Pregenerated sensors for THEMIS3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024105Ensembl transcript IDs: ENSMUST00000024914.4
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAATCACGTCTCAACACCTGCGATTTCCTCTGGGCTCCCACCTCTaGGGGCTCCTTTTCGGCTCTAGAGAACTCCAGATACTCAGTTCC | + |
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Preference number: 1 (lower is better) Translates to: EITSQHLRFPLGSHL*GLLFGSRELQILSS Trigger: GGAACTGAGTATCTGGAGTTCTCTAGAGCCGAAAAGGAGCCCCCAGAGGTGGGAGCCCAGAGGAAATCGCAGGTGTTGAGACGTGATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| 3UTR TCA 90 bp | TCCACTGCATGTTCCCACTGTGATGGCAGTGGGGCCAGGTGGTCATaGACTCAAATCTCTGAAACTCTGAGCCCAAAGGAACCTTCCCTT | + |
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Preference number: 1 (lower is better) Translates to: STACSHCDGSGARWS*TQISETLSPKEPSL Trigger: AAGGGAAGGTTCCTTTGGGCTCAGAGTTTCAGAGATTTGAGTTCATGACCACCTGGCCCCACTGCCATCACAGTGGGAACATGCAGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| 3UTR TCA 90 bp | AGCCCATTACAGATGGTTGTGAGCCACCATTTTGTTGCTGGGAATTaGACTCAGGACCTCTGGAAGAGCAATCCCAGCCATCTCTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: SPLQMVVSHHFVAGN*TQDLWKSNPSHLSS Trigger: GCTGGAGAGATGGCTGGGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACAAAATGGTGGCTCACAACCATCTGTAATGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| 3UTR-3UTR CCA 90 bp | GGACATGGGAACCTTTCCGCTTCCCACCCACCAATCATGAGGTGGGCAGCTTTGACCTGCGATTTCCTCTaGGCTCCCACCTCTGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: GHGNLSASHPPIMRWAALTCDFL*APTSGG Trigger: GCCCCCAGAGGTGGGAGCCCAGAGGAAATCGCAGGT...CAAAGCTGCCCACCTCATGATTGGTGGGTGGGAAGCGGAAAGGTTCCCATGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| 3UTR-3UTR CCA 90 bp | AGCCATCTCTCCAGCCCAGCCGCAATGCTTTTAATAGGAGTCCCACAAAGGCTCCTGGGCTCCCACCTCTaGGGGCTCCTTTTCGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: SHLSSPAAMLLIGVPQRLLGSHL*GLLFGS Trigger: AGAGCCGAAAAGGAGCCCCCAGAGGTGGGAGCCCAG...GAGCCTTTGTGGGACTCCTATTAAAAGCATTGCGGCTGGGCTGGAGAGATGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| 3UTR-3UTR TCA 90 bp | GCCTTGATGAAGGGAGTTATGTTCCTGGGGGCTTATAGAAAGGGACATGGGAACTGCATGTTCCCACTGTaGTGGCAGTGGGGCCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: ALMKGVMFLGAYRKGHGNCMFPL*WQWGQV Trigger: CACCTGGCCCCACTGCCATCACAGTGGGAACATGCA...GTTCCCATGTCCCTTTCTATAAGCCCCCAGGAACATAACTCCCTTCATCAAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| 3UTR-3UTR TCA 90 bp | GGAATTGAACTCAGGACCTCTGGAAGAGCAATCCCAGCCATCTCTCCAGCCCAGAAATCTCTGAAACTCTaGGCCCAAAGGAACCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: GIELRTSGRAIPAISPAQKSLKL*AQRNLP Trigger: GGGAAGGTTCCTTTGGGCTCAGAGTTTCAGAGATTT...CTGGGCTGGAGAGATGGCTGGGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| 3UTR-3UTR TCA 90 bp | GCGTATGAGTACACTGTAGATTCAGACACACACACAAGAAGAGGGCGTCGGAGCCCCACCCCCATGAGCTaGTTATCCAAGCATTATGTC | + |
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Preference number: 2 (lower is better) Translates to: AYEYTVDSDTHTRRGRRSPTPMS*LSKHYV Trigger: GACATAATGCTTGGATAATCAGCTCATGGGGGTGGG...GCTCCGACGCCCTCTTCTTGTGTGTGTGTCTGAATCTACAGTGTACTCATACGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| 3UTR-3UTR CCA 90 bp | TGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAATCCCAGCCATCTCTCCAGAGGGAGTTATGTTCCTaGGGGCTTATAGAAAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: CWELNSGPLEEQSQPSLQRELCS*GLIERD Trigger: GTCCCTTTCTATAAGCCCCCAGGAACATAACTCCCT...CTGGAGAGATGGCTGGGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| 3UTR-3UTR TCA 90 bp | TTGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAATCCCAGCCATCTCTGGGGCCAGGTGGTCATaGACTCAAATCTCTGAAACT | + |
