Pregenerated sensors for THEG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020317Ensembl transcript IDs: ENSMUST00000020566.7, ENSMUST00000077433.13
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TTGTTCTGGCCTCTGGCATCCCCGCCCGCCCGCCCCTGCCCAAGCCACGAAGCTGCACACAGGCGAGGATaGACTTGGTGTTTACTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LFWPLASPPARPCPSHEAAHRRG*TWCLLG Trigger: CCCCAGTAAACACCAAGTGCATCCTCGCCTGTGTGC...AGCTTCGTGGCTTGGGCAGGGGCGGGCGGGCGGGGATGCCAGAGGCCAGAACAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| 3UTR GCA 72 bp | TTGTTCTGGCCTCTGGCATCCCCGCCCGCCCGCCCCTaGCCAAGCCACGAAGCTCATCGATTCACGCACACA | + |
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Preference number: 3 (lower is better) Translates to: LFWPLASPPARP*PSHEAHRFTHT Trigger: TGTGTGCGTGAATCGATGAGCTTCGTGGCTTGGGCAGGGGCGGGCGGGCGGGGATGCCAGAGGCCAGAACAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR TCA 90 bp | CCTCTGGCATCCCCGCCCGCCCGCCCCTGCCCAAGCCACGAAGCTCATCGATTCGCTGGGCCAGGGAGATaGTCCGTGAACTGGCCACCG | + |
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Preference number: 4 (lower is better) Translates to: PLASPPARPCPSHEAHRFAGPGR*SVNWPP Trigger: CGGTGGCCAGTTCACGGATCATCTCCCTGGCCCAGC...GAATCGATGAGCTTCGTGGCTTGGGCAGGGGCGGGCGGGCGGGGATGCCAGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR TCA 90 bp | TTGTTCTGGCCTCTGGCATCCCCGCCCGCCCGCCCCTGCCCAAGCCACGAAGCTATTCGAGGAGATGCCTaGGCCACCAGAGAGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LFWPLASPPARPCPSHEAIRGDA*ATREAG Trigger: CCCAGCCTCTCTGGTGGCTCAGGCATCTCCTCGAAT...AGCTTCGTGGCTTGGGCAGGGGCGGGCGGGCGGGGATGCCAGAGGCCAGAACAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR CCA 90 bp | GCATCCCCGCCCGCCCGCCCCTGCCCAAGCCACGAAGCTCATCGATTCACGCACGTCGGGACTGCCATCTaGGCTGCTCTGGAGACTTGG | + |
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Preference number: 4 (lower is better) Translates to: ASPPARPCPSHEAHRFTHVGTAI*AALETW Trigger: CCAAGTCTCCAGAGCAGCCCAGATGGCAGTCCCGAC...GTGCGTGAATCGATGAGCTTCGTGGCTTGGGCAGGGGCGGGCGGGCGGGGATGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR TCA 90 bp | CCCGCCCGCCCGCCCCTGCCCAAGCCACGAAGCTCATCGATTCACGCACACAGGCAGGGAGATGATCCGTaGACTGGCCACCGCGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: PARPPLPKPRSSSIHAHRQGDDP*TGHRVL Trigger: AAGAACGCGGTGGCCAGTTCACGGATCATCTCCCTG...CCTGTGTGCGTGAATCGATGAGCTTCGTGGCTTGGGCAGGGGCGGGCGGGCGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR GCA 90 bp | TGGCATCCCCGCCCGCCCGCCCCTGCCCAAGCCACGAAGCTCATCGATTCACGCGACTGCCATCTGGGCTaGTCTGGAGACTTGGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: WHPRPPAPAQATKLIDSRDCHLG*SGDLGN Trigger: GTTTCCCAAGTCTCCAGAGCAGCCCAGATGGCAGTC...GCGTGAATCGATGAGCTTCGTGGCTTGGGCAGGGGCGGGCGGGCGGGGATGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR CCA 90 bp | TTGTTCTGGCCTCTGGCATCCCCGCCCGCCCGCCCCTGCCCAAGCCACGAAGCTCCATCTGGGCTGCTCTaGAGACTTGGGAAACCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFWPLASPPARPCPSHEAPSGLL*RLGKPQ Trigger: CTGAGGTTTCCCAAGTCTCCAGAGCAGCCCAGATGG...AGCTTCGTGGCTTGGGCAGGGGCGGGCGGGCGGGGATGCCAGAGGCCAGAACAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR CCA 90 bp | GCCCGCCCGCCCCTGCCCAAGCCACGAAGCTCATCGATTCACGCACACAGGCGAACTCTTCCAACAGAGTaGCTGGGGGCCTGGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: ARPPLPKPRSSSIHAHRRTLPTE*LGAWAL Trigger: CAAAGCCCAGGCCCCCAGCCACTCTGTTGGAAGAGT...TCGCCTGTGTGCGTGAATCGATGAGCTTCGTGGCTTGGGCAGGGGCGGGCGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR TCA 90 bp | CATTATTATTGTTCTGGCCTCTGGCATCCCCGCCCGCCCGCCCCTGCCCAAGCCCCACCGCGTTCTTGGTaGCATCCAGGACCTCCCACT | + |
