Pregenerated sensors for THEM5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028148Ensembl transcript IDs: ENSMUST00000029794.11, ENSMUST00000198083.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTATACGGGTGTTGGGTTTGTACGGAAGGCACTGGACGTGTACCTaGTACTCCATGGAGGCCAGAAAAGGGTATTGGATTCCCTGGGAC | + |
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Preference number: 1 (lower is better) Translates to: GIRVLGLYGRHWTCT*YSMEARKGYWIPWD Trigger: GTCCCAGGGAATCCAATACCCTTTTCTGGCCTCCATGGAGTACCAGGTACACGTCCAGTGCCTTCCGTACAAACCCAACACCCGTATACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| 3UTR TCA 90 bp | CTCTGCCACCTGATTCCTGGGGACCCTTGTCTGTTATGTGGCCACTaGGTCATCAAGGTCAAGGTCATTGCTCCTGGGACTGTTCTTCCA | + |
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Preference number: 1 (lower is better) Translates to: LCHLIPGDPCLLCGH*VIKVKVIAPGTVLP Trigger: TGGAAGAACAGTCCCAGGAGCAATGACCTTGACCTTGATGACTCAGTGGCCACATAACAGACAAGGGTCCCCAGGAATCAGGTGGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198083.2 |
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| 3UTR TCA 90 bp | TTCCAACTGCAGCTGAAGGAAAACACCTGCAAGAAAGGAGTGAACTaGGTGCCAGGATCACTCGAGCAGGAGTTTGCCTGGGCATGGAAC | + |
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Preference number: 1 (lower is better) Translates to: FQLQLKENTCKKGVN*VPGSLEQEFAWAWN Trigger: GTTCCATGCCCAGGCAAACTCCTGCTCGAGTGATCCTGGCACTCAGTTCACTCCTTTCTTGCAGGTGTTTTCCTTCAGCTGCAGTTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198083.2 |
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| 3UTR CCA 90 bp | TGTTGGGTTTGTACGGAAGGCACTGGACGTGTACCTGGTACTCCATaGAGGCCAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACA | + |
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Preference number: 1 (lower is better) Translates to: CWVCTEGTGRVPGTP*RPEKGIGFPGTGVT Trigger: TGTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCCATGGAGTACCAGGTACACGTCCAGTGCCTTCCGTACAAACCCAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| 3UTR TCA 90 bp | AGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACAGATGGTTGTaGACCACCTTGTTGGTGCTGGAAATCAAGCAGCAGCTAGGGTTC | + |
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Preference number: 1 (lower is better) Translates to: RKGYWIPWDRSYRWL*TTLLVLEIKQQLGF Trigger: GAACCCTAGCTGCTGCTTGATTTCCAGCACCAACAAGGTGGTTCACAACCATCTGTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| 3UTR-3UTR TCA 90 bp | GGTACTCCATGGAGGCCAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACACCCTCCTCTGCCACCTaGTTCCTGGGGACCCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: GTPWRPEKGIGFPGTGVTPSSAT*FLGTLV Trigger: GACAAGGGTCCCCAGGAATCAGGTGGCAGAGGAGGG...TGTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCCATGGAGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCCTCCTCTGCCACCTGATTCCTGGGGACCCTTGTCTGTTATGTGGCCACCTGCCACCTGATTCCTaGGGACCCTTGTCTGTTATG | + |
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Preference number: 2 (lower is better) Translates to: FSLLCHLIPGDPCLLCGHLPPDS*GPLSVM Trigger: CATAACAGACAAGGGTCCCCAGGAATCAGGTGGCAG...GTGGCCACATAACAGACAAGGGTCCCCAGGAATCAGGTGGCAGAGGAGGGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCCAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACAGATGGTTGTGAACCCTCCTCTGCCACCTaGTTCCTGGGGACCCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: RPEKGIGFPGTGVTDGCEPSSAT*FLGTLV Trigger: GACAAGGGTCCCCAGGAATCAGGTGGCAGAGGAGGG...TTCACAACCATCTGTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| 3UTR CAA 90 bp | GCACTGGACGTGTACCTGGTACTCCATGGAGGCCAGAAAAGGGTATaGGATTCCCTGGGACAGGAGTTACAGATGGTTGTGAACCACCTT | + |
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Preference number: 2 (lower is better) Translates to: ALDVYLVLHGGQKRV*DSLGQELQMVVNHL Trigger: AAGGTGGTTCACAACCATCTGTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCCATGGAGTACCAGGTACACGTCCAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| 3UTR-3UTR CCA 90 bp | GTACTCCATGGAGGCCAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACAGCTGCCACCTGATTCCTaGGGACCCTTGTCTGTTATG | + |