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Preference number: 2 (lower is better) Translates to: LLLGIELRTSGRAIPAISGARWS*TQISET Trigger: AGTTTCAGAGATTTGAGTTCATGACCACCTGGCCCC...AGAGATGGCTGGGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| 3UTR-3UTR TCA 90 bp | GCGTATGAGTACACTGTAGATTCAGACACACACACAAGAAGAGGGCGTCGGAGCCATTACAGATGGTTGTaGGCCACCATTTTGTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: AYEYTVDSDTHTRRGRRSHYRWL*ATILLL Trigger: CAGCAACAAAATGGTGGCTCACAACCATCTGTAATG...GCTCCGACGCCCTCTTCTTGTGTGTGTGTCTGAATCTACAGTGTACTCATACGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| 3UTR-3UTR TCA 90 bp | CTTGGTCTCCAGCATGCAGTACTTTTGGGAGATAATGGAGACTATGCTTTTGGGATGAACTCAAATCTCTaGAACTCTGAGCCCAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: LGLQHAVLLGDNGDYAFGMNSNL*NSEPKG Trigger: TCCTTTGGGCTCAGAGTTTCAGAGATTTGAGTTCAT...CCCAAAAGCATAGTCTCCATTATCTCCCAAAAGTACTGCATGCTGGAGACCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| 3UTR TCA 72 bp | TGGCAGTGGGGCCAGGTGGTCATGAACTCAAATCTCTaGAACTCTGAGCCCAAAGGAACCTTCCCTTCCGCA | + |
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Preference number: 3 (lower is better) Translates to: WQWGQVVMNSNL*NSEPKGTFPSA Trigger: TGCGGAAGGGAAGGTTCCTTTGGGCTCAGAGTTTCAGAGATTTGAGTTCATGACCACCTGGCCCCACTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| 3UTR-3UTR CAA 90 bp | GCCTTGATGAAGGGAGTTATGTTCCTGGGGGCTTATAGAAAGGGACATGGGAACATGAGGTGGGCAGCTTaGATCCACTGCATGTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: ALMKGVMFLGAYRKGHGNMRWAA*IHCMFP Trigger: TGGGAACATGCAGTGGATCAAAGCTGCCCACCTCAT...GTTCCCATGTCCCTTTCTATAAGCCCCCAGGAACATAACTCCCTTCATCAAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| 3UTR-3UTR CAA 90 bp | TTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAATCCCAGCCATCTCTCCATCGTGTGTTAAAGGCTaGGTCTCCAGCATGCAGTAC | + |
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Preference number: 3 (lower is better) Translates to: LLGIELRTSGRAIPAISPSCVKG*VSSMQY Trigger: GTACTGCATGCTGGAGACCAAGCCTTTAACACACGA...TGGAGAGATGGCTGGGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| 3UTR TCA 72 bp | TGTTCCCACTGTGATGGCAGTGGGGCCAGGTGGTCATaGACTCAAATCTCTGAAACTCTGAGCCCAAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: CSHCDGSGARWS*TQISETLSPKE Trigger: TTCCTTTGGGCTCAGAGTTTCAGAGATTTGAGTTCATGACCACCTGGCCCCACTGCCATCACAGTGGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR CCA 90 bp | GCCTTGATGAAGGGAGTTATGTTCCTGGGGGCTTATAGAAAGGGACATGGGAACGGCCCCTGCAGTCCATaGGGAGGAGCACTGTCAGCG | + |
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Preference number: 4 (lower is better) Translates to: ALMKGVMFLGAYRKGHGNGPCSP*GGALSA Trigger: CGCTGACAGTGCTCCTCCCCATGGACTGCAGGGGCC...GTTCCCATGTCCCTTTCTATAAGCCCCCAGGAACATAACTCCCTTCATCAAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR CCA 90 bp | CACCTGCGATTTCCTCTGGGCTCCCACCTCTGGGGGCTCCTTTTCGGCTCTAGAGCTCTCCATGCTTCATaGCAGCAGCAACATCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: HLRFPLGSHLWGLLFGSRALHAS*QQQHQR Trigger: TCTCTGATGTTGCTGCTGCCATGAAGCATGGAGAGC...TCTAGAGCCGAAAAGGAGCCCCCAGAGGTGGGAGCCCAGAGGAAATCGCAGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR CCA 90 bp | GGACATGGGAACCTTTCCGCTTCCCACCCACCAATCATGAGGTGGGCAGCTTTGCTGGTCACTCTGACGTaGCACGGCAGTCTTGTGACT | + |
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Preference number: 4 (lower is better) Translates to: GHGNLSASHPPIMRWAALLVTLT*HGSLVT Trigger: AGTCACAAGACTGCCGTGCCACGTCAGAGTGACCAG...CAAAGCTGCCCACCTCATGATTGGTGGGTGGGAAGCGGAAAGGTTCCCATGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR TCA 90 bp | GAGTTATGTTCCTGGGGGCTTATAGAAAGGGACATGGGAACCTTTCCGCTTCCCTGCGGAGATGGGGATTaGGTTCTGGAAGCGGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: ELCSWGLIERDMGTFPLPCGDGD*VLEAGR Trigger: CCTCCCCGCTTCCAGAACTCAATCCCCATCTCCGCA...GGGAAGCGGAAAGGTTCCCATGTCCCTTTCTATAAGCCCCCAGGAACATAACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR CCA 90 bp | AGCCATCTCTCCAGCCCAGCCGCAATGCTTTTAATAGGAGTCCCACAAAGGCTCACCTCCTGGATGCTCTaGAGAGGCCTGCATCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: SHLSSPAAMLLIGVPQRLTSWML*RGLHLS Trigger: AGAGAGATGCAGGCCTCTCCAGAGCATCCAGGAGGT...GAGCCTTTGTGGGACTCCTATTAAAAGCATTGCGGCTGGGCTGGAGAGATGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR TCA 90 bp | CCACTCCCCCACCCCCATGAGCTGATTATCCAAGCATTATGTCACAGTAACAGACTGTGCAGCTCACCGTaGATCTCGGCGGAAACCACA | + |
