Pregenerated sensors for THEGL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029248Ensembl transcript IDs: ENSMUST00000031161.11, ENSMUST00000117880.8, ENSMUST00000118941.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | ACAGCGGTGTTTTCTGGAAGTCTCATGTCTGGGAGGTaGTCAGTAAGATGTAAATACCAAGGCTGGGAACAA | + |
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Preference number: 3 (lower is better) Translates to: TAVFSGSLMSGR*SVRCKYQGWEQ Trigger: TTGTTCCCAGCCTTGGTATTTACATCTTACTGATCACCTCCCAGACATGAGACTTCCAGAAAACACCGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031161.11 |
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| CDS-3UTR TCA 90 bp | AGGTCCCCAAACTTGGTAAAGACAAGATCACACACGGTGCCATCTGACGCTCACGCACCTCCAGGAGCCTaGGCACAAGGGGCTTCGGTT | + |
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Preference number: 4 (lower is better) Translates to: RSPNLVKTRSHTVPSDAHAPPGA*AQGASV Trigger: AACCGAAGCCCCTTGTGCTCAGGCTCCTGGAGGTGC...GTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCTTTACCAAGTTTGGGGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR TCA 90 bp | GTAAGGTCCCCAAACTTGGTAAAGACAAGATCACACACGGTGCCATCTGACGCTGCACCTCCAGGAGCCTaGGCACAAGGGGCTTCGGTT | + |
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Preference number: 4 (lower is better) Translates to: VRSPNLVKTRSHTVPSDAAPPGA*AQGASV Trigger: AACCGAAGCCCCTTGTGCTCAGGCTCCTGGAGGTGC...AGCGTCAGATGGCACCGTGTGTGATCTTGTCTTTACCAAGTTTGGGGACCTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR GCA 90 bp | AGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTTTCTGGAAGTCTCATGCCTCGTCACCATTCTaGACCTCCAGGAGCCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: RSHTVPSDAHSGVFWKSHASSPF*TSRSLS Trigger: GCTCAGGCTCCTGGAGGTGCAGAATGGTGACGAGGC...ATGAGACTTCCAGAAAACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR GCA 90 bp | CCAAACTTGGTAAAGACAAGATCACACACGGTGCCATCTGACGCTCACAGCGGTGCCTCGTCACCATTCTaGACCTCCAGGAGCCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: PNLVKTRSHTVPSDAHSGASSPF*TSRSLS Trigger: GCTCAGGCTCCTGGAGGTGCAGAATGGTGACGAGGC...ACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCTTTACCAAGTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR GCA 90 bp | CAAGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTTTCTGGAAGTCTCAGGAATCACTGGTCTTaGGGGGCTCCAGGGGCTCAA | + |
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Preference number: 4 (lower is better) Translates to: QDHTRCHLTLTAVFSGSLRNHWS*GAPGAQ Trigger: TTGAGCCCCTGGAGCCCCGCAAGACCAGTGATTCCT...GAGACTTCCAGAAAACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR CCA 90 bp | AGACAAGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTTTCTGGAAGTGTCGGGAGACCAGCCTaGGCTGAGCAAGGTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RQDHTRCHLTLTAVFSGSVGRPA*AEQGPQ Trigger: TTGAGGACCTTGCTCAGCCCAGGCTGGTCTCCCGAC...ACTTCCAGAAAACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR CCA 90 bp | CCAAACTTGGTAAAGACAAGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTCGGGAGACCAGCCTaGGCTGAGCAAGGTCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: PNLVKTRSHTVPSDAHSGVGRPA*AEQGPQ Trigger: TTGAGGACCTTGCTCAGCCCAGGCTGGTCTCCCGAC...ACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCTTTACCAAGTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR TCA 90 bp | GTAAGGTCCCCAAACTTGGTAAAGACAAGATCACACACGGTGCCATCTGACGCTGTTCCGCCAGCTCCTTaGCCCTGTCGGAACAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: VRSPNLVKTRSHTVPSDAVPPAP*PCRNSV Trigger: CACACTGTTCCGACAGGGTCAAGGAGCTGGCGGAAC...AGCGTCAGATGGCACCGTGTGTGATCTTGTCTTTACCAAGTTTGGGGACCTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR GCA 90 bp | GTAAGGTCCCCAAACTTGGTAAAGACAAGATCACACACGGTGCCATCTGACGCTAGGAATCACTGGTCTTaGGGGGCTCCAGGGGCTCAA | + |