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Preference number: 4 (lower is better) Translates to: HYYCSGLWHPRPPAPAQAPPRSW*HPGPPT Trigger: AGTGGGAGGTCCTGGATGTCACCAAGAACGCGGTGG...GGCTTGGGCAGGGGCGGGCGGGCGGGGATGCCAGAGGCCAGAACAATAATAATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR TCA 90 bp | TTGTTCTGGCCTCTGGCATCCCCGCCCGCCCGCCCCTGCCCAAGCCACGAAGCTACCTCCAGGTCTTGTTaGAGAGGACCATCCAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: LFWPLASPPARPCPSHEATSRSC*RGPSRL Trigger: CAATCTGGATGGTCCTCTTCAACAAGACCTGGAGGT...AGCTTCGTGGCTTGGGCAGGGGCGGGCGGGCGGGGATGCCAGAGGCCAGAACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR CCA 90 bp | TCTGGCATCCCCGCCCGCCCGCCCCTGCCCAAGCCACGAAGCTCATCGATTCACTCTTTTTCCTGCCCTTaGCTGTGGAGACACTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: SGIPARPPLPKPRSSSIHSFSCP*LWRHWE Trigger: CTCCCAGTGTCTCCACAGCCAAGGGCAGGAAAAAGA...GTGAATCGATGAGCTTCGTGGCTTGGGCAGGGGCGGGCGGGCGGGGATGCCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR CCA 90 bp | GCCTCTGGCATCCCCGCCCGCCCGCCCCTGCCCAAGCCACGAAGCTCATCGATTTTTCGAATTTTGGGCTaGGCCAGGGAGATGATCCGT | + |
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Preference number: 4 (lower is better) Translates to: ASGIPARPPLPKPRSSSIFRILG*AREMIR Trigger: ACGGATCATCTCCCTGGCCCAGCCCAAAATTCGAAA...AATCGATGAGCTTCGTGGCTTGGGCAGGGGCGGGCGGGCGGGGATGCCAGAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR GCA 90 bp | CGCCCGCCCGCCCCTGCCCAAGCCACGAAGCTCATCGATTCACGCACACAGGCGCTGTCTCTCAGACATTaGCAGTTGGTCTTAGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: RPPAPAQATKLIDSRTQALSLRH*QLVLGF Trigger: GAAGCCTAAGACCAACTGGCAATGTCTGAGAGACAG...CGCCTGTGTGCGTGAATCGATGAGCTTCGTGGCTTGGGCAGGGGCGGGCGGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR GCA 90 bp | GCCCGCCCGCCCCTGCCCAAGCCACGAAGCTCATCGATTCACGCACACAGGCGAATAAATTCGAGGAGATaGCTGAGCCACCAGAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: ARPPLPKPRSSSIHAHRRINSRR*LSHQRG Trigger: GCCTCTCTGGTGGCTCAGGCATCTCCTCGAATTTAT...TCGCCTGTGTGCGTGAATCGATGAGCTTCGTGGCTTGGGCAGGGGCGGGCGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR CCA 90 bp | CGCCCGCCCGCCCCTGCCCAAGCCACGAAGCTCATCGATTCACGCACACAGGCGGCTGCTCTGGAGACTTaGGAAACCTCAGACATGTTA | + |
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Preference number: 4 (lower is better) Translates to: RPPAPAQATKLIDSRTQAAALET*ETSDML Trigger: TAACATGTCTGAGGTTTCCCAAGTCTCCAGAGCAGC...CGCCTGTGTGCGTGAATCGATGAGCTTCGTGGCTTGGGCAGGGGCGGGCGGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR CCA 90 bp | TCTGGCATCCCCGCCCGCCCGCCCCTGCCCAAGCCACGAAGCTCATCGATTCACGTAAGGCTTGGGTTTTaGCATAGGGTCCCACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGIPARPPLPKPRSSSIHVRLGF*HRVPLF Trigger: GAAGAGTGGGACCCTATGCCAAAACCCAAGCCTTAC...GTGAATCGATGAGCTTCGTGGCTTGGGCAGGGGCGGGCGGGCGGGGATGCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR CCA 90 bp | CGCACACAGGCGAGGATGCACTTGGTGTTTACTGGGGGTGAGCTGGAGAGAAGGTTCCAACAGAGTGGCTaGGGGCCTGGGCTTTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: RTQARMHLVFTGGELERRFQQSG*GPGLCQ Trigger: CTGGCAAAGCCCAGGCCCCCAGCCACTCTGTTGGAA...CCTTCTCTCCAGCTCACCCCCAGTAAACACCAAGTGCATCCTCGCCTGTGTGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR CCA 90 bp | CAAGCCACGAAGCTCATCGATTCACGCACACAGGCGAGGATGCACTTGGTGTTTCCCAGCCATCTCCTCTaGGGGGATTTCCTCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: QATKLIDSRTQARMHLVFPSHLL*GDFLLW Trigger: CCAGAGGAGGAAATCCCCCCAGAGGAGATGGCTGGG...AAACACCAAGTGCATCCTCGCCTGTGTGCGTGAATCGATGAGCTTCGTGGCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR TCA 90 bp | CGCACACAGGCGAGGATGCACTTGGTGTTTACTGGGGGTGAGCTGGAGAGAAGGAAGGCGGTTATAGTCTaGCACGTAAGGCTTGGGTTT | + |