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Preference number: 4 (lower is better) Translates to: PLPHPHELIIQALCHSNRLCSSP*ISAETT Trigger: TGTGGTTTCCGCCGAGATTCACGGTGAGCTGCACAG...TCTGTTACTGTGACATAATGCTTGGATAATCAGCTCATGGGGGTGGGGGAGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR TCA 90 bp | GGAATTGAACTCAGGACCTCTGGAAGAGCAATCCCAGCCATCTCTCCAGCCCAGCCTGTACATGTCTGCTaGGGAGATTATGTCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GIELRTSGRAIPAISPAQPVHVC*GDYVLQ Trigger: CTGGAGGACATAATCTCCTCAGCAGACATGTACAGG...CTGGGCTGGAGAGATGGCTGGGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR GCA 90 bp | TTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAATCCCAGCCATCTCTCCACGTGCGTTTCCTCCCTaGAAGCATCTTCCACCTCAC | + |
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Preference number: 4 (lower is better) Translates to: LLGIELRTSGRAIPAISPRAFPP*KHLPPH Trigger: GTGAGGTGGAAGATGCTTGCAGGGAGGAAACGCACG...TGGAGAGATGGCTGGGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR GCA 90 bp | CCACTCCCCCACCCCCATGAGCTGATTATCCAAGCATTATGTCACAGTAACAGATCTTCCTCAGCACCTTaGATTGCAGCAGCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PLPHPHELIIQALCHSNRSSSAP*IAAASS Trigger: GGAGGAGGCTGCTGCAATGCAAGGTGCTGAGGAAGA...TCTGTTACTGTGACATAATGCTTGGATAATCAGCTCATGGGGGTGGGGGAGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR CCA 90 bp | TTTTGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAATCCCAGCCATCTTCCACGAAAGTGCTCTaGAACCAGGGGGCCAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: FCCWELNSGPLEEQSQPSSTKVL*NQGAKE Trigger: CTCCTTGGCCCCCTGGTTCCAGAGCACTTTCGTGGA...AGATGGCTGGGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR TCA 90 bp | TTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAATCCCAGCCATCTCTCCATCACCTCTTCAGTCTTaGGGATGGTTAAGAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: LLGIELRTSGRAIPAISPSPLQS*GWLRAA Trigger: GGCAGCTCTTAACCATCCTCAAGACTGAAGAGGTGA...TGGAGAGATGGCTGGGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR CCA 90 bp | GCGTATGAGTACACTGTAGATTCAGACACACACACAAGAAGAGGGCGTCGGAGCCCTGAATATCTTCCCTaGGTCACCTCCACTTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: AYEYTVDSDTHTRRGRRSPEYLP*VTSTCL Trigger: CAGACAAGTGGAGGTGACCCAGGGAAGATATTCAGG...GCTCCGACGCCCTCTTCTTGTGTGTGTGTCTGAATCTACAGTGTACTCATACGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR TCA 90 bp | AGCCATCTCTCCAGCCCAGCCGCAATGCTTTTAATAGGAGTCCCACAAAGGCTCCAGATTTGCCGTCACTaGGAAACAGGGATACAAAAC | + |
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Preference number: 4 (lower is better) Translates to: SHLSSPAAMLLIGVPQRLQICRH*ETGIQN Trigger: GTTTTGTATCCCTGTTTCTCAGTGACGGCAAATCTG...GAGCCTTTGTGGGACTCCTATTAAAAGCATTGCGGCTGGGCTGGAGAGATGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR GCA 90 bp | GCGTATGAGTACACTGTAGATTCAGACACACACACAAGAAGAGGGCGTCGGAGCGTTGGCTCTGAAAGATaGAAACGATCCCAGGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: AYEYTVDSDTHTRRGRRSVGSER*KRSQVG Trigger: TCCTACCTGGGATCGTTTGCATCTTTCAGAGCCAAC...GCTCCGACGCCCTCTTCTTGTGTGTGTGTCTGAATCTACAGTGTACTCATACGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR CCA 90 bp | TTGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAATCCCAGCCATCTCTATGGGGATTGAGTTCTaGAAGCGGGGAGGACTTCTA | + |
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Preference number: 4 (lower is better) Translates to: LLLGIELRTSGRAIPAISMGIEF*KRGGLL Trigger: TAGAAGTCCTCCCCGCTTCCAGAACTCAATCCCCAT...AGAGATGGCTGGGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATTTTGTTGCTGGGAATaGAACTCAGGACCTCTGGAAGAGCAATCCCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: TDGCEPPFCCWE*NSGPLEEQSQP Trigger: TGGCTGGGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACAAAATGGTGGCTCACAACCATCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR TCA 90 bp | GCCTTGATGAAGGGAGTTATGTTCCTGGGGGCTTATAGAAAGGGACATGGGAACGTGTTTCTCCTTTCCTaGGCTTCATGGGCAAATTGT | + |