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Preference number: 4 (lower is better) Translates to: VRSPNLVKTRSHTVPSDARNHWS*GAPGAQ Trigger: TTGAGCCCCTGGAGCCCCGCAAGACCAGTGATTCCT...AGCGTCAGATGGCACCGTGTGTGATCTTGTCTTTACCAAGTTTGGGGACCTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR CCA 90 bp | AGACAAGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTTTCTGGAAGTGGATCGCTGGAGTTGTaGGATCTGAAGGATGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RQDHTRCHLTLTAVFSGSGSLEL*DLKDAE Trigger: CTCCGCATCCTTCAGATCCCACAACTCCAGCGATCC...ACTTCCAGAAAACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR CCA 90 bp | AAGACAAGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTTTCTGGAAGCTCAGAGAAGCCAGCTaGAGCCGTGGTAGGTATCTG | + |
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Preference number: 4 (lower is better) Translates to: KTRSHTVPSDAHSGVFWKLREAS*SRGRYL Trigger: CAGATACCTACCACGGCTCCAGCTGGCTTCTCTGAG...CTTCCAGAAAACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR TCA 90 bp | CCAAACTTGGTAAAGACAAGATCACACACGGTGCCATCTGACGCTCACAGCGGTTGGAGTTGTGGGATCTaGAGGATGCGGAGACCTCAT | + |
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Preference number: 4 (lower is better) Translates to: PNLVKTRSHTVPSDAHSGWSCGI*RMRRPH Trigger: ATGAGGTCTCCGCATCCTTCAGATCCCACAACTCCA...ACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCTTTACCAAGTTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR TCA 90 bp | AAGACAAGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTTTCTGGAAGTGGAGTTGTGGGATCTaGAGGATGCGGAGACCTCAT | + |
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Preference number: 4 (lower is better) Translates to: KTRSHTVPSDAHSGVFWKWSCGI*RMRRPH Trigger: ATGAGGTCTCCGCATCCTTCAGATCCCACAACTCCA...CTTCCAGAAAACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR GCA 90 bp | CCAAACTTGGTAAAGACAAGATCACACACGGTGCCATCTGACGCTCACAGCGGTGGAGTTCAGAGGTTGTaGGTGTTTCTGTCGTGGTCG | + |
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Preference number: 4 (lower is better) Translates to: PNLVKTRSHTVPSDAHSGGVQRL*VFLSWS Trigger: CGACCACGACAGAAACACGCACAACCTCTGAACTCC...ACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCTTTACCAAGTTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR CCA 90 bp | AGACAAGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTTTCTGGAAGTTTGGAGGAAGGTAGCTaGGATTGGTGCCTTTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RQDHTRCHLTLTAVFSGSLEEGS*DWCLWR Trigger: TCGCCAAAGGCACCAATCCCAGCTACCTTCCTCCAA...ACTTCCAGAAAACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR TCA 90 bp | TTTTATTGCTGGGTAAGGTCCCCAAACTTGGTAAAGACAAGATCACACACGGTGGTTCCGCCAGCTCCTTaGCCCTGTCGGAACAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FYCWVRSPNLVKTRSHTVVPPAP*PCRNSV Trigger: CACACTGTTCCGACAGGGTCAAGGAGCTGGCGGAAC...CACCGTGTGTGATCTTGTCTTTACCAAGTTTGGGGACCTTACCCAGCAATAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR GCA 90 bp | GTAAGGTCCCCAAACTTGGTAAAGACAAGATCACACACGGTGCCATCTGACGCTGGAGTTCAGAGGTTGTaGGTGTTTCTGTCGTGGTCG | + |
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Preference number: 4 (lower is better) Translates to: VRSPNLVKTRSHTVPSDAGVQRL*VFLSWS Trigger: CGACCACGACAGAAACACGCACAACCTCTGAACTCC...AGCGTCAGATGGCACCGTGTGTGATCTTGTCTTTACCAAGTTTGGGGACCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR CCA 90 bp | GTAAGGTCCCCAAACTTGGTAAAGACAAGATCACACACGGTGCCATCTGACGCTTTGGAGGAAGGTAGCTaGGATTGGTGCCTTTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: VRSPNLVKTRSHTVPSDALEEGS*DWCLWR Trigger: TCGCCAAAGGCACCAATCCCAGCTACCTTCCTCCAA...AGCGTCAGATGGCACCGTGTGTGATCTTGTCTTTACCAAGTTTGGGGACCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR TCA 90 bp | CAAGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTTTCTGGAAGTCTCTCAGACTCTGTGCTTTaGATTTGTTGGGTTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QDHTRCHLTLTAVFSGSLSDSVL*ICWVWP Trigger: TGGCCAAACCCAACAAATTCAAAGCACAGAGTCTGA...GAGACTTCCAGAAAACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR TCA 90 bp | AGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTTTCTGGAAGTCTCATTCAGACTCTGTGCTTTaGATTTGTTGGGTTTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: RSHTVPSDAHSGVFWKSHSDSVL*ICWVWP Trigger: TGGCCAAACCCAACAAATTCAAAGCACAGAGTCTGA...ATGAGACTTCCAGAAAACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR GCA 90 bp | AGGTCCCCAAACTTGGTAAAGACAAGATCACACACGGTGCCATCTGACGCTCACTACAATCCTTGGAGTTaGAACAGCACTCAGGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: RSPNLVKTRSHTVPSDAHYNPWS*NSTQGR Trigger: TCTACCCTGAGTGCTGTTGCAACTCCAAGGATTGTA...GTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCTTTACCAAGTTTGGGGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR CCA 90 bp | AAGACAAGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTTTCTGGAAGTCTGGCTATCAAAGATaGGGAGGTCATAATCACTGC | + |