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Preference number: 4 (lower is better) Translates to: RTQARMHLVFTGGELERRKAVIV*HVRLGF Trigger: AAACCCAAGCCTTACGTGTCAGACTATAACCGCCTT...CCTTCTCTCCAGCTCACCCCCAGTAAACACCAAGTGCATCCTCGCCTGTGTGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR CCA 90 bp | TCACGCACACAGGCGAGGATGCACTTGGTGTTTACTGGGGGTGAGCTGGAGAGATCAGTGATGGACAGATaGCTCATTTCAACCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRTQARMHLVFTGGELERSVMDR*LISTTS Trigger: GGAAGTGGTTGAAATGAGCCATCTGTCCATCACTGA...TCTCTCCAGCTCACCCCCAGTAAACACCAAGTGCATCCTCGCCTGTGTGCGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR GCA 90 bp | CAAGCCACGAAGCTCATCGATTCACGCACACAGGCGAGGATGCACTTGGTGTTTTCTCAAGGTCCAAATTaGCATTGTTCTGTCCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QATKLIDSRTQARMHLVFSQGPN*HCSVPA Trigger: AGCAGGGACAGAACAATGGCAATTTGGACCTTGAGA...AAACACCAAGTGCATCCTCGCCTGTGTGCGTGAATCGATGAGCTTCGTGGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR CAA 90 bp | GCCCGCCCGCCCCTGCCCAAGCCACGAAGCTCATCGATTCACGCACACAGGCGACTGGCCACCGCGTTCTaGGTGACATCCAGGACCTCC | + |
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Preference number: 5 (lower is better) Translates to: ARPPLPKPRSSSIHAHRRLATAF*VTSRTS Trigger: GGAGGTCCTGGATGTCACCAAGAACGCGGTGGCCAG...TCGCCTGTGTGCGTGAATCGATGAGCTTCGTGGCTTGGGCAGGGGCGGGCGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS CCA 90 bp | CAACAGAGTGGCTGGGGGCCTGGGCTTTGCCAGCCGAAGCGTCCGTaGGGTCGGGACTGCCATCTGGGCTGCTCTGGAGACTTGGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: QQSGWGPGLCQPKRP*GRDCHLGCSGDLGN Trigger: GTTTCCCAAGTCTCCAGAGCAGCCCAGATGGCAGTCCCGACCCCACGGACGCTTCGGCTGGCAAAGCCCAGGCCCCCAGCCACTCTGTTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS-3UTR CAA 90 bp | TGTTCTGGCCTCTGGCATCCCCGCCCGCCCGCCCCTGCCCAAGCCACGAAGCTCAGGTCCTTTCGAATTTaGGGCTGGGCCAGGGAGATG | + |
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Preference number: 5 (lower is better) Translates to: CSGLWHPRPPAPAQATKLRSFRI*GWAREM Trigger: CATCTCCCTGGCCCAGCCCAAAATTCGAAAGGACCT...GAGCTTCGTGGCTTGGGCAGGGGCGGGCGGGCGGGGATGCCAGAGGCCAGAACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR CAA 90 bp | CCTCTGGCATCCCCGCCCGCCCGCCCCTGCCCAAGCCACGAAGCTCATCGATTCCTCTTTTTCCTGCCCTaGGCTGTGGAGACACTGGGA | + |
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Preference number: 5 (lower is better) Translates to: PLASPPARPCPSHEAHRFLFFLP*AVETLG Trigger: TCCCAGTGTCTCCACAGCCAAGGGCAGGAAAAAGAG...GAATCGATGAGCTTCGTGGCTTGGGCAGGGGCGGGCGGGCGGGGATGCCAGAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR CAA 90 bp | CGCCCGCCCGCCCCTGCCCAAGCCACGAAGCTCATCGATTCACGCACACAGGCGCTCAGACATTGCCAGTaGGTCTTAGGCTTCGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: RPPAPAQATKLIDSRTQALRHCQ*VLGFAS Trigger: GCTGGCGAAGCCTAAGACCAACTGGCAATGTCTGAG...CGCCTGTGTGCGTGAATCGATGAGCTTCGTGGCTTGGGCAGGGGCGGGCGGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR CAA 90 bp | GCATCCCCGCCCGCCCGCCCCTGCCCAAGCCACGAAGCTCATCGATTCACGCACTTCCACCTCCAGGTCTaGTTGAAGAGGACCATCCAG | + |
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Preference number: 5 (lower is better) Translates to: ASPPARPCPSHEAHRFTHFHLQV*LKRTIQ Trigger: CTGGATGGTCCTCTTCAACAAGACCTGGAGGTGGAA...GTGCGTGAATCGATGAGCTTCGTGGCTTGGGCAGGGGCGGGCGGGCGGGGATGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR CAA 90 bp | TTGTTCTGGCCTCTGGCATCCCCGCCCGCCCGCCCCTGCCCAAGCCACGAAGCTGGCTGCTCTGGAGACTaGGGAAACCTCAGACATGTT | + |
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Preference number: 5 (lower is better) Translates to: LFWPLASPPARPCPSHEAGCSGD*GNLRHV Trigger: AACATGTCTGAGGTTTCCCAAGTCTCCAGAGCAGCC...AGCTTCGTGGCTTGGGCAGGGGCGGGCGGGCGGGGATGCCAGAGGCCAGAACAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS-3UTR CAA 90 bp | TTGTTCTGGCCTCTGGCATCCCCGCCCGCCCGCCCCTGCCCAAGCCACGAAGCTCCTGTCTCTCAGACATaGCCAGTTGGTCTTAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: LFWPLASPPARPCPSHEAPVSQT*PVGLRL Trigger: AAGCCTAAGACCAACTGGCAATGTCTGAGAGACAGG...AGCTTCGTGGCTTGGGCAGGGGCGGGCGGGCGGGGATGCCAGAGGCCAGAACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS CCA 90 bp | CTGGGCTTTGCCAGCCGAAGCGTCCGTGGGGTCGGGACTGCCATCTaGGCTGCTCTGGAGACTTGGGAAACCTCAGACATGTTAATGCTC | + |
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Preference number: 5 (lower is better) Translates to: LGFASRSVRGVGTAI*AALETWETSDMLML Trigger: GAGCATTAACATGTCTGAGGTTTCCCAAGTCTCCAGAGCAGCCCAGATGGCAGTCCCGACCCCACGGACGCTTCGGCTGGCAAAGCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS TCA 90 bp | CGTGAACTGGCCACCGCGTTCTTGGTGACATCCAGGACCTCCCACTaGGGACTGCGATCAGGAACGCACTTTTCTGACAGGGCCTTGGGT | + |
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Preference number: 5 (lower is better) Translates to: RELATAFLVTSRTSH*GLRSGTHFSDRALG Trigger: ACCCAAGGCCCTGTCAGAAAAGTGCGTTCCTGATCGCAGTCCTCAGTGGGAGGTCCTGGATGTCACCAAGAACGCGGTGGCCAGTTCACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS TCA 90 bp | GTTGAGGTCCTTTCGAATTTTGGGCTGGGCCAGGGAGATGATCCGTaGACTGGCCACCGCGTTCTTGGTGACATCCAGGACCTCCCACTG | + |
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Preference number: 5 (lower is better) Translates to: VEVLSNFGLGQGDDP*TGHRVLGDIQDLPL Trigger: CAGTGGGAGGTCCTGGATGTCACCAAGAACGCGGTGGCCAGTTCACGGATCATCTCCCTGGCCCAGCCCAAAATTCGAAAGGACCTCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS GCA 90 bp | CTTTGCCAGCCGAAGCGTCCGTGGGGTCGGGACTGCCATCTGGGCTaGTCTGGAGACTTGGGAAACCTCAGACATGTTAATGCTCCAGAT | + |
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Preference number: 5 (lower is better) Translates to: LCQPKRPWGRDCHLG*SGDLGNLRHVNAPD Trigger: ATCTGGAGCATTAACATGTCTGAGGTTTCCCAAGTCTCCAGAGCAGCCCAGATGGCAGTCCCGACCCCACGGACGCTTCGGCTGGCAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS TCA 90 bp | ATCCAGGACCTCCCACTGAGGACTGCGATCAGGAACGCACTTTTCTaGCAGGGCCTTGGGTGTTGCCAGCTGAAGAAGGCGGTTATAGTC | + |
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Preference number: 5 (lower is better) Translates to: IQDLPLRTAIRNALF*QGLGCCQLKKAVIV Trigger: GACTATAACCGCCTTCTTCAGCTGGCAACACCCAAGGCCCTGTCAGAAAAGTGCGTTCCTGATCGCAGTCCTCAGTGGGAGGTCCTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS GCA 90 bp | ATAAATCGCTCGGTCCAGTATACAGAAGGCCTGTCTCTCAGACATTaGCAGTTGGTCTTAGGCTTCGCCAGCTCCAGCAGCCTCCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: INRSVQYTEGLSLRH*QLVLGFASSSSLRL Trigger: GAGCCGGAGGCTGCTGGAGCTGGCGAAGCCTAAGACCAACTGGCAATGTCTGAGAGACAGGCCTTCTGTATACTGGACCGAGCGATTTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS CCA 90 bp | TGGGCGTTGTCCTGTTATTGTTGTAATATTCCTGGTAGAACCGCTTaGGCCTCGAAAGCTCCTCCATGCGCTGGGACACCACAGGGACCG | + |
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Preference number: 5 (lower is better) Translates to: WALSCYCCNIPGRTA*ASKAPPCAGTPQGP Trigger: CGGTCCCTGTGGTGTCCCAGCGCATGGAGGAGCTTTCGAGGCCCAAGCGGTTCTACCAGGAATATTACAACAATAACAGGACAACGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS GCA 90 bp | TCCTCTGGTTCTTCTGAGGTTCGCCCTGTAGTGGCCTTAGAGCCCTaGAACCAATGGCTCCCAAATGGCTCGCTCTCAAGGTCCAAATTG | + |
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Preference number: 5 (lower is better) Translates to: SSGSSEVRPVVALEP*NQWLPNGSLSRSKL Trigger: CAATTTGGACCTTGAGAGCGAGCCATTTGGGAGCCATTGGTTGCAGGGCTCTAAGGCCACTACAGGGCGAACCTCAGAAGAACCAGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS GCA 90 bp | TCCAGTATACAGAAGGCCAATACAGGCAGAACTGCAAGTTGGTCTTaGGTGGGGAAATCCAGGCATAGCCCTTACAACAGCGCCCCGTCC | + |
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Preference number: 5 (lower is better) Translates to: SSIQKANTGRTASWS*VGKSRHSPYNSAPS Trigger: GGACGGGGCGCTGTTGTAAGGGCTATGCCTGGATTTCCCCACGCAAGACCAACTTGCAGTTCTGCCTGTATTGGCCTTCTGTATACTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020566.7 |