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Preference number: 4 (lower is better) Translates to: ALMKGVMFLGAYRKGHGNVFLLS*ASWANC Trigger: ACAATTTGCCCATGAAGCTCAGGAAAGGAGAAACAC...GTTCCCATGTCCCTTTCTATAAGCCCCCAGGAACATAACTCCCTTCATCAAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR GCA 90 bp | TTGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAATCCCAGCCATCTCTAAAAGAAACCGGGTCTaGCATCAGTTGGAAGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: LLLGIELRTSGRAIPAISKRNRV*HQLEVS Trigger: GGAAACTTCCAACTGATGGCAGACCCGGTTTCTTTT...AGAGATGGCTGGGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR CCA 90 bp | TTTTGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAATCCCAGCCATCTTCGGGATTTCAAATGTaGTTTCTGGCCACTCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: FCCWELNSGPLEEQSQPSSGFQM*FLATPC Trigger: ACAGGGAGTGGCCAGAAACCACATTTGAAATCCCGA...AGATGGCTGGGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR GCA 90 bp | TTGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAATCCCAGCCATCTCTCTCTCACTGGGAACTTaGTTTCTTCCATGCTGTATA | + |
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Preference number: 4 (lower is better) Translates to: LLLGIELRTSGRAIPAISLSLGT*FLPCCI Trigger: TATACAGCATGGAAGAAAGCAAGTTCCCAGTGAGAG...AGAGATGGCTGGGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR CCA 90 bp | GCCTTGATGAAGGGAGTTATGTTCCTGGGGGCTTATAGAAAGGGACATGGGAACTCACCTCCACTTGTCTaGGCAAAGAGTTCTGATTTA | + |
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Preference number: 4 (lower is better) Translates to: ALMKGVMFLGAYRKGHGNSPPLV*AKSSDL Trigger: TAAATCAGAACTCTTTGCCCAGACAAGTGGAGGTGA...GTTCCCATGTCCCTTTCTATAAGCCCCCAGGAACATAACTCCCTTCATCAAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR TCA 90 bp | TTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAATCCCAGCCATCTCTCCATCTGATTTAAGGAACTaGTGTAAGAGTCCCAAGTTT | + |
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Preference number: 4 (lower is better) Translates to: LLGIELRTSGRAIPAISPSDLRN*CKSPKF Trigger: AAACTTGGGACTCTTACATCAGTTCCTTAAATCAGA...TGGAGAGATGGCTGGGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR CCA 90 bp | CTGATTATCCAAGCATTATGTCACAGTAACAGAATGATAACACAACGTATAGCATCTTCCACCTCACGATaGTGTCAATGGAGTAGAACC | + |
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Preference number: 4 (lower is better) Translates to: LIIQALCHSNRMITQRIASSTSR*CQWSRT Trigger: GGTTCTACTCCATTGACACCATCGTGAGGTGGAAGA...TGCTATACGTTGTGTTATCATTCTGTTACTGTGACATAATGCTTGGATAATCAG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS GCA 90 bp | CAATGGAGTAGAACCTGTCGTCCTGGCACTCCAGGAAGTGGCCCCTaGAGTCCATGGGGAGGAGCACTGTCAGCGGTGGCTTCTTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: QWSRTCRPGTPGSGP*SPWGGALSAVASSS Trigger: TGAGGAAGAAGCCACCGCTGACAGTGCTCCTCCCCATGGACTGCAGGGGCCACTTCCTGGAGTGCCAGGACGACAGGTTCTACTCCATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS GCA 90 bp | GTCACTCTGACGTGGCACGGCAGTCTTGTGACTTGGCATAGCTCCTaGAGGGTCCCTGGCCTAGCGCCGTCAAACAGCTCCAGGAACTTA | + |
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Preference number: 5 (lower is better) Translates to: VTLTWHGSLVTWHSS*RVPGLAPSNSSRNL Trigger: TAAGTTCCTGGAGCTGTTTGACGGCGCTAGGCCAGGGACCCTGCAGGAGCTATGCCAAGTCACAAGACTGCCGTGCCACGTCAGAGTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS CCA 90 bp | AGAGGGTCTACAGTCATGGAGGGATCTGGGCTGGTCACTCTGACGTaGCACGGCAGTCTTGTGACTTGGCATAGCTCCTGCAGGGTCCCT | + |
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Preference number: 5 (lower is better) Translates to: RGSTVMEGSGLVTLT*HGSLVTWHSSCRVP Trigger: AGGGACCCTGCAGGAGCTATGCCAAGTCACAAGACTGCCGTGCCACGTCAGAGTGACCAGCCCAGATCCCTCCATGACTGTAGACCCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR CAA 90 bp | CACCTGCGATTTCCTCTGGGCTCCCACCTCTGGGGGCTCCTTTTCGGCTCTAGATTCTTCCTCAGCACCTaGCATTGCAGCAGCCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: HLRFPLGSHLWGLLFGSRFFLST*HCSSLL Trigger: GAGGAGGCTGCTGCAATGCAAGGTGCTGAGGAAGAA...TCTAGAGCCGAAAAGGAGCCCCCAGAGGTGGGAGCCCAGAGGAAATCGCAGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS CCA 90 bp | TGCGTTTCCTCCCTGCAAGCATCTTCCACCTCACGATGGTGTCAATaGAGTAGAACCTGTCGTCCTGGCACTCCAGGAAGTGGCCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: CVSSLQASSTSRWCQ*SRTCRPGTPGSGPC Trigger: GCAGGGGCCACTTCCTGGAGTGCCAGGACGACAGGTTCTACTCCATTGACACCATCGTGAGGTGGAAGATGCTTGCAGGGAGGAAACGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR CAA 90 bp | CCACTCCCCCACCCCCATGAGCTGATTATCCAAGCATTATGTCACAGTAACAGACCTCAGCACCTTGCATaGCAGCAGCCTCCTCCCCCG | + |