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Preference number: 2 (lower is better) Translates to: VLHGGQKRVLDSLGQELQLPPDS*GPLSVM Trigger: CATAACAGACAAGGGTCCCCAGGAATCAGGTGGCAG...CTGTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCCATGGAGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| 3UTR CAA 90 bp | ACCCTTGTCTGTTATGTGGCCACTGAGTCATCAAGGTCAAGGTCATaGCTCCTGGGACTGTTCTTCCAACTGCAGCTGAAGGAAAACACC | + |
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Preference number: 2 (lower is better) Translates to: TLVCYVATESSRSRS*LLGLFFQLQLKENT Trigger: GGTGTTTTCCTTCAGCTGCAGTTGGAAGAACAGTCCCAGGAGCAATGACCTTGACCTTGATGACTCAGTGGCCACATAACAGACAAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198083.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGAGTTACAGATGGTTGTGAACCACCTTGTTGGTGCTGGAAATCAAGCAGCACCTGCAAGAAAGGAGTaGACTGAGTGCCAGGATCAC | + |
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Preference number: 2 (lower is better) Translates to: QELQMVVNHLVGAGNQAAPARKE*TECQDH Trigger: GTGATCCTGGCACTCAGTTCACTCCTTTCTTGCAGG...TGCTGCTTGATTTCCAGCACCAACAAGGTGGTTCACAACCATCTGTAACTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198083.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTACTCCATGGAGGCCAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACTCTTCCAACTGCAGCTaGAGGAAAACACCTGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: WYSMEARKGYWIPWDRSYSSNCS*RKTPAR Trigger: TCTTGCAGGTGTTTTCCTTCAGCTGCAGTTGGAAGA...GTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCCATGGAGTACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198083.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGGCCAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACAGATGGTTGTGCCCTTGTCTGTTATGTaGCCACTGAGTCATCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: GGQKRVLDSLGQELQMVVPLSVM*PLSHQG Trigger: ACCTTGATGACTCAGTGGCCACATAACAGACAAGGG...CACAACCATCTGTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGAGGCCAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACAGATGGTTGTGTGAACCACCTTGTTaGTGCTGGAAATCAAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: MEARKGYWIPWDRSYRWLCEPPC*CWKSSS Trigger: GCTGCTTGATTTCCAGCACCAACAAGGTGGTTCACA...CAACCATCTGTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| 3UTR CCA 72 bp | TGTACGGAAGGCACTGGACGTGTACCTGGTACTCCATaGAGGCCAGAAAAGGGTATTGGATTCCCTGGGACA | + |
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Preference number: 3 (lower is better) Translates to: CTEGTGRVPGTP*RPEKGIGFPGT Trigger: TGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCCATGGAGTACCAGGTACACGTCCAGTGCCTTCCGTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| 3UTR CCA 72 bp | CTGCCACCTGATTCCTGGGGACCCTTGTCTGTTATGTaGCCACTGAGTCATCAAGGTCAAGGTCATTGCTCC | + |
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Preference number: 3 (lower is better) Translates to: LPPDSWGPLSVM*PLSHQGQGHCS Trigger: GGAGCAATGACCTTGACCTTGATGACTCAGTGGCCACATAACAGACAAGGGTCCCCAGGAATCAGGTGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198083.2 |
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| 3UTR-3UTR CAA 90 bp | GGAGGCCAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACAGATGGTTGTGGATTCCTGGGGACCCTaGTCTGTTATGTGGCCACTG | + |
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Preference number: 3 (lower is better) Translates to: GGQKRVLDSLGQELQMVVDSWGP*SVMWPL Trigger: CAGTGGCCACATAACAGACAAGGGTCCCCAGGAATC...CACAACCATCTGTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGGTACTCCATGGAGGCCAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTCACTCGAGCAGGAGTTaGCCTGGGCATGGAACATTA | + |
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Preference number: 3 (lower is better) Translates to: PGTPWRPEKGIGFPGTGVHSSRS*PGHGTL Trigger: TAATGTTCCATGCCCAGGCAAACTCCTGCTCGAGTG...AACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCCATGGAGTACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198083.2 |
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| 3UTR TCA 72 bp | CTGATTCCTGGGGACCCTTGTCTGTTATGTGGCCACTaGGTCATCAAGGTCAAGGTCATTGCTCCTGGGACT | + |
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Preference number: 3 (lower is better) Translates to: LIPGDPCLLCGH*VIKVKVIAPGT Trigger: AGTCCCAGGAGCAATGACCTTGACCTTGATGACTCAGTGGCCACATAACAGACAAGGGTCCCCAGGAATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198083.2 |