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| CDS CCA 90 bp | GTATACAGAAGGCCAATACAGGCAGAACTGCAAGTTGGTCTTGCGTaGGGAAATCCAGGCATAGCCCTTACAACAGCGCCCCGTCCTGTC | + |
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Preference number: 5 (lower is better) Translates to: VYRRPIQAELQVGLA*GNPGIALTTAPRPV Trigger: GACAGGACGGGGCGCTGTTGTAAGGGCTATGCCTGGATTTCCCCACGCAAGACCAACTTGCAGTTCTGCCTGTATTGGCCTTCTGTATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020566.7 |
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| CDS CCA 90 bp | GCTCGGTCCAGTATACAGAAGGCCAATACAGGCAGAACTGCAAGTTaGTCTTGCGTGGGGAAATCCAGGCATAGCCCTTACAACAGCGCC | + |
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Preference number: 5 (lower is better) Translates to: ARSSIQKANTGRTAS*SCVGKSRHSPYNSA Trigger: GGCGCTGTTGTAAGGGCTATGCCTGGATTTCCCCACGCAAGACCAACTTGCAGTTCTGCCTGTATTGGCCTTCTGTATACTGGACCGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020566.7 |
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| CDS CCA 90 bp | GGCAAGCTCATAAATTCGAGGAGATGCCTGAGCCACCAGAGAGGCTaGGGAGATGTAGTATGGGTTGTAGCCCTCGTTGAGGTCCTTTCG | + |
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Preference number: 5 (lower is better) Translates to: GKLINSRRCLSHQRG*GDVVWVVALVEVLS Trigger: CGAAAGGACCTCAACGAGGGCTACAACCCATACTACATCTCCCCAGCCTCTCTGGTGGCTCAGGCATCTCCTCGAATTTATGAGCTTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS GCA 90 bp | CCAAATGGCTCGCTCTCAAGGTCCAAATTGCCATTGTTCTGTCCCTaGTTTAACTCTCCCAAAGTCTTGACCTCCGGGATTGGGTTACTG | + |
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Preference number: 5 (lower is better) Translates to: PNGSLSRSKLPLFCP*FNSPKVLTSGIGLL Trigger: CAGTAACCCAATCCCGGAGGTCAAGACTTTGGGAGAGTTAAAGCAGGGACAGAACAATGGCAATTTGGACCTTGAGAGCGAGCCATTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS CCA 72 bp | GGCTGGGGGCCTGGGCTTTGCCAGCCGAAGCGTCCGTaGGGTCGGGACTGCCATCTGGGCTGCTCTGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: GWGPGLCQPKRP*GRDCHLGCSGD Trigger: GTCTCCAGAGCAGCCCAGATGGCAGTCCCGACCCCACGGACGCTTCGGCTGGCAAAGCCCAGGCCCCCAGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS CCA 72 bp | GCCAGCCGAAGCGTCCGTGGGGTCGGGACTGCCATCTaGGCTGCTCTGGAGACTTGGGAAACCTCAGACATG | + |
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Preference number: 6 (lower is better) Translates to: ASRSVRGVGTAI*AALETWETSDM Trigger: CATGTCTGAGGTTTCCCAAGTCTCCAGAGCAGCCCAGATGGCAGTCCCGACCCCACGGACGCTTCGGCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS CAA 72 bp | AGCTCCAGCAGCCTCCGGCTCCTCTTTTTCCTGCCCTaGGCTGTGGAGACACTGGGAGTCCGCTCAGTGATG | + |
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Preference number: 6 (lower is better) Translates to: SSSSLRLLFFLP*AVETLGVRSVM Trigger: CATCACTGAGCGGACTCCCAGTGTCTCCACAGCCAAGGGCAGGAAAAAGAGGAGCCGGAGGCTGCTGGAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS GCA 72 bp | CCCTTACAACAGCGCCCCGTCCTGTCTCTCAGACATTaGCAGTTGGTCTTAGGCTTCGCCAGCTCCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PLQQRPVLSLRH*QLVLGFASSSS Trigger: GCTGCTGGAGCTGGCGAAGCCTAAGACCAACTGGCAATGTCTGAGAGACAGGACGGGGCGCTGTTGTAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020566.7 |
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| CDS CAA 90 bp | CGCTCGGTCCAGTATACAGAAGGCCTGTCTCTCAGACATTGCCAGTaGGTCTTAGGCTTCGCCAGCTCCAGCAGCCTCCGGCTCCTCTTT | + |
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Preference number: 6 (lower is better) Translates to: RSVQYTEGLSLRHCQ*VLGFASSSSLRLLF Trigger: AAAGAGGAGCCGGAGGCTGCTGGAGCTGGCGAAGCCTAAGACCAACTGGCAATGTCTGAGAGACAGGCCTTCTGTATACTGGACCGAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS TCA 72 bp | CTCCCACTGAGGACTGCGATCAGGAACGCACTTTTCTaGCAGGGCCTTGGGTGTTGCCAGCTGAAGAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: LPLRTAIRNALF*QGLGCCQLKKA Trigger: CGCCTTCTTCAGCTGGCAACACCCAAGGCCCTGTCAGAAAAGTGCGTTCCTGATCGCAGTCCTCAGTGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS TCA 72 bp | GCCACCGCGTTCTTGGTGACATCCAGGACCTCCCACTaGGGACTGCGATCAGGAACGCACTTTTCTGACAGG | + |
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Preference number: 6 (lower is better) Translates to: ATAFLVTSRTSH*GLRSGTHFSDR Trigger: CCTGTCAGAAAAGTGCGTTCCTGATCGCAGTCCTCAGTGGGAGGTCCTGGATGTCACCAAGAACGCGGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS CCA 72 bp | CCACCTCCAGGTCTTGTTGAAGAGGACCATCCAGATTaGAGGTCTCCGGGAGCTCTTCCCCAGCCATCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PPPGLVEEDHPD*RSPGALPQPSP Trigger: AGGAGATGGCTGGGGAAGAGCTCCCGGAGACCTCCAATCTGGATGGTCCTCTTCAACAAGACCTGGAGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS TCA 72 bp | CTTTCGAATTTTGGGCTGGGCCAGGGAGATGATCCGTaGACTGGCCACCGCGTTCTTGGTGACATCCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: LSNFGLGQGDDP*TGHRVLGDIQD Trigger: GTCCTGGATGTCACCAAGAACGCGGTGGCCAGTTCACGGATCATCTCCCTGGCCCAGCCCAAAATTCGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS CCA 72 bp | TTCGGGGTAGCCAGTTGCTTCAGCCGGTTAGAAGCTTaGTACTCCAGAGTGGACCGAGGGATGGACCAGATG | + |
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Preference number: 6 (lower is better) Translates to: FGVASCFSRLEA*YSRVDRGMDQM Trigger: CATCTGGTCCATCCCTCGGTCCACTCTGGAGTACCAAGCTTCTAACCGGCTGAAGCAACTGGCTACCCCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS CAA 72 bp | CTTCGGGGTAGCCAGTTGCTTCAGCCGGTTAGAAGCTaGGTACTCCAGAGTGGACCGAGGGATGGACCAGAT | + |
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Preference number: 6 (lower is better) Translates to: LRGSQLLQPVRS*VLQSGPRDGPD Trigger: ATCTGGTCCATCCCTCGGTCCACTCTGGAGTACCAAGCTTCTAACCGGCTGAAGCAACTGGCTACCCCGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS CAA 72 bp | CAGTATACAGAAGGCCTGTCTCTCAGACATTGCCAGTaGGTCTTAGGCTTCGCCAGCTCCAGCAGCCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: QYTEGLSLRHCQ*VLGFASSSSLR Trigger: CCGGAGGCTGCTGGAGCTGGCGAAGCCTAAGACCAACTGGCAATGTCTGAGAGACAGGCCTTCTGTATACTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS CAA 90 bp | GATAAATCGCTCGGTCCAGTATACAGAAGGCCTGTCTCTCAGACATaGCCAGTTGGTCTTAGGCTTCGCCAGCTCCAGCAGCCTCCGGCT | + |
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Preference number: 6 (lower is better) Translates to: DKSLGPVYRRPVSQT*PVGLRLRQLQQPPA Trigger: AGCCGGAGGCTGCTGGAGCTGGCGAAGCCTAAGACCAACTGGCAATGTCTGAGAGACAGGCCTTCTGTATACTGGACCGAGCGATTTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS TCA 72 bp | TGCCCTTGGCTGTGGAGACACTGGGAGTCCGCTCAGTaGTGGACAGATGGCTCATTTCAACCACTTCCACCT | + |
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Preference number: 6 (lower is better) Translates to: CPWLWRHWESAQ*WTDGSFQPLPP Trigger: AGGTGGAAGTGGTTGAAATGAGCCATCTGTCCATCACTGAGCGGACTCCCAGTGTCTCCACAGCCAAGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS TCA 72 bp | AGGCTGGGGAGATGTAGTATGGGTTGTAGCCCTCGTTaGGGTCCTTTCGAATTTTGGGCTGGGCCAGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: RLGRCSMGCSPR*GPFEFWAGPGR Trigger: TCTCCCTGGCCCAGCCCAAAATTCGAAAGGACCTCAACGAGGGCTACAACCCATACTACATCTCCCCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS GCA 72 bp | TCGGTCCAGTATACAGAAGGCCTGTCTCTCAGACATTaGCAGTTGGTCTTAGGCTTCGCCAGCTCCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SVQYTEGLSLRH*QLVLGFASSSS Trigger: GCTGCTGGAGCTGGCGAAGCCTAAGACCAACTGGCAATGTCTGAGAGACAGGCCTTCTGTATACTGGACCGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS CCA 72 bp | AGGCCAATACAGGCAGAACTGCAAGTTGGTCTTGCGTaGGGAAATCCAGGCATAGCCCTTACAACAGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: RPIQAELQVGLA*GNPGIALTTAP Trigger: GGGCGCTGTTGTAAGGGCTATGCCTGGATTTCCCCACGCAAGACCAACTTGCAGTTCTGCCTGTATTGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020566.7 |