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Preference number: 4 (lower is better) Translates to: KTRSHTVPSDAHSGVFWKSGYQR*GGHNHC Trigger: GCAGTGATTATGACCTCCCCATCTTTGATAGCCAGA...CTTCCAGAAAACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR CCA 90 bp | AGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTTTCTGGAAGTCTCATCAGAAACAGGGCGAATaGGATCTTGATTTCCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: RSHTVPSDAHSGVFWKSHQKQGE*DLDFPK Trigger: TTTGGGGAAATCAAGATCCCATTCGCCCTGTTTCTG...ATGAGACTTCCAGAAAACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR TCA 90 bp | TCAGTAAGATGTAAATACCAAGGCTGGGAACAAAGTTATCTGCCGCACGGTCTAGGGCGAATGGGATCTTaGTTTCCCCAAAACAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: SVRCKYQGWEQSYLPHGLGRMGS*FPQNSL Trigger: GAGGCTGTTTTGGGGAAATCAAGATCCCATTCGCCC...TAGACCGTGCGGCAGATAACTTTGTTCCCAGCCTTGGTATTTACATCTTACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031161.11 |
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| CDS-3UTR GCA 90 bp | AAGACAAGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTTTCTGGAAGGGAGGTCATAATCACTaGGTTGGGAAACAAATCATC | + |
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Preference number: 4 (lower is better) Translates to: KTRSHTVPSDAHSGVFWKGGHNH*VGKQII Trigger: GATGATTTGTTTCCCAACGCAGTGATTATGACCTCC...CTTCCAGAAAACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR GCA 90 bp | GTAAGGTCCCCAAACTTGGTAAAGACAAGATCACACACGGTGCCATCTGACGCTTACAATCCTTGGAGTTaGAACAGCACTCAGGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: VRSPNLVKTRSHTVPSDAYNPWS*NSTQGR Trigger: TCTACCCTGAGTGCTGTTGCAACTCCAAGGATTGTA...AGCGTCAGATGGCACCGTGTGTGATCTTGTCTTTACCAAGTTTGGGGACCTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR CCA 90 bp | TTTTTATTGCTGGGTAAGGTCCCCAAACTTGGTAAAGACAAGATCACACACGGTGGATCGCTGGAGTTGTaGGATCTGAAGGATGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: FLLLGKVPKLGKDKITHGGSLEL*DLKDAE Trigger: CTCCGCATCCTTCAGATCCCACAACTCCAGCGATCC...ACCGTGTGTGATCTTGTCTTTACCAAGTTTGGGGACCTTACCCAGCAATAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR CCA 90 bp | GTAAGGTCCCCAAACTTGGTAAAGACAAGATCACACACGGTGCCATCTGACGCTTCTGGCTATCAAAGATaGGGAGGTCATAATCACTGC | + |
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Preference number: 4 (lower is better) Translates to: VRSPNLVKTRSHTVPSDASGYQR*GGHNHC Trigger: GCAGTGATTATGACCTCCCCATCTTTGATAGCCAGA...AGCGTCAGATGGCACCGTGTGTGATCTTGTCTTTACCAAGTTTGGGGACCTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR CCA 90 bp | AACTTGGTAAAGACAAGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTCAGAAACAGGGCGAATaGGATCTTGATTTCCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: NLVKTRSHTVPSDAHSGVQKQGE*DLDFPK Trigger: TTTGGGGAAATCAAGATCCCATTCGCCCTGTTTCTG...AACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCTTTACCAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR CCA 90 bp | AGGTCCCCAAACTTGGTAAAGACAAGATCACACACGGTGCCATCTGACGCTCACATCTTAATCCTTGGGTaGGCAAGGTCTACAATCCTT | + |
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Preference number: 4 (lower is better) Translates to: RSPNLVKTRSHTVPSDAHILILG*ARSTIL Trigger: AAGGATTGTAGACCTTGCCCACCCAAGGATTAAGAT...GTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCTTTACCAAGTTTGGGGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR CCA 90 bp | AACTTGGTAAAGACAAGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTATCTTAATCCTTGGGTaGGCAAGGTCTACAATCCTT | + |
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Preference number: 4 (lower is better) Translates to: NLVKTRSHTVPSDAHSGVILILG*ARSTIL Trigger: AAGGATTGTAGACCTTGCCCACCCAAGGATTAAGAT...AACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCTTTACCAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR GCA 90 bp | TTTTTATTGCTGGGTAAGGTCCCCAAACTTGGTAAAGACAAGATCACACACGGTGTGGGATCTGAAGGATaGGGAGACCTCATGGGATTT | + |
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Preference number: 4 (lower is better) Translates to: FLLLGKVPKLGKDKITHGVGSEG*GDLMGF Trigger: AAATCCCATGAGGTCTCCGCATCCTTCAGATCCCAC...ACCGTGTGTGATCTTGTCTTTACCAAGTTTGGGGACCTTACCCAGCAATAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR GCA 90 bp | AAGACAAGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTTTCTGGAAGCTTTATCAGACTCTGTaGTTTGAATTTGTTGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: KTRSHTVPSDAHSGVFWKLYQTL*FEFVGF Trigger: AAACCCAACAAATTCAAAGCACAGAGTCTGATAAAG...CTTCCAGAAAACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR GCA 90 bp | AGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTTTCTGGAAGTCTCATCTTTATCAGACTCTGTaGTTTGAATTTGTTGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: RSHTVPSDAHSGVFWKSHLYQTL*FEFVGF Trigger: AAACCCAACAAATTCAAAGCACAGAGTCTGATAAAG...ATGAGACTTCCAGAAAACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR GCA 90 bp | TTTTATTGCTGGGTAAGGTCCCCAAACTTGGTAAAGACAAGATCACACACGGTGGGAGGTCATAATCACTaGGTTGGGAAACAAATCATC | + |
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Preference number: 4 (lower is better) Translates to: FYCWVRSPNLVKTRSHTVGGHNH*VGKQII Trigger: GATGATTTGTTTCCCAACGCAGTGATTATGACCTCC...CACCGTGTGTGATCTTGTCTTTACCAAGTTTGGGGACCTTACCCAGCAATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS GCA 90 bp | TCTTCTTGTCCTTCCTCCCCAACCGCTTCGGCCTCGTCACCATTCTaGACCTCCAGGAGCCTGAGCACAAGGGGCTTCGGTTGGAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: SSCPSSPTASASSPF*TSRSLSTRGFGWSS Trigger: TGAACTCCAACCGAAGCCCCTTGTGCTCAGGCTCCTGGAGGTGCAGAATGGTGACGAGGCCGAAGCGGTTGGGGAGGAAGGACAAGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR CAA 90 bp | CAAGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTTTCTGGAAGTCTCAGGGAATCACTGGCCTaGCGGGACTGGGGAGGATCG | + |
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Preference number: 5 (lower is better) Translates to: QDHTRCHLTLTAVFSGSLRESLA*RDWGGS Trigger: CGATCCTCCCCAGTCCCGCAAGGCCAGTGATTCCCT...GAGACTTCCAGAAAACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS CCA 90 bp | TCACCATTCTGCACCTCCAGGAGCCTGAGCACAAGGGGCTTCGGTTaGAGTTCAGAGGTTGTGCGTGTTTCTGTCGTGGTCGTGGTGTTC | + |
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Preference number: 5 (lower is better) Translates to: SPFCTSRSLSTRGFG*SSEVVRVSVVVVVF Trigger: GAACACCACGACCACGACAGAAACACGCACAACCTCTGAACTCCAACCGAAGCCCCTTGTGCTCAGGCTCCTGGAGGTGCAGAATGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR CAA 90 bp | AAGACAAGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTTTCTGGAAGAGGGAATCACTGGCCTaGCGGGACTGGGGAGGATCG | + |
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Preference number: 5 (lower is better) Translates to: KTRSHTVPSDAHSGVFWKRESLA*RDWGGS Trigger: CGATCCTCCCCAGTCCCGCAAGGCCAGTGATTCCCT...CTTCCAGAAAACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS CCA 90 bp | CCAAGGTCTTTGGAGGAAGGTAGCTGGGATTGGTGCCTTTGGCGATaGAGAGTCGCAGAATCCGGGGAGAAGGATCAGAGTAACGAGTGG | + |
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Preference number: 5 (lower is better) Translates to: PRSLEEGSWDWCLWR*RVAESGEKDQSNEW Trigger: CCACTCGTTACTCTGATCCTTCTCCCCGGATTCTGCGACTCTCCATCGCCAAAGGCACCAATCCCAGCTACCTTCCTCCAAAGACCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS CCA 90 bp | TGGTTTCCAAGGTCTTTGGAGGAAGGTAGCTGGGATTGGTGCCTTTaGCGATGGAGAGTCGCAGAATCCGGGGAGAAGGATCAGAGTAAC | + |
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Preference number: 5 (lower is better) Translates to: WFPRSLEEGSWDWCL*RWRVAESGEKDQSN Trigger: GTTACTCTGATCCTTCTCCCCGGATTCTGCGACTCTCCATCGCCAAAGGCACCAATCCCAGCTACCTTCCTCCAAAGACCTTGGAAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR CAA 90 bp | AAGACAAGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTTTCTGGAAGTTCGTAGTCCTCTTCTaGTCCTTCCTCCCCAACCGC | + |
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Preference number: 5 (lower is better) Translates to: KTRSHTVPSDAHSGVFWKFVVLF*SFLPNR Trigger: GCGGTTGGGGAGGAAGGACAAGAAGAGGACTACGAA...CTTCCAGAAAACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS-3UTR CAA 90 bp | AGGTCCCCAAACTTGGTAAAGACAAGATCACACACGGTGCCATCTGACGCTCACTTCGTAGTCCTCTTCTaGTCCTTCCTCCCCAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: RSPNLVKTRSHTVPSDAHFVVLF*SFLPNR Trigger: GCGGTTGGGGAGGAAGGACAAGAAGAGGACTACGAA...GTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCTTTACCAAGTTTGGGGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS TCA 90 bp | TTGGGAAACAAATCATCTTTTCCATCCTCCTGGCGCTCGGATGACTaGAGGGGATCACTGCCCATTAGGGACCGGAAGGAATCACTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LGNKSSFPSSWRSDD*RGSLPIRDRKESLV Trigger: GACCAGTGATTCCTTCCGGTCCCTAATGGGCAGTGATCCCCTTCAGTCATCCGAGCGCCAGGAGGATGGAAAAGATGATTTGTTTCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS GCA 90 bp | AAATCTTGGTTTCCAAGGTCTTTGGAGGAAGGTAGCTGGGATTGGTaGCTTTGGCGATGGAGAGTCGCAGAATCCGGGGAGAAGGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: KSWFPRSLEEGSWDW*LWRWRVAESGEKDQ Trigger: CTGATCCTTCTCCCCGGATTCTGCGACTCTCCATCGCCAAAGGCACCAATCCCAGCTACCTTCCTCCAAAGACCTTGGAAACCAAGATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS CCA 90 bp | AGGAAATCTTGGTTTCCAAGGTCTTTGGAGGAAGGTAGCTGGGATTaGTGCCTTTGGCGATGGAGAGTCGCAGAATCCGGGGAGAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RKSWFPRSLEEGSWD*CLWRWRVAESGEKD Trigger: ATCCTTCTCCCCGGATTCTGCGACTCTCCATCGCCAAAGGCACCAATCCCAGCTACCTTCCTCCAAAGACCTTGGAAACCAAGATTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS CCA 90 bp | TTTATCAGACTCTGTGCTTTGAATTTGTTGGGTTTGGCCAGCTTCTaGATCCGTTTGGAAGGCCGGGTAACCAGCGCAGGAGGAGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: FIRLCALNLLGLASF*IRLEGRVTSAGGEI Trigger: GATCTCTCCTCCTGCGCTGGTTACCCGGCCTTCCAAACGGATCCAGAAGCTGGCCAAACCCAACAAATTCAAAGCACAGAGTCTGATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS-3UTR CAA 90 bp | AGACAAGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTTTCTGGAAGTGTCCGGAGTTCCCCATaGCTTTTTCGGTTTAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RQDHTRCHLTLTAVFSGSVRSSP*LFRFRK Trigger: CTTTCTAAACCGAAAAAGCAATGGGGAACTCCGGAC...ACTTCCAGAAAACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS-3UTR CAA 90 bp | GTAAGGTCCCCAAACTTGGTAAAGACAAGATCACACACGGTGCCATCTGACGCTTGTGCTTTGAATTTGTaGGGTTTGGCCAGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VRSPNLVKTRSHTVPSDACALNL*GLASFW Trigger: CCAGAAGCTGGCCAAACCCAACAAATTCAAAGCACA...AGCGTCAGATGGCACCGTGTGTGATCTTGTCTTTACCAAGTTTGGGGACCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS-3UTR CAA 90 bp | AACTTGGTAAAGACAAGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTTGTGCTTTGAATTTGTaGGGTTTGGCCAGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NLVKTRSHTVPSDAHSGVCALNL*GLASFW Trigger: CCAGAAGCTGGCCAAACCCAACAAATTCAAAGCACA...AACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCTTTACCAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS-3UTR CAA 90 bp | AGGTCCCCAAACTTGGTAAAGACAAGATCACACACGGTGCCATCTGACGCTCACATCAGACTCTGTGCTTaGAATTTGTTGGGTTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSPNLVKTRSHTVPSDAHIRLCA*NLLGLA Trigger: GGCCAAACCCAACAAATTCAAAGCACAGAGTCTGAT...GTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCTTTACCAAGTTTGGGGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS-3UTR CAA 90 bp | AAGACAAGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTTTCTGGAAGATCAGACTCTGTGCTTaGAATTTGTTGGGTTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KTRSHTVPSDAHSGVFWKIRLCA*NLLGLA Trigger: GGCCAAACCCAACAAATTCAAAGCACAGAGTCTGAT...CTTCCAGAAAACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS CCA 90 bp | GAGTCGCAGAATCCGGGGAGAAGGATCAGAGTAACGAGTGGTGCCTaGTACGGTTTCTCTCTTTATCAGACTCTGTGCTTTGAATTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ESQNPGRRIRVTSGA*YGFSLYQTLCFEFV Trigger: AACAAATTCAAAGCACAGAGTCTGATAAAGAGAGAAACCGTACCAGGCACCACTCGTTACTCTGATCCTTCTCCCCGGATTCTGCGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS-3UTR CAA 90 bp | AGACAAGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTTTCTGGAAGTGTAGAGAAGGAAATCTaGGTTTCCAAGGTCTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RQDHTRCHLTLTAVFSGSVEKEI*VSKVFG Trigger: TCCAAAGACCTTGGAAACCAAGATTTCCTTCTCTAC...ACTTCCAGAAAACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCTTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS-3UTR CAA 90 bp | AGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTTTCTGGAAGTCTCATGTAGAGAAGGAAATCTaGGTTTCCAAGGTCTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RSHTVPSDAHSGVFWKSHVEKEI*VSKVFG Trigger: TCCAAAGACCTTGGAAACCAAGATTTCCTTCTCTAC...ATGAGACTTCCAGAAAACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS GCA 90 bp | CTCTATCTTAATCCTTGGGTGGGCAAGGTCTACAATCCTTGGAGTTaGAACAGCACTCAGGGTAGAGAAGGAAATCTTGGTTTCCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LYLNPWVGKVYNPWS*NSTQGREGNLGFQG Trigger: ACCTTGGAAACCAAGATTTCCTTCTCTACCCTGAGTGCTGTTGCAACTCCAAGGATTGTAGACCTTGCCCACCCAAGGATTAAGATAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS-3UTR CAA 90 bp | AGATCACACACGGTGCCATCTGACGCTCACAGCGGTGTTTTCTGGAAGTCTCATTTTAAAGCAGAAGGCTaGACTTTAAAGACGTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RSHTVPSDAHSGVFWKSHFKAEG*TLKTFG Trigger: CCCAAACGTCTTTAAAGTCAAGCCTTCTGCTTTAAA...ATGAGACTTCCAGAAAACACCGCTGTGAGCGTCAGATGGCACCGTGTGTGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS-3UTR CAA 90 bp | TTTTATTGCTGGGTAAGGTCCCCAAACTTGGTAAAGACAAGATCACACACGGTGCTCTGTGCTTTGAATTaGTTGGGTTTGGCCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FYCWVRSPNLVKTRSHTVLCALN*LGLASF Trigger: GAAGCTGGCCAAACCCAACAAATTCAAAGCACAGAG...CACCGTGTGTGATCTTGTCTTTACCAAGTTTGGGGACCTTACCCAGCAATAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS-3UTR CAA 90 bp | GTAAGGTCCCCAAACTTGGTAAAGACAAGATCACACACGGTGCCATCTGACGCTGAACACGCTTGGACTTaGCTAGAAATATCGTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VRSPNLVKTRSHTVPSDAEHAWT*LEISFF Trigger: AAAGAACGATATTTCTAGCAAAGTCCAAGCGTGTTC...AGCGTCAGATGGCACCGTGTGTGATCTTGTCTTTACCAAGTTTGGGGACCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS-3UTR CAA 90 bp | TTTTTATTGCTGGGTAAGGTCCCCAAACTTGGTAAAGACAAGATCACACACGGTCTCTGTGCTTTGAATTaGTTGGGTTTGGCCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLLLGKVPKLGKDKITHGLCALN*LGLASF Trigger: GAAGCTGGCCAAACCCAACAAATTCAAAGCACAGAG...ACCGTGTGTGATCTTGTCTTTACCAAGTTTGGGGACCTTACCCAGCAATAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS-3UTR CAA 90 bp | TTTTATTGCTGGGTAAGGTCCCCAAACTTGGTAAAGACAAGATCACACACGGTGGAACACGCTTGGACTTaGCTAGAAATATCGTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FYCWVRSPNLVKTRSHTVEHAWT*LEISFF Trigger: AAAGAACGATATTTCTAGCAAAGTCCAAGCGTGTTC...CACCGTGTGTGATCTTGTCTTTACCAAGTTTGGGGACCTTACCCAGCAATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS-3UTR CAA 90 bp | TTTTTATTGCTGGGTAAGGTCCCCAAACTTGGTAAAGACAAGATCACACACGGTTTTAAAGCAGAAGGCTaGACTTTAAAGACGTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FLLLGKVPKLGKDKITHGFKAEG*TLKTFG Trigger: CCCAAACGTCTTTAAAGTCAAGCCTTCTGCTTTAAA...ACCGTGTGTGATCTTGTCTTTACCAAGTTTGGGGACCTTACCCAGCAATAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS GCA 72 bp | CAATGCCCTTGCGAGACCGGAGGGAATCACTGGCCTTaGGGGACTGGGGAGGATCGCTGGAGTTGTGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: QCPCETGGNHWP*GTGEDRWSCGI Trigger: GATCCCACAACTCCAGCGATCCTCCCCAGTCCCGCAAGGCCAGTGATTCCCTCCGGTCTCGCAAGGGCATTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS GCA 72 bp | CACTGCCCATTAGGGACCGGAAGGAATCACTGGTCTTaGGGGGCTCCAGGGGCTCAATGCCCTTGCGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: HCPLGTGRNHWS*GAPGAQCPCET Trigger: GGTCTCGCAAGGGCATTGAGCCCCTGGAGCCCCGCAAGACCAGTGATTCCTTCCGGTCCCTAATGGGCAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS TCA 72 bp | CTTCGGCCTCGTCACCATTCTGCACCTCCAGGAGCCTaGGCACAAGGGGCTTCGGTTGGAGTTCAGAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LRPRHHSAPPGA*AQGASVGVQRL Trigger: CAACCTCTGAACTCCAACCGAAGCCCCTTGTGCTCAGGCTCCTGGAGGTGCAGAATGGTGACGAGGCCGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS CCA 72 bp | CTGGCCTTGCGGGACTGGGGAGGATCGCTGGAGTTGTaGGATCTGAAGGATGCGGAGACCTCATGGGATTTG | + |
|
Preference number: 6 (lower is better) Translates to: LALRDWGGSLEL*DLKDAETSWDL Trigger: CAAATCCCATGAGGTCTCCGCATCCTTCAGATCCCACAACTCCAGCGATCCTCCCCAGTCCCGCAAGGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS CAA 72 bp | TCACTGGCCTTGCGGGACTGGGGAGGATCGCTGGAGTaGTGGGATCTGAAGGATGCGGAGACCTCATGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SLALRDWGGSLE*WDLKDAETSWD Trigger: ATCCCATGAGGTCTCCGCATCCTTCAGATCCCACAACTCCAGCGATCCTCCCCAGTCCCGCAAGGCCAGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS CAA 90 bp | GTCACCATTCTGCACCTCCAGGAGCCTGAGCACAAGGGGCTTCGGTaGGAGTTCAGAGGTTGTGCGTGTTTCTGTCGTGGTCGTGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: VTILHLQEPEHKGLR*EFRGCACFCRGRGV Trigger: AACACCACGACCACGACAGAAACACGCACAACCTCTGAACTCCAACCGAAGCCCCTTGTGCTCAGGCTCCTGGAGGTGCAGAATGGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS GCA 72 bp | TTTCCAAGGTCTTTGGAGGAAGGTAGCTGGGATTGGTaGCTTTGGCGATGGAGAGTCGCAGAATCCGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: FPRSLEEGSWDW*LWRWRVAESGE Trigger: CTCCCCGGATTCTGCGACTCTCCATCGCCAAAGGCACCAATCCCAGCTACCTTCCTCCAAAGACCTTGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS CCA 72 bp | TCACGGGTAACTGGGTGTGCTCTCAGAGAAGCCAGCTaGAGCCGTGGTAGGTATCTGGCTATCAAAGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: SRVTGCALREAS*SRGRYLAIKDG Trigger: CCCATCTTTGATAGCCAGATACCTACCACGGCTCCAGCTGGCTTCTCTGAGAGCACACCCAGTTACCCGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS CCA 72 bp | TTGGAGGAAGGTAGCTGGGATTGGTGCCTTTGGCGATaGAGAGTCGCAGAATCCGGGGAGAAGGATCAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LEEGSWDWCLWR*RVAESGEKDQS Trigger: ACTCTGATCCTTCTCCCCGGATTCTGCGACTCTCCATCGCCAAAGGCACCAATCCCAGCTACCTTCCTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS CCA 72 bp | AGGTCTTTGGAGGAAGGTAGCTGGGATTGGTGCCTTTaGCGATGGAGAGTCGCAGAATCCGGGGAGAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: RSLEEGSWDWCL*RWRVAESGEKD Trigger: ATCCTTCTCCCCGGATTCTGCGACTCTCCATCGCCAAAGGCACCAATCCCAGCTACCTTCCTCCAAAGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS CCA 72 bp | TGGTTTCCAAGGTCTTTGGAGGAAGGTAGCTGGGATTaGTGCCTTTGGCGATGGAGAGTCGCAGAATCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: WFPRSLEEGSWD*CLWRWRVAESG Trigger: CCCGGATTCTGCGACTCTCCATCGCCAAAGGCACCAATCCCAGCTACCTTCCTCCAAAGACCTTGGAAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS GCA 72 bp | GCAGAATCCGGGGAGAAGGATCAGAGTAACGAGTGGTaGCTGGTACGGTTTCTCTCTTTATCAGACTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: AESGEKDQSNEW*LVRFLSLSDSV Trigger: CACAGAGTCTGATAAAGAGAGAAACCGTACCAGGCACCACTCGTTACTCTGATCCTTCTCCCCGGATTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS CCA 72 bp | GTCGCAGAATCCGGGGAGAAGGATCAGAGTAACGAGTaGTGCCTGGTACGGTTTCTCTCTTTATCAGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: VAESGEKDQSNE*CLVRFLSLSDS Trigger: AGAGTCTGATAAAGAGAGAAACCGTACCAGGCACCACTCGTTACTCTGATCCTTCTCCCCGGATTCTGCGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS CCA 72 bp | CTGGGTGTGCGGCTTGTGGACTTTGCTGAGCAGGTCTaGGTGAATGACGTCTTGGTCTTCTATTTTTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LGVRLVDFAEQV*VNDVLVFYFCL Trigger: AAGGCAAAAATAGAAGACCAAGACGTCATTCACCCAGACCTGCTCAGCAAAGTCCACAAGCCGCACACCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118941.2 |
||
| CDS CAA 90 bp | ACGGTTTCTCTCTTTATCAGACTCTGTGCTTTGAATTTGTTGGGTTaGGCCAGCTTCTGGATCCGTTTGGAAGGCCGGGTAACCAGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: TVSLFIRLCALNLLG*ASFWIRLEGRVTSA Trigger: TGCGCTGGTTACCCGGCCTTCCAAACGGATCCAGAAGCTGGCCAAACCCAACAAATTCAAAGCACAGAGTCTGATAAAGAGAGAAACCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS CAA 90 bp | CCTGGTACGGTTTCTCTCTTTATCAGACTCTGTGCTTTGAATTTGTaGGGTTTGGCCAGCTTCTGGATCCGTTTGGAAGGCCGGGTAACC | + |
|