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| 3UTR-3UTR CAA 90 bp | TCCCTGGGACAGGAGTTACAGATGGTTGTGAACCACCTTGTTGGTGCTGGAAATGGCCAGAAAAGGGTATaGGATTCCCTGGGACAGGAG | + |
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Preference number: 3 (lower is better) Translates to: SLGQELQMVVNHLVGAGNGQKRV*DSLGQE Trigger: CTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCC...ATTTCCAGCACCAACAAGGTGGTTCACAACCATCTGTAACTCCTGTCCCAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| 3UTR-3UTR CAA 90 bp | TCCATGGAGGCCAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACAGATGGTCAAGGTCAAGGTCATaGCTCCTGGGACTGTTCTTC | + |
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Preference number: 3 (lower is better) Translates to: SMEARKGYWIPWDRSYRWSRSRS*LLGLFF Trigger: GAAGAACAGTCCCAGGAGCAATGACCTTGACCTTGA...CCATCTGTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198083.2 |
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| 3UTR TCA 72 bp | TATTGGATTCCCTGGGACAGGAGTTACAGATGGTTGTaGACCACCTTGTTGGTGCTGGAAATCAAGCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: YWIPWDRSYRWL*TTLLVLEIKQQ Trigger: CTGCTGCTTGATTTCCAGCACCAACAAGGTGGTTCACAACCATCTGTAACTCCTGTCCCAGGGAATCCAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR GCA 90 bp | TTTCTCCCTCCTCTGCCACCTGATTCCTGGGGACCCTTGTCTGTTATGTGGCCAGTGAGCAAACCCTGGTaGCCCCTCCAGGTAGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: FLPPLPPDSWGPLSVMWPVSKPW*PLQVGA Trigger: GGCCCCTACCTGGAGGGGGCACCAGGGTTTGCTCAC...TGGCCACATAACAGACAAGGGTCCCCAGGAATCAGGTGGCAGAGGAGGGAGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR TCA 90 bp | TTCTCCCTCCTCTGCCACCTGATTCCTGGGGACCCTTGTCTGTTATGTGGCCACCATCAAGGCTGCCAGTaGCCCTCCGTGAGCAAACCC | + |
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Preference number: 4 (lower is better) Translates to: FSLLCHLIPGDPCLLCGHHQGCQ*PSVSKP Trigger: GGGTTTGCTCACGGAGGGTCACTGGCAGCCTTGATG...GTGGCCACATAACAGACAAGGGTCCCCAGGAATCAGGTGGCAGAGGAGGGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR TCA 90 bp | TTTCTCCCTCCTCTGCCACCTGATTCCTGGGGACCCTTGTCTGTTATGTGGCCAGGAGGAACCAAATGCTaGGGCCAGGTGGACTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: FLPPLPPDSWGPLSVMWPGGTKC*GQVDSG Trigger: CCCAGAGTCCACCTGGCCTCAGCATTTGGTTCCTCC...TGGCCACATAACAGACAAGGGTCCCCAGGAATCAGGTGGCAGAGGAGGGAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR TCA 90 bp | TTCTCCCTCCTCTGCCACCTGATTCCTGGGGACCCTTGTCTGTTATGTGGCCACGCAGGCAGCCCAGGCTaGGGCTGCAGATTTCTTTAC | + |
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Preference number: 4 (lower is better) Translates to: FSLLCHLIPGDPCLLCGHAGSPG*GCRFLY Trigger: GTAAAGAAATCTGCAGCCTCAGCCTGGGCTGCCTGC...GTGGCCACATAACAGACAAGGGTCCCCAGGAATCAGGTGGCAGAGGAGGGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198083.2 |
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| CDS-3UTR TCA 90 bp | GGATTCCCTGGGACAGGAGTTACAGATGGTTGTGAACCACCTTGTTGGTGCTGGCATCAAGGCTGCCAGTaGCCCTCCGTGAGCAAACCC | + |
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Preference number: 4 (lower is better) Translates to: GFPGTGVTDGCEPPCWCWHQGCQ*PSVSKP Trigger: GGGTTTGCTCACGGAGGGTCACTGGCAGCCTTGATG...CCAGCACCAACAAGGTGGTTCACAACCATCTGTAACTCCTGTCCCAGGGAATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR CCA 90 bp | ATGTGGCCACTGAGTCATCAAGGTCAAGGTCATTGCTCCTGGGACTGTTCTTCCAGGCCAGGTGGACTCTaGGCAGGAGACAGGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: MWPLSHQGQGHCSWDCSSRPGGL*AGDRGF Trigger: GAAGCCCCTGTCTCCTGCCCAGAGTCCACCTGGCCT...GGAAGAACAGTCCCAGGAGCAATGACCTTGACCTTGATGACTCAGTGGCCACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198083.2 |
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| CDS-3UTR TCA 90 bp | TGGTACTCCATGGAGGCCAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACGGAGGAACCAAATGCTaGGGCCAGGTGGACTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: WYSMEARKGYWIPWDRSYGGTKC*GQVDSG Trigger: CCCAGAGTCCACCTGGCCTCAGCATTTGGTTCCTCC...GTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCCATGGAGTACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR CCA 90 bp | ATTGGATTCCCTGGGACAGGAGTTACAGATGGTTGTGAACCACCTTGTTGGTGCAGGCCAGGTGGACTCTaGGCAGGAGACAGGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: IGFPGTGVTDGCEPPCWCRPGGL*AGDRGF Trigger: GAAGCCCCTGTCTCCTGCCCAGAGTCCACCTGGCCT...GCACCAACAAGGTGGTTCACAACCATCTGTAACTCCTGTCCCAGGGAATCCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR GCA 90 bp | GGTACTCCATGGAGGCCAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACACGGTCTGCTTGTCTCTaGTCTGGGCGATGCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: GTPWRPEKGIGFPGTGVTRSACL*SGRCRT Trigger: TGTCCTGCATCGCCCAGAGCAGAGACAAGCAGACCG...TGTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCCATGGAGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR CCA 90 bp | TGGTACTCCATGGAGGCCAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACCTCCAGGTAGGGGCCTaGCTGGAAAAGACAGACAGA | + |