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| CDS CAA 72 bp | CTCGGTCCAGTATACAGAAGGCCTGTCTCTCAGACATaGCCAGTTGGTCTTAGGCTTCGCCAGCTCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: LGPVYRRPVSQT*PVGLRLRQLQQ Trigger: CTGCTGGAGCTGGCGAAGCCTAAGACCAACTGGCAATGTCTGAGAGACAGGCCTTCTGTATACTGGACCGAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077433.13 |
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| CDS CAA 90 bp | GATGGACAGATGGCTCATTTCAACCACTTCCACCTCCAGGTCTTGTaGAAGAGGACCATCCAGATTGGAGGTCTCCGGGAGCTCTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: DGQMAHFNHFHLQVL*KRTIQIGGLRELFP Trigger: GGGGAAGAGCTCCCGGAGACCTCCAATCTGGATGGTCCTCTTCAACAAGACCTGGAGGTGGAAGTGGTTGAAATGAGCCATCTGTCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS CCA 72 bp | GTGGAGACACTGGGAGTCCGCTCAGTGATGGACAGATaGCTCATTTCAACCACTTCCACCTCCAGGTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: VETLGVRSVMDR*LISTTSTSRSC Trigger: ACAAGACCTGGAGGTGGAAGTGGTTGAAATGAGCCATCTGTCCATCACTGAGCGGACTCCCAGTGTCTCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS CCA 72 bp | GACTGCGATCAGGAACGCACTTTTCTGACAGGGCCTTaGGTGTTGCCAGCTGAAGAAGGCGGTTATAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: DCDQERTFLTGP*VLPAEEGGYSL Trigger: CAGACTATAACCGCCTTCTTCAGCTGGCAACACCCAAGGCCCTGTCAGAAAAGTGCGTTCCTGATCGCAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS TCA 72 bp | CTTGGGTGTTGCCAGCTGAAGAAGGCGGTTATAGTCTaGCACGTAAGGCTTGGGTTTTGGCATAGGGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: LGCCQLKKAVIV*HVRLGFWHRVP Trigger: TGGGACCCTATGCCAAAACCCAAGCCTTACGTGTCAGACTATAACCGCCTTCTTCAGCTGGCAACACCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS CCA 72 bp | TGCCTGAGCCACCAGAGAGGCTGGGGAGATGTAGTATaGGTTGTAGCCCTCGTTGAGGTCCTTTCGAATTTT | + |
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Preference number: 6 (lower is better) Translates to: CLSHQRGWGDVV*VVALVEVLSNF Trigger: AAAATTCGAAAGGACCTCAACGAGGGCTACAACCCATACTACATCTCCCCAGCCTCTCTGGTGGCTCAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS CCA 72 bp | ATAAATTCGAGGAGATGCCTGAGCCACCAGAGAGGCTaGGGAGATGTAGTATGGGTTGTAGCCCTCGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: INSRRCLSHQRG*GDVVWVVALVE Trigger: CTCAACGAGGGCTACAACCCATACTACATCTCCCCAGCCTCTCTGGTGGCTCAGGCATCTCCTCGAATTTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS CAA 72 bp | ATGGCTCATTTCAACCACTTCCACCTCCAGGTCTTGTaGAAGAGGACCATCCAGATTGGAGGTCTCCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: MAHFNHFHLQVL*KRTIQIGGLRE Trigger: CTCCCGGAGACCTCCAATCTGGATGGTCCTCTTCAACAAGACCTGGAGGTGGAAGTGGTTGAAATGAGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS CAA 72 bp | CAGATGGCTCATTTCAACCACTTCCACCTCCAGGTCTaGTTGAAGAGGACCATCCAGATTGGAGGTCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: QMAHFNHFHLQV*LKRTIQIGGLR Trigger: CCGGAGACCTCCAATCTGGATGGTCCTCTTCAACAAGACCTGGAGGTGGAAGTGGTTGAAATGAGCCATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS CAA 72 bp | GATCAGGAACGCACTTTTCTGACAGGGCCTTGGGTGTaGCCAGCTGAAGAAGGCGGTTATAGTCTGACACGT | + |
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Preference number: 6 (lower is better) Translates to: DQERTFLTGPWV*PAEEGGYSLTR Trigger: ACGTGTCAGACTATAACCGCCTTCTTCAGCTGGCAACACCCAAGGCCCTGTCAGAAAAGTGCGTTCCTGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS CAA 90 bp | AGTGATGGACAGATGGCTCATTTCAACCACTTCCACCTCCAGGTCTaGTTGAAGAGGACCATCCAGATTGGAGGTCTCCGGGAGCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SDGQMAHFNHFHLQV*LKRTIQIGGLRELF Trigger: GAAGAGCTCCCGGAGACCTCCAATCTGGATGGTCCTCTTCAACAAGACCTGGAGGTGGAAGTGGTTGAAATGAGCCATCTGTCCATCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS CAA 90 bp | AAGCTTGGTACTCCAGAGTGGACCGAGGGATGGACCAGATGGGCGTaGTCCTGTTATTGTTGTAATATTCCTGGTAGAACCGCTTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: KLGTPEWTEGWTRWA*SCYCCNIPGRTAWA Trigger: GGCCCAAGCGGTTCTACCAGGAATATTACAACAATAACAGGACAACGCCCATCTGGTCCATCCCTCGGTCCACTCTGGAGTACCAAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS CAA 90 bp | CCCTGCAACCAATGGCTCCCAAATGGCTCGCTCTCAAGGTCCAAATaGCCATTGTTCTGTCCCTGCTTTAACTCTCCCAAAGTCTTGACC | + |