Preference number: 6 (lower is better) Translates to: PGTVSLFIRLCALNL*GLASFWIRLEGRVT Trigger: GGTTACCCGGCCTTCCAAACGGATCCAGAAGCTGGCCAAACCCAACAAATTCAAAGCACAGAGTCTGATAAAGAGAGAAACCGTACCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS CAA 90 bp | GTGCCTGGTACGGTTTCTCTCTTTATCAGACTCTGTGCTTTGAATTaGTTGGGTTTGGCCAGCTTCTGGATCCGTTTGGAAGGCCGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: VPGTVSLFIRLCALN*LGLASFWIRLEGRV Trigger: TACCCGGCCTTCCAAACGGATCCAGAAGCTGGCCAAACCCAACAAATTCAAAGCACAGAGTCTGATAAAGAGAGAAACCGTACCAGGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS CAA 90 bp | CGAGTGGTGCCTGGTACGGTTTCTCTCTTTATCAGACTCTGTGCTTaGAATTTGTTGGGTTTGGCCAGCTTCTGGATCCGTTTGGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RVVPGTVSLFIRLCA*NLLGLASFWIRLEG Trigger: GCCTTCCAAACGGATCCAGAAGCTGGCCAAACCCAACAAATTCAAAGCACAGAGTCTGATAAAGAGAGAAACCGTACCAGGCACCACTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS CAA 90 bp | GGTAGGTATCTGGCTATCAAAGATGGGGAGGTCATAATCACTGCGTaGGGAAACAAATCATCTTTTCCATCCTCCTGGCGCTCGGATGAC | + |
|
Preference number: 6 (lower is better) Translates to: GRYLAIKDGEVIITA*GNKSSFPSSWRSDD Trigger: GTCATCCGAGCGCCAGGAGGATGGAAAAGATGATTTGTTTCCCAACGCAGTGATTATGACCTCCCCATCTTTGATAGCCAGATACCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS CCA 72 bp | AGAATAAAAACATTTCTTTACAAGGTCACGGGTAACTaGGTGTGCTCTCAGAGAAGCCAGCTGGAGCCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RIKTFLYKVTGN*VCSQRSQLEPW Trigger: CCACGGCTCCAGCTGGCTTCTCTGAGAGCACACCCAGTTACCCGTGACCTTGTAAAGAAATGTTTTTATTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS CCA 72 bp | AATCCGGGGAGAAGGATCAGAGTAACGAGTGGTGCCTaGTACGGTTTCTCTCTTTATCAGACTCTGTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: NPGRRIRVTSGA*YGFSLYQTLCF Trigger: AAAGCACAGAGTCTGATAAAGAGAGAAACCGTACCAGGCACCACTCGTTACTCTGATCCTTCTCCCCGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS CAA 72 bp | CTGGCTATCAAAGATGGGGAGGTCATAATCACTGCGTaGGGAAACAAATCATCTTTTCCATCCTCCTGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LAIKDGEVIITA*GNKSSFPSSWR Trigger: GCGCCAGGAGGATGGAAAAGATGATTTGTTTCCCAACGCAGTGATTATGACCTCCCCATCTTTGATAGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS CAA 72 bp | CTCTTTATCAGACTCTGTGCTTTGAATTTGTTGGGTTaGGCCAGCTTCTGGATCCGTTTGGAAGGCCGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LFIRLCALNLLG*ASFWIRLEGRV Trigger: TACCCGGCCTTCCAAACGGATCCAGAAGCTGGCCAAACCCAACAAATTCAAAGCACAGAGTCTGATAAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS CAA 90 bp | AGAGATCTCCCAGATAACAGACTCTCTTCCGCAGCTGTAGTAATATaGAATTCTGTTAGGGACATAATGTCGGGAGACCAGCCTGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RDLPDNRLSSAAVVI*NSVRDIMSGDQPGL Trigger: CAGCCCAGGCTGGTCTCCCGACATTATGTCCCTAACAGAATTCAATATTACTACAGCTGCGGAAGAGAGTCTGTTATCTGGGAGATCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS CAA 72 bp | CCTGGTACGGTTTCTCTCTTTATCAGACTCTGTGCTTaGAATTTGTTGGGTTTGGCCAGCTTCTGGATCCGT | + |
|
Preference number: 6 (lower is better) Translates to: PGTVSLFIRLCA*NLLGLASFWIR Trigger: ACGGATCCAGAAGCTGGCCAAACCCAACAAATTCAAAGCACAGAGTCTGATAAAGAGAGAAACCGTACCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
||
| CDS CCA 72 bp | TATCTTAATCCTTGGGTGGGCAAGGTCTACAATCCTTaGAGTTGCAACAGCACTCAGGGTAGAGAAGGAAAT | + |
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Preference number: 6 (lower is better) Translates to: YLNPWVGKVYNP*SCNSTQGREGN Trigger: ATTTCCTTCTCTACCCTGAGTGCTGTTGCAACTCCAAGGATTGTAGACCTTGCCCACCCAAGGATTAAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS GCA 72 bp | GTATCTGGCTATCAAAGATGGGGAGGTCATAATCACTaGGTTGGGAAACAAATCATCTTTTCCATCCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: VSGYQRWGGHNH*VGKQIIFSILL Trigger: CAGGAGGATGGAAAAGATGATTTGTTTCCCAACGCAGTGATTATGACCTCCCCATCTTTGATAGCCAGATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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| CDS CAA 72 bp | ACGGTTTCTCTCTTTATCAGACTCTGTGCTTTGAATTaGTTGGGTTTGGCCAGCTTCTGGATCCGTTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: TVSLFIRLCALN*LGLASFWIRLE Trigger: TTCCAAACGGATCCAGAAGCTGGCCAAACCCAACAAATTCAAAGCACAGAGTCTGATAAAGAGAGAAACCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031161.11 ENSMUST00000117880.8 |
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