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Preference number: 5 (lower is better) Translates to: PLPHPHELIIQALCHSNRPQHLA*QQPPPP Trigger: CGGGGGAGGAGGCTGCTGCAATGCAAGGTGCTGAGG...TCTGTTACTGTGACATAATGCTTGGATAATCAGCTCATGGGGGTGGGGGAGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS TCA 90 bp | CGGAAACCACACTCTTCTTCAGGGCCAGGAAGCACTCGTTGGCTCTaGAAGATGCAAACGATCCCAGGTAGGAGGTGTAGTCCTGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: RKPHSSSGPGSTRWL*KMQTIPGRRCSPGR Trigger: CCTCCCAGGACTACACCTCCTACCTGGGATCGTTTGCATCTTTCAGAGCCAACGAGTGCTTCCTGGCCCTGAAGAAGAGTGTGGTTTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS GCA 90 bp | CACACTCTTCTTCAGGGCCAGGAAGCACTCGTTGGCTCTGAAAGATaGAAACGATCCCAGGTAGGAGGTGTAGTCCTGGGAGGCCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: HTLLQGQEALVGSER*KRSQVGGVVLGGLE Trigger: TTCCAGGCCTCCCAGGACTACACCTCCTACCTGGGATCGTTTGCATCTTTCAGAGCCAACGAGTGCTTCCTGGCCCTGAAGAAGAGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR CAA 90 bp | GGAATTGAACTCAGGACCTCTGGAAGAGCAATCCCAGCCATCTCTCCAGCCCAGCTGGGTCACCTCCACTaGTCTGGGCAAAGAGTTCTG | + |
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Preference number: 5 (lower is better) Translates to: GIELRTSGRAIPAISPAQLGHLH*SGQRVL Trigger: CAGAACTCTTTGCCCAGACAAGTGGAGGTGACCCAG...CTGGGCTGGAGAGATGGCTGGGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR CAA 90 bp | CACCTGCGATTTCCTCTGGGCTCCCACCTCTGGGGGCTCCTTTTCGGCTCTAGAGTGATGATATCCCCTTaGGAGAATGACAGGTTTTCA | + |
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Preference number: 5 (lower is better) Translates to: HLRFPLGSHLWGLLFGSRVMISP*ENDRFS Trigger: TGAAAACCTGTCATTCTCCAAAGGGGATATCATCAC...TCTAGAGCCGAAAAGGAGCCCCCAGAGGTGGGAGCCCAGAGGAAATCGCAGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS CCA 90 bp | ATTGAGTTCTGGAAGCGGGGAGGACTTCTAGGGGCCACAGGACTCTaGGGAAGTCGGACAGAACGGGTTAAATCAGCCACAGTTTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: IEFWKRGGLLGATGL*GSRTERVKSATVSK Trigger: TTTTGAAACTGTGGCTGATTTAACCCGTTCTGTCCGACTTCCCCAGAGTCCTGTGGCCCCTAGAAGTCCTCCCCGCTTCCAGAACTCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS CCA 90 bp | AGGTGTAGTCCTGGGAGGCCTGGAAGCAGAGCTCTCCATGCTTCATaGCAGCAGCAACATCAGAGACAGCATAAAAATAACGACCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: RCSPGRPGSRALHAS*QQQHQRQHKNNDLS Trigger: GGAGAGGTCGTTATTTTTATGCTGTCTCTGATGTTGCTGCTGCCATGAAGCATGGAGAGCTCTGCTTCCAGGCCTCCCAGGACTACACCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR CAA 90 bp | TTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAATCCCAGCCATCTCTCCAGACCACGTCCAGAACTaGATCACCGTCCTTCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: LLGIELRTSGRAIPAISPDHVQN*ITVLQF Trigger: GAACTGAAGGACGGTGATCAAGTTCTGGACGTGGTC...TGGAGAGATGGCTGGGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR CAA 90 bp | CTTGGTCTCCAGCATGCAGTACTTTTGGGAGATAATGGAGACTATGCTTTTGGGCTGCGGAGATGGGGATaGAGTTCTGGAAGCGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: LGLQHAVLLGDNGDYAFGLRRWG*SSGSGE Trigger: CTCCCCGCTTCCAGAACTCAATCCCCATCTCCGCAG...CCCAAAAGCATAGTCTCCATTATCTCCCAAAAGTACTGCATGCTGGAGACCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS TCA 90 bp | TTCCTCAGCACCTTGCATTGCAGCAGCCTCCTCCCCCGACTCTCTTaGAAGCCAATTAAGGACAGTGTTTCTCCTTTCCTGAGCTTCATG | + |
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Preference number: 5 (lower is better) Translates to: FLSTLHCSSLLPRLS*KPIKDSVSPFLSFM Trigger: CATGAAGCTCAGGAAAGGAGAAACACTGTCCTTAATTGGCTTTCAAGAGAGTCGGGGGAGGAGGCTGCTGCAATGCAAGGTGCTGAGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR CAA 90 bp | AGCCATCTCTCCAGCCCAGCCGCAATGCTTTTAATAGGAGTCCCACAAAGGCTCCGGGTCTGCCATCAGTaGGAAGTTTCCTTCATATCT | + |