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Preference number: 4 (lower is better) Translates to: WYSMEARKGYWIPWDRSYLQVGA*LEKTDR Trigger: TCTGTCTGTCTTTTCCAGCCAGGCCCCTACCTGGAG...GTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCCATGGAGTACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR CCA 90 bp | TCCATGGAGGCCAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACAGATGGCTCCAGGTAGGGGCCTaGCTGGAAAAGACAGACAGA | + |
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Preference number: 4 (lower is better) Translates to: SMEARKGYWIPWDRSYRWLQVGA*LEKTDR Trigger: TCTGTCTGTCTTTTCCAGCCAGGCCCCTACCTGGAG...CCATCTGTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCCATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| 3UTR CAA 72 bp | TTTCTCCCTCCTCTGCCACCTGATTCCTGGGGACCCTaGTCTGTTATGTGGCCACTGAGTCATCAAGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: FLPPLPPDSWGP*SVMWPLSHQGQ Trigger: TTGACCTTGATGACTCAGTGGCCACATAACAGACAAGGGTCCCCAGGAATCAGGTGGCAGAGGAGGGAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR TCA 90 bp | GGTACTCCATGGAGGCCAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACACCAGTCCTGTTTGTCTaGGGCAGTTTCCAGCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: GTPWRPEKGIGFPGTGVTPVLFV*GSFQPK Trigger: TTTGGGCTGGAAACTGCCTCAGACAAACAGGACTGG...TGTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCCATGGAGTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR TCA 90 bp | TGGTACTCCATGGAGGCCAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACCCAGTCCTGTTTGTCTaGGGCAGTTTCCAGCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: WYSMEARKGYWIPWDRSYPVLFV*GSFQPK Trigger: TTTGGGCTGGAAACTGCCTCAGACAAACAGGACTGG...GTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCCATGGAGTACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR GCA 90 bp | TCCATGGAGGCCAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACAGATGGGTGGCGGACAAGTCTTaGCACTCCCTGGAAACTTGT | + |
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Preference number: 4 (lower is better) Translates to: SMEARKGYWIPWDRSYRWVADKS*HSLETC Trigger: ACAAGTTTCCAGGGAGTGGCAAGACTTGTCCGCCAC...CCATCTGTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCCATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR GCA 90 bp | GGTACTCCATGGAGGCCAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACACTCTGGGCAGAATCTTaGAACCAGGGACTCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: GTPWRPEKGIGFPGTGVTLWAES*NQGLCG Trigger: TCCACAGAGTCCCTGGTTGCAAGATTCTGCCCAGAG...TGTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCCATGGAGTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR CCA 90 bp | TTGATTCCAACTACAGAAGGTTCTTGGACTGACCGTGGGGTGGTAAAAATGCCTACCCTTTGTTGTGGGTaGGGTAGTGGCAGGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: LIPTTEGSWTDRGVVKMPTLCCG*GSGRQP Trigger: GGGCTGCCTGCCACTACCCCACCCACAACAAAGGGT...AGGCATTTTTACCACCCCACGGTCAGTCCAAGAACCTTCTGTAGTTGGAATCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198083.2 |
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| CDS-3UTR TCA 90 bp | GGGACAGGAGTTACAGATGGTTGTGAACCACCTTGTTGGTGCTGGAAATCAAGCCAGACTCAGCATATCTaGACACCAGCTGGCATTGGG | + |
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Preference number: 4 (lower is better) Translates to: GTGVTDGCEPPCWCWKSSQTQHI*TPAGIG Trigger: CCCAATGCCAGCTGGTGTTCAGATATGCTGAGTCTG...GCTTGATTTCCAGCACCAACAAGGTGGTTCACAACCATCTGTAACTCCTGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR TCA 90 bp | CTACGGACGATTTTGATTCCAACTACAGAAGGTTCTTGGACTGACCGTGGGGTGCAGACTCAGCATATCTaGACACCAGCTGGCATTGGG | + |
