RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for THBS3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028047

Ensembl transcript IDs: ENSMUST00000029682.11, ENSMUST00000119084.2, ENSMUST00000136881.8, ENSMUST00000142051.8

Found 340 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATCTGGGTCCCGTGGCCACCTCCTCACACTCTTCCCTGGAGCAGCTaGCTCCGGAATGGCTCAAAGTCCTCAGGCACTGTGTCATTGCAT +
Preference number: 1 (lower is better)
Translates to: IWVPWPPPHTLPWSS*LRNGSKSSGTVSLH
Trigger: ATGCAATGACACAGTGCCTGAGGACTTTGAGCCATTCCGGAGGCAGCTGCTCCAGGGAAGAGTGTGAGGAGGTGGCCACGGGACCCAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136881.8
3UTR CCA 90 bp ACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTaGCCACCTCCTCACACTCTTCCCTGGAGCAGCTGCCTCCGGAAT +
Preference number: 1 (lower is better)
Translates to: TEFNGQRSPIRIWVP*PPPHTLPWSSCLRN
Trigger: ATTCCGGAGGCAGCTGCTCCAGGGAAGAGTGTGAGGAGGTGGCCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136881.8
3UTR CCA 90 bp GTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTaGGTCCCGTGGCCACCTCCTCACACTCTTCCCTGGAGCAGCTGC +
Preference number: 1 (lower is better)
Translates to: VSRTEFNGQRSPIRI*VPWPPPHTLPWSSC
Trigger: GCAGCTGCTCCAGGGAAGAGTGTGAGGAGGTGGCCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136881.8
3UTR CCA 90 bp CAGCCGCCATCTATAGGATGTCTTGTCTCGCCAACCCACATTCCGTaGGTCAGTCCACAGCAGTCGTACCTGATCAGGGGTGTGGCCAGT +
Preference number: 1 (lower is better)
Translates to: QPPSIGCLVSPTHIP*VSPQQSYLIRGVAS
Trigger: ACTGGCCACACCCCTGATCAGGTACGACTGCTGTGGACTGACCCACGGAATGTGGGTTGGCGAGACAAGACATCCTATAGATGGCGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136881.8
3UTR-3UTR TCA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGCCACCCCTCTGGGGCTaGGCTCCCTGGTGGGTGCCA +
Preference number: 2 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGPPLWG*APWWVP
Trigger: TGGCACCCACCAGGGAGCTCAGCCCCAGAGGGGTGG...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
3UTR-3UTR GCA 90 bp TGGAGCAGCTGCCTCCGGAATGGCTCAAAGTCCTCAGGCACTGTGTCATTGCATGGGGTGTGGCCAGTATaGCACAGAGCATTCCGGAGG +
Preference number: 2 (lower is better)
Translates to: WSSCLRNGSKSSGTVSLHGVWPV*HRAFRR
Trigger: CCTCCGGAATGCTCTGTGGCATACTGGCCACACCCC...ATGCAATGACACAGTGCCTGAGGACTTTGAGCCATTCCGGAGGCAGCTGCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136881.8
3UTR-3UTR CAA 90 bp AAGGTCTCCGATCAGGATCTGGGTCCCGTGGCCACCTCCTCACACTCTTCCCTGCCGAATGTAGCCAACTaGGGGCCGGTGGAGCAGCCG +
Preference number: 3 (lower is better)
Translates to: KVSDQDLGPVATSSHSSLPNVAN*GPVEQP
Trigger: CGGCTGCTCCACCGGCCCCAAGTTGGCTACATTCGG...CAGGGAAGAGTGTGAGGAGGTGGCCACGGGACCCAGATCCTGATCGGAGACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136881.8
3UTR CCA 72 bp AATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTaGCCACCTCCTCACACTCTTCCCTGGAGCAGCTGC +
Preference number: 3 (lower is better)
Translates to: NGQRSPIRIWVP*PPPHTLPWSSC
Trigger: GCAGCTGCTCCAGGGAAGAGTGTGAGGAGGTGGCCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136881.8
3UTR CCA 72 bp ACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTaGGTCCCGTGGCCACCTCCTCACACTCTTCCCTGG +
Preference number: 3 (lower is better)
Translates to: TEFNGQRSPIRI*VPWPPPHTLPW
Trigger: CCAGGGAAGAGTGTGAGGAGGTGGCCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136881.8
3UTR CCA 72 bp TCTATAGGATGTCTTGTCTCGCCAACCCACATTCCGTaGGTCAGTCCACAGCAGTCGTACCTGATCAGGGGT +
Preference number: 3 (lower is better)
Translates to: SIGCLVSPTHIP*VSPQQSYLIRG
Trigger: ACCCCTGATCAGGTACGACTGCTGTGGACTGACCCACGGAATGTGGGTTGGCGAGACAAGACATCCTATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136881.8
CDS-3UTR CCA 90 bp CTGGGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCAAGAGACAGTGGGCGTaGATGTGGCAGGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LGLSSLVGAREPSVRLRGKRQWA*MWQGLW
Trigger: CCACAGCCCCTGCCACATCCACGCCCACTGTCTCTT...GCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTCAGTCCACATACAGCTaGAGGCCAGGGCTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCQSTYS*RPGLGR
Trigger: TCGACCCAGCCCTGGCCTGCAGCTGTATGTGGACTG...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTAGGGATCGGGGCCAGTaGTGGAAGGCCAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCRDRGQ*WKASML
Trigger: CAACATGCTGGCCTTCCAGCACTGGCCCCGATCCCT...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTGCTGGAACGCAGCCCTaGCTCTGGTTCCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCAGTQP*LWFPRK
Trigger: TTTCCTGGGGAACCAGAGCCAGGGCTGCGTTCCAGC...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTAAGAGACAGTGGGCGTaGATGTGGCAGGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCKRQWA*MWQGLW
Trigger: CCACAGCCCCTGCCACATCCACGCCCACTGTCTCTT...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTGCCACAGCTACCATCTaGCTGGATTCGCCCACTGTC +
Preference number: 4 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCATATI*LDSPTV
Trigger: GACAGTGGGCGAATCCAGGCAGATGGTAGCTGTGGC...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTCCGGAGGTGCTCACCTaGGCCAGATATGGATGTCAC +
Preference number: 4 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCPEVLT*ARYGCH
Trigger: GTGACATCCATATCTGGCCCAGGTGAGCACCTCCGG...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR TCA 90 bp CTGGGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCGAGCTATTTGGCAGCTaGGGACAGTTGTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LGLSSLVGAREPSVRLRGELFGS*GQLSLV
Trigger: CACCAAGGACAACTGTCCTCAGCTGCCAAATAGCTC...GCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp GAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTAGACCCCAGGGTCTCCAGAACAGGAGAGCCGTGTGTGTaGGCCCATCAGCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: EPSVRLRGCRLDPRVSRTGEPCV*AHQPGL
Trigger: CAGGCCTGGCTGATGGGCGCACACACACGGCTCTCC...TGTTCTGGAGACCCTGGGGTCTAACCTACAGCCCCTCAGCCTAACGGATGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp CTGGGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCCACCAGGTCGCTGTCTaGATCTGTCTGGGTAGGATT +
Preference number: 4 (lower is better)
Translates to: LGLSSLVGAREPSVRLRGHQVAV*ICLGRI
Trigger: AATCCTACCCAGACAGATGCAGACAGCGACCTGGTG...GCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp CTGGGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCGGAAGGCCAGCATGTTaGTCACCCAGTTTACAGTCC +
Preference number: 4 (lower is better)
Translates to: LGLSSLVGAREPSVRLRGGRPAC*SPSLQS
Trigger: GGACTGTAAACTGGGTGACCAACATGCTGGCCTTCC...GCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTCCGGTCTGTCTGCAGTaGGTTGGGTACTTTAGGGCA +
Preference number: 4 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCPVCLQ*VGYFRA
Trigger: TGCCCTAAAGTACCCAACCCACTGCAGACAGACCGG...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTCGTCGCTGTCTTCGTTaGTGTCACAGACATCCCCCA +
Preference number: 4 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCRRCLR*CHRHPP
Trigger: TGGGGGATGTCTGTGACACCAACGAAGACAGCGACG...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR TCA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTAAACAGGGGTCAGCGTaGGCACACTCGTTGATGTCA +
Preference number: 4 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCKQGSA*AHSLMS
Trigger: TGACATCAACGAGTGTGCTCACGCTGACCCCTGTTT...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR TCA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTCACTGTCCTGGTAACTaGAGAGGAAGCCCGCATAGT +
Preference number: 4 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCHCPGN*RGSPHS
Trigger: ACTATGCGGGCTTCCTCTTCAGTTACCAGGACAGTG...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTAAGAGGACACCACCTTaGTTTGGAGGGAGGCGGAAA +
Preference number: 4 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCKRTPP*FGGRRK
Trigger: TTTCCGCCTCCCTCCAAAGCAAGGTGGTGTCCTCTT...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp AGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTACAGTCCACATACAGCTaGAGGCCAGGGCTGGGTCGA +
Preference number: 4 (lower is better)
Translates to: SSLVGAREPSVRLRGCRLQSTYS*RPGLGR
Trigger: TCGACCCAGCCCTGGCCTGCAGCTGTATGTGGACTG...TAACCTACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp GACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTGCCATTGCCCTaGAGGCCAGGTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: DPRVSRTEFNGQRSPIRIWVPLP*RPGGQG
Trigger: GCCCTGCCCACCTGGCCTGCAGGGCAATGGCACCCA...GATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGTGGGTGCCATTGCCCTaGAGGCCAGGTGGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWWVPLP*RPGGQG
Trigger: GCCCTGCCCACCTGGCCTGCAGGGCAATGGCACCCA...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTACCCCACCGTGTTGGTaGAGATGGAATTTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCTPPCW*RWNLGH
Trigger: GTGACCCAAATTCCATCTGCACCAACACGGTGGGGT...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp AGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTAGGACAGGCCTCGCAGTaGAAGCCAGGCATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: SSLVGAREPSVRLRGCRLGQASQ*KPGMVL
Trigger: CAACACCATGCCTGGCTTCCACTGCGAGGCCTGTCC...TAACCTACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTCCGTGTTGGTGCAGATaGAATTTGGGTCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCPCWCR*NLGHSL
Trigger: GAGGCTGTGACCCAAATTCCATCTGCACCAACACGG...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp AGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTATTGTCCTTGGTGTCCTaGTGCCCGTCTCCGTCGCTG +
Preference number: 4 (lower is better)
Translates to: SSLVGAREPSVRLRGCRLLSLVS*CPSPSL
Trigger: CAGCGACGGAGACGGGCACCAGGACACCAAGGACAA...TAACCTACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp CTGGGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCCAGCTGAGAGCTATTTaGCAGCTGAGGACAGTTGTC +
Preference number: 4 (lower is better)
Translates to: LGLSSLVGAREPSVRLRGQLRAI*QLRTVV
Trigger: GACAACTGTCCTCAGCTGCCAAATAGCTCTCAGCTG...GCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp CTGGGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCGTGACTGTGTTCACGTaGAAGGTGCCTTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: LGLSSLVGAREPSVRLRGVTVFT*KVPSKS
Trigger: GGACTTTGAAGGCACCTTCCACGTGAACACAGTCAC...GCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR TCA 90 bp CCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGCGCTGGGGCTGCAGTGTaGACGCTGCTCGTGGAAACC +
Preference number: 4 (lower is better)
Translates to: PEQSSMAKGLRSGSGSRGAGAAV*TLLVET
Trigger: GGTTTCCACGAGCAGCGTTCACACTGCAGCCCCAGC...GCCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR TCA 90 bp CCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGCAGCCAGGCATGGTGTTaGTGCAGCTGGACCCCGGGA +
Preference number: 4 (lower is better)
Translates to: PEQSSMAKGLRSGSGSRGSQAWC*CSWTPG
Trigger: TCCCGGGGTCCAGCTGCATCAACACCATGCCTGGCT...GCCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR TCA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTCCATCTGAGTCCTTCTaGTTAGGATTGGGTACCAGG +
Preference number: 4 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCPSESF*LGLGTR
Trigger: CCTGGTACCCAATCCTAATCAGAAGGACTCAGATGG...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGGAGAGCCGTGTGTGTaGGCCCATCAGCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWGEPCV*AHQPGL
Trigger: CAGGCCTGGCTGATGGGCGCACACACACGGCTCTCC...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp CCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGCCAGTCCACTGACCTCTaGTGGAGGGATCGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PEQSSMAKGLRSGSGSRGQSTDL*WRDRGQ
Trigger: CTGGCCCCGATCCCTCCAGCAGAGGTCAGTGGACTG...GCCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp GACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCCACAGTGGGTGCCATTaGCCTGCAGGCCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: DPRVSRTEFNGQRSPIRIHSGCH*PAGQVG
Trigger: GCCCACCTGGCCTGCAGGGCAATGGCACCCACTGTG...GATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp AGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTACACGTTCCCATTCCCTaGCCAGCCCACGTTACACTG +
Preference number: 4 (lower is better)
Translates to: SSLVGAREPSVRLRGCRLHVPIP*PAHVTL
Trigger: CAGTGTAACGTGGGCTGGGCAGGGAATGGGAACGTG...TAACCTACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029682.11
CDS-3UTR CCA 90 bp GGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCATGTGGCAGGGGCTGTaGGCAGGGCTGTGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: GSPEQSSMAKGLRSGSGSMWQGL*AGLWQV
Trigger: GACCTGCCACAGCCCTGCCCACAGCCCCTGCCACAT...GGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp CCCCAGAATCCGCCACTAGCTGGGGACCCTCATAGAGCTTCACCCGAATGTAGCCTGCTCGGAAAGGCGTaGCCTGCCAGTAGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: PQNPPLAGDPHRASPECSLLGKA*PASRSA
Trigger: AGCAGACCTACTGGCAGGCCACGCCTTTCCGAGCAG...GCTACATTCGGGTGAAGCTCTATGAGGGTCCCCAGCTAGTGGCGGATTCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136881.8
CDS-3UTR CCA 90 bp AGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTACCGGAGGTGCTCACCTaGGCCAGATATGGATGTCAC +
Preference number: 4 (lower is better)
Translates to: SSLVGAREPSVRLRGCRLPEVLT*ARYGCH
Trigger: GTGACATCCATATCTGGCCCAGGTGAGCACCTCCGG...TAACCTACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR TCA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTCACACCGTTGCCATCTaGGTCCTTCTGATTAGGATT +
Preference number: 4 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCHTVAI*VLLIRI
Trigger: AATCCTAATCAGAAGGACTCAGATGGCAACGGTGTG...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR TCA 90 bp GAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTAGACCCCAGGGTCTCCAGAACATGGATGTCACTGCCTTaGGCTGAAGCCCTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: EPSVRLRGCRLDPRVSRTWMSLP*AEALVG
Trigger: CCCAACCAGGGCTTCAGCTCAAGGCAGTGACATCCA...TGTTCTGGAGACCCTGGGGTCTAACCTACAGCCCCTCAGCCTAACGGATGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000136881.8
CDS-3UTR TCA 90 bp GAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTAGACCCCAGGGTCTCCAGAACACACAGCAGTCGTACCTaGTCAGGGGTGTGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: EPSVRLRGCRLDPRVSRTHSSRT*SGVWPV
Trigger: TACTGGCCACACCCCTGATCAGGTACGACTGCTGTG...TGTTCTGGAGACCCTGGGGTCTAACCTACAGCCCCTCAGCCTAACGGATGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGCAGTCCACTGACCTCTaGTGGAGGGATCGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWQSTDL*WRDRGQ
Trigger: CTGGCCCCGATCCCTCCAGCAGAGGTCAGTGGACTG...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp AGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCACAGTGGGTGCCATTaGCCTGCAGGCCAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: RVSRTEFNGQRSPIRIWVHSGCH*PAGQVG
Trigger: GCCCACCTGGCCTGCAGGGCAATGGCACCCACTGTG...GACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTCAGAGGGTCAACCACTaGGTCATTGTCAAAGTCATC +
Preference number: 4 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCQRVNH*VIVKVI
Trigger: GATGACTTTGACAATGACGCAGTGGTTGACCCTCTG...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp GACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTCCACTGACCTCTGCTaGAGGGATCGGGGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: DPRVSRTEFNGQRSPIRISTDLC*RDRGQC
Trigger: GCACTGGCCCCGATCCCTCCAGCAGAGGTCAGTGGA...GATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp GGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCTCCACTGACCTCTGCTaGAGGGATCGGGGCCAGTGC +
Preference number: 4 (lower is better)
Translates to: GSPEQSSMAKGLRSGSGSSTDLC*RDRGQC
Trigger: GCACTGGCCCCGATCCCTCCAGCAGAGGTCAGTGGA...GGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp TCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGACGCAGCCCTGGCTCTaGTTCCCCAGGAAACCCAGG +
Preference number: 4 (lower is better)
Translates to: SRTEFNGQRSPIRIWVPWTQPWL*FPRKPR
Trigger: CCTGGGTTTCCTGGGGAACCAGAGCCAGGGCTGCGT...CCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp CCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGCGCTGGAACGCAGCCCTaGCTCTGGTTCCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: PEQSSMAKGLRSGSGSRGAGTQP*LWFPRK
Trigger: TTTCCTGGGGAACCAGAGCCAGGGCTGCGTTCCAGC...GCCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR TCA 90 bp AGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCGCTGGGGCTGCAGTGTaGACGCTGCTCGTGGAAACC +
Preference number: 4 (lower is better)
Translates to: RVSRTEFNGQRSPIRIWVAGAAV*TLLVET
Trigger: GGTTTCCACGAGCAGCGTTCACACTGCAGCCCCAGC...GACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR TCA 90 bp AGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCAGCCAGGCATGGTGTTaGTGCAGCTGGACCCCGGGA +
Preference number: 4 (lower is better)
Translates to: RVSRTEFNGQRSPIRIWVSQAWC*CSWTPG
Trigger: TCCCGGGGTCCAGCTGCATCAACACCATGCCTGGCT...GACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR TCA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTGGAGATTGGACCAAATaGTGTTTTCTTGGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCGDWTK*CFLGRS
Trigger: GCTTCTCCCAAGAAAACATCATTTGGTCCAATCTCC...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp GAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTAGACCCCAGGGTCTCCAGAACATCAGCCAGGCCTGCTTaGTGTAGGTTCACTGCATGG +
Preference number: 4 (lower is better)
Translates to: EPSVRLRGCRLDPRVSRTSARPA*CRFTAW
Trigger: CCATGCAGTGAACCTACAGCAAGCAGGCCTGGCTGA...TGTTCTGGAGACCCTGGGGTCTAACCTACAGCCCCTCAGCCTAACGGATGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp CCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGCTGTCATCACAGTGGGTaGCATTGCCCTGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PEQSSMAKGLRSGSGSRGCHHSG*HCPAGQ
Trigger: CTGGCCTGCAGGGCAATGGCACCCACTGTGATGACA...GCCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp GGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCACCAGACACTCGGGTaGCCTTGTACCCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: GSPEQSSMAKGLRSGSGSHQTLG*PCTLED
Trigger: GTCCTCCAGGGTACAAGGGCACCCGAGTGTCTGGTG...GGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGCACCAGACACTCGGGTaGCCTTGTACCCTGGAGGAC +
Preference number: 4 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGHQTLG*PCTLED
Trigger: GTCCTCCAGGGTACAAGGGCACCCGAGTGTCTGGTG...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp GAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTAGACCCCAGGGTCTCCAGAACAAGAGCATTCCGGAGGTaGTCACCTGGGCCAGATATG +
Preference number: 4 (lower is better)
Translates to: EPSVRLRGCRLDPRVSRTRAFRR*SPGPDM
Trigger: CATATCTGGCCCAGGTGAGCACCTCCGGAATGCTCT...TGTTCTGGAGACCCTGGGGTCTAACCTACAGCCCCTCAGCCTAACGGATGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGGGGTGTGGCCAGTATaGCACAGAGCATTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWGVWPV*HRAFRR
Trigger: CCTCCGGAATGCTCTGTGGCATACTGGCCACACCCC...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGGGGGTGTGGCCAGTATaGCACAGAGCATTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGGVWPV*HRAFRR
Trigger: CCTCCGGAATGCTCTGTGGCATACTGGCCACACCCC...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
58% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp AGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTAGTCGTCTCCTTGGAATaGACATTCACTCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SSLVGAREPSVRLRGCRLVVSLE*TFTQGS
Trigger: GGAGCCCTGAGTGAATGTCCATTCCAAGGAGACGAC...TAACCTACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGGGACAGGCCTCGCAGTaGAAGCCAGGCATGGTGTTG +
Preference number: 4 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGGQASQ*KPGMVL
Trigger: CAACACCATGCCTGGCTTCCACTGCGAGGCCTGTCC...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp AGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTACCGTGTTGGTGCAGATaGAATTTGGGTCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: SSLVGAREPSVRLRGCRLPCWCR*NLGHSL
Trigger: GAGGCTGTGACCCAAATTCCATCTGCACCAACACGG...TAACCTACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp AGACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATACGCAGCCCTGGCTCTaGTTCCCCAGGAAACCCAGG +
Preference number: 4 (lower is better)
Translates to: RPQGLQNRVQWPKVSDQDTQPWL*FPRKPR
Trigger: CCTGGGTTTCCTGGGGAACCAGAGCCAGGGCTGCGT...ATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTTGTCCTTGGTGTCCTaGTGCCCGTCTCCGTCGCTG +
Preference number: 4 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGLSLVS*CPSPSL
Trigger: CAGCGACGGAGACGGGCACCAGGACACCAAGGACAA...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp TCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGCTGCTCGGAAAGGCGTaGCCTGCCAGTAGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: SRTEFNGQRSPIRIWVPWLLGKA*PASRSA
Trigger: AGCAGACCTACTGGCAGGCCACGCCTTTCCGAGCAG...CCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000136881.8
CDS-3UTR CCA 90 bp GGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCTGCTCGGAAAGGCGTaGCCTGCCAGTAGGTCTGCT +
Preference number: 4 (lower is better)
Translates to: GSPEQSSMAKGLRSGSGSLLGKA*PASRSA
Trigger: AGCAGACCTACTGGCAGGCCACGCCTTTCCGAGCAG...GGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000136881.8
3UTR CAA 72 bp GGGACCCTCATAGAGCTTCACCCGAATGTAGCCAACTaGGGGCCGGTGGAGCAGCCGCCATCTATAGGATGT +
Preference number: 4 (lower is better)
Translates to: GTLIELHPNVAN*GPVEQPPSIGC
Trigger: ACATCCTATAGATGGCGGCTGCTCCACCGGCCCCAAGTTGGCTACATTCGGGTGAAGCTCTATGAGGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136881.8
CDS-3UTR TCA 90 bp GAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTAGACCCCAGGGTCTCCAGAACAGGTGTTCCGGATGAGTaGCATTTCCTTCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: EPSVRLRGCRLDPRVSRTGVPDE*HFLHLV
Trigger: GACCAGGTGAAGGAAATGTCACTCATCCGGAACACC...TGTTCTGGAGACCCTGGGGTCTAACCTACAGCCCCTCAGCCTAACGGATGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR TCA 90 bp GAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTAGACCCCAGGGTCTCCAGAACAAAACAGGGGTCAGCGTaGGCACACTCGTTGATGTCA +
Preference number: 4 (lower is better)
Translates to: EPSVRLRGCRLDPRVSRTKQGSA*AHSLMS
Trigger: TGACATCAACGAGTGTGCTCACGCTGACCCCTGTTT...TGTTCTGGAGACCCTGGGGTCTAACCTACAGCCCCTCAGCCTAACGGATGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR TCA 90 bp GAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTAGACCCCAGGGTCTCCAGAACACACTGTCCTGGTAACTaGAGAGGAAGCCCGCATAGT +
Preference number: 4 (lower is better)
Translates to: EPSVRLRGCRLDPRVSRTHCPGN*RGSPHS
Trigger: ACTATGCGGGCTTCCTCTTCAGTTACCAGGACAGTG...TGTTCTGGAGACCCTGGGGTCTAACCTACAGCCCCTCAGCCTAACGGATGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR TCA 90 bp GGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCTGGATGTCACTGCCTTaGGCTGAAGCCCTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: GSPEQSSMAKGLRSGSGSWMSLP*AEALVG
Trigger: CCCAACCAGGGCTTCAGCTCAAGGCAGTGACATCCA...GGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000136881.8
CDS-3UTR TCA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTGGATGTCACTGCCTTaGGCTGAAGCCCTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGWMSLP*AEALVG
Trigger: CCCAACCAGGGCTTCAGCTCAAGGCAGTGACATCCA...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000136881.8
CDS-3UTR TCA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGCACAGCAGTCGTACCTaGTCAGGGGTGTGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGHSSRT*SGVWPV
Trigger: TACTGGCCACACCCCTGATCAGGTACGACTGCTGTG...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGCCACAGCTACCATCTaGCTGGATTCGCCCACTGTC +
Preference number: 4 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWATATI*LDSPTV
Trigger: GACAGTGGGCGAATCCAGGCAGATGGTAGCTGTGGC...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp AGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTATGTCCGAATCTTCTCTaGCACAGCTACCATCTGCCT +
Preference number: 4 (lower is better)
Translates to: SSLVGAREPSVRLRGCRLCPNLL*HSYHLP
Trigger: AGGCAGATGGTAGCTGTGGCAGAGAAGATTCGGACA...TAACCTACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp GAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTAGACCCCAGGGTCTCCAGAACATCACTGCATGGACTTTaGCATCTTCCCGCTGGTACC +
Preference number: 4 (lower is better)
Translates to: EPSVRLRGCRLDPRVSRTSLHGL*HLPAGT
Trigger: GGTACCAGCGGGAAGATGGCAAAGTCCATGCAGTGA...TGTTCTGGAGACCCTGGGGTCTAACCTACAGCCCCTCAGCCTAACGGATGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGCTCGAGCATAGTCGATaGCCACACCAGACACTCGGG +
Preference number: 4 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGLEHSR*PHQTLG
Trigger: CCCGAGTGTCTGGTGTGGGCATCGACTATGCTCGAG...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp TCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGCTCGAGCATAGTCGATaGCCACACCAGACACTCGGG +
Preference number: 4 (lower is better)
Translates to: SRTEFNGQRSPIRIWVPWLEHSR*PHQTLG
Trigger: CCCGAGTGTCTGGTGTGGGCATCGACTATGCTCGAG...CCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTATTCATCAATGTCATTaGAGACCTGTTTGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCIHQCH*RPVCWL
Trigger: GAGCCAGCAAACAGGTCTGCAATGACATTGATGAAT...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp AGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTACATCTCCTTCTCCATTaGCATCCGTGTCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: SSLVGAREPSVRLRGCRLHLLLH*HPCPSG
Trigger: ACCAGAAGGACACGGATGGCAATGGAGAAGGAGATG...TAACCTACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp AGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTACATCACCCACACCGTTaGCATCTGAGTCCTTCTGAT +
Preference number: 4 (lower is better)
Translates to: SSLVGAREPSVRLRGCRLHHPHR*HLSPSD
Trigger: ATCAGAAGGACTCAGATGGCAACGGTGTGGGTGATG...TAACCTACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp CCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGCAGAGCATTCCGGAGGTaGTCACCTGGGCCAGATATG +
Preference number: 4 (lower is better)
Translates to: PEQSSMAKGLRSGSGSRGRAFRR*SPGPDM
Trigger: CATATCTGGCCCAGGTGAGCACCTCCGGAATGCTCT...GCCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp AGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCGATCGGGGCCAGTGCTaGAAGGCCAGCATGTTGGTC +
Preference number: 4 (lower is better)
Translates to: RVSRTEFNGQRSPIRIWVDRGQC*KASMLV
Trigger: GACCAACATGCTGGCCTTCCAGCACTGGCCCCGATC...GACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp GAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTAGACCCCAGGGTCTCCAGAACATGCAGACCTGTTTGCTaGCTCGAGCATAGTCGATGC +
Preference number: 4 (lower is better)
Translates to: EPSVRLRGCRLDPRVSRTCRPVC*LEHSRC
Trigger: GCATCGACTATGCTCGAGCCAGCAAACAGGTCTGCA...TGTTCTGGAGACCCTGGGGTCTAACCTACAGCCCCTCAGCCTAACGGATGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp CCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGCGAGCACTACCCAGTTTaGATCGATCTGGGCGTCACC +
Preference number: 4 (lower is better)
Translates to: PEQSSMAKGLRSGSGSRGEHYPV*IDLGVT
Trigger: GGTGACGCCCAGATCGATCCAAACTGGGTAGTGCTC...GCCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000136881.8
CDS-3UTR CCA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGCCAACCCACATTCCGTaGGTCAGTCCACAGCAGTCG +
Preference number: 4 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWPTHIP*VSPQQS
Trigger: CGACTGCTGTGGACTGACCCACGGAATGTGGGTTGG...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTTCATTGCATCGGTACTaGAGATTGGACCAAATGATG +
Preference number: 4 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCSLHRY*RLDQMM
Trigger: CATCATTTGGTCCAATCTCCAGTACCGATGCAATGA...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR TCA 90 bp CCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGCTGGAAACCGCACACCTaGCACTCCATGATGGTGTTC +
Preference number: 4 (lower is better)
Translates to: PEQSSMAKGLRSGSGSRGWKPHT*HSMMVF
Trigger: GAACACCATCATGGAGTGTCAGGTGTGCGGTTTCCA...GCCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp GACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTCAGCCAGGCCTGCTTaGTGTAGGTTCACTGCATGG +
Preference number: 4 (lower is better)
Translates to: DPRVSRTEFNGQRSPIRISARPA*CRFTAW
Trigger: CCATGCAGTGAACCTACAGCAAGCAGGCCTGGCTGA...GATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp AGACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATTGTCATCACAGTGGGTaGCATTGCCCTGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RPQGLQNRVQWPKVSDQDCHHSG*HCPAGQ
Trigger: CTGGCCTGCAGGGCAATGGCACCCACTGTGATGACA...ATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGCAGCTACCATCTGCCTaGATTCGCCCACTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWQLPSA*IRPLSA
Trigger: TGCTGACAGTGGGCGAATCCAGGCAGATGGTAGCTG...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp AGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTAATGGAGTCGTCTCCTTaGAATGGACATTCACTCAGG +
Preference number: 4 (lower is better)
Translates to: SSLVGAREPSVRLRGCRLMESSP*NGHSLR
Trigger: CCTGAGTGAATGTCCATTCCAAGGAGACGACTCCAT...TAACCTACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp GAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTAGACCCCAGGGTCTCCAGAACAAAGACCCCACCGTGTTaGTGCAGATGGAATTTGGGT +
Preference number: 4 (lower is better)
Translates to: EPSVRLRGCRLDPRVSRTKTPPC*CRWNLG
Trigger: ACCCAAATTCCATCTGCACCAACACGGTGGGGTCTT...TGTTCTGGAGACCCTGGGGTCTAACCTACAGCCCCTCAGCCTAACGGATGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp AGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTACATTGTTGGGAACATTaGGACAGTTGTCGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: SSLVGAREPSVRLRGCRLHCWEH*DSCRRH
Trigger: ATGCCTGCGACAACTGTCCCAATGTTCCCAACAATG...TAACCTACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGCCGGTCTGTCTGCAGTaGGTTGGGTACTTTAGGGCA +
Preference number: 4 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWPVCLQ*VGYFRA
Trigger: TGCCCTAAAGTACCCAACCCACTGCAGACAGACCGG...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp GACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCGAGCACTACCCAGTTTaGATCGATCTGGGCGTCACC +
Preference number: 4 (lower is better)
Translates to: DPRVSRTEFNGQRSPIRIEHYPV*IDLGVT
Trigger: GGTGACGCCCAGATCGATCCAAACTGGGTAGTGCTC...GATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000136881.8
CDS-3UTR CCA 90 bp AAGGTCTCCGATCAGGATCTGGGTCCCGTGGCCACCTCCTCACACTCTTCCCTGCACTGTCCTGGTAACTaGTTGAGCACTACCCAGTTT +
Preference number: 4 (lower is better)
Translates to: KVSDQDLGPVATSSHSSLHCPGN*LSTTQF
Trigger: AAACTGGGTAGTGCTCAACCAGTTACCAGGACAGTG...CAGGGAAGAGTGTGAGGAGGTGGCCACGGGACCCAGATCCTGATCGGAGACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136881.8
CDS-3UTR TCA 90 bp GAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTAGACCCCAGGGTCTCCAGAACACACACCGTTGCCATCTaGGTCCTTCTGATTAGGATT +
Preference number: 4 (lower is better)
Translates to: EPSVRLRGCRLDPRVSRTHTVAI*VLLIRI
Trigger: AATCCTAATCAGAAGGACTCAGATGGCAACGGTGTG...TGTTCTGGAGACCCTGGGGTCTAACCTACAGCCCCTCAGCCTAACGGATGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp GACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCAAGAGGACACCACCTTaGTTTGGAGGGAGGCGGAAA +
Preference number: 4 (lower is better)
Translates to: DPRVSRTEFNGQRSPIRIKRTPP*FGGRRK
Trigger: TTTCCGCCTCCCTCCAAAGCAAGGTGGTGTCCTCTT...GATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp GACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTCACTGCATGGACTTTaGCATCTTCCCGCTGGTACC +
Preference number: 4 (lower is better)
Translates to: DPRVSRTEFNGQRSPIRISLHGL*HLPAGT
Trigger: GGTACCAGCGGGAAGATGGCAAAGTCCATGCAGTGA...GATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp GACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCCAGTGCGCTGGTCACTaGATTGTGAATGGAGTCGTC +
Preference number: 4 (lower is better)
Translates to: DPRVSRTEFNGQRSPIRIQCAGH*IVNGVV
Trigger: GACGACTCCATTCACAATGCAGTGACCAGCGCACTG...GATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGCAGTGCGCTGGTCACTaGATTGTGAATGGAGTCGTC +
Preference number: 4 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWQCAGH*IVNGVV
Trigger: GACGACTCCATTCACAATGCAGTGACCAGCGCACTG...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp TCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGGCTTGTTGTTATCCATaGAGGGAAGAGCCTGGTCCG +
Preference number: 4 (lower is better)
Translates to: SRTEFNGQRSPIRIWVPWACCYP*REEPGP
Trigger: CGGACCAGGCTCTTCCCTGCATGGATAACAACAAGC...CCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029682.11
CDS-3UTR GCA 90 bp AGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTAGGCAATTGTCCTGCTTaGAGTGCTTGTTGTTATCCA +
Preference number: 4 (lower is better)
Translates to: SSLVGAREPSVRLRGCRLGNCPA*SACCYP
Trigger: TGGATAACAACAAGCACTGCAAGCAGGACAATTGCC...TAACCTACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029682.11
CDS-3UTR GCA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGCACCAGGTCGCTGTCTaGATCTGTCTGGGTAGGATT +
Preference number: 4 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWHQVAV*ICLGRI
Trigger: AATCCTACCCAGACAGATGCAGACAGCGACCTGGTG...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp AGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCAGCTACCATCTGCCTaGATTCGCCCACTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: RVSRTEFNGQRSPIRIWVQLPSA*IRPLSA
Trigger: TGCTGACAGTGGGCGAATCCAGGCAGATGGTAGCTG...GACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp GGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCGAGGGAGGCGGAAAGTaGACAAGAGGTAGATATCCC +
Preference number: 4 (lower is better)
Translates to: GSPEQSSMAKGLRSGSGSEGGGK*TRGRYP
Trigger: GGGATATCTACCTCTTGTCCACTTTCCGCCTCCCTC...GGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCGTCTCCTTGGAATaGACATTCACTCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWVVSLE*TFTQGS
Trigger: GGAGCCCTGAGTGAATGTCCATTCCAAGGAGACGAC...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTTGAAGAGGGTGAGCTaGGTGACCAATGCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGLKRVS*VTNALV
Trigger: GACCAAGGCATTGGTCACCCAGCTCACCCTCTTCAA...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGTTGAAGAGGGTGAGCTaGGTGACCAATGCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWLKRVS*VTNALV
Trigger: GACCAAGGCATTGGTCACCCAGCTCACCCTCTTCAA...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGAGCTCCACTAGGATCTaGTTGAAGAGGGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGSSTRI*LKRVSW
Trigger: CCAGCTCACCCTCTTCAACCAGATCCTAGTGGAGCT...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp TCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGAGCTCCACTAGGATCTaGTTGAAGAGGGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SRTEFNGQRSPIRIWVPWSSTRI*LKRVSW
Trigger: CCAGCTCACCCTCTTCAACCAGATCCTAGTGGAGCT...CCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGTTGATGTCATCACAGTaGGTGCCATTGCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWLMSSQ*VPLPCR
Trigger: CCTGCAGGGCAATGGCACCCACTGTGATGACATCAA...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp GACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTTGATGTCATCACAGTaGGTGCCATTGCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: DPRVSRTEFNGQRSPIRILMSSQ*VPLPCR
Trigger: CCTGCAGGGCAATGGCACCCACTGTGATGACATCAA...GATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTGCAGACCTGTTTGCTaGCTCGAGCATAGTCGATGC +
Preference number: 4 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGCRPVC*LEHSRC
Trigger: GCATCGACTATGCTCGAGCCAGCAAACAGGTCTGCA...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp TCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGGCATCGTCATCACACTaGTCCCCGACACCATCGTTA +
Preference number: 4 (lower is better)
Translates to: SRTEFNGQRSPIRIWVPWASSSH*SPTPSL
Trigger: TAACGATGGTGTCGGGGACCAGTGTGATGACGATGC...CCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp AGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCGTCGCTGTCTTCGTTaGTGTCACAGACATCCCCCA +
Preference number: 4 (lower is better)
Translates to: RVSRTEFNGQRSPIRIWVRRCLR*CHRHPP
Trigger: TGGGGGATGTCTGTGACACCAACGAAGACAGCGACG...GACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR TCA 90 bp AGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCGGTGTTCCGGATGAGTaGCATTTCCTTCACCTGGTC +
Preference number: 4 (lower is better)
Translates to: RVSRTEFNGQRSPIRIWVGVPDE*HFLHLV
Trigger: GACCAGGTGAAGGAAATGTCACTCATCCGGAACACC...GACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR TCA 90 bp AGACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATGAGCTATTTGGCAGCTaGGGACAGTTGTCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RPQGLQNRVQWPKVSDQDELFGS*GQLSLV
Trigger: CACCAAGGACAACTGTCCTCAGCTGCCAAATAGCTC...ATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR TCA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGCCATCTGAGTCCTTCTaGTTAGGATTGGGTACCAGG +
Preference number: 4 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGPSESF*LGLGTR
Trigger: CCTGGTACCCAATCCTAATCAGAAGGACTCAGATGG...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp AGACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATACCCCACCGTGTTGGTaGAGATGGAATTTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: RPQGLQNRVQWPKVSDQDTPPCW*RWNLGH
Trigger: GTGACCCAAATTCCATCTGCACCAACACGGTGGGGT...ATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp GACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCATGACACAGCGCCATTaGGTTCAAAGAGACAGTGGG +
Preference number: 4 (lower is better)
Translates to: DPRVSRTEFNGQRSPIRIMTQRH*VQRDSG
Trigger: CCCACTGTCTCTTTGAACGCAATGGCGCTGTGTCAT...GATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGATGACACAGCGCCATTaGGTTCAAAGAGACAGTGGG +
Preference number: 4 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWMTQRH*VQRDSG
Trigger: CCCACTGTCTCTTTGAACGCAATGGCGCTGTGTCAT...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGCATCTCCTTCTCCATTaGCATCCGTGTCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGHLLLH*HPCPSG
Trigger: ACCAGAAGGACACGGATGGCAATGGAGAAGGAGATG...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp GACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTCATCCCGGTCTGTCTaGAGTGGGTTGGGTACTTTA +
Preference number: 4 (lower is better)
Translates to: DPRVSRTEFNGQRSPIRISSRSV*SGLGTL
Trigger: TAAAGTACCCAACCCACTGCAGACAGACCGGGATGA...GATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp AGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCGAGGGAGGCGGAAAGTaGACAAGAGGTAGATATCCC +
Preference number: 4 (lower is better)
Translates to: RVSRTEFNGQRSPIRIWVEGGGK*TRGRYP
Trigger: GGGATATCTACCTCTTGTCCACTTTCCGCCTCCCTC...GACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTGTAGGTTCACTGCATaGACTTTGCCATCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGCRFTA*TLPSSR
Trigger: GCGGGAAGATGGCAAAGTCCATGCAGTGAACCTACA...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp AGACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATGGAAGGCCAGCATGTTaGTCACCCAGTTTACAGTCC +
Preference number: 4 (lower is better)
Translates to: RPQGLQNRVQWPKVSDQDGRPAC*SPSLQS
Trigger: GGACTGTAAACTGGGTGACCAACATGCTGGCCTTCC...ATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTGGATTGCAGTGCGCTaGTCACTGCATTGTGAATGG +
Preference number: 4 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGWIAVR*SLHCEW
Trigger: CCATTCACAATGCAGTGACCAGCGCACTGCAATCCA...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGGTGCAGATGGAATTTaGGTCACAGCCTCCGTTGTT +
Preference number: 4 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWGADGI*VTASVV
Trigger: AACAACGGAGGCTGTGACCCAAATTCCATCTGCACC...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp AGACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATGCATCGTCATCACACTaGTCCCCGACACCATCGTTA +
Preference number: 4 (lower is better)
Translates to: RPQGLQNRVQWPKVSDQDASSSH*SPTPSL
Trigger: TAACGATGGTGTCGGGGACCAGTGTGATGACGATGC...ATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp GAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTAGACCCCAGGGTCTCCAGAACACTGTCTGCATCTGTCTaGGTAGGATTGCTCATTTCA +
Preference number: 4 (lower is better)
Translates to: EPSVRLRGCRLDPRVSRTLSASV*VGLLIS
Trigger: TGAAATGAGCAATCCTACCCAGACAGATGCAGACAG...TGTTCTGGAGACCCTGGGGTCTAACCTACAGCCCCTCAGCCTAACGGATGGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp TCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGCAGCTGAGAGCTATTTaGCAGCTGAGGACAGTTGTC +
Preference number: 4 (lower is better)
Translates to: SRTEFNGQRSPIRIWVPWQLRAI*QLRTVV
Trigger: GACAACTGTCCTCAGCTGCCAAATAGCTCTCAGCTG...CCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTGACTGTGTTCACGTaGAAGGTGCCTTCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWVTVFT*KVPSKS
Trigger: GGACTTTGAAGGCACCTTCCACGTGAACACAGTCAC...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR TCA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGAGATATCCCCAGCAGTaGGTAAAGCTGTCCGAATCT +
Preference number: 4 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWRYPQQ*VKLSES
Trigger: AGATTCGGACAGCTTTACTCACTGCTGGGGATATCT...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR TCA 90 bp TCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGAGATATCCCCAGCAGTaGGTAAAGCTGTCCGAATCT +
Preference number: 4 (lower is better)
Translates to: SRTEFNGQRSPIRIWVPWRYPQQ*VKLSES
Trigger: AGATTCGGACAGCTTTACTCACTGCTGGGGATATCT...CCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp GACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTCTGTGTCTGAATTCTaGTGGTCCTTGTTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: DPRVSRTEFNGQRSPIRISVSEF*WSLLGN
Trigger: GTTCCCCAACAAGGACCAGCAGAATTCAGACACAGA...GATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp AGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCTCATCCCGGTCTGTCTaGAGTGGGTTGGGTACTTTA +
Preference number: 4 (lower is better)
Translates to: RVSRTEFNGQRSPIRIWVSSRSV*SGLGTL
Trigger: TAAAGTACCCAACCCACTGCAGACAGACCGGGATGA...GACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp AGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCATCACCCACACCGTTaGCATCTGAGTCCTTCTGAT +
Preference number: 4 (lower is better)
Translates to: RVSRTEFNGQRSPIRIWVHHPHR*HLSPSD
Trigger: ATCAGAAGGACTCAGATGGCAACGGTGTGGGTGATG...GACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp GCTGCCTCCGGAATGGCTCAAAGTCCTCAGGCACTGTGTCATTGCATCGGTACTCAGAGGGTCAACCACTaGGTCATTGTCAAAGTCATC +
Preference number: 4 (lower is better)
Translates to: AASGMAQSPQALCHCIGTQRVNH*VIVKVI
Trigger: GATGACTTTGACAATGACGCAGTGGTTGACCCTCTG...AGTACCGATGCAATGACACAGTGCCTGAGGACTTTGAGCCATTCCGGAGGCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136881.8
CDS-3UTR CCA 90 bp GGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCATGGAGTCGTCTCCTTaGAATGGACATTCACTCAGG +
Preference number: 4 (lower is better)
Translates to: GSPEQSSMAKGLRSGSGSMESSP*NGHSLR
Trigger: CCTGAGTGAATGTCCATTCCAAGGAGACGACTCCAT...GGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp AGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCTGGATTGCAGTGCGCTaGTCACTGCATTGTGAATGG +
Preference number: 4 (lower is better)
Translates to: RVSRTEFNGQRSPIRIWVWIAVR*SLHCEW
Trigger: CCATTCACAATGCAGTGACCAGCGCACTGCAATCCA...GACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp AGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCAAGACCCCACCGTGTTaGTGCAGATGGAATTTGGGT +
Preference number: 4 (lower is better)
Translates to: RVSRTEFNGQRSPIRIWVKTPPC*CRWNLG
Trigger: ACCCAAATTCCATCTGCACCAACACGGTGGGGTCTT...GACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp GGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCATTGTTGGGAACATTaGGACAGTTGTCGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: GSPEQSSMAKGLRSGSGSHCWEH*DSCRRH
Trigger: ATGCCTGCGACAACTGTCCCAATGTTCCCAACAATG...GGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGCCATCCGTGTCCTTCTaGTCATTGTTGGGAACATTG +
Preference number: 4 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWPSVSF*SLLGTL
Trigger: CAATGTTCCCAACAATGACCAGAAGGACACGGATGG...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR TCA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGAAACGAGTCTGTGTCTaGATTCTGCTGGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWKRVCV*ILLVLV
Trigger: AACAAGGACCAGCAGAATTCAGACACAGACTCGTTT...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR TCA 90 bp TCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGAAACGAGTCTGTGTCTaGATTCTGCTGGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: SRTEFNGQRSPIRIWVPWKRVCV*ILLVLV
Trigger: AACAAGGACCAGCAGAATTCAGACACAGACTCGTTT...CCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp GGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCTTGTCCTGCTTGCAGTaGTTGTTGTTATCCATGCAG +
Preference number: 4 (lower is better)
Translates to: GSPEQSSMAKGLRSGSGSLSCLQ*LLLSMQ
Trigger: CTGCATGGATAACAACAAGCACTGCAAGCAGGACAA...GGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029682.11
CDS-3UTR GCA 90 bp AGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCTCTGTGTCTGAATTCTaGTGGTCCTTGTTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: RVSRTEFNGQRSPIRIWVSVSEF*WSLLGN
Trigger: GTTCCCCAACAAGGACCAGCAGAATTCAGACACAGA...GACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR GCA 90 bp AGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCAGAGGGTCAACCACTaGGTCATTGTCAAAGTCATC +
Preference number: 4 (lower is better)
Translates to: RVSRTEFNGQRSPIRIWVQRVNH*VIVKVI
Trigger: GATGACTTTGACAATGACGCAGTGGTTGACCCTCTG...GACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000136881.8
CDS-3UTR CCA 90 bp GACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCCTTCTTGCCCAGAGTTaGGTGTCAAAAGGCAATTGT +
Preference number: 4 (lower is better)
Translates to: DPRVSRTEFNGQRSPIRILLAQS*VSKGNC
Trigger: ACAATTGCCTTTTGACACCCAACTCTGGGCAAGAAG...GATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp AGACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCCATCCGTGTCCTTCTaGTCATTGTTGGGAACATTG +
Preference number: 4 (lower is better)
Translates to: RPQGLQNRVQWPKVSDQDPSVSF*SLLGTL
Trigger: CAATGTTCCCAACAATGACCAGAAGGACACGGATGG...ATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGCTGTCTGCATCTGTCTaGGTAGGATTGCTCATTTCA +
Preference number: 4 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWLSASV*VGLLIS
Trigger: TGAAATGAGCAATCCTACCCAGACAGATGCAGACAG...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp TCAAAGTCCTCAGGCACTGTGTCATTGCATCGGTACTGGAGATTGGACCAAATGGAGCACTACCCAGTTTaGATCGATCTGGGCGTCACC +
Preference number: 4 (lower is better)
Translates to: SKSSGTVSLHRYWRLDQMEHYPV*IDLGVT
Trigger: GGTGACGCCCAGATCGATCCAAACTGGGTAGTGCTC...CATTTGGTCCAATCTCCAGTACCGATGCAATGACACAGTGCCTGAGGACTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136881.8
CDS-3UTR TCA 90 bp AGACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATGGAGATTGGACCAAATaGTGTTTTCTTGGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: RPQGLQNRVQWPKVSDQDGDWTK*CFLGRS
Trigger: GCTTCTCCCAAGAAAACATCATTTGGTCCAATCTCC...ATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp AGACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTTCTTGCCCAGAGTTaGGTGTCAAAAGGCAATTGT +
Preference number: 4 (lower is better)
Translates to: RPQGLQNRVQWPKVSDQDLLAQS*VSKGNC
Trigger: ACAATTGCCTTTTGACACCCAACTCTGGGCAAGAAG...ATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CCA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGTCATTGCATCGGTACTaGAGATTGGACCAAATGATG +
Preference number: 4 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWSLHRY*RLDQMM
Trigger: CATCATTTGGTCCAATCTCCAGTACCGATGCAATGA...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CTGGGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCGGCTGTGGCAGGTCCTaGCTGGAACGCAGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: LGLSSLVGAREPSVRLRGGCGRS*LERSPG
Trigger: GCCAGGGCTGCGTTCCAGCAAGGACCTGCCACAGCC...GCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CTGGGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCGACACTCGGGTGCCCTaGTACCCTGGAGGACAGGCC +
Preference number: 5 (lower is better)
Translates to: LGLSSLVGAREPSVRLRGDTRVP*YPGGQA
Trigger: GGCCTGTCCTCCAGGGTACAAGGGCACCCGAGTGTC...GCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTGACACTCGGGTGCCCTaGTACCCTGGAGGACAGGCC +
Preference number: 5 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCDTRVP*YPGGQA
Trigger: GGCCTGTCCTCCAGGGTACAAGGGCACCCGAGTGTC...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CTGGGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCGGACACCACCTTGCTTaGGAGGGAGGCGGAAAGTGG +
Preference number: 5 (lower is better)
Translates to: LGLSSLVGAREPSVRLRGGHHLA*EGGGKW
Trigger: CCACTTTCCGCCTCCCTCCAAAGCAAGGTGGTGTCC...GCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CTGGGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCCGGCAGGGACCACATTaGAAAGACCCCACCGTGTTG +
Preference number: 5 (lower is better)
Translates to: LGLSSLVGAREPSVRLRGRQGPH*KDPTVL
Trigger: CAACACGGTGGGGTCTTTCAAATGTGGTCCCTGCCG...GCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS GCA 90 bp GGCTGGGTCGAGAAGGTCCTCGGAGTCGCAGGAGAGCCGTGTGTGTaGGCCCATCAGCCAGGCCTGCTTGCTGTAGGTTCACTGCATGGA +
Preference number: 5 (lower is better)
Translates to: GWVEKVLGVAGEPCV*AHQPGLLAVGSLHG
Trigger: TCCATGCAGTGAACCTACAGCAAGCAGGCCTGGCTGATGGGCGCACACACACGGCTCTCCTGCGACTCCGAGGACCTTCTCGACCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000142051.8
CDS CCA 90 bp CCAGACACTCGGGTGCCCTTGTACCCTGGAGGACAGGCCTCGCAGTaGAAGCCAGGCATGGTGTTGATGCAGCTGGACCCCGGGAAACAG +
Preference number: 5 (lower is better)
Translates to: PDTRVPLYPGGQASQ*KPGMVLMQLDPGKQ
Trigger: CTGTTTCCCGGGGTCCAGCTGCATCAACACCATGCCTGGCTTCCACTGCGAGGCCTGTCCTCCAGGGTACAAGGGCACCCGAGTGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp AGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTATCACAGTGGGTGCCATaGCCCTGCAGGCCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: SSLVGAREPSVRLRGCRLSQWVP*PCRPGG
Trigger: CCCACCTGGCCTGCAGGGCAATGGCACCCACTGTGA...TAACCTACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS GCA 90 bp GTTTGCTGGCTCGAGCATAGTCGATGCCCACACCAGACACTCGGGTaGCCTTGTACCCTGGAGGACAGGCCTCGCAGTGGAAGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: VCWLEHSRCPHQTLG*PCTLEDRPRSGSQA
Trigger: TGCCTGGCTTCCACTGCGAGGCCTGTCCTCCAGGGTACAAGGGCACCCGAGTGTCTGGTGTGGGCATCGACTATGCTCGAGCCAGCAAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTTCCACTAGGATCTGGTaGAAGAGGGTGAGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCSTRIW*KRVSWV
Trigger: CACCCAGCTCACCCTCTTCAACCAGATCCTAGTGGA...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CTGGGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGGTGCAGATGGAATTaGGGTCACAGCCTCCGTTGT +
Preference number: 5 (lower is better)
Translates to: LGLSSLVGAREPSVRLRGWCRWN*GHSLRC
Trigger: ACAACGGAGGCTGTGACCCAAATTCCATCTGCACCA...GCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CTGGGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCGGTACTTTAGGGCAATaGTCCAACCCGTTGGGGATG +
Preference number: 5 (lower is better)
Translates to: LGLSSLVGAREPSVRLRGGTLGQ*SNPLGM
Trigger: CATCCCCAACGGGTTGGACAATTGCCCTAAAGTACC...GCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CTGGGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTCTGTCTGGGTAGGATaGCTCATTTCAGGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: LGLSSLVGAREPSVRLRGSVWVG*LISGQL
Trigger: CAGCTGCCCTGAAATGAGCAATCCTACCCAGACAGA...GCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CCA 90 bp GTTGGTCACCCAGTTTACAGTCCACATACAGCTGCAGGCCAGGGCTaGGTCGAGAAGGTCCTCGGAGTCGCAGGAGAGCCGTGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: VGHPVYSPHTAAGQG*VEKVLGVAGEPCVC
Trigger: GCACACACACGGCTCTCCTGCGACTCCGAGGACCTTCTCGACCCAGCCCTGGCCTGCAGCTGTATGTGGACTGTAAACTGGGTGACCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000142051.8
CDS CCA 90 bp ACCTCTGCTGGAGGGATCGGGGCCAGTGCTGGAAGGCCAGCATGTTaGTCACCCAGTTTACAGTCCACATACAGCTGCAGGCCAGGGCTG +
Preference number: 5 (lower is better)
Translates to: TSAGGIGASAGRPAC*SPSLQSTYSCRPGL
Trigger: CAGCCCTGGCCTGCAGCTGTATGTGGACTGTAAACTGGGTGACCAACATGCTGGCCTTCCAGCACTGGCCCCGATCCCTCCAGCAGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000142051.8
CDS-3UTR CAA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTCGCACCAGCACTTTGTaGATCTTGCCCACAACAGAG +
Preference number: 5 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCRTSTL*ILPTTE
Trigger: CTCTGTTGTGGGCAAGATCAACAAAGTGCTGGTGCG...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTTTCACTGCATGGACTTaGCCATCTTCCCGCTGGTAC +
Preference number: 5 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCFTAWT*PSSRWY
Trigger: GTACCAGCGGGAAGATGGCAAAGTCCATGCAGTGAA...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGGCTGTGGCAGGTCCTaGCTGGAACGCAGCCCTGGC +
Preference number: 5 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWGCGRS*LERSPG
Trigger: GCCAGGGCTGCGTTCCAGCAAGGACCTGCCACAGCC...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CTGGGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTTCTGCTGGTCCTTGTaGGGGAACAGTCGACAATTG +
Preference number: 5 (lower is better)
Translates to: LGLSSLVGAREPSVRLRGFCWSL*GNSRQL
Trigger: CAATTGTCGACTGTTCCCCAACAAGGACCAGCAGAA...GCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CTGGGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTCTGTCTGCAGTGGGTaGGGTACTTTAGGGCAATTG +
Preference number: 5 (lower is better)
Translates to: LGLSSLVGAREPSVRLRGSVCSG*GTLGQL
Trigger: CAATTGCCCTAAAGTACCCAACCCACTGCAGACAGA...GCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS GCA 90 bp AGTCGCAGGAGAGCCGTGTGTGTGCGCCCATCAGCCAGGCCTGCTTaGTGTAGGTTCACTGCATGGACTTTGCCATCTTCCCGCTGGTAC +
Preference number: 5 (lower is better)
Translates to: SRRRAVCVRPSARPA*CRFTAWTLPSSRWY
Trigger: GTACCAGCGGGAAGATGGCAAAGTCCATGCAGTGAACCTACAGCAAGCAGGCCTGGCTGATGGGCGCACACACACGGCTCTCCTGCGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000142051.8
CDS GCA 90 bp GGAAGGCCAGCATGTTGGTCACCCAGTTTACAGTCCACATACAGCTaGAGGCCAGGGCTGGGTCGAGAAGGTCCTCGGAGTCGCAGGAGA +
Preference number: 5 (lower is better)
Translates to: GRPACWSPSLQSTYS*RPGLGREGPRSRRR
Trigger: TCTCCTGCGACTCCGAGGACCTTCTCGACCCAGCCCTGGCCTGCAGCTGTATGTGGACTGTAAACTGGGTGACCAACATGCTGGCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000142051.8
CDS CCA 90 bp GGTACTCATACACTTCCATACAGTCCACGCCTCGGAAGCAGGGGCTaGGGCTGCAGTGTGAACGCTGCTCGTGGAAACCGCACACCTGAC +
Preference number: 5 (lower is better)
Translates to: GTHTLPYSPRLGSRG*GCSVNAARGNRTPD
Trigger: GTCAGGTGTGCGGTTTCCACGAGCAGCGTTCACACTGCAGCCCCAGCCCCTGCTTCCGAGGCGTGGACTGTATGGAAGTGTATGAGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGTCACAGTGGGTGCCATaGCCCTGCAGGCCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWSQWVP*PCRPGG
Trigger: CCCACCTGGCCTGCAGGGCAATGGCACCCACTGTGA...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CTGGGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTCTTCTTGCCCAGAGTaGGGTGTCAAAAGGCAATTG +
Preference number: 5 (lower is better)
Translates to: LGLSSLVGAREPSVRLRGSSCPE*GVKRQL
Trigger: CAATTGCCTTTTGACACCCAACTCTGGGCAAGAAGA...GCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTGTGTCCTTCTGGTCATaGTTGGGAACATTGGGACAG +
Preference number: 5 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCVSFWS*LGTLGQ
Trigger: CTGTCCCAATGTTCCCAACAATGACCAGAAGGACAC...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp TCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGCCGAATGTAGCCAACTaGGGGCCGGTGGAGCAGCCG +
Preference number: 5 (lower is better)
Translates to: SRTEFNGQRSPIRIWVPWPNVAN*GPVEQP
Trigger: CGGCTGCTCCACCGGCCCCAAGTTGGCTACATTCGG...CCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGCGGACACCACCTTGCTTaGGAGGGAGGCGGAAAGTGG +
Preference number: 5 (lower is better)
Translates to: PEQSSMAKGLRSGSGSRGGHHLA*EGGGKW
Trigger: CCACTTTCCGCCTCCCTCCAAAGCAAGGTGGTGTCC...GCCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CTGGGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCCCTCAGATAAGCCTTTaGTCCAGTTCTAATCTCCAG +
Preference number: 5 (lower is better)
Translates to: LGLSSLVGAREPSVRLRGPQISL*SSSNLQ
Trigger: CTGGAGATTAGAACTGGACAAAAGGCTTATCTGAGG...GCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGAAGCCAGGCATGGTGTaGATGCAGCTGGACCCCGGG +
Preference number: 5 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWKPGMV*MQLDPG
Trigger: CCCGGGGTCCAGCTGCATCAACACCATGCCTGGCTT...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGAAGCCAGGCATGGTGTaGATGCAGCTGGACCCCGGG +
Preference number: 5 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGKPGMV*MQLDPG
Trigger: CCCGGGGTCCAGCTGCATCAACACCATGCCTGGCTT...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CTGGGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCCATTCATCAATGTCATaGCAGACCTGTTTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: LGLSSLVGAREPSVRLRGHSSMS*QTCLLA
Trigger: AGCCAGCAAACAGGTCTGCAATGACATTGATGAATG...GCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp AGACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCCGAATGTAGCCAACTaGGGGCCGGTGGAGCAGCCG +
Preference number: 5 (lower is better)
Translates to: RPQGLQNRVQWPKVSDQDPNVAN*GPVEQP
Trigger: CGGCTGCTCCACCGGCCCCAAGTTGGCTACATTCGG...ATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS GCA 90 bp CAGCTGTCGCAAGCATCTCCCACTCCGTCTTCATCCCGGTCTGTCTaGAGTGGGTTGGGTACTTTAGGGCAATTGTCCAACCCGTTGGGG +
Preference number: 5 (lower is better)
Translates to: QLSQASPTPSSSRSV*SGLGTLGQLSNPLG
Trigger: CCCCAACGGGTTGGACAATTGCCCTAAAGTACCCAACCCACTGCAGACAGACCGGGATGAAGACGGAGTGGGAGATGCTTGCGACAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CCA 90 bp TGTGTGCGCCCATCAGCCAGGCCTGCTTGCTGTAGGTTCACTGCATaGACTTTGCCATCTTCCCGCTGGTACCGCACCAGCACTTTGTTG +
Preference number: 5 (lower is better)
Translates to: CVRPSARPACCRFTA*TLPSSRWYRTSTLL
Trigger: CAACAAAGTGCTGGTGCGGTACCAGCGGGAAGATGGCAAAGTCCATGCAGTGAACCTACAGCAAGCAGGCCTGGCTGATGGGCGCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CCA 90 bp GTCGCAAGCATCTCCCACTCCGTCTTCATCCCGGTCTGTCTGCAGTaGGTTGGGTACTTTAGGGCAATTGTCCAACCCGTTGGGGATGCC +
Preference number: 5 (lower is better)
Translates to: VASISHSVFIPVCLQ*VGYFRAIVQPVGDA
Trigger: GGCATCCCCAACGGGTTGGACAATTGCCCTAAAGTACCCAACCCACTGCAGACAGACCGGGATGAAGACGGAGTGGGAGATGCTTGCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp GGGCTGAGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTCCTCAGATAAGCCTTTaGTCCAGTTCTAATCTCCAG +
Preference number: 5 (lower is better)
Translates to: GLSSLVGAREPSVRLRGCPQISL*SSSNLQ
Trigger: CTGGAGATTAGAACTGGACAAAAGGCTTATCTGAGG...ACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCTCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp GAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTAGACCCCAGGGTCTCCAGAACATGGGTGACCAATGCCTaGGTCTGCTCCCCTAGAATG +
Preference number: 5 (lower is better)
Translates to: EPSVRLRGCRLDPRVSRTWVTNA*VCSPRM
Trigger: CATTCTAGGGGAGCAGACCAAGGCATTGGTCACCCA...TGTTCTGGAGACCCTGGGGTCTAACCTACAGCCCCTCAGCCTAACGGATGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp GAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTAGACCCCAGGGTCTCCAGAACATCCCCGTCCACATCGTaGTCACAGGCATCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: EPSVRLRGCRLDPRVSRTSPSTS*SQASPS
Trigger: AGAAGGAGATGCCTGTGACAACGATGTGGACGGGGA...TGTTCTGGAGACCCTGGGGTCTAACCTACAGCCCCTCAGCCTAACGGATGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp AGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTACCAGCTGAGAGCTATTaGGCAGCTGAGGACAGTTGT +
Preference number: 5 (lower is better)
Translates to: SSLVGAREPSVRLRGCRLPAESY*AAEDSC
Trigger: ACAACTGTCCTCAGCTGCCAAATAGCTCTCAGCTGG...TAACCTACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS GCA 90 bp CATCAATGTCATTGCAGACCTGTTTGCTGGCTCGAGCATAGTCGATaGCCACACCAGACACTCGGGTGCCCTTGTACCCTGGAGGACAGG +
Preference number: 5 (lower is better)
Translates to: HQCHCRPVCWLEHSR*PHQTLGCPCTLEDR
Trigger: CCTGTCCTCCAGGGTACAAGGGCACCCGAGTGTCTGGTGTGGGCATCGACTATGCTCGAGCCAGCAAACAGGTCTGCAATGACATTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CCA 90 bp AATCTCCAGTCCACTGACCTCTGCTGGAGGGATCGGGGCCAGTGCTaGAAGGCCAGCATGTTGGTCACCCAGTTTACAGTCCACATACAG +
Preference number: 5 (lower is better)
Translates to: NLQSTDLCWRDRGQC*KASMLVTQFTVHIQ
Trigger: CTGTATGTGGACTGTAAACTGGGTGACCAACATGCTGGCCTTCCAGCACTGGCCCCGATCCCTCCAGCAGAGGTCAGTGGACTGGAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000142051.8
CDS-3UTR CAA 90 bp GAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTAGACCCCAGGGTCTCCAGAACAAGCACTTTGTTGATCTaGCCCACAACAGAGGCCTCC +
Preference number: 5 (lower is better)
Translates to: EPSVRLRGCRLDPRVSRTSTLLI*PTTEAS
Trigger: GGAGGCCTCTGTTGTGGGCAAGATCAACAAAGTGCT...TGTTCTGGAGACCCTGGGGTCTAACCTACAGCCCCTCAGCCTAACGGATGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGCTGGGTGACCAATGCCTaGGTCTGCTCCCCTAGAATG +
Preference number: 5 (lower is better)
Translates to: PEQSSMAKGLRSGSGSRGWVTNA*VCSPRM
Trigger: CATTCTAGGGGAGCAGACCAAGGCATTGGTCACCCA...GCCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGCTCCACTAGGATCTGGTaGAAGAGGGTGAGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: PEQSSMAKGLRSGSGSRGSTRIW*KRVSWV
Trigger: CACCCAGCTCACCCTCTTCAACCAGATCCTAGTGGA...GCCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp GGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGGCAGGGACCACATTaGAAAGACCCCACCGTGTTG +
Preference number: 5 (lower is better)
Translates to: GSPEQSSMAKGLRSGSGSRQGPH*KDPTVL
Trigger: CAACACGGTGGGGTCTTTCAAATGTGGTCCCTGCCG...GGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp AGCTCCCTGGTGGGTGCCAGAGAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTATTGTCCTCCACATTCTaGATACCATCCCCGTCAGCA +
Preference number: 5 (lower is better)
Translates to: SSLVGAREPSVRLRGCRLLSSTF*IPSPSA
Trigger: TGCTGACGGGGATGGTATCAAGAATGTGGAGGACAA...TAACCTACAGCCCCTCAGCCTAACGGATGGCTCTCTGGCACCCACCAGGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGCTCCCCGTCCACATCGTaGTCACAGGCATCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: PEQSSMAKGLRSGSGSRGSPSTS*SQASPS
Trigger: AGAAGGAGATGCCTGTGACAACGATGTGGACGGGGA...GCCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS GCA 90 bp TCTAATCTCCAGTCCACTGACCTCTGCTGGAGGGATCGGGGCCAGTaGTGGAAGGCCAGCATGTTGGTCACCCAGTTTACAGTCCACATA +
Preference number: 5 (lower is better)
Translates to: SNLQSTDLCWRDRGQ*WKASMLVTQFTVHI
Trigger: TATGTGGACTGTAAACTGGGTGACCAACATGCTGGCCTTCCAGCACTGGCCCCGATCCCTCCAGCAGAGGTCAGTGGACTGGAGATTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000142051.8
CDS GCA 90 bp CAGGATCACAGTCTGATAGGCCCGGAAGTCTGTGAGGGTAACTTCTaGACTCTCCGGGCACACATCCAGAGGGTCAACCACTGCGTCATT +
Preference number: 5 (lower is better)
Translates to: QDHSLIGPEVCEGNF*TLRAHIQRVNHCVI
Trigger: AATGACGCAGTGGTTGACCCTCTGGATGTGTGCCCGGAGAGTGCAGAAGTTACCCTCACAGACTTCCGGGCCTATCAGACTGTGATCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000136881.8
CDS CCA 90 bp ATAAGCCTTTTGTCCAGTTCTAATCTCCAGTCCACTGACCTCTGCTaGAGGGATCGGGGCCAGTGCTGGAAGGCCAGCATGTTGGTCACC +
Preference number: 5 (lower is better)
Translates to: ISLLSSSNLQSTDLC*RDRGQCWKASMLVT
Trigger: GGTGACCAACATGCTGGCCTTCCAGCACTGGCCCCGATCCCTCCAGCAGAGGTCAGTGGACTGGAGATTAGAACTGGACAAAAGGCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000142051.8
CDS-3UTR CAA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGAAAGAGGACACCACCTaGCTTTGGAGGGAGGCGGAA +
Preference number: 5 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWKEDTT*LWREAE
Trigger: TTCCGCCTCCCTCCAAAGCAAGGTGGTGTCCTCTTT...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGCTGGAAGGCCAGCATGTaGGTCACCCAGTTTACAGTC +
Preference number: 5 (lower is better)
Translates to: PEQSSMAKGLRSGSGSRGWKASM*VTQFTV
Trigger: GACTGTAAACTGGGTGACCAACATGCTGGCCTTCCA...GCCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGCCATGACACAGCGCCATaGCGTTCAAAGAGACAGTGG +
Preference number: 5 (lower is better)
Translates to: PEQSSMAKGLRSGSGSRGHDTAP*RSKRQW
Trigger: CCACTGTCTCTTTGAACGCAATGGCGCTGTGTCATG...GCCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp GGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCGCATCTCCTTCTCCATaGCCATCCGTGTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: GSPEQSSMAKGLRSGSGSASPSP*PSVSFW
Trigger: CCAGAAGGACACGGATGGCAATGGAGAAGGAGATGC...GGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGGCATCTCCTTCTCCATaGCCATCCGTGTCCTTCTGG +
Preference number: 5 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGASPSP*PSVSFW
Trigger: CCAGAAGGACACGGATGGCAATGGAGAAGGAGATGC...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp GTCAGTCCACAGCAGTCGTACCTGATCAGGGGTGTGGCCAGTATGCCACAGAGCTGTCCTGGTAACTGGTaGAGCACTACCCAGTTTGGA +
Preference number: 5 (lower is better)
Translates to: VSPQQSYLIRGVASMPQSCPGNW*STTQFG
Trigger: TCCAAACTGGGTAGTGCTCAACCAGTTACCAGGACA...GCTCTGTGGCATACTGGCCACACCCCTGATCAGGTACGACTGCTGTGGACTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136881.8
CDS CCA 90 bp GTTGTCTTGGCGAGAGTAGAGGCCAAAGAGGACACCACCTTGCTTTaGAGGGAGGCGGAAAGTGGACAAGAGGTAGATATCCCCAGCAGT +
Preference number: 5 (lower is better)
Translates to: VVLARVEAKEDTTLL*REAESGQEVDIPSS
Trigger: ACTGCTGGGGATATCTACCTCTTGTCCACTTTCCGCCTCCCTCCAAAGCAAGGTGGTGTCCTCTTTGGCCTCTACTCTCGCCAAGACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CCA 90 bp ATGTCGTCCCGAAGCTCCACTAGGATCTGGTTGAAGAGGGTGAGCTaGGTGACCAATGCCTTGGTCTGCTCCCCTAGAATGGATTGCAGT +
Preference number: 5 (lower is better)
Translates to: MSSRSSTRIWLKRVS*VTNALVCSPRMDCS
Trigger: ACTGCAATCCATTCTAGGGGAGCAGACCAAGGCATTGGTCACCCAGCTCACCCTCTTCAACCAGATCCTAGTGGAGCTTCGGGACGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CCA 90 bp ATTGGGTACCAGGCGACAGTTATCAGGCCCGGGAGGAATGTAATCTaGGACACCGTCATTGTCATCGTCCCCGTCACACTCATCTCCAAG +
Preference number: 5 (lower is better)
Translates to: IGYQATVIRPGRNVI*DTVIVIVPVTLISK
Trigger: CTTGGAGATGAGTGTGACGGGGACGATGACAATGACGGTGTCCCAGATTACATTCCTCCCGGGCCTGATAACTGTCGCCTGGTACCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp AGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCAAAGAGGACACCACCTaGCTTTGGAGGGAGGCGGAA +
Preference number: 5 (lower is better)
Translates to: RVSRTEFNGQRSPIRIWVKEDTT*LWREAE
Trigger: TTCCGCCTCCCTCCAAAGCAAGGTGGTGTCCTCTTT...GACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp GACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCCCATCGTGTGTTGTCTaGGCGAGAGTAGAGGCCAAA +
Preference number: 5 (lower is better)
Translates to: DPRVSRTEFNGQRSPIRIPSCVV*ARVEAK
Trigger: TTTGGCCTCTACTCTCGCCAAGACAACACACGATGG...GATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGAGCACTTTGTTGATCTaGCCCACAACAGAGGCCTCC +
Preference number: 5 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWSTLLI*PTTEAS
Trigger: GGAGGCCTCTGTTGTGGGCAAGATCAACAAAGTGCT...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGCGCACCAGCACTTTGTaGATCTTGCCCACAACAGAG +
Preference number: 5 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGRTSTL*ILPTTE
Trigger: CTCTGTTGTGGGCAAGATCAACAAAGTGCTGGTGCG...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp TCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGTTCACTGCATGGACTTaGCCATCTTCCCGCTGGTAC +
Preference number: 5 (lower is better)
Translates to: SRTEFNGQRSPIRIWVPWFTAWT*PSSRWY
Trigger: GTACCAGCGGGAAGATGGCAAAGTCCATGCAGTGAA...CCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTGGAAGGCCAGCATGTaGGTCACCCAGTTTACAGTC +
Preference number: 5 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGWKASM*VTQFTV
Trigger: GACTGTAAACTGGGTGACCAACATGCTGGCCTTCCA...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp GACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGTGCAGATGGAATTaGGGTCACAGCCTCCGTTGT +
Preference number: 5 (lower is better)
Translates to: DPRVSRTEFNGQRSPIRIWCRWN*GHSLRC
Trigger: ACAACGGAGGCTGTGACCCAAATTCCATCTGCACCA...GATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp TCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGAAAGACCCCACCGTGTaGGTGCAGATGGAATTTGGG +
Preference number: 5 (lower is better)
Translates to: SRTEFNGQRSPIRIWVPWKDPTV*VQMEFG
Trigger: CCCAAATTCCATCTGCACCAACACGGTGGGGTCTTT...CCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp GGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCATGACACAGCGCCATaGCGTTCAAAGAGACAGTGG +
Preference number: 5 (lower is better)
Translates to: GSPEQSSMAKGLRSGSGSHDTAP*RSKRQW
Trigger: CCACTGTCTCTTTGAACGCAATGGCGCTGTGTCATG...GGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp GAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTAGACCCCAGGGTCTCCAGAACAGTTATCAGCATCTTCTaGCCCAGAGTTGGGTGTCAA +
Preference number: 5 (lower is better)
Translates to: EPSVRLRGCRLDPRVSRTVISIF*PRVGCQ
Trigger: TTGACACCCAACTCTGGGCAAGAAGATGCTGATAAC...TGTTCTGGAGACCCTGGGGTCTAACCTACAGCCCCTCAGCCTAACGGATGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGCGAATTCTGCTGGTCCTaGTTGGGGAACAGTCGACAA +
Preference number: 5 (lower is better)
Translates to: PEQSSMAKGLRSGSGSRGEFCWS*LGNSRQ
Trigger: TTGTCGACTGTTCCCCAACAAGGACCAGCAGAATTC...GCCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGGAACATTGGGACAGTaGTCGCAGGCATCACCAAAC +
Preference number: 5 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWGTLGQ*SQASPN
Trigger: GTTTGGTGATGCCTGCGACAACTGTCCCAATGTTCC...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp GGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCGGAACATTGGGACAGTaGTCGCAGGCATCACCAAAC +
Preference number: 5 (lower is better)
Translates to: GSPEQSSMAKGLRSGSGSGTLGQ*SQASPN
Trigger: GTTTGGTGATGCCTGCGACAACTGTCCCAATGTTCC...GGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp GAGCCATCCGTTAGGCTGAGGGGCTGTAGGTTAGACCCCAGGGTCTCCAGAACATCCTTCTGGTCATTGTaGGGAACATTGGGACAGTTG +
Preference number: 5 (lower is better)
Translates to: EPSVRLRGCRLDPRVSRTSFWSL*GTLGQL
Trigger: CAACTGTCCCAATGTTCCCAACAATGACCAGAAGGA...TGTTCTGGAGACCCTGGGGTCTAACCTACAGCCCCTCAGCCTAACGGATGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGGTACTTTAGGGCAATaGTCCAACCCGTTGGGGATG +
Preference number: 5 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWGTLGQ*SNPLGM
Trigger: CATCCCCAACGGGTTGGACAATTGCCCTAAAGTACC...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGTCTGTCTGGGTAGGATaGCTCATTTCAGGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWSVWVG*LISGQL
Trigger: CAGCTGCCCTGAAATGAGCAATCCTACCCAGACAGA...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS TCA 90 bp TTGGAGGGAGGCGGAAAGTGGACAAGAGGTAGATATCCCCAGCAGTaGGTAAAGCTGTCCGAATCTTCTCTGCCACAGCTACCATCTGCC +
Preference number: 5 (lower is better)
Translates to: LEGGGKWTRGRYPQQ*VKLSESSLPQLPSA
Trigger: GGCAGATGGTAGCTGTGGCAGAGAAGATTCGGACAGCTTTACTCACTGCTGGGGATATCTACCTCTTGTCCACTTTCCGCCTCCCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS TCA 90 bp TCATCTTCACAGACATCACCCACACCGTTGCCATCTGAGTCCTTCTaGTTAGGATTGGGTACCAGGCGACAGTTATCAGGCCCGGGAGGA +
Preference number: 5 (lower is better)
Translates to: SSSQTSPTPLPSESF*LGLGTRRQLSGPGG
Trigger: TCCTCCCGGGCCTGATAACTGTCGCCTGGTACCCAATCCTAATCAGAAGGACTCAGATGGCAACGGTGTGGGTGATGTCTGTGAAGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CCA 90 bp ACTGGTCCCCGACACCATCGTTATCAGCATCTTCTTGCCCAGAGTTaGGTGTCAAAAGGCAATTGTCCTGGCATGACACAGCGCCATTGC +
Preference number: 5 (lower is better)
Translates to: TGPRHHRYQHLLAQS*VSKGNCPGMTQRHC
Trigger: GCAATGGCGCTGTGTCATGCCAGGACAATTGCCTTTTGACACCCAACTCTGGGCAAGAAGATGCTGATAACGATGGTGTCGGGGACCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp GGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCTACCGCACCAGCACTTaGTTGATCTTGCCCACAACA +
Preference number: 5 (lower is better)
Translates to: GSPEQSSMAKGLRSGSGSYRTST*LILPTT
Trigger: TGTTGTGGGCAAGATCAACAAAGTGCTGGTGCGGTA...GGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp AGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCAAAGACCCCACCGTGTaGGTGCAGATGGAATTTGGG +
Preference number: 5 (lower is better)
Translates to: RVSRTEFNGQRSPIRIWVKDPTV*VQMEFG
Trigger: CCCAAATTCCATCTGCACCAACACGGTGGGGTCTTT...GACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCTGCTTGCAGTGCTaGTTGTTATCCATGCAGGGA +
Preference number: 5 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGSCLQC*LLSMQG
Trigger: TCCCTGCATGGATAACAACAAGCACTGCAAGCAGGA...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029682.11
CDS-3UTR CAA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTTGTCCTCCACATTCTaGATACCATCCCCGTCAGCA +
Preference number: 5 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGLSSTF*IPSPSA
Trigger: TGCTGACGGGGATGGTATCAAGAATGTGGAGGACAA...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp GACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTTCTGCTGGTCCTTGTaGGGGAACAGTCGACAATTG +
Preference number: 5 (lower is better)
Translates to: DPRVSRTEFNGQRSPIRIFCWSL*GNSRQL
Trigger: CAATTGTCGACTGTTCCCCAACAAGGACCAGCAGAA...GATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGAATTCTGCTGGTCCTaGTTGGGGAACAGTCGACAA +
Preference number: 5 (lower is better)
Translates to: PRVSRTEFNGQRSPIRIWEFCWS*LGNSRQ
Trigger: TTGTCGACTGTTCCCCAACAAGGACCAGCAGAATTC...CCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp GACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTCATTGTTGGGAACATaGGGACAGTTGTCGCAGGCA +
Preference number: 5 (lower is better)
Translates to: DPRVSRTEFNGQRSPIRISLLGT*GQLSQA
Trigger: TGCCTGCGACAACTGTCCCAATGTTCCCAACAATGA...GATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCATTGTTGGGAACATaGGGACAGTTGTCGCAGGCA +
Preference number: 5 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGSLLGT*GQLSQA
Trigger: TGCCTGCGACAACTGTCCCAATGTTCCCAACAATGA...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp AGACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCCAGCTGAGAGCTATTaGGCAGCTGAGGACAGTTGT +
Preference number: 5 (lower is better)
Translates to: RPQGLQNRVQWPKVSDQDPAESY*AAEDSC
Trigger: ACAACTGTCCTCAGCTGCCAAATAGCTCTCAGCTGG...ATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGATTTCCATGCCCTGGTaGAGCACTACCCAGTTTGGA +
Preference number: 5 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGISMPW*STTQFG
Trigger: TCCAAACTGGGTAGTGCTCAACCAGGGCATGGAAAT...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp GACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCATTTCCATGCCCTGGTaGAGCACTACCCAGTTTGGA +
Preference number: 5 (lower is better)
Translates to: DPRVSRTEFNGQRSPIRIISMPW*STTQFG
Trigger: TCCAAACTGGGTAGTGCTCAACCAGGGCATGGAAAT...GATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS TCA 90 bp ATTGTCATCGTCCCCGTCACACTCATCTCCAAGCCCGTCATTGTCTaGGTCCAGCTGAGAGCTATTTGGCAGCTGAGGACAGTTGTCCTT +
Preference number: 5 (lower is better)
Translates to: IVIVPVTLISKPVIV*VQLRAIWQLRTVVL
Trigger: AAGGACAACTGTCCTCAGCTGCCAAATAGCTCTCAGCTGGACTCAGACAATGACGGGCTTGGAGATGAGTGTGACGGGGACGATGACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS GCA 90 bp TCGTCATCACACTGGTCCCCGACACCATCGTTATCAGCATCTTCTTaGCCAGAGTTGGGTGTCAAAAGGCAATTGTCCTGCTTGCAGTGC +
Preference number: 5 (lower is better)
Translates to: SSSHWSPTPSLSASS*PELGVKRQLSCLQC
Trigger: GCACTGCAAGCAGGACAATTGCCTTTTGACACCCAACTCTGGGCAAGAAGATGCTGATAACGATGGTGTCGGGGACCAGTGTGATGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029682.11
CDS-3UTR CAA 90 bp AGACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATTACCGCACCAGCACTTaGTTGATCTTGCCCACAACA +
Preference number: 5 (lower is better)
Translates to: RPQGLQNRVQWPKVSDQDYRTST*LILPTT
Trigger: TGTTGTGGGCAAGATCAACAAAGTGCTGGTGCGGTA...ATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTGCTTGCAGTGCTTGTaGTTATCCATGCAGGGAAGA +
Preference number: 5 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGCLQCL*LSMQGR
Trigger: TCTTCCCTGCATGGATAACAACAAGCACTGCAAGCA...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029682.11
CDS-3UTR CAA 90 bp GGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCTCTTCTTGCCCAGAGTaGGGTGTCAAAAGGCAATTG +
Preference number: 5 (lower is better)
Translates to: GSPEQSSMAKGLRSGSGSSSCPE*GVKRQL
Trigger: CAATTGCCTTTTGACACCCAACTCTGGGCAAGAAGA...GGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCTTCTGGTCATTGTaGGGAACATTGGGACAGTTG +
Preference number: 5 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGSFWSL*GTLGQL
Trigger: CAACTGTCCCAATGTTCCCAACAATGACCAGAAGGA...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp AGACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATGTGTCCTTCTGGTCATaGTTGGGAACATTGGGACAG +
Preference number: 5 (lower is better)
Translates to: RPQGLQNRVQWPKVSDQDVSFWS*LGTLGQ
Trigger: CTGTCCCAATGTTCCCAACAATGACCAGAAGGACAC...ATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS GCA 90 bp GGACAGTTGTCGCAGGCATCACCAAACGAGTCTGTGTCTGAATTCTaGTGGTCCTTGTTGGGGAACAGTCGACAATTGTCCTCCACATTC +
Preference number: 5 (lower is better)
Translates to: GQLSQASPNESVSEF*WSLLGNSRQLSSTF
Trigger: GAATGTGGAGGACAATTGTCGACTGTTCCCCAACAAGGACCAGCAGAATTCAGACACAGACTCGTTTGGTGATGCCTGCGACAACTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS GCA 90 bp TCGTCATCACACTGGTCCCCGACACCATCGTTATCAGCATCTTCTTaGCCAGAGTTGGGTGTCAAAAGGCAATTGTCCTGGCATGACACA +
Preference number: 5 (lower is better)
Translates to: SSSHWSPTPSLSASS*PELGVKRQLSWHDT
Trigger: TGTGTCATGCCAGGACAATTGCCTTTTGACACCCAACTCTGGGCAAGAAGATGCTGATAACGATGGTGTCGGGGACCAGTGTGATGACGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp TCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGCATTCATCAATGTCATaGCAGACCTGTTTGCTGGCT +
Preference number: 5 (lower is better)
Translates to: SRTEFNGQRSPIRIWVPWHSSMS*QTCLLA
Trigger: AGCCAGCAAACAGGTCTGCAATGACATTGATGAATG...CCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp AGACCCCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATGGGTCACAGCCTCCGTaGTTACCATCATTACATTCA +
Preference number: 5 (lower is better)
Translates to: RPQGLQNRVQWPKVSDQDGSQPP*LPSLHS
Trigger: TGAATGTAATGATGGTAACAACGGAGGCTGTGACCC...ATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp AGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCGGGTCACAGCCTCCGTaGTTACCATCATTACATTCA +
Preference number: 5 (lower is better)
Translates to: RVSRTEFNGQRSPIRIWVGSQPP*LPSLHS
Trigger: TGAATGTAATGATGGTAACAACGGAGGCTGTGACCC...GACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp AGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCGTTATCAGCATCTTCTaGCCCAGAGTTGGGTGTCAA +
Preference number: 5 (lower is better)
Translates to: RVSRTEFNGQRSPIRIWVVISIF*PRVGCQ
Trigger: TTGACACCCAACTCTGGGCAAGAAGATGCTGATAAC...GACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGTCCCGTGGCCATCGGTACTGGAGATaGGACCAAATGATGTTTTCT +
Preference number: 5 (lower is better)
Translates to: PEQSSMAKGLRSGSGSRGHRYWR*DQMMFS
Trigger: AGAAAACATCATTTGGTCCAATCTCCAGTACCGATG...GCCACGGGACCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS TCA 90 bp AACATTGGGACAGTTGTCGCAGGCATCACCAAACGAGTCTGTGTCTaGATTCTGCTGGTCCTTGTTGGGGAACAGTCGACAATTGTCCTC +
Preference number: 5 (lower is better)
Translates to: NIGTVVAGITKRVCV*ILLVLVGEQSTIVL
Trigger: GAGGACAATTGTCGACTGTTCCCCAACAAGGACCAGCAGAATTCAGACACAGACTCGTTTGGTGATGCCTGCGACAACTGTCCCAATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CCA 90 bp CAGTTGTCGCAGGCATCACCAAACGAGTCTGTGTCTGAATTCTGCTaGTCCTTGTTGGGGAACAGTCGACAATTGTCCTCCACATTCTTG +
Preference number: 5 (lower is better)
Translates to: QLSQASPNESVSEFC*SLLGNSRQLSSTFL
Trigger: CAAGAATGTGGAGGACAATTGTCGACTGTTCCCCAACAAGGACCAGCAGAATTCAGACACAGACTCGTTTGGTGATGCCTGCGACAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS-3UTR CAA 90 bp CCAGGGTCTCCAGAACAGAGTTCAATGGCCAAAGGTCTCCGATCAGGATCTGGGCATCGGTACTGGAGATaGGACCAAATGATGTTTTCT +
Preference number: 5 (lower is better)
Translates to: PGSPEQSSMAKGLRSGSGHRYWR*DQMMFS
Trigger: AGAAAACATCATTTGGTCCAATCTCCAGTACCGATG...CCCAGATCCTGATCGGAGACCTTTGGCCATTGAACTCTGTTCTGGAGACCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CCA 90 bp ACTGGTCCCCGACACCATCGTTATCAGCATCTTCTTGCCCAGAGTTaGGTGTCAAAAGGCAATTGTCCTGCTTGCAGTGCTTGTTGTTAT +
Preference number: 5 (lower is better)
Translates to: TGPRHHRYQHLLAQS*VSKGNCPACSACCY
Trigger: ATAACAACAAGCACTGCAAGCAGGACAATTGCCTTTTGACACCCAACTCTGGGCAAGAAGATGCTGATAACGATGGTGTCGGGGACCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029682.11
CDS CCA 72 bp CGGGTGCCCTTGTACCCTGGAGGACAGGCCTCGCAGTaGAAGCCAGGCATGGTGTTGATGCAGCTGGACCCC +
Preference number: 6 (lower is better)
Translates to: RVPLYPGGQASQ*KPGMVLMQLDP
Trigger: GGGGTCCAGCTGCATCAACACCATGCCTGGCTTCCACTGCGAGGCCTGTCCTCCAGGGTACAAGGGCACCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CAA 72 bp GGAGGACAGGCCTCGCAGTGGAAGCCAGGCATGGTGTaGATGCAGCTGGACCCCGGGAAACAGGGGTCAGCG +
Preference number: 6 (lower is better)
Translates to: GGQASQWKPGMV*MQLDPGKQGSA
Trigger: CGCTGACCCCTGTTTCCCGGGGTCCAGCTGCATCAACACCATGCCTGGCTTCCACTGCGAGGCCTGTCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS GCA 72 bp GAGAAGGTCCTCGGAGTCGCAGGAGAGCCGTGTGTGTaGGCCCATCAGCCAGGCCTGCTTGCTGTAGGTTCA +
Preference number: 6 (lower is better)
Translates to: EKVLGVAGEPCV*AHQPGLLAVGS
Trigger: TGAACCTACAGCAAGCAGGCCTGGCTGATGGGCGCACACACACGGCTCTCCTGCGACTCCGAGGACCTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000142051.8
CDS GCA 72 bp CTCGAGCATAGTCGATGCCCACACCAGACACTCGGGTaGCCTTGTACCCTGGAGGACAGGCCTCGCAGTGGA +
Preference number: 6 (lower is better)
Translates to: LEHSRCPHQTLG*PCTLEDRPRSG
Trigger: TCCACTGCGAGGCCTGTCCTCCAGGGTACAAGGGCACCCGAGTGTCTGGTGTGGGCATCGACTATGCTCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS GCA 72 bp CCGGAGGTGCTCACCTGGGCCAGATATGGATGTCACTaGCTTGAGCTGAAGCCCTGGTTGGGCCACTGCTCG +
Preference number: 6 (lower is better)
Translates to: PEVLTWARYGCH*LELKPWLGHCS
Trigger: CGAGCAGTGGCCCAACCAGGGCTTCAGCTCAAGGCAGTGACATCCATATCTGGCCCAGGTGAGCACCTCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS GCA 72 bp CCCGCTGGTACCGCACCAGCACCTGAAGGTCCTGACTaGCACACGTGTAAGAGCAGAGGAGGAGGAGAGCCA +
Preference number: 6 (lower is better)
Translates to: PAGTAPAPEGPD*HTCKSRGGGEP
Trigger: TGGCTCTCCTCCTCCTCTGCTCTTACACGTGTGGCAGTCAGGACCTTCAGGTGCTGGTGCGGTACCAGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142051.8
CDS CCA 72 bp CCAGTTTACAGTCCACATACAGCTGCAGGCCAGGGCTaGGTCGAGAAGGTCCTCGGAGTCGCAGGAGAGCCG +
Preference number: 6 (lower is better)
Translates to: PVYSPHTAAGQG*VEKVLGVAGEP
Trigger: CGGCTCTCCTGCGACTCCGAGGACCTTCTCGACCCAGCCCTGGCCTGCAGCTGTATGTGGACTGTAAACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000142051.8
CDS CCA 72 bp ACACTTCCATACAGTCCACGCCTCGGAAGCAGGGGCTaGGGCTGCAGTGTGAACGCTGCTCGTGGAAACCGC +
Preference number: 6 (lower is better)
Translates to: TLPYSPRLGSRG*GCSVNAARGNR
Trigger: GCGGTTTCCACGAGCAGCGTTCACACTGCAGCCCCAGCCCCTGCTTCCGAGGCGTGGACTGTATGGAAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CCA 72 bp TGGTGTCCTGGTGCCCGTCTCCGTCGCTGTCTTCGTTaGTGTCACAGACATCCCCCACCAGGTCGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: WCPGARLRRCLR*CHRHPPPGRCL
Trigger: CAGACAGCGACCTGGTGGGGGATGTCTGTGACACCAACGAAGACAGCGACGGAGACGGGCACCAGGACACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CAA 90 bp GACCTCTGCTGGAGGGATCGGGGCCAGTGCTGGAAGGCCAGCATGTaGGTCACCCAGTTTACAGTCCACATACAGCTGCAGGCCAGGGCT +
Preference number: 6 (lower is better)
Translates to: DLCWRDRGQCWKASM*VTQFTVHIQLQARA
Trigger: AGCCCTGGCCTGCAGCTGTATGTGGACTGTAAACTGGGTGACCAACATGCTGGCCTTCCAGCACTGGCCCCGATCCCTCCAGCAGAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000142051.8
CDS TCA 72 bp TCACCTGGGCCAGATATGGATGTCACTGCCTTGAGCTaGAGCCCTGGTTGGGCCACTGCTCGGAAAGGCGTG +
Preference number: 6 (lower is better)
Translates to: SPGPDMDVTALS*SPGWATARKGV
Trigger: CACGCCTTTCCGAGCAGTGGCCCAACCAGGGCTTCAGCTCAAGGCAGTGACATCCATATCTGGCCCAGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000136881.8
CDS TCA 72 bp GGTGCTCACCTGGGCCAGATATGGATGTCACTGCCTTaGGCTGAAGCCCTGGTTGGGCCACTGCTCGGAAAG +
Preference number: 6 (lower is better)
Translates to: GAHLGQIWMSLP*AEALVGPLLGK
Trigger: CTTTCCGAGCAGTGGCCCAACCAGGGCTTCAGCTCAAGGCAGTGACATCCATATCTGGCCCAGGTGAGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS GCA 72 bp CAGTCCACTGACCTCTGCTGGAGGGATCGGGGCCAGTaGTGGAAGGCCAGCATGTTGGTCACCCAGTTTACA +
Preference number: 6 (lower is better)
Translates to: QSTDLCWRDRGQ*WKASMLVTQFT
Trigger: TGTAAACTGGGTGACCAACATGCTGGCCTTCCAGCACTGGCCCCGATCCCTCCAGCAGAGGTCAGTGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000142051.8
CDS GCA 72 bp CCCAGCCCACGTTACACTGGCATGACACAGCGCCATTaGGTTCAAAGAGACAGTGGGCGTGGATGTGGCAGG +
Preference number: 6 (lower is better)
Translates to: PSPRYTGMTQRH*VQRDSGRGCGR
Trigger: CCTGCCACATCCACGCCCACTGTCTCTTTGAACGCAATGGCGCTGTGTCATGCCAGTGTAACGTGGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029682.11
CDS CCA 72 bp CCATCAGCCAGGCCTGCTTGCTGTAGGTTCACTGCATaGACTTTGCCATCTTCCCGCTGGTACCGCACCAGC +
Preference number: 6 (lower is better)
Translates to: PSARPACCRFTA*TLPSSRWYRTS
Trigger: GCTGGTGCGGTACCAGCGGGAAGATGGCAAAGTCCATGCAGTGAACCTACAGCAAGCAGGCCTGGCTGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000142051.8
CDS CCA 72 bp GGAGGGATCGGGGCCAGTGCTGGAAGGCCAGCATGTTaGTCACCCAGTTTACAGTCCACATACAGCTGCAGG +
Preference number: 6 (lower is better)
Translates to: GGIGASAGRPAC*SPSLQSTYSCR
Trigger: CCTGCAGCTGTATGTGGACTGTAAACTGGGTGACCAACATGCTGGCCTTCCAGCACTGGCCCCGATCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000142051.8
CDS CCA 72 bp TCCACTGACCTCTGCTGGAGGGATCGGGGCCAGTGCTaGAAGGCCAGCATGTTGGTCACCCAGTTTACAGTC +
Preference number: 6 (lower is better)
Translates to: STDLCWRDRGQC*KASMLVTQFTV
Trigger: GACTGTAAACTGGGTGACCAACATGCTGGCCTTCCAGCACTGGCCCCGATCCCTCCAGCAGAGGTCAGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000142051.8
CDS CAA 72 bp GCCCAGCCCACGTTACACTGGCATGACACAGCGCCATaGCGTTCAAAGAGACAGTGGGCGTGGATGTGGCAG +
Preference number: 6 (lower is better)
Translates to: AQPTLHWHDTAP*RSKRQWAWMWQ
Trigger: CTGCCACATCCACGCCCACTGTCTCTTTGAACGCAATGGCGCTGTGTCATGCCAGTGTAACGTGGGCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000029682.11
CDS TCA 72 bp TTGATGCAGCTGGACCCCGGGAAACAGGGGTCAGCGTaGGCACACTCGTTGATGTCATCACAGTGGGTGCCA +
Preference number: 6 (lower is better)
Translates to: LMQLDPGKQGSA*AHSLMSSQWVP
Trigger: TGGCACCCACTGTGATGACATCAACGAGTGTGCTCACGCTGACCCCTGTTTCCCGGGGTCCAGCTGCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS GCA 72 bp AGAGCCGTGTGTGTGCGCCCATCAGCCAGGCCTGCTTaGTGTAGGTTCACTGCATGGACTTTGCCATCTTCC +
Preference number: 6 (lower is better)
Translates to: RAVCVRPSARPA*CRFTAWTLPSS
Trigger: GGAAGATGGCAAAGTCCATGCAGTGAACCTACAGCAAGCAGGCCTGGCTGATGGGCGCACACACACGGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000142051.8
CDS GCA 72 bp CATTGCAGACCTGTTTGCTGGCTCGAGCATAGTCGATaGCCACACCAGACACTCGGGTGCCCTTGTACCCTG +
Preference number: 6 (lower is better)
Translates to: HCRPVCWLEHSR*PHQTLGCPCTL
Trigger: CAGGGTACAAGGGCACCCGAGTGTCTGGTGTGGGCATCGACTATGCTCGAGCCAGCAAACAGGTCTGCAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CAA 72 bp GCCAGGCCTGCTTGCTGTAGGTTCACTGCATGGACTTaGCCATCTTCCCGCTGGTACCGCACCAGCACTTTG +
Preference number: 6 (lower is better)
Translates to: ARPACCRFTAWT*PSSRWYRTSTL
Trigger: CAAAGTGCTGGTGCGGTACCAGCGGGAAGATGGCAAAGTCCATGCAGTGAACCTACAGCAAGCAGGCCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CAA 72 bp CGGTCTGTCTGCAGTGGGTTGGGTACTTTAGGGCAATaGTCCAACCCGTTGGGGATGCCATCCCCGTCCACA +
Preference number: 6 (lower is better)
Translates to: RSVCSGLGTLGQ*SNPLGMPSPST
Trigger: TGTGGACGGGGATGGCATCCCCAACGGGTTGGACAATTGCCCTAAAGTACCCAACCCACTGCAGACAGACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CAA 72 bp CCCACTCCGTCTTCATCCCGGTCTGTCTGCAGTGGGTaGGGTACTTTAGGGCAATTGTCCAACCCGTTGGGG +
Preference number: 6 (lower is better)
Translates to: PTPSSSRSVCSG*GTLGQLSNPLG
Trigger: CCCCAACGGGTTGGACAATTGCCCTAAAGTACCCAACCCACTGCAGACAGACCGGGATGAAGACGGAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CAA 90 bp CAAGCATCTCCCACTCCGTCTTCATCCCGGTCTGTCTGCAGTGGGTaGGGTACTTTAGGGCAATTGTCCAACCCGTTGGGGATGCCATCC +
Preference number: 6 (lower is better)
Translates to: QASPTPSSSRSVCSG*GTLGQLSNPLGMPS
Trigger: GGATGGCATCCCCAACGGGTTGGACAATTGCCCTAAAGTACCCAACCCACTGCAGACAGACCGGGATGAAGACGGAGTGGGAGATGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS GCA 72 bp AGTCTGATAGGCCCGGAAGTCTGTGAGGGTAACTTCTaGACTCTCCGGGCACACATCCAGAGGGTCAACCAC +
Preference number: 6 (lower is better)
Translates to: SLIGPEVCEGNF*TLRAHIQRVNH
Trigger: GTGGTTGACCCTCTGGATGTGTGCCCGGAGAGTGCAGAAGTTACCCTCACAGACTTCCGGGCCTATCAGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
ENSMUST00000136881.8
CDS CCA 72 bp CAGGCGACAGTTATCAGGCCCGGGAGGAATGTAATCTaGGACACCGTCATTGTCATCGTCCCCGTCACACTC +
Preference number: 6 (lower is better)
Translates to: QATVIRPGRNVI*DTVIVIVPVTL
Trigger: GAGTGTGACGGGGACGATGACAATGACGGTGTCCCAGATTACATTCCTCCCGGGCCTGATAACTGTCGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CAA 72 bp TCTTCCCGCTGGTACCGCACCAGCACTTTGTTGATCTaGCCCACAACAGAGGCCTCCAGCCATCGTGTGTTG +
Preference number: 6 (lower is better)
Translates to: SSRWYRTSTLLI*PTTEASSHRVL
Trigger: CAACACACGATGGCTGGAGGCCTCTGTTGTGGGCAAGATCAACAAAGTGCTGGTGCGGTACCAGCGGGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CAA 90 bp GTTGATCTTGCCCACAACAGAGGCCTCCAGCCATCGTGTGTTGTCTaGGCGAGAGTAGAGGCCAAAGAGGACACCACCTTGCTTTGGAGG +
Preference number: 6 (lower is better)
Translates to: VDLAHNRGLQPSCVV*ARVEAKEDTTLLWR
Trigger: CCTCCAAAGCAAGGTGGTGTCCTCTTTGGCCTCTACTCTCGCCAAGACAACACACGATGGCTGGAGGCCTCTGTTGTGGGCAAGATCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CAA 90 bp GGATTGCAGTGCGCTGGTCACTGCATTGTGAATGGAGTCGTCTCCTaGGAATGGACATTCACTCAGGGCTCCTACCCGAGCCATGGATCC +
Preference number: 6 (lower is better)
Translates to: GLQCAGHCIVNGVVS*EWTFTQGSYPSHGS
Trigger: GGATCCATGGCTCGGGTAGGAGCCCTGAGTGAATGTCCATTCCAAGGAGACGACTCCATTCACAATGCAGTGACCAGCGCACTGCAATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CAA 90 bp TCTTCATCCCGGTCTGTCTGCAGTGGGTTGGGTACTTTAGGGCAATaGTCCAACCCGTTGGGGATGCCATCCCCGTCCACATCGTTGTCA +
Preference number: 6 (lower is better)
Translates to: SSSRSVCSGLGTLGQ*SNPLGMPSPSTSLS
Trigger: TGACAACGATGTGGACGGGGATGGCATCCCCAACGGGTTGGACAATTGCCCTAAAGTACCCAACCCACTGCAGACAGACCGGGATGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS TCA 72 bp GCACACCTGACACTCCATGATGGTGTTCCGGATGAGTaGCATTTCCTTCACCTGGTCTCGGATGTCGTCCCG +
Preference number: 6 (lower is better)
Translates to: AHLTLHDGVPDE*HFLHLVSDVVP
Trigger: CGGGACGACATCCGAGACCAGGTGAAGGAAATGTCACTCATCCGGAACACCATCATGGAGTGTCAGGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS TCA 72 bp GTCCCCGTCACACTCATCTCCAAGCCCGTCATTGTCTaGGTCCAGCTGAGAGCTATTTGGCAGCTGAGGACA +
Preference number: 6 (lower is better)
Translates to: VPVTLISKPVIV*VQLRAIWQLRT
Trigger: TGTCCTCAGCTGCCAAATAGCTCTCAGCTGGACTCAGACAATGACGGGCTTGGAGATGAGTGTGACGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS GCA 72 bp CCACTGTCAGCAGGTCAATTACCTGAAGGTCCTGACTaGCACACGTGTAAGAGCAGAGGAGGAGGAGAGCCA +
Preference number: 6 (lower is better)
Translates to: PLSAGQLPEGPD*HTCKSRGGGEP
Trigger: TGGCTCTCCTCCTCCTCTGCTCTTACACGTGTGGCAGTCAGGACCTTCAGGTAATTGACCTGCTGACAGTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CCA 72 bp CGAAGCTCCACTAGGATCTGGTTGAAGAGGGTGAGCTaGGTGACCAATGCCTTGGTCTGCTCCCCTAGAATG +
Preference number: 6 (lower is better)
Translates to: RSSTRIWLKRVS*VTNALVCSPRM
Trigger: CATTCTAGGGGAGCAGACCAAGGCATTGGTCACCCAGCTCACCCTCTTCAACCAGATCCTAGTGGAGCTTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CAA 72 bp GTCTTGGCGAGAGTAGAGGCCAAAGAGGACACCACCTaGCTTTGGAGGGAGGCGGAAAGTGGACAAGAGGTA +
Preference number: 6 (lower is better)
Translates to: VLARVEAKEDTT*LWREAESGQEV
Trigger: TACCTCTTGTCCACTTTCCGCCTCCCTCCAAAGCAAGGTGGTGTCCTCTTTGGCCTCTACTCTCGCCAAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CAA 72 bp TGCGCTGGTCACTGCATTGTGAATGGAGTCGTCTCCTaGGAATGGACATTCACTCAGGGCTCCTACCCGAGC +
Preference number: 6 (lower is better)
Translates to: CAGHCIVNGVVS*EWTFTQGSYPS
Trigger: GCTCGGGTAGGAGCCCTGAGTGAATGTCCATTCCAAGGAGACGACTCCATTCACAATGCAGTGACCAGCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CAA 90 bp TGTTGTCTTGGCGAGAGTAGAGGCCAAAGAGGACACCACCTTGCTTaGGAGGGAGGCGGAAAGTGGACAAGAGGTAGATATCCCCAGCAG +
Preference number: 6 (lower is better)
Translates to: CCLGESRGQRGHHLA*EGGGKWTRGRYPQQ
Trigger: CTGCTGGGGATATCTACCTCTTGTCCACTTTCCGCCTCCCTCCAAAGCAAGGTGGTGTCCTCTTTGGCCTCTACTCTCGCCAAGACAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CAA 90 bp TCGTGTGTTGTCTTGGCGAGAGTAGAGGCCAAAGAGGACACCACCTaGCTTTGGAGGGAGGCGGAAAGTGGACAAGAGGTAGATATCCCC +
Preference number: 6 (lower is better)
Translates to: SCVVLARVEAKEDTT*LWREAESGQEVDIP
Trigger: GGGGATATCTACCTCTTGTCCACTTTCCGCCTCCCTCCAAAGCAAGGTGGTGTCCTCTTTGGCCTCTACTCTCGCCAAGACAACACACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS GCA 72 bp CAAGCATCTCCCACTCCGTCTTCATCCCGGTCTGTCTaGAGTGGGTTGGGTACTTTAGGGCAATTGTCCAAC +
Preference number: 6 (lower is better)
Translates to: QASPTPSSSRSV*SGLGTLGQLSN
Trigger: GTTGGACAATTGCCCTAAAGTACCCAACCCACTGCAGACAGACCGGGATGAAGACGGAGTGGGAGATGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS GCA 72 bp TCAAAAGGCAATTGTCCTGGCATGACACAGCGCCATTaGGTTCAAAGAGACAGTGGGCGTGGATGTGGCAGG +
Preference number: 6 (lower is better)
Translates to: SKGNCPGMTQRH*VQRDSGRGCGR
Trigger: CCTGCCACATCCACGCCCACTGTCTCTTTGAACGCAATGGCGCTGTGTCATGCCAGGACAATTGCCTTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119084.2
CDS CCA 72 bp GGTCACTGCATTGTGAATGGAGTCGTCTCCTTGGAATaGACATTCACTCAGGGCTCCTACCCGAGCCATGGA +
Preference number: 6 (lower is better)
Translates to: GHCIVNGVVSLE*TFTQGSYPSHG
Trigger: TCCATGGCTCGGGTAGGAGCCCTGAGTGAATGTCCATTCCAAGGAGACGACTCCATTCACAATGCAGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CCA 72 bp CCTTGGTCTGCTCCCCTAGAATGGATTGCAGTGCGCTaGTCACTGCATTGTGAATGGAGTCGTCTCCTTGGA +
Preference number: 6 (lower is better)
Translates to: PWSAPLEWIAVR*SLHCEWSRLLG
Trigger: TCCAAGGAGACGACTCCATTCACAATGCAGTGACCAGCGCACTGCAATCCATTCTAGGGGAGCAGACCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CCA 72 bp ATCTCCCACTCCGTCTTCATCCCGGTCTGTCTGCAGTaGGTTGGGTACTTTAGGGCAATTGTCCAACCCGTT +
Preference number: 6 (lower is better)
Translates to: ISHSVFIPVCLQ*VGYFRAIVQPV
Trigger: AACGGGTTGGACAATTGCCCTAAAGTACCCAACCCACTGCAGACAGACCGGGATGAAGACGGAGTGGGAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CAA 72 bp GGCGAGAGTAGAGGCCAAAGAGGACACCACCTTGCTTaGGAGGGAGGCGGAAAGTGGACAAGAGGTAGATAT +
Preference number: 6 (lower is better)
Translates to: GESRGQRGHHLA*EGGGKWTRGRY
Trigger: ATATCTACCTCTTGTCCACTTTCCGCCTCCCTCCAAAGCAAGGTGGTGTCCTCTTTGGCCTCTACTCTCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CAA 72 bp GTCAAAAGGCAATTGTCCTGGCATGACACAGCGCCATaGCGTTCAAAGAGACAGTGGGCGTGGATGTGGCAG +
Preference number: 6 (lower is better)
Translates to: VKRQLSWHDTAP*RSKRQWAWMWQ
Trigger: CTGCCACATCCACGCCCACTGTCTCTTTGAACGCAATGGCGCTGTGTCATGCCAGGACAATTGCCTTTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119084.2
CDS CAA 90 bp TCTGCACTCTCCGGGCACACATCCAGAGGGTCAACCACTGCGTCATaGTCAAAGTCATCTTCACAGACATCACCCACACCGTTGCCATCT +
Preference number: 6 (lower is better)
Translates to: SALSGHTSRGSTTAS*SKSSSQTSPTPLPS
Trigger: AGATGGCAACGGTGTGGGTGATGTCTGTGAAGATGACTTTGACAATGACGCAGTGGTTGACCCTCTGGATGTGTGCCCGGAGAGTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS TCA 72 bp CAGACATCACCCACACCGTTGCCATCTGAGTCCTTCTaGTTAGGATTGGGTACCAGGCGACAGTTATCAGGC +
Preference number: 6 (lower is better)
Translates to: QTSPTPLPSESF*LGLGTRRQLSG
Trigger: GCCTGATAACTGTCGCCTGGTACCCAATCCTAATCAGAAGGACTCAGATGGCAACGGTGTGGGTGATGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS GCA 72 bp AAAGCTGTCCGAATCTTCTCTGCCACAGCTACCATCTaGCTGGATTCGCCCACTGTCAGCAGGTCAATTACC +
Preference number: 6 (lower is better)
Translates to: KAVRIFSATATI*LDSPTVSRSIT
Trigger: GGTAATTGACCTGCTGACAGTGGGCGAATCCAGGCAGATGGTAGCTGTGGCAGAGAAGATTCGGACAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CCA 72 bp CTGTCCGAATCTTCTCTGCCACAGCTACCATCTGCCTaGATTCGCCCACTGTCAGCAGGTCAATTACCTGAA +
Preference number: 6 (lower is better)
Translates to: LSESSLPQLPSA*IRPLSAGQLPE
Trigger: TTCAGGTAATTGACCTGCTGACAGTGGGCGAATCCAGGCAGATGGTAGCTGTGGCAGAGAAGATTCGGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CCA 72 bp TGTAGGTTCACTGCATGGACTTTGCCATCTTCCCGCTaGTACCGCACCAGCACTTTGTTGATCTTGCCCACA +
Preference number: 6 (lower is better)
Translates to: CRFTAWTLPSSR*YRTSTLLILPT
Trigger: TGTGGGCAAGATCAACAAAGTGCTGGTGCGGTACCAGCGGGAAGATGGCAAAGTCCATGCAGTGAACCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CAA 90 bp ATCGTCATCACACTGGTCCCCGACACCATCGTTATCAGCATCTTCTaGCCCAGAGTTGGGTGTCAAAAGGCAATTGTCCTGCTTGCAGTG +
Preference number: 6 (lower is better)
Translates to: IVITLVPDTIVISIF*PRVGCQKAIVLLAV
Trigger: CACTGCAAGCAGGACAATTGCCTTTTGACACCCAACTCTGGGCAAGAAGATGCTGATAACGATGGTGTCGGGGACCAGTGTGATGACGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000029682.11
CDS TCA 72 bp GGCGGAAAGTGGACAAGAGGTAGATATCCCCAGCAGTaGGTAAAGCTGTCCGAATCTTCTCTGCCACAGCTA +
Preference number: 6 (lower is better)
Translates to: GGKWTRGRYPQQ*VKLSESSLPQL
Trigger: TAGCTGTGGCAGAGAAGATTCGGACAGCTTTACTCACTGCTGGGGATATCTACCTCTTGTCCACTTTCCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS TCA 72 bp ACAGTTGTCGCAGGCATCACCAAACGAGTCTGTGTCTaGATTCTGCTGGTCCTTGTTGGGGAACAGTCGACA +
Preference number: 6 (lower is better)
Translates to: TVVAGITKRVCV*ILLVLVGEQST
Trigger: TGTCGACTGTTCCCCAACAAGGACCAGCAGAATTCAGACACAGACTCGTTTGGTGATGCCTGCGACAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS TCA 72 bp GTCATCTTCACAGACATCACCCACACCGTTGCCATCTaGGTCCTTCTGATTAGGATTGGGTACCAGGCGACA +
Preference number: 6 (lower is better)
Translates to: VIFTDITHTVAI*VLLIRIGYQAT
Trigger: TGTCGCCTGGTACCCAATCCTAATCAGAAGGACTCAGATGGCAACGGTGTGGGTGATGTCTGTGAAGATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS GCA 72 bp TCGCAGGCATCACCAAACGAGTCTGTGTCTGAATTCTaGTGGTCCTTGTTGGGGAACAGTCGACAATTGTCC +
Preference number: 6 (lower is better)
Translates to: SQASPNESVSEF*WSLLGNSRQLS
Trigger: GGACAATTGTCGACTGTTCCCCAACAAGGACCAGCAGAATTCAGACACAGACTCGTTTGGTGATGCCTGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CCA 72 bp GAATGGATTGCAGTGCGCTGGTCACTGCATTGTGAATaGAGTCGTCTCCTTGGAATGGACATTCACTCAGGG +
Preference number: 6 (lower is better)
Translates to: EWIAVRWSLHCE*SRLLGMDIHSG
Trigger: CCCTGAGTGAATGTCCATTCCAAGGAGACGACTCCATTCACAATGCAGTGACCAGCGCACTGCAATCCATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CCA 72 bp CAGGCATCACCAAACGAGTCTGTGTCTGAATTCTGCTaGTCCTTGTTGGGGAACAGTCGACAATTGTCCTCC +
Preference number: 6 (lower is better)
Translates to: QASPNESVSEFC*SLLGNSRQLSS
Trigger: GGAGGACAATTGTCGACTGTTCCCCAACAAGGACCAGCAGAATTCAGACACAGACTCGTTTGGTGATGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CAA 72 bp TTGGGTGTCAAAAGGCAATTGTCCTGCTTGCAGTGCTaGTTGTTATCCATGCAGGGAAGAGCCTGGTCCGGA +
Preference number: 6 (lower is better)
Translates to: LGVKRQLSCLQC*LLSMQGRAWSG
Trigger: TCCGGACCAGGCTCTTCCCTGCATGGATAACAACAAGCACTGCAAGCAGGACAATTGCCTTTTGACACCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029682.11
CDS CAA 72 bp ACACTGGTCCCCGACACCATCGTTATCAGCATCTTCTaGCCCAGAGTTGGGTGTCAAAAGGCAATTGTCCTG +
Preference number: 6 (lower is better)
Translates to: TLVPDTIVISIF*PRVGCQKAIVL
Trigger: CAGGACAATTGCCTTTTGACACCCAACTCTGGGCAAGAAGATGCTGATAACGATGGTGTCGGGGACCAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CCA 72 bp CGACACCATCGTTATCAGCATCTTCTTGCCCAGAGTTaGGTGTCAAAAGGCAATTGTCCTGCTTGCAGTGCT +
Preference number: 6 (lower is better)
Translates to: RHHRYQHLLAQS*VSKGNCPACSA
Trigger: AGCACTGCAAGCAGGACAATTGCCTTTTGACACCCAACTCTGGGCAAGAAGATGCTGATAACGATGGTGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029682.11
CDS CCA 72 bp CGACACCATCGTTATCAGCATCTTCTTGCCCAGAGTTaGGTGTCAAAAGGCAATTGTCCTGGCATGACACAG +
Preference number: 6 (lower is better)
Translates to: RHHRYQHLLAQS*VSKGNCPGMTQ
Trigger: CTGTGTCATGCCAGGACAATTGCCTTTTGACACCCAACTCTGGGCAAGAAGATGCTGATAACGATGGTGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000119084.2
CDS CAA 72 bp GAATTCTGCTGGTCCTTGTTGGGGAACAGTCGACAATaGTCCTCCACATTCTTGATACCATCCCCGTCAGCA +
Preference number: 6 (lower is better)
Translates to: EFCWSLLGNSRQ*SSTFLIPSPSA
Trigger: TGCTGACGGGGATGGTATCAAGAATGTGGAGGACAATTGTCGACTGTTCCCCAACAAGGACCAGCAGAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CAA 72 bp GTGTCCTTCTGGTCATTGTTGGGAACATTGGGACAGTaGTCGCAGGCATCACCAAACGAGTCTGTGTCTGAA +
Preference number: 6 (lower is better)
Translates to: VSFWSLLGTLGQ*SQASPNESVSE
Trigger: TTCAGACACAGACTCGTTTGGTGATGCCTGCGACAACTGTCCCAATGTTCCCAACAATGACCAGAAGGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CAA 90 bp CAGGCATCACCAAACGAGTCTGTGTCTGAATTCTGCTGGTCCTTGTaGGGGAACAGTCGACAATTGTCCTCCACATTCTTGATACCATCC +
Preference number: 6 (lower is better)
Translates to: QASPNESVSEFCWSL*GNSRQLSSTFLIPS
Trigger: GGATGGTATCAAGAATGTGGAGGACAATTGTCGACTGTTCCCCAACAAGGACCAGCAGAATTCAGACACAGACTCGTTTGGTGATGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CAA 72 bp GCATCTTCTTGCCCAGAGTTGGGTGTCAAAAGGCAATaGTCCTGCTTGCAGTGCTTGTTGTTATCCATGCAG +
Preference number: 6 (lower is better)
Translates to: ASSCPELGVKRQ*SCLQCLLLSMQ
Trigger: CTGCATGGATAACAACAAGCACTGCAAGCAGGACAATTGCCTTTTGACACCCAACTCTGGGCAAGAAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000029682.11
CDS CAA 72 bp CCAAACGAGTCTGTGTCTGAATTCTGCTGGTCCTTGTaGGGGAACAGTCGACAATTGTCCTCCACATTCTTG +
Preference number: 6 (lower is better)
Translates to: PNESVSEFCWSL*GNSRQLSSTFL
Trigger: CAAGAATGTGGAGGACAATTGTCGACTGTTCCCCAACAAGGACCAGCAGAATTCAGACACAGACTCGTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS CCA 72 bp TTTGAAAGACCCCACCGTGTTGGTGCAGATGGAATTTaGGTCACAGCCTCCGTTGTTACCATCATTACATTC +
Preference number: 6 (lower is better)
Translates to: FERPHRVGADGI*VTASVVTIITF
Trigger: GAATGTAATGATGGTAACAACGGAGGCTGTGACCCAAATTCCATCTGCACCAACACGGTGGGGTCTTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2
CDS GCA 72 bp CTCCGTTGTTACCATCATTACATTCATCAATGTCATTaGAGACCTGTTTGCTGGCTCGAGCATAGTCGATGC +
Preference number: 6 (lower is better)
Translates to: LRCYHHYIHQCH*RPVCWLEHSRC
Trigger: GCATCGACTATGCTCGAGCCAGCAAACAGGTCTGCAATGACATTGATGAATGTAATGATