAACCACCTAGGGTTAGGGGGAGACTCGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CPSLQCSWDQEC*NHLGLGGDSGS Trigger: GCTCCCCGAGTCTCCCCCTAACCCTAGGTGGTTCAAGCACTCCTGGTCCCAAGAACACTGTAAGGAAGGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| 3UTR CAA 72 bp | AGGCAAAGCTGCCACCCTGGGAACTGGCACAGAGTCTaGAGTGTTCCCTGGGATTTCTCAATCTGGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RQSCHPGNWHRV*SVPWDFSIWRH Trigger: ATGCCTCCAGATTGAGAAATCCCAGGGAACACTCAAGACTCTGTGCCAGTTCCCAGGGTGGCAGCTTTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| 3UTR CAA 72 bp | CACCCATCTCCAGTCATGTCCTTCCTTACAGTGTTCTaGGGACCAGGAGTGCTTGAACCACCTAGGGTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: HPSPVMSFLTVF*GPGVLEPPRVR Trigger: CCTAACCCTAGGTGGTTCAAGCACTCCTGGTCCCAAGAACACTGTAAGGAAGGACATGACTGGAGATGGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS-3UTR CCA 90 bp | CTGGAGGCATTGTGCAGGCAGCAACCCATATTTAACTGCATGCCAAAAGATAACTCCTCAGCAAACCGGTaGAAATTCCGGCCGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LEALCRQQPIFNCMPKDNSSANR*KFRPSS Trigger: GCTGGACGGCCGGAATTTCCACCGGTTTGCTGAGGA...GTTATCTTTTGGCATGCAGTTAAATATGGGTTGCTGCCTGCACAATGCCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011398.13 |
||
| CDS-3UTR CCA 90 bp | CCACCCTGGGAACTGGCACAGAGTCTTGAGTGTTCCCTGGGATTTCTCAATCTGCCCTTTAATCTCTGCTaGGCTTGGACTGGTGTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PPWELAQSLECSLGFLNLPFNLC*AWTGVS Trigger: ACTAACACCAGTCCAAGCCCAGCAGAGATTAAAGGG...CAGATTGAGAAATCCCAGGGAACACTCAAGACTCTGTGCCAGTTCCCAGGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS-3UTR GCA 90 bp | GAATGGGAAGGAAAAACACCGGCATCGGCAGATGGAGTGTCAATTAGTGAGGGAGGTGTTAGTCCAGACTaGTGGATAAGGGCCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: EWEGKTPASADGVSISEGGVSPD*WIRAQK Trigger: TTTCTGGGCCCTTATCCAGCAGTCTGGACTAACACC...TCCCTCACTAATTGACACTCCATCTGCCGATGCCGGTGTTTTTCCTTCCCATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGTCTTGAGTGTTCCCTGGGATTTCTCAATCTGGAGGCATTGTGCAGGCAGGTTAGTCCAGACTGCTaGATAAGGGCCCAGAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: QSLECSLGFLNLEALCRQVSPDC*IRAQKT Trigger: AGTTTTCTGGGCCCTTATCCAGCAGTCTGGACTAAC...CTGCCTGCACAATGCCTCCAGATTGAGAAATCCCAGGGAACACTCAAGACTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| 3UTR CAA 72 bp | AAGGGAAATCATGATTTCCCCACTGAGTTCAACACCTaGGGAACAAATGCCTTCCCATCCCCACTCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KGNHDFPTEFNT*GTNAFPSPLSA Trigger: GGCAGAGAGTGGGGATGGGAAGGCATTTGTTCCCAAGGTGTTGAACTCAGTGGGGAAATCATGATTTCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS-3UTR GCA 90 bp | CTGGAGGCATTGTGCAGGCAGCAACCCATATTTAACTGCATGCCAAAAGATAACGGTTTGGCAAAGTTGTaGTCCTCAGCAAACCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEALCRQQPIFNCMPKDNGLAKL*SSANRW Trigger: CCACCGGTTTGCTGAGGAGCACAACTTTGCCAAACC...GTTATCTTTTGGCATGCAGTTAAATATGGGTTGCTGCCTGCACAATGCCTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011398.13 |
||
| CDS-3UTR CCA 90 bp | CTCGACTCCTTTTTGAGAGCCTTGCCATGTCATGCAGTTTGGCTTCAAATATTTACTTGCTCTTGGCCATaGCCACCCCCAATCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LDSFLRALPCHAVWLQIFTCSWP*PPPISG Trigger: GCCTGAGATTGGGGGTGGCCATGGCCAAGAGCAAGT...AAATATTTGAAGCCAAACTGCATGACATGGCAAGGCTCTCAAAAAGGAGTCGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000011398.13 |
||
| CDS-3UTR CCA 90 bp | GAATGGGAAGGAAAAACACCGGCATCGGCAGATGGAGTGTCAATTAGTGAGGGACCCTTTAATCTCTGCTaGGCTTGGACTGGTGTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: EWEGKTPASADGVSISEGPFNLC*AWTGVS Trigger: ACTAACACCAGTCCAAGCCCAGCAGAGATTAAAGGG...TCCCTCACTAATTGACACTCCATCTGCCGATGCCGGTGTTTTTCCTTCCCATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS-3UTR TCA 90 bp | GAAAAACACCGGCATCGGCAGATGGAGTGTCAATTAGTGAGGGATGAGGCCAGAAATTGCTCTTCTTCCTaGACACAAAGCTGTACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: EKHRHRQMECQLVRDEARNCSSS*TQSCTR Trigger: ACGAGTACAGCTTTGTGTTCAGGAAGAAGAGCAATT...TCTGGCCTCATCCCTCACTAATTGACACTCCATCTGCCGATGCCGGTGTTTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGATTTCTCAATCTGGAGGCATTGTGCAGGCAGCAACCCATATTTAACTGCGGTTTGGCAAAGTTGTaGTCCTCAGCAAACCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGFLNLEALCRQQPIFNCGLAKL*SSANLL Trigger: AAGCAGGTTTGCTGAGGAGCACAACTTTGCCAAACC...GCAGTTAAATATGGGTTGCTGCCTGCACAATGCCTCCAGATTGAGAAATCCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109254.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGATTTCTCAATCTGGAGGCATTGTGCAGGCAGCAACCCATATTTAACTGCCATTTGGTCATCAGATaGAGGGCCCGACTGTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: LGFLNLEALCRQQPIFNCHLVIR*RARLSL Trigger: TAATGACAGTCGGGCCCTCCATCTGATGACCAAATG...GCAGTTAAATATGGGTTGCTGCCTGCACAATGCCTCCAGATTGAGAAATCCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS-3UTR TCA 90 bp | GAATGGGAAGGAAAAACACCGGCATCGGCAGATGGAGTGTCAATTAGTGAGGGAAATTGCTCTTCTTCCTaGACACAAAGCTGTACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: EWEGKTPASADGVSISEGNCSSS*TQSCTR Trigger: ACGAGTACAGCTTTGTGTTCAGGAAGAAGAGCAATT...TCCCTCACTAATTGACACTCCATCTGCCGATGCCGGTGTTTTTCCTTCCCATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS-3UTR TCA 90 bp | CTAAGATATGAAACAGGGTCAAGGGAAATCATGATTTCCCCACTGAGTTCAACACTGCCTGTCGCCAGCTaGGGTAGTCCTTCAAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRYETGSREIMISPLSSTLPVAS*GSPSKS Trigger: AGACTTTGAAGGACTACCTCAGCTGGCGACAGGCAG...TGTTGAACTCAGTGGGGAAATCATGATTTCCCTTGACCCTGTTTCATATCTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS-3UTR TCA 90 bp | GAATGGGAAGGAAAAACACCGGCATCGGCAGATGGAGTGTCAATTAGTGAGGGAGCTCATTGTTGTAGTTaGTGTGGAACTCAGAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: EWEGKTPASADGVSISEGAHCCS*CGTQRT Trigger: TGTTCTCTGAGTTCCACATCAACTACAACAATGAGC...TCCCTCACTAATTGACACTCCATCTGCCGATGCCGGTGTTTTTCCTTCCCATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS-3UTR GCA 90 bp | AGGCATTGTGCAGGCAGCAACCCATATTTAACTGCATGCCAAAAGATAACTGCATTCCCCTTCCATTTCTaGTGGCAGCCTGACTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RHCAGSNPYLTACQKITAFPFHF*WQPDFL Trigger: CAAGAAGTCAGGCTGCCAGCAGAAATGGAAGGGGAA...TGCAGTTATCTTTTGGCATGCAGTTAAATATGGGTTGCTGCCTGCACAATGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS-3UTR CCA 90 bp | ATGATTATGGTAACAATTCCAGAAAAATCAATCCTGGAATGGTGCAGGATCCCCCTGTCTGGGCACATTTaGTCATCAGATGGAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: MIMVTIPEKSILEWCRIPLSGHI*SSDGGP Trigger: GGGCCCTCCATCTGATGACCAAATGTGCCCAGACAG...GGGGATCCTGCACCATTCCAGGATTGATTTTTCTGGAATTGTTACCATAATCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS-3UTR CCA 90 bp | CCAAGCCCGACTCGACTCCTTTTTGAGAGCCTTGCCATGTCATGCAGTTTGGCTTTTCCTGTACATGTGTaGCTCATTGTTGTAGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSPTRLLFESLAMSCSLAFPVHV*LIVVVD Trigger: ATCAACTACAACAATGAGCCACACATGTACAGGAAA...AGCCAAACTGCATGACATGGCAAGGCTCTCAAAAAGGAGTCGAGTCGGGCTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS-3UTR GCA 90 bp | GGTAACAATTCCAGAAAAATCAATCCTGGAATGGTGCAGGATCCCCAAACCATTGGTGTTAGTCCAGACTaGTGGATAAGGGCCCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GNNSRKINPGMVQDPQTIGVSPD*WIRAQK Trigger: TTTCTGGGCCCTTATCCAGCAGTCTGGACTAACACC...AATGGTTTGGGGATCCTGCACCATTCCAGGATTGATTTTTCTGGAATTGTTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGGGAAATCATGATTTCCCCACTGAGTTCAACACCTTGGGAACAAATGCCTCATTTGGTCATCAGATaGAGGGCCCGACTGTCATTA | + |
|
Preference number: 4 (lower is better) Translates to: SREIMISPLSSTPWEQMPHLVIR*RARLSL Trigger: TAATGACAGTCGGGCCCTCCATCTGATGACCAAATG...AGGCATTTGTTCCCAAGGTGTTGAACTCAGTGGGGAAATCATGATTTCCCTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS-3UTR TCA 90 bp | CTCGACTCCTTTTTGAGAGCCTTGCCATGTCATGCAGTTTGGCTTCAAATATTTAGGCCACGAGAGTCATaGACTTACTGGCTCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LDSFLRALPCHAVWLQIFRPRES*TYWLFF Trigger: AAAGAAGAGCCAGTAAGTTCATGACTCTCGTGGCCT...AAATATTTGAAGCCAAACTGCATGACATGGCAAGGCTCTCAAAAAGGAGTCGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS-3UTR GCA 90 bp | CTTCAAATATTTGGCTTCTCCATCCTCATTCACATTCGCATTCACACACACACATTCCCCTTCCATTTCTaGTGGCAGCCTGACTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LQIFGFSILIHIRIHTHTFPFHF*WQPDFL Trigger: CAAGAAGTCAGGCTGCCAGCAGAAATGGAAGGGGAA...TGTGTGTGTGTGAATGCGAATGTGAATGAGGATGGAGAAGCCAAATATTTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGGGAAATCATGATTTCCCCACTGAGTTCAACACCTTGGGAACAAATGCCTAGTAAAATACGTAACTaGAGGCAAACTGGGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SREIMISPLSSTPWEQMPSKIRN*RQTGRP Trigger: TGGCCTCCCAGTTTGCCTCCAGTTACGTATTTTACT...AGGCATTTGTTCCCAAGGTGTTGAACTCAGTGGGGAAATCATGATTTCCCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS-3UTR CCA 90 bp | CTTCAAATATTTGGCTTCTCCATCCTCATTCACATTCGCATTCACACACACACAAATCTCTGCTGGGCTTaGACTGGTGTTAGTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LQIFGFSILIHIRIHTHTNLCWA*TGVSPD Trigger: GTCTGGACTAACACCAGTCCAAGCCCAGCAGAGATT...TGTGTGTGTGTGAATGCGAATGTGAATGAGGATGGAGAAGCCAAATATTTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS-3UTR CCA 90 bp | GTTTGGCTTCAAATATTTGGCTTCTCCATCCTCATTCACATTCGCATTCACACAAATCTCTGCTGGGCTTaGACTGGTGTTAGTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VWLQIFGFSILIHIRIHTNLCWA*TGVSPD Trigger: GTCTGGACTAACACCAGTCCAAGCCCAGCAGAGATT...TGTGTGAATGCGAATGTGAATGAGGATGGAGAAGCCAAATATTTGAAGCCAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| 3UTR CAA 72 bp | CGACTCCTTTTTGAGAGCCTTGCCATGTCATGCAGTTaGGCTTCAAATATTTGGCTTCTCCATCCTCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLLFESLAMSCS*ASNIWLLHPHS Trigger: TGAATGAGGATGGAGAAGCCAAATATTTGAAGCCAAACTGCATGACATGGCAAGGCTCTCAAAAAGGAGTCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS-3UTR TCA 90 bp | GAGGGTAAAGTTTGGGCTCCTCTTTATCAGAGGTGGAAAGAGGTGACAGTTTTTTACTGGCTCTTCTTTTaGACCAATTGCTCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: EGKVWAPLYQRWKEVTVFYWLFF*TNCSSS Trigger: GGAAGAAGAGCAATTGGTTCAAAAGAAGAGCCAGTA...AAAAACTGTCACCTCTTTCCACCTCTGATAAAGAGGAGCCCAAACTTTACCCTC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS-3UTR TCA 90 bp | AGGCATTGTGCAGGCAGCAACCCATATTTAACTGCATGCCAAAAGATAACTGCATACTGGCTCTTCTTTTaGACCAATTGCTCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RHCAGSNPYLTACQKITAYWLFF*TNCSSS Trigger: GGAAGAAGAGCAATTGGTTCAAAAGAAGAGCCAGTA...TGCAGTTATCTTTTGGCATGCAGTTAAATATGGGTTGCTGCCTGCACAATGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS-3UTR TCA 90 bp | TTCTGCTTAAGCAGAACAAGATACACCACCCCCATATATCCCTCCTTCATCTGTGCTCATTGTTGTAGTTaGTGTGGAACTCAGAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: FCLSRTRYTTPIYPSFICAHCCS*CGTQRT Trigger: TGTTCTCTGAGTTCCACATCAACTACAACAATGAGC...ACAGATGAAGGAGGGATATATGGGGGTGGTGTATCTTGTTCTGCTTAAGCAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS-3UTR CCA 90 bp | GGTAACAATTCCAGAAAAATCAATCCTGGAATGGTGCAGGATCCCCAAACCATTAGTAAAATACGTAACTaGAGGCAAACTGGGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GNNSRKINPGMVQDPQTISKIRN*RQTGRP Trigger: TGGCCTCCCAGTTTGCCTCCAGTTACGTATTTTACT...AATGGTTTGGGGATCCTGCACCATTCCAGGATTGATTTTTCTGGAATTGTTACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGGGAAATCATGATTTCCCCACTGAGTTCAACACCTTGGGAACAAATGCCTTTTCCTGTACATGTGTaGCTCATTGTTGTAGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SREIMISPLSSTPWEQMPFPVHV*LIVVVD Trigger: ATCAACTACAACAATGAGCCACACATGTACAGGAAA...AGGCATTTGTTCCCAAGGTGTTGAACTCAGTGGGGAAATCATGATTTCCCTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS TCA 90 bp | CCGTCCAGCCGCACCACCACCCAGCAGTGCGGCAGGCATGTGTCCTaGACCTCAAAATTCCGCACGTACTCAAACTTGCTCTTGGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: PSSRTTTQQCGRHVS*TSKFRTYSNLLLAM Trigger: CATGGCCAAGAGCAAGTTTGAGTACGTGCGGAATTTTGAGGTTCAGGACACATGCCTGCCGCACTGCTGGGTGGTGGTGCGGCTGGACGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011398.13 |
||
| CDS-3UTR CAA 90 bp | CCACCCTGGGAACTGGCACAGAGTCTTGAGTGTTCCCTGGGATTTCTCAATCTGACTGTCTGGGCACATTaGGTCATCAGATGGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PPWELAQSLECSLGFLNLTVWAH*VIRWRA Trigger: GGCCCTCCATCTGATGACCAAATGTGCCCAGACAGT...CAGATTGAGAAATCCCAGGGAACACTCAAGACTCTGTGCCAGTTCCCAGGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
||
| CDS GCA 90 bp | GCAGGCATGTGTCCTGAACCTCAAAATTCCGCACGTACTCAAACTTaGTCTTGGCCATGGCCACCCCCAATCTCAGGCACCGTCTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: AGMCPEPQNSARTQT*SWPWPPPISGTVLK Trigger: TTTTAAGACGGTGCCTGAGATTGGGGGTGGCCATGGCCAAGAGCAAGTTTGAGTACGTGCGGAATTTTGAGGTTCAGGACACATGCCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011398.13 |
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| CDS GCA 90 bp | TCTGCTGGCAGCCTGACTTCTTGTGTTCTGACTTCTTCCACCTTTTaGCACACCAACACCGTCCCTTTCCTGTACATGTGTGGCTCATTG | + |
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Preference number: 5 (lower is better) Translates to: SAGSLTSCVLTSSTF*HTNTVPFLYMCGSL Trigger: CAATGAGCCACACATGTACAGGAAAGGGACGGTGTTGGTGTGGCAAAAGGTGGAAGAAGTCAGAACACAAGAAGTCAGGCTGCCAGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| CDS-3UTR CAA 90 bp | TTCGCATTCACACACACACACACACACACACACTTCCCTCTTGGATGTACACACACTGTCTGGGCACATTaGGTCATCAGATGGAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: FAFTHTHTHTHFPLGCTHTVWAH*VIRWRA Trigger: GGCCCTCCATCTGATGACCAAATGTGCCCAGACAGT...GTGTGTACATCCAAGAGGGAAGTGTGTGTGTGTGTGTGTGTGTGTGAATGCGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| CDS-3UTR CAA 90 bp | CAGAGTCTTGAGTGTTCCCTGGGATTTCTCAATCTGGAGGCATTGTGCAGGCAGAACAGAATCTCATTCTaGTCGGCCGTCAGAGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: QSLECSLGFLNLEALCRQNRISF*SAVRVP Trigger: GGGAACTCTGACGGCCGACAAGAATGAGATTCTGTT...CTGCCTGCACAATGCCTCCAGATTGAGAAATCCCAGGGAACACTCAAGACTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| CDS-3UTR CAA 90 bp | CCAAGCCCGACTCGACTCCTTTTTGAGAGCCTTGCCATGTCATGCAGTTTGGCTTTAGGTTTGGCAAAGTaGTGCTCCTCAGCAAACCTG | + |
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Preference number: 5 (lower is better) Translates to: PSPTRLLFESLAMSCSLALGLAK*CSSANL Trigger: CAGGTTTGCTGAGGAGCACAACTTTGCCAAACCTAA...AGCCAAACTGCATGACATGGCAAGGCTCTCAAAAAGGAGTCGAGTCGGGCTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109254.2 |
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| CDS-3UTR CAA 90 bp | CAGAGTCTTGAGTGTTCCCTGGGATTTCTCAATCTGGAGGCATTGTGCAGGCAGCGACTGTCATTAGGTTaGGCAAAGTTGTGCTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: QSLECSLGFLNLEALCRQRLSLG*AKLCSS Trigger: TGAGGAGCACAACTTTGCCAAACCTAATGACAGTCG...CTGCCTGCACAATGCCTCCAGATTGAGAAATCCCAGGGAACACTCAAGACTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| CDS CCA 90 bp | AACCAATTGCTCTTCTTCCTGAACACAAAGCTGTACTCGTCACTCTaGCCGTACGCAATCACAATGTCCTCCAGCTCCTCCATTACTGTC | + |
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Preference number: 5 (lower is better) Translates to: NQLLFFLNTKLYSSL*PYAITMSSSSSITV Trigger: GACAGTAATGGAGGAGCTGGAGGACATTGTGATTGCGTACGGCCAGAGTGACGAGTACAGCTTTGTGTTCAGGAAGAAGAGCAATTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| CDS TCA 90 bp | CCAACACCGTCCCTTTCCTGTACATGTGTGGCTCATTGTTGTAGTTaGTGTGGAACTCAGAGAACAGAATCTCATTCTTGTCGGCCGTCA | + |
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Preference number: 5 (lower is better) Translates to: PTPSLSCTCVAHCCS*CGTQRTESHSCRPS Trigger: TGACGGCCGACAAGAATGAGATTCTGTTCTCTGAGTTCCACATCAACTACAACAATGAGCCACACATGTACAGGAAAGGGACGGTGTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| CDS-3UTR CAA 90 bp | GAATGGGAAGGAAAAACACCGGCATCGGCAGATGGAGTGTCAATTAGTGAGGGATCCTTCAAAGTCTGGTaGCTAGGATACAACACGACT | + |
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Preference number: 5 (lower is better) Translates to: EWEGKTPASADGVSISEGSFKVW*LGYNTT Trigger: AGTCGTGTTGTATCCTAGCAACCAGACTTTGAAGGA...TCCCTCACTAATTGACACTCCATCTGCCGATGCCGGTGTTTTTCCTTCCCATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| CDS CCA 90 bp | TTCCACCTTTTGCCACACCAACACCGTCCCTTTCCTGTACATGTGTaGCTCATTGTTGTAGTTGATGTGGAACTCAGAGAACAGAATCTC | + |
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Preference number: 5 (lower is better) Translates to: FHLLPHQHRPFPVHV*LIVVVDVELREQNL Trigger: GAGATTCTGTTCTCTGAGTTCCACATCAACTACAACAATGAGCCACACATGTACAGGAAAGGGACGGTGTTGGTGTGGCAAAAGGTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| CDS-3UTR CAA 90 bp | TTCTGCTTAAGCAGAACAAGATACACCACCCCCATATATCCCTCCTTCATCTGTAACAGAATCTCATTCTaGTCGGCCGTCAGAGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: FCLSRTRYTTPIYPSFICNRISF*SAVRVP Trigger: GGGAACTCTGACGGCCGACAAGAATGAGATTCTGTT...ACAGATGAAGGAGGGATATATGGGGGTGGTGTATCTTGTTCTGCTTAAGCAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| CDS-3UTR CAA 90 bp | CTTCAAATATTTGGCTTCTCCATCCTCATTCACATTCGCATTCACACACACACAGACTTCTTCCACCTTTaGCCACACCAACACCGTCCC | + |
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Preference number: 5 (lower is better) Translates to: LQIFGFSILIHIRIHTHTDFFHL*PHQHRP Trigger: GGGACGGTGTTGGTGTGGCAAAAGGTGGAAGAAGTC...TGTGTGTGTGTGAATGCGAATGTGAATGAGGATGGAGAAGCCAAATATTTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| CDS-3UTR CAA 90 bp | GTTTGGCTTCAAATATTTGGCTTCTCCATCCTCATTCACATTCGCATTCACACAGACTTCTTCCACCTTTaGCCACACCAACACCGTCCC | + |
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Preference number: 5 (lower is better) Translates to: VWLQIFGFSILIHIRIHTDFFHL*PHQHRP Trigger: GGGACGGTGTTGGTGTGGCAAAAGGTGGAAGAAGTC...TGTGTGAATGCGAATGTGAATGAGGATGGAGAAGCCAAATATTTGAAGCCAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| CDS-3UTR CAA 90 bp | GAGGGTAAAGTTTGGGCTCCTCTTTATCAGAGGTGGAAAGAGGTGACAGTTTTTTGGCAGCCTGACTTCTaGTGTTCTGACTTCTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: EGKVWAPLYQRWKEVTVFWQPDF*CSDFFH Trigger: GTGGAAGAAGTCAGAACACAAGAAGTCAGGCTGCCA...AAAAACTGTCACCTCTTTCCACCTCTGATAAAGAGGAGCCCAAACTTTACCCTC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| CDS-3UTR CAA 90 bp | CTCGACTCCTTTTTGAGAGCCTTGCCATGTCATGCAGTTTGGCTTCAAATATTTTTAGGTTTGGCAAAGTaGTGCTCCTCAGCAAACCGG | + |
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Preference number: 5 (lower is better) Translates to: LDSFLRALPCHAVWLQIFLGLAK*CSSANR Trigger: CCGGTTTGCTGAGGAGCACAACTTTGCCAAACCTAA...AAATATTTGAAGCCAAACTGCATGACATGGCAAGGCTCTCAAAAAGGAGTCGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000011398.13 |
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| CDS-3UTR CAA 90 bp | AGGCATTGTGCAGGCAGCAACCCATATTTAACTGCATGCCAAAAGATAACTGCACGACTGTCATTAGGTTaGGCAAAGTTGTGCTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: RHCAGSNPYLTACQKITARLSLG*AKLCSS Trigger: TGAGGAGCACAACTTTGCCAAACCTAATGACAGTCG...TGCAGTTATCTTTTGGCATGCAGTTAAATATGGGTTGCTGCCTGCACAATGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| CDS-3UTR CAA 90 bp | GAATGGGAAGGAAAAACACCGGCATCGGCAGATGGAGTGTCAATTAGTGAGGGACTTCTTTTGAACCAATaGCTCTTCTTCCTGAACACA | + |
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Preference number: 5 (lower is better) Translates to: EWEGKTPASADGVSISEGLLLNQ*LFFLNT Trigger: TGTGTTCAGGAAGAAGAGCAATTGGTTCAAAAGAAG...TCCCTCACTAATTGACACTCCATCTGCCGATGCCGGTGTTTTTCCTTCCCATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| CDS-3UTR CAA 90 bp | ATGATTATGGTAACAATTCCAGAAAAATCAATCCTGGAATGGTGCAGGATCCCCTGGCAGCCTGACTTCTaGTGTTCTGACTTCTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: MIMVTIPEKSILEWCRIPWQPDF*CSDFFH Trigger: GTGGAAGAAGTCAGAACACAAGAAGTCAGGCTGCCA...GGGGATCCTGCACCATTCCAGGATTGATTTTTCTGGAATTGTTACCATAATCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| CDS-3UTR CAA 90 bp | GGTAACAATTCCAGAAAAATCAATCCTGGAATGGTGCAGGATCCCCAAACCATTTCCTTCAAAGTCTGGTaGCTAGGATACAACACGACT | + |
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Preference number: 5 (lower is better) Translates to: GNNSRKINPGMVQDPQTISFKVW*LGYNTT Trigger: AGTCGTGTTGTATCCTAGCAACCAGACTTTGAAGGA...AATGGTTTGGGGATCCTGCACCATTCCAGGATTGATTTTTCTGGAATTGTTACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| CDS-3UTR CAA 90 bp | GAGGGTAAAGTTTGGGCTCCTCTTTATCAGAGGTGGAAAGAGGTGACAGTTTTTCTTCTTTTGAACCAATaGCTCTTCTTCCTGAACACA | + |
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Preference number: 5 (lower is better) Translates to: EGKVWAPLYQRWKEVTVFLLLNQ*LFFLNT Trigger: TGTGTTCAGGAAGAAGAGCAATTGGTTCAAAAGAAG...AAAAACTGTCACCTCTTTCCACCTCTGATAAAGAGGAGCCCAAACTTTACCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| CDS TCA 72 bp | CGCACCACCACCCAGCAGTGCGGCAGGCATGTGTCCTaGACCTCAAAATTCCGCACGTACTCAAACTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: RTTTQQCGRHVS*TSKFRTYSNLL Trigger: GAGCAAGTTTGAGTACGTGCGGAATTTTGAGGTTCAGGACACATGCCTGCCGCACTGCTGGGTGGTGGTGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011398.13 |
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| CDS GCA 72 bp | TGGAGGGCCCGACTGTCATTAGGTTTGGCAAAGTTGTaGTCCTCAGCAAACCGGTGGAAATTCCGGCCGTCC | + |
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Preference number: 6 (lower is better) Translates to: WRARLSLGLAKL*SSANRWKFRPS Trigger: GGACGGCCGGAATTTCCACCGGTTTGCTGAGGAGCACAACTTTGCCAAACCTAATGACAGTCGGGCCCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011398.13 |
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| CDS CAA 72 bp | AGATGGAGGGCCCGACTGTCATTAGGTTTGGCAAAGTaGTGCTCCTCAGCAAACCGGTGGAAATTCCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: RWRARLSLGLAK*CSSANRWKFRP Trigger: CGGCCGGAATTTCCACCGGTTTGCTGAGGAGCACAACTTTGCCAAACCTAATGACAGTCGGGCCCTCCATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011398.13 |
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| CDS GCA 72 bp | TGTCCTGAACCTCAAAATTCCGCACGTACTCAAACTTaGTCTTGGCCATGGCCACCCCCAATCTCAGGCACC | + |
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Preference number: 6 (lower is better) Translates to: CPEPQNSARTQT*SWPWPPPISGT Trigger: GGTGCCTGAGATTGGGGGTGGCCATGGCCAAGAGCAAGTTTGAGTACGTGCGGAATTTTGAGGTTCAGGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011398.13 |
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| CDS GCA 72 bp | TCATTCTTGTCGGCCGTCAGAGTTCCCTTTAATCTCTaGTGGGCTTGGACTGGTGTTAGTCCAGACTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SFLSAVRVPFNL*WAWTGVSPDCW Trigger: CCAGCAGTCTGGACTAACACCAGTCCAAGCCCAGCAGAGATTAAAGGGAACTCTGACGGCCGACAAGAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| CDS CCA 72 bp | GAACCTCAAAATTCCGCACGTACTCAAACTTGCTCTTaGCCATGGCCACCCCCAATCTCAGGCACCGTCTTA | + |
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Preference number: 6 (lower is better) Translates to: EPQNSARTQTCS*PWPPPISGTVL Trigger: TAAGACGGTGCCTGAGATTGGGGGTGGCCATGGCCAAGAGCAAGTTTGAGTACGTGCGGAATTTTGAGGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011398.13 |
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| CDS CCA 72 bp | CTCTTCTTCCTGAACACAAAGCTGTACTCGTCACTCTaGCCGTACGCAATCACAATGTCCTCCAGCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LFFLNTKLYSSL*PYAITMSSSSS Trigger: GGAGGAGCTGGAGGACATTGTGATTGCGTACGGCCAGAGTGACGAGTACAGCTTTGTGTTCAGGAAGAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| CDS CCA 72 bp | TTCTTGTCGGCCGTCAGAGTTCCCTTTAATCTCTGCTaGGCTTGGACTGGTGTTAGTCCAGACTGCTGGATA | + |
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Preference number: 6 (lower is better) Translates to: FLSAVRVPFNLC*AWTGVSPDCWI Trigger: TATCCAGCAGTCTGGACTAACACCAGTCCAAGCCCAGCAGAGATTAAAGGGAACTCTGACGGCCGACAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| CDS CCA 72 bp | TTGCCACACCAACACCGTCCCTTTCCTGTACATGTGTaGCTCATTGTTGTAGTTGATGTGGAACTCAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: LPHQHRPFPVHV*LIVVVDVELRE Trigger: TTCTCTGAGTTCCACATCAACTACAACAATGAGCCACACATGTACAGGAAAGGGACGGTGTTGGTGTGGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| CDS TCA 72 bp | TCCCTTTCCTGTACATGTGTGGCTCATTGTTGTAGTTaGTGTGGAACTCAGAGAACAGAATCTCATTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: SLSCTCVAHCCS*CGTQRTESHSC Trigger: ACAAGAATGAGATTCTGTTCTCTGAGTTCCACATCAACTACAACAATGAGCCACACATGTACAGGAAAGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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| CDS CAA 72 bp | AGAGTCATGAACTTACTGGCTCTTCTTTTGAACCAATaGCTCTTCTTCCTGAACACAAAGCTGTACTCGTCA | + |
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Preference number: 6 (lower is better) Translates to: RVMNLLALLLNQ*LFFLNTKLYSS Trigger: TGACGAGTACAGCTTTGTGTTCAGGAAGAAGAGCAATTGGTTCAAAAGAAGAGCCAGTAAGTTCATGACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011398.13 ENSMUST00000109254.2 |
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