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Preference number: 4 (lower is better) Translates to: LRTILIPTTEGSWTDRGVQTQHI*TPAGIG Trigger: CCCAATGCCAGCTGGTGTTCAGATATGCTGAGTCTG...CACCCCACGGTCAGTCCAAGAACCTTCTGTAGTTGGAATCAAAATCGTCCGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR TCA 90 bp | CGGACGATTTTGATTCCAACTACAGAAGGTTCTTGGACTGACCGTGGGGTGGTATCTTCCAACTGCAGCTaGAGGAAAACACCGGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: RTILIPTTEGSWTDRGVVSSNCS*RKTPED Trigger: GTCCTCCGGTGTTTTCCTTCAGCTGCAGTTGGAAGA...TACCACCCCACGGTCAGTCCAAGAACCTTCTGTAGTTGGAATCAAAATCGTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029794.11 |
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| CDS-3UTR GCA 90 bp | ATGGAGGCCAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACAGATGGTTGGTGGCGGACAAGTCTTaGCACTCCCTGGAAACTTGT | + |
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Preference number: 4 (lower is better) Translates to: MEARKGYWIPWDRSYRWLVADKS*HSLETC Trigger: ACAAGTTTCCAGGGAGTGGCAAGACTTGTCCGCCAC...CAACCATCTGTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR GCA 90 bp | TTGATTCCAACTACAGAAGGTTCTTGGACTGACCGTGGGGTGGTAAAAATGCCTCGGTCTGCTTGTCTCTaGTCTGGGCGATGCAGGACA | + |
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Preference number: 4 (lower is better) Translates to: LIPTTEGSWTDRGVVKMPRSACL*SGRCRT Trigger: TGTCCTGCATCGCCCAGAGCAGAGACAAGCAGACCG...AGGCATTTTTACCACCCCACGGTCAGTCCAAGAACCTTCTGTAGTTGGAATCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| 3UTR CAA 72 bp | GTGTACCTGGTACTCCATGGAGGCCAGAAAAGGGTATaGGATTCCCTGGGACAGGAGTTACAGATGGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VYLVLHGGQKRV*DSLGQELQMVV Trigger: CACAACCATCTGTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCCATGGAGTACCAGGTACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR TCA 90 bp | CCTCCTCTGCCACCTGATTCCTGGGGACCCTTGTCTGTTATGTGGCCACTGAGTTCAATCTTTTCTACTTaGATGTCCAGGACAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PPLPPDSWGPLSVMWPLSSIFST*MSRTAK Trigger: TTTGGCTGTCCTGGACATTCAAGTAGAAAAGATTGA...ACTCAGTGGCCACATAACAGACAAGGGTCCCCAGGAATCAGGTGGCAGAGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR CCA 90 bp | TCCCTGGGACAGGAGTTACAGATGGTTGTGAACCACCTTGTTGGTGCTGGAAATTCCTGCGGTGCAGGTTaGGTAATCCTCACTTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLGQELQMVVNHLVGAGNSCGAG*VILTLF Trigger: GAACAAAGTGAGGATTACCCAACCTGCACCGCAGGA...ATTTCCAGCACCAACAAGGTGGTTCACAACCATCTGTAACTCCTGTCCCAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198083.2 |
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| 3UTR CAA 72 bp | TGTTATGTGGCCACTGAGTCATCAAGGTCAAGGTCATaGCTCCTGGGACTGTTCTTCCAACTGCAGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CYVATESSRSRS*LLGLFFQLQLK Trigger: CTTCAGCTGCAGTTGGAAGAACAGTCCCAGGAGCAATGACCTTGACCTTGATGACTCAGTGGCCACATAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198083.2 |
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| CDS-3UTR TCA 90 bp | CCTGGTACTCCATGGAGGCCAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTATGGGTGGAAAAAGATaGCGTATTCATAGCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGTPWRPEKGIGFPGTGVMGGKR*RIHSLV Trigger: GACAAGGCTATGAATACGTCATCTTTTTCCACCCAT...AACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCCATGGAGTACCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR GCA 90 bp | AAAAGGGTATTGGATTCCCTGGGACAGGAGTTACAGATGGTTGTGAACCACCTTCTCTGGGCAGAATCTTaGAACCAGGGACTCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KRVLDSLGQELQMVVNHLLWAES*NQGLCG Trigger: TCCACAGAGTCCCTGGTTGCAAGATTCTGCCCAGAG...AAGGTGGTTCACAACCATCTGTAACTCCTGTCCCAGGGAATCCAATACCCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR CCA 90 bp | TACTCCATGGAGGCCAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACAGAAACACCAGCTGGCATTaGGAAGGGCATAATCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YSMEARKGYWIPWDRSYRNTSWH*EGHNLS Trigger: TGAAAGATTATGCCCTTCCCAATGCCAGCTGGTGTT...TCTGTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCCATGGAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR TCA 90 bp | TCCCTGGGACAGGAGTTACAGATGGTTGTGAACCACCTTGTTGGTGCTGGAAATTTAAGGCCCTGGATATaGTCTCTGTTGGATTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLGQELQMVVNHLVGAGNLRPWI*SLLDLK Trigger: CTTCAAATCCAACAGAGATCATATCCAGGGCCTTAA...ATTTCCAGCACCAACAAGGTGGTTCACAACCATCTGTAACTCCTGTCCCAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR TCA 90 bp | TTGGATTCCCTGGGACAGGAGTTACAGATGGTTGTGAACCACCTTGTTGGTGCTTGTTTAGACTTAGTGTaGATAGTCCTTCTCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LDSLGQELQMVVNHLVGACLDLV*IVLLQP Trigger: TGGCTGGAGAAGGACTATTCACACTAAGTCTAAACA...AGCACCAACAAGGTGGTTCACAACCATCTGTAACTCCTGTCCCAGGGAATCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR TCA 90 bp | GTGAACCACCTTGTTGGTGCTGGAAATCAAGCAGCAGCTAGGGTTCTTAACTGCTGTTTAGACTTAGTGTaGATAGTCCTTCTCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VNHLVGAGNQAAARVLNCCLDLV*IVLLQP Trigger: TGGCTGGAGAAGGACTATTCACACTAAGTCTAAACA...GCAGTTAAGAACCCTAGCTGCTGCTTGATTTCCAGCACCAACAAGGTGGTTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR CCA 90 bp | CAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACAGATGGTTGTGAACCACAACACCAGCTGGCATTaGGAAGGGCATAATCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QKRVLDSLGQELQMVVNHNTSWH*EGHNLS Trigger: TGAAAGATTATGCCCTTCCCAATGCCAGCTGGTGTT...GTGGTTCACAACCATCTGTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR CCA 90 bp | AGGCCAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACAGATGGTTGTGAATATCTGAACACCAGCTaGCATTGGGAAGGGCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: RPEKGIGFPGTGVTDGCEYLNTS*HWEGHN Trigger: ATTATGCCCTTCCCAATGCCAGCTGGTGTTCAGATA...TTCACAACCATCTGTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR TCA 90 bp | CAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACAGATGGTTGTGAACCACATGGGTGGAAAAAGATaGCGTATTCATAGCCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QKRVLDSLGQELQMVVNHMGGKR*RIHSLV Trigger: GACAAGGCTATGAATACGTCATCTTTTTCCACCCAT...GTGGTTCACAACCATCTGTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR CCA 90 bp | GTACTCCATGGAGGCCAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACAGTTCTTCTCAGATGGGTaGAAAAAGATGACGTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLHGGQKRVLDSLGQELQFFSDG*KKMTYS Trigger: TGAATACGTCATCTTTTTCCACCCATCTGAGAAGAA...CTGTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCCATGGAGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR CCA 90 bp | GCTCCTGGGACTGTTCTTCCAACTGCAGCTGAAGGAAAACACCTGCAAGAAAGGTTCTTCTCAGATGGGTaGAAAAAGATGACGTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: APGTVLPTAAEGKHLQERFFSDG*KKMTYS Trigger: TGAATACGTCATCTTTTTCCACCCATCTGAGAAGAA...CCTTTCTTGCAGGTGTTTTCCTTCAGCTGCAGTTGGAAGAACAGTCCCAGGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198083.2 |
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| 3UTR CAA 72 bp | AACATTCATTTATTTTTAGGTATACGGGTGTTGGGTTaGTACGGAAGGCACTGGACGTGTACCTGGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: NIHLFLGIRVLG*YGRHWTCTWYS Trigger: GGAGTACCAGGTACACGTCCAGTGCCTTCCGTACAAACCCAACACCCGTATACCTAAAAATAAATGAATGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR TCA 90 bp | TTGATTCCAACTACAGAAGGTTCTTGGACTGACCGTGGGGTGGTAAAAATGCCTTCAATCTTTTCTACTTaGATGTCCAGGACAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LIPTTEGSWTDRGVVKMPSIFST*MSRTAK Trigger: TTTGGCTGTCCTGGACATTCAAGTAGAAAAGATTGA...AGGCATTTTTACCACCCCACGGTCAGTCCAAGAACCTTCTGTAGTTGGAATCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS TCA 90 bp | TCCCTACCCTTTGTTGTGGGTGGGGTAGTGGCAGGCAGCCCAGGCTaGGGCTGCAGATTTCTTTACCGGAGGACTTGGCATAGACGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLPFVVGGVVAGSPG*GCRFLYRRTWHRRS Trigger: AGACCGTCTATGCCAAGTCCTCCGGTAAAGAAATCTGCAGCCTCAGCCTGGGCTGCCTGCCACTACCCCACCCACAACAAAGGGTAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198083.2 |
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| CDS-3UTR CAA 90 bp | GTGAACCACCTTGTTGGTGCTGGAAATCAAGCAGCAGCTAGGGTTCTTAACTGCAGGCGCCAGTCCTGTTaGTCTGAGGCAGTTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VNHLVGAGNQAAARVLNCRRQSC*SEAVSS Trigger: GCTGGAAACTGCCTCAGACAAACAGGACTGGCGCCT...GCAGTTAAGAACCCTAGCTGCTGCTTGATTTCCAGCACCAACAAGGTGGTTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR CAA 90 bp | ACTCCATGGAGGCCAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACAGATTCTCTGGGCAGAATCTaGCAACCAGGGACTCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TPWRPEKGIGFPGTGVTDSLGRI*QPGTLW Trigger: CCACAGAGTCCCTGGTTGCAAGATTCTGCCCAGAGA...ATCTGTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTGGCCTCCATGGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR CAA 90 bp | CCTCCTCTGCCACCTGATTCCTGGGGACCCTTGTCTGTTATGTGGCCACTGAGTTTAGGATTTGACTTTTaGCCCTCATCTTCCCTACCC | + |
|
Preference number: 5 (lower is better) Translates to: PPLPPDSWGPLSVMWPLSLGFDF*PSSSLP Trigger: GGGTAGGGAAGATGAGGGCAAAAAGTCAAATCCTAA...ACTCAGTGGCCACATAACAGACAAGGGTCCCCAGGAATCAGGTGGCAGAGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198083.2 |
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| CDS GCA 90 bp | GAAGGAAAACACCGGAGGACTTGGCATAGACGGTCTGCTTGTCTCTaGTCTGGGCGATGCAGGACATGTAGAGTTTCTGGTCTTCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: EGKHRRTWHRRSACL*SGRCRTCRVSGLQS Trigger: AGATTGAAGACCAGAAACTCTACATGTCCTGCATCGCCCAGAGCAGAGACAAGCAGACCGTCTATGCCAAGTCCTCCGGTGTTTTCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029794.11 |
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| CDS-3UTR CAA 90 bp | CAGAAAAGGGTATTGGATTCCCTGGGACAGGAGTTACAGATGGTTGTGAACCACTCTCTGGGCAGAATCTaGCAACCAGGGACTCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QKRVLDSLGQELQMVVNHSLGRI*QPGTLW Trigger: CCACAGAGTCCCTGGTTGCAAGATTCTGCCCAGAGA...GTGGTTCACAACCATCTGTAACTCCTGTCCCAGGGAATCCAATACCCTTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR CAA 90 bp | TTGATTCCAACTACAGAAGGTTCTTGGACTGACCGTGGGGTGGTAAAAATGCCTAGGCGCCAGTCCTGTTaGTCTGAGGCAGTTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LIPTTEGSWTDRGVVKMPRRQSC*SEAVSS Trigger: GCTGGAAACTGCCTCAGACAAACAGGACTGGCGCCT...AGGCATTTTTACCACCCCACGGTCAGTCCAAGAACCTTCTGTAGTTGGAATCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR CAA 90 bp | AAGGTCATTGCTCCTGGGACTGTTCTTCCAACTGCAGCTGAAGGAAAACACCTGGTCCTGCGGTGCAGGTaGGGTAATCCTCACTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: KVIAPGTVLPTAAEGKHLVLRCR*GNPHFV Trigger: AACAAAGTGAGGATTACCCAACCTGCACCGCAGGAC...CAGGTGTTTTCCTTCAGCTGCAGTTGGAAGAACAGTCCCAGGAGCAATGACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198083.2 |
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| CDS GCA 90 bp | CGGAGGACTTGGCATAGACGGTCTGCTTGTCTCTGCTCTGGGCGATaGAGGACATGTAGAGTTTCTGGTCTTCAATCTTTTCTACTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: RRTWHRRSACLCSGR*RTCRVSGLQSFLLE Trigger: TTCAAGTAGAAAAGATTGAAGACCAGAAACTCTACATGTCCTGCATCGCCCAGAGCAGAGACAAGCAGACCGTCTATGCCAAGTCCTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS GCA 90 bp | AGATTTCTTTACCGGAGGACTTGGCATAGACGGTCTGCTTGTCTCTaGTCTGGGCGATGCAGGACATGTAGAGTTTCTGGTCTTCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: RFLYRRTWHRRSACL*SGRCRTCRVSGLQS Trigger: AGATTGAAGACCAGAAACTCTACATGTCCTGCATCGCCCAGAGCAGAGACAAGCAGACCGTCTATGCCAAGTCCTCCGGTAAAGAAATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198083.2 |
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| CDS-3UTR CAA 90 bp | TTTCTCCCTCCTCTGCCACCTGATTCCTGGGGACCCTTGTCTGTTATGTGGCCATTCAATCTTTTCTACTaGAATGTCCAGGACAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: FLPPLPPDSWGPLSVMWPFNLFY*NVQDSQ Trigger: TTGGCTGTCCTGGACATTCAAGTAGAAAAGATTGAA...TGGCCACATAACAGACAAGGGTCCCCAGGAATCAGGTGGCAGAGGAGGGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR CAA 90 bp | TTTCTCCCTCCTCTGCCACCTGATTCCTGGGGACCCTTGTCTGTTATGTGGCCAACGGGGATCAAGTTTTaGAACTTGATGTTTAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: FLPPLPPDSWGPLSVMWPTGIKF*NLMFRL Trigger: AAGTCTAAACATCAAGTTCAAAAACTTGATCCCCGT...TGGCCACATAACAGACAAGGGTCCCCAGGAATCAGGTGGCAGAGGAGGGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR CAA 90 bp | CTGCCACCTGATTCCTGGGGACCCTTGTCTGTTATGTGGCCACTGAGTCATCAATTCAATCTTTTCTACTaGAATGTCCAGGACAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LPPDSWGPLSVMWPLSHQFNLFY*NVQDSQ Trigger: TTGGCTGTCCTGGACATTCAAGTAGAAAAGATTGAA...TTGATGACTCAGTGGCCACATAACAGACAAGGGTCCCCAGGAATCAGGTGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS-3UTR CAA 90 bp | CTACGGACGATTTTGATTCCAACTACAGAAGGTTCTTGGACTGACCGTGGGGTGTGGGTAATCCTCACTTaGTTCCCTTTCTCTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LRTILIPTTEGSWTDRGVWVILT*FPFSSS Trigger: GGATGAAGAGAAAGGGAACAAAGTGAGGATTACCCA...CACCCCACGGTCAGTCCAAGAACCTTCTGTAGTTGGAATCAAAATCGTCCGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198083.2 |
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| CDS TCA 72 bp | AGTTTTCGAATATGTCTCATCCATCAAGGCTGCCAGTaGCCCTCCGTGAGCAAACCCTGGTGCCCCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SFRICLIHQGCQ*PSVSKPWCPLQ Trigger: CTGGAGGGGGCACCAGGGTTTGCTCACGGAGGGTCACTGGCAGCCTTGATGGATGAGACATATTCGAAAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS GCA 72 bp | CACCGGAGGACTTGGCATAGACGGTCTGCTTGTCTCTaGTCTGGGCGATGCAGGACATGTAGAGTTTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: HRRTWHRRSACL*SGRCRTCRVSG Trigger: ACCAGAAACTCTACATGTCCTGCATCGCCCAGAGCAGAGACAAGCAGACCGTCTATGCCAAGTCCTCCGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029794.11 |
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| CDS CCA 72 bp | CTTCCAACTGCAGCTGAAGGAAAACACCGGAGGACTTaGCATAGACGGTCTGCTTGTCTCTGCTCTGGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: LPTAAEGKHRRT*HRRSACLCSGR Trigger: TCGCCCAGAGCAGAGACAAGCAGACCGTCTATGCCAAGTCCTCCGGTGTTTTCCTTCAGCTGCAGTTGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029794.11 |
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| CDS CAA 90 bp | TGTCCTTCCAGTTGTATGGACCTGGTAAAGAGGCGCCAGTCCTGTTaGTCTGAGGCAGTTTCCAGCCCAAATGGGAGCTTAAGGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CPSSCMDLVKRRQSC*SEAVSSPNGSLRPW Trigger: CCAGGGCCTTAAGCTCCCATTTGGGCTGGAAACTGCCTCAGACAAACAGGACTGGCGCCTCTTTACCAGGTCCATACAACTGGAAGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS TCA 72 bp | TATGGACCTGGTAAAGAGGCGCCAGTCCTGTTTGTCTaGGGCAGTTTCCAGCCCAAATGGGAGCTTAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: YGPGKEAPVLFV*GSFQPKWELKA Trigger: GGCCTTAAGCTCCCATTTGGGCTGGAAACTGCCTCAGACAAACAGGACTGGCGCCTCTTTACCAGGTCCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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| CDS GCA 72 bp | TACCGGAGGACTTGGCATAGACGGTCTGCTTGTCTCTaGTCTGGGCGATGCAGGACATGTAGAGTTTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: YRRTWHRRSACL*SGRCRTCRVSG Trigger: ACCAGAAACTCTACATGTCCTGCATCGCCCAGAGCAGAGACAAGCAGACCGTCTATGCCAAGTCCTCCGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198083.2 |
||
| CDS CAA 90 bp | AGACTTCTTCTCAGATGGGTGGAAAAAGATGACGTATTCATAGCCTaGTCCTTCCAGTTGTATGGACCTGGTAAAGAGGCGCCAGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RLLLRWVEKDDVFIA*SFQLYGPGKEAPVL Trigger: CAGGACTGGCGCCTCTTTACCAGGTCCATACAACTGGAAGGACAAGGCTATGAATACGTCATCTTTTTCCACCCATCTGAGAAGAAGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
||
| CDS CAA 90 bp | GGCGATGCAGGACATGTAGAGTTTCTGGTCTTCAATCTTTTCTACTaGAATGTCCAGGACAGCCAAAGAGCCCACGGGGATCAAGTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: GDAGHVEFLVFNLFY*NVQDSQRAHGDQVF Trigger: AAAAACTTGATCCCCGTGGGCTCTTTGGCTGTCCTGGACATTCAAGTAGAAAAGATTGAAGACCAGAAACTCTACATGTCCTGCATCGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
||
| CDS CAA 72 bp | CTCAGATGGGTGGAAAAAGATGACGTATTCATAGCCTaGTCCTTCCAGTTGTATGGACCTGGTAAAGAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LRWVEKDDVFIA*SFQLYGPGKEA Trigger: CGCCTCTTTACCAGGTCCATACAACTGGAAGGACAAGGCTATGAATACGTCATCTTTTTCCACCCATCTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
||
| CDS CAA 72 bp | GGACATGTAGAGTTTCTGGTCTTCAATCTTTTCTACTaGAATGTCCAGGACAGCCAAAGAGCCCACGGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GHVEFLVFNLFY*NVQDSQRAHGD Trigger: ATCCCCGTGGGCTCTTTGGCTGTCCTGGACATTCAAGTAGAAAAGATTGAAGACCAGAAACTCTACATGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
||
| CDS TCA 72 bp | GACAGACAGACTTCTTCTCAGATGGGTGGAAAAAGATaGCGTATTCATAGCCTTGTCCTTCCAGTTGTATGG | + |
|
Preference number: 6 (lower is better) Translates to: DRQTSSQMGGKR*RIHSLVLPVVW Trigger: CCATACAACTGGAAGGACAAGGCTATGAATACGTCATCTTTTTCCACCCATCTGAGAAGAAGTCTGTCTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
||
| CDS TCA 72 bp | TCCACTCCTAAAAGTCCTAGACTCCAGCTTAGGATTTaGCTTTTTGCCCTCATCTTCCCTACCCTTTGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: STPKSPRLQLRI*LFALIFPTLCC Trigger: ACAACAAAGGGTAGGGAAGATGAGGGCAAAAAGTCAAATCCTAAGCTGGAGTCTAGGACTTTTAGGAGTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198083.2 |
||
| CDS CCA 72 bp | ATTCTTGATACAGACTCAGCATATCTGAACACCAGCTaGCATTGGGAAGGGCATAATCTTTCAAATCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ILDTDSAYLNTS*HWEGHNLSNLS Trigger: AGACAGATTTGAAAGATTATGCCCTTCCCAATGCCAGCTGGTGTTCAGATATGCTGAGTCTGTATCAAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029794.11 ENSMUST00000198083.2 |
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