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Preference number: 5 (lower is better) Translates to: SHLSSPAAMLLIGVPQRLRVCHQ*EVSFIS Trigger: AGATATGAAGGAAACTTCCAACTGATGGCAGACCCG...GAGCCTTTGTGGGACTCCTATTAAAAGCATTGCGGCTGGGCTGGAGAGATGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR CAA 90 bp | GCCTTGATGAAGGGAGTTATGTTCCTGGGGGCTTATAGAAAGGGACATGGGAACACAAACTTCTGGGCTTaGGAACAGGTGGTGGTGGAC | + |
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Preference number: 5 (lower is better) Translates to: ALMKGVMFLGAYRKGHGNTNFWA*EQVVVD Trigger: GTCCACCACCACCTGTTCCAAAGCCCAGAAGTTTGT...GTTCCCATGTCCCTTTCTATAAGCCCCCAGGAACATAACTCCCTTCATCAAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR CAA 90 bp | CTTGGTCTCCAGCATGCAGTACTTTTGGGAGATAATGGAGACTATGCTTTTGGGGCAATGTTCAGGCACTaGAGCACTTCCACCCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: LGLQHAVLLGDNGDYAFGAMFRH*STSTLC Trigger: GCACAGGGTGGAAGTGCTCAAGTGCCTGAACATTGC...CCCAAAAGCATAGTCTCCATTATCTCCCAAAAGTACTGCATGCTGGAGACCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS CCA 90 bp | ATAACCAAGCAATTACTAAAGGCCAGAGACTCCTTAGTGACCTCCTaGATGCTCTGGAGAGGCCTGCATCTCTCTTTCCTGACATCAGCT | + |
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Preference number: 5 (lower is better) Translates to: ITKQLLKARDSLVTS*MLWRGLHLSFLTSA Trigger: AGCTGATGTCAGGAAAGAGAGATGCAGGCCTCTCCAGAGCATCCAGGAGGTCACTAAGGAGTCTCTGGCCTTTAGTAATTGCTTGGTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR CAA 90 bp | TTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAATCCCAGCCATCTCTCCAACTCTCACTGGGAACTaGCTTTCTTCCATGCTGTAT | + |
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Preference number: 5 (lower is better) Translates to: LLGIELRTSGRAIPAISPTLTGN*LSSMLY Trigger: ATACAGCATGGAAGAAAGCAAGTTCCCAGTGAGAGT...TGGAGAGATGGCTGGGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR CAA 90 bp | GGACATGGGAACCTTTCCGCTTCCCACCCACCAATCATGAGGTGGGCAGCTTTGTTTGGCTATGAGGCATaGTTCAATGATGACATTTTC | + |
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Preference number: 5 (lower is better) Translates to: GHGNLSASHPPIMRWAALFGYEA*FNDDIF Trigger: GAAAATGTCATCATTGAACAATGCCTCATAGCCAAA...CAAAGCTGCCCACCTCATGATTGGTGGGTGGGAAGCGGAAAGGTTCCCATGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS TCA 90 bp | CCCGACTCTCTTGAAAGCCAATTAAGGACAGTGTTTCTCCTTTCCTaGGCTTCATGGGCAAATTGTCTGCGGAGATGGGGATTGAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: PDSLESQLRTVFLLS*ASWANCLRRWGLSS Trigger: AGAACTCAATCCCCATCTCCGCAGACAATTTGCCCATGAAGCTCAGGAAAGGAGAAACACTGTCCTTAATTGGCTTTCAAGAGAGTCGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS-3UTR CAA 90 bp | TTTTGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAATCCCAGCCATCTCTTCCCTTTCTTTCCTaGGGAAATCTCAGAGGCAAC | + |
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Preference number: 5 (lower is better) Translates to: FCCWELNSGPLEEQSQPSLPFLS*GNLRGN Trigger: GTTGCCTCTGAGATTTCCCAAGGAAAGAAAGGGAAG...AGATGGCTGGGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS TCA 90 bp | AAGTTTCCTTCATATCTAAGAGGTATAGTGACCACGTCCAGAACTTaGTCACCGTCCTTCAGTTCTGCTCTGACGAAAACTGGCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: KFPSYLRGIVTTSRT*SPSFSSALTKTGSR Trigger: CCTGGAGCCAGTTTTCGTCAGAGCAGAACTGAAGGACGGTGATCAAGTTCTGGACGTGGTCACTATACCTCTTAGATATGAAGGAAACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS CCA 90 bp | CCACTAACACCTCACAGCTTATCTTCTCAATCGGGATTTCAAATGTaGTTTCTGGCCACTCCCTGTACATGTCTGCTGAGGAGATTATGT | + |
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Preference number: 5 (lower is better) Translates to: PLTPHSLSSQSGFQM*FLATPCTCLLRRLC Trigger: ACATAATCTCCTCAGCAGACATGTACAGGGAGTGGCCAGAAACCACATTTGAAATCCCGATTGAGAAGATAAGCTGTGAGGTGTTAGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS CCA 90 bp | GTTAAATCAGCCACAGTTTCAAAAGAAACCGGGTCTGCCATCAGTTaGAAGTTTCCTTCATATCTAAGAGGTATAGTGACCACGTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: VKSATVSKETGSAIS*KFPSYLRGIVTTSR Trigger: TCTGGACGTGGTCACTATACCTCTTAGATATGAAGGAAACTTCCAACTGATGGCAGACCCGGTTTCTTTTGAAACTGTGGCTGATTTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS GCA 72 bp | AGAACCTGTCGTCCTGGCACTCCAGGAAGTGGCCCCTaGAGTCCATGGGGAGGAGCACTGTCAGCGGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: RTCRPGTPGSGP*SPWGGALSAVA Trigger: AGCCACCGCTGACAGTGCTCCTCCCCATGGACTGCAGGGGCCACTTCCTGGAGTGCCAGGACGACAGGTTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS CCA 72 bp | CTGGTCACTCTGACGTGGCACGGCAGTCTTGTGACTTaGCATAGCTCCTGCAGGGTCCCTGGCCTAGCGCCG | + |
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Preference number: 6 (lower is better) Translates to: LVTLTWHGSLVT*HSSCRVPGLAP Trigger: CGGCGCTAGGCCAGGGACCCTGCAGGAGCTATGCCAAGTCACAAGACTGCCGTGCCACGTCAGAGTGACCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS GCA 72 bp | GGAGCACTGTCAGCGGTGGCTTCTTCCTCAGCACCTTaGATTGCAGCAGCCTCCTCCCCCGACTCTCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: GALSAVASSSAP*IAAASSPDSLE Trigger: TTCAAGAGAGTCGGGGGAGGAGGCTGCTGCAATGCAAGGTGCTGAGGAAGAAGCCACCGCTGACAGTGCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS CAA 90 bp | GTGCTCTGGAACCAGGGGGCCAAGGAGCTTCGGGTGATGTCTTGCTaGCACTCTAACCGTGCGTTTCCTCCCTGCAAGCATCTTCCACCT | + |
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Preference number: 6 (lower is better) Translates to: VLWNQGAKELRVMSC*HSNRAFPPCKHLPP Trigger: AGGTGGAAGATGCTTGCAGGGAGGAAACGCACGGTTAGAGTGCAAGCAAGACATCACCCGAAGCTCCTTGGCCCCCTGGTTCCAGAGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS TCA 72 bp | AGGCACTTGAGCACTTCCACCCTGTGCAGCTCACCGTaGATCTCGGCGGAAACCACACTCTTCTTCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: RHLSTSTLCSSP*ISAETTLFFRA Trigger: GGCCCTGAAGAAGAGTGTGGTTTCCGCCGAGATTCACGGTGAGCTGCACAGGGTGGAAGTGCTCAAGTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS CCA 72 bp | TGGAAGCGGGGAGGACTTCTAGGGGCCACAGGACTCTaGGGAAGTCGGACAGAACGGGTTAAATCAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: WKRGGLLGATGL*GSRTERVKSAT Trigger: TGTGGCTGATTTAACCCGTTCTGTCCGACTTCCCCAGAGTCCTGTGGCCCCTAGAAGTCCTCCCCGCTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS CCA 72 bp | TCCCTGCAAGCATCTTCCACCTCACGATGGTGTCAATaGAGTAGAACCTGTCGTCCTGGCACTCCAGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: SLQASSTSRWCQ*SRTCRPGTPGS Trigger: ACTTCCTGGAGTGCCAGGACGACAGGTTCTACTCCATTGACACCATCGTGAGGTGGAAGATGCTTGCAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS CCA 72 bp | TGCGTTTCCTCCCTGCAAGCATCTTCCACCTCACGATaGTGTCAATGGAGTAGAACCTGTCGTCCTGGCACT | + |
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Preference number: 6 (lower is better) Translates to: CVSSLQASSTSR*CQWSRTCRPGT Trigger: AGTGCCAGGACGACAGGTTCTACTCCATTGACACCATCGTGAGGTGGAAGATGCTTGCAGGGAGGAAACGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS TCA 72 bp | CACTCTTCTTCAGGGCCAGGAAGCACTCGTTGGCTCTaGAAGATGCAAACGATCCCAGGTAGGAGGTGTAGT | + |
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Preference number: 6 (lower is better) Translates to: HSSSGPGSTRWL*KMQTIPGRRCS Trigger: ACTACACCTCCTACCTGGGATCGTTTGCATCTTTCAGAGCCAACGAGTGCTTCCTGGCCCTGAAGAAGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS TCA 72 bp | CCTGGATGCTCTGGAGAGGCCTGCATCTCTCTTTCCTaGCATCAGCTATCCACGAACGCTCTTCTACCACTA | + |
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Preference number: 6 (lower is better) Translates to: PGCSGEACISLS*HQLSTNALLPL Trigger: TAGTGGTAGAAGAGCGTTCGTGGATAGCTGATGTCAGGAAAGAGAGATGCAGGCCTCTCCAGAGCATCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS TCA 72 bp | ACCTTGCATTGCAGCAGCCTCCTCCCCCGACTCTCTTaGAAGCCAATTAAGGACAGTGTTTCTCCTTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: TLHCSSLLPRLS*KPIKDSVSPFL Trigger: CAGGAAAGGAGAAACACTGTCCTTAATTGGCTTTCAAGAGAGTCGGGGGAGGAGGCTGCTGCAATGCAAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS CCA 72 bp | TTGATCACCGTCCTTCAGTTCTGCTCTGACGAAAACTaGCTCCAGGTCCACCACCGTGATGATATCCCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LITVLQFCSDEN*LQVHHRDDIPF Trigger: AAAGGGGATATCATCACGGTGGTGGACCTGGAGCCAGTTTTCGTCAGAGCAGAACTGAAGGACGGTGATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS CCA 72 bp | CCTGGGAGGCCTGGAAGCAGAGCTCTCCATGCTTCATaGCAGCAGCAACATCAGAGACAGCATAAAAATAAC | + |
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Preference number: 6 (lower is better) Translates to: PGRPGSRALHAS*QQQHQRQHKNN Trigger: GTTATTTTTATGCTGTCTCTGATGTTGCTGCTGCCATGAAGCATGGAGAGCTCTGCTTCCAGGCCTCCCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS CCA 72 bp | CAATTACTAAAGGCCAGAGACTCCTTAGTGACCTCCTaGATGCTCTGGAGAGGCCTGCATCTCTCTTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: QLLKARDSLVTS*MLWRGLHLSFL Trigger: CAGGAAAGAGAGATGCAGGCCTCTCCAGAGCATCCAGGAGGTCACTAAGGAGTCTCTGGCCTTTAGTAATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS CAA 72 bp | GACAGTGTTTCTCCTTTCCTGAGCTTCATGGGCAAATaGTCTGCGGAGATGGGGATTGAGTTCTGGAAGCGG | + |
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Preference number: 6 (lower is better) Translates to: DSVSPFLSFMGK*SAEMGIEFWKR Trigger: CCGCTTCCAGAACTCAATCCCCATCTCCGCAGACAATTTGCCCATGAAGCTCAGGAAAGGAGAAACACTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS CAA 72 bp | AGCTCCAGGAACTTACCTACGGCAAACAAGGGCAGTTaGACGTGGGCTTTAGTGGCAATGTTCAGGCACTTG | + |
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Preference number: 6 (lower is better) Translates to: SSRNLPTANKGS*TWALVAMFRHL Trigger: CAAGTGCCTGAACATTGCCACTAAAGCCCACGTCAAACTGCCCTTGTTTGCCGTAGGTAAGTTCCTGGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS CAA 90 bp | CCAATTAAGGACAGTGTTTCTCCTTTCCTGAGCTTCATGGGCAAATaGTCTGCGGAGATGGGGATTGAGTTCTGGAAGCGGGGAGGACTT | + |
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Preference number: 6 (lower is better) Translates to: PIKDSVSPFLSFMGK*SAEMGIEFWKRGGL Trigger: AAGTCCTCCCCGCTTCCAGAACTCAATCCCCATCTCCGCAGACAATTTGCCCATGAAGCTCAGGAAAGGAGAAACACTGTCCTTAATTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS GCA 72 bp | TTTTTCACCTCTTCAGTCTTGAGGATGGTTAAGAGCTaGCCACGTTTCAGAGGCTTTGGGTACTCCTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: FFTSSVLRMVKS*PRFRGFGYSLL Trigger: GAGCAAGGAGTACCCAAAGCCTCTGAAACGTGGGCAGCTCTTAACCATCCTCAAGACTGAAGAGGTGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS CAA 72 bp | ACTGGCTCCAGGTCCACCACCGTGATGATATCCCCTTaGGAGAATGACAGGTTTTCAAGTGACCCTGAATAT | + |
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Preference number: 6 (lower is better) Translates to: TGSRSTTVMISP*ENDRFSSDPEY Trigger: ATATTCAGGGTCACTTGAAAACCTGTCATTCTCCAAAGGGGATATCATCACGGTGGTGGACCTGGAGCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS CCA 72 bp | TTAGAACAAACTTCTGGGCTTTGGAACAGGTGGTGGTaGACGGCGAATAACCAAGCAATTACTAAAGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LEQTSGLWNRWW*TANNQAITKGQ Trigger: CTGGCCTTTAGTAATTGCTTGGTTATTCGCCGTCCACCACCACCTGTTCCAAAGCCCAGAAGTTTGTTCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS CAA 72 bp | AAGAGCTGCCCACGTTTCAGAGGCTTTGGGTACTCCTaGCTCTCCGACTGGACCACATTCATTATTTTAACT | + |
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Preference number: 6 (lower is better) Translates to: KSCPRFRGFGYS*LSDWTTFIILT Trigger: AGTTAAAATAATGAATGTGGTCCAGTCGGAGAGCAAGGAGTACCCAAAGCCTCTGAAACGTGGGCAGCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS CAA 90 bp | CTCTCCGACTGGACCACATTCATTATTTTAACTCTCACTGGGAACTaGCTTTCTTCCATGCTGTATATTTGTCTCATCGTTGTCCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: LSDWTTFIILTLTGN*LSSMLYICLIVVLG Trigger: GCCCAGGACAACGATGAGACAAATATACAGCATGGAAGAAAGCAAGTTCCCAGTGAGAGTTAAAATAATGAATGTGGTCCAGTCGGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS CCA 72 bp | GCCACAGTTTCAAAAGAAACCGGGTCTGCCATCAGTTaGAAGTTTCCTTCATATCTAAGAGGTATAGTGACC | + |
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Preference number: 6 (lower is better) Translates to: ATVSKETGSAIS*KFPSYLRGIVT Trigger: GGTCACTATACCTCTTAGATATGAAGGAAACTTCCAACTGATGGCAGACCCGGTTTCTTTTGAAACTGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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| CDS CAA 90 bp | TACATGTCTGCTGAGGAGATTATGTCCTCCAGTGTTGGTTCATCTTaGGCTATGAGGCATTGTTCAATGATGACATTTTCAATTCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: YMSAEEIMSSSVGSS*AMRHCSMMTFSILS Trigger: ACTGAGAATTGAAAATGTCATCATTGAACAATGCCTCATAGCCAAAGATGAACCAACACTGGAGGACATAATCTCCTCAGCAGACATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024914.4 |
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