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Preference number: 6 (lower is better) Translates to: PCNQWLPNGSLSRSK*PLFCPCFNSPKVLT Trigger: GGTCAAGACTTTGGGAGAGTTAAAGCAGGGACAGAACAATGGCAATTTGGACCTTGAGAGCGAGCCATTTGGGAGCCATTGGTTGCAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS CCA 72 bp | TCCTGTTATTGTTGTAATATTCCTGGTAGAACCGCTTaGGCCTCGAAAGCTCCTCCATGCGCTGGGACACCA | + |
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Preference number: 6 (lower is better) Translates to: SCYCCNIPGRTA*ASKAPPCAGTP Trigger: TGGTGTCCCAGCGCATGGAGGAGCTTTCGAGGCCCAAGCGGTTCTACCAGGAATATTACAACAATAACAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS CAA 72 bp | CCATTGTTCTGTCCCTGCTTTAACTCTCCCAAAGTCTaGACCTCCGGGATTGGGTTACTGAGCAAACTGGCC | + |
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Preference number: 6 (lower is better) Translates to: PLFCPCFNSPKV*TSGIGLLSKLA Trigger: GGCCAGTTTGCTCAGTAACCCAATCCCGGAGGTCAAGACTTTGGGAGAGTTAAAGCAGGGACAGAACAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS CAA 72 bp | TGGGAAACCTCAGACATGTTAATGCTCCAGATGTTATaGCGAACCTTCGGGGTAGCCAGTTGCTTCAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: WETSDMLMLQML*RTFGVASCFSR Trigger: CCGGCTGAAGCAACTGGCTACCCCGAAGGTTCGCAATAACATCTGGAGCATTAACATGTCTGAGGTTTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS CAA 90 bp | CTGGAGACTTGGGAAACCTCAGACATGTTAATGCTCCAGATGTTATaGCGAACCTTCGGGGTAGCCAGTTGCTTCAGCCGGTTAGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: LETWETSDMLMLQML*RTFGVASCFSRLEA Trigger: AGCTTCTAACCGGCTGAAGCAACTGGCTACCCCGAAGGTTCGCAATAACATCTGGAGCATTAACATGTCTGAGGTTTCCCAAGTCTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS CCA 72 bp | AGTATACAGAAGGCCAATACAGGCAGAACTGCAAGTTaGTCTTGCGTGGGGAAATCCAGGCATAGCCCTTAC | + |
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Preference number: 6 (lower is better) Translates to: SIQKANTGRTAS*SCVGKSRHSPY Trigger: GTAAGGGCTATGCCTGGATTTCCCCACGCAAGACCAACTTGCAGTTCTGCCTGTATTGGCCTTCTGTATACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020566.7 |
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| CDS CCA 72 bp | CTTGGTACTCCAGAGTGGACCGAGGGATGGACCAGATaGGCGTTGTCCTGTTATTGTTGTAATATTCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: LGTPEWTEGWTR*ALSCYCCNIPG Trigger: ACCAGGAATATTACAACAATAACAGGACAACGCCCATCTGGTCCATCCCTCGGTCCACTCTGGAGTACCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS CAA 72 bp | ACTCCAGAGTGGACCGAGGGATGGACCAGATGGGCGTaGTCCTGTTATTGTTGTAATATTCCTGGTAGAACC | + |
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Preference number: 6 (lower is better) Translates to: TPEWTEGWTRWA*SCYCCNIPGRT Trigger: GGTTCTACCAGGAATATTACAACAATAACAGGACAACGCCCATCTGGTCCATCCCTCGGTCCACTCTGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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| CDS CAA 72 bp | CTCCCAAATGGCTCGCTCTCAAGGTCCAAATTGCCATaGTTCTGTCCCTGCTTTAACTCTCCCAAAGTCTTG | + |
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Preference number: 6 (lower is better) Translates to: LPNGSLSRSKLP*FCPCFNSPKVL Trigger: CAAGACTTTGGGAGAGTTAAAGCAGGGACAGAACAATGGCAATTTGGACCTTGAGAGCGAGCCATTTGGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020566.7 ENSMUST00000077433.13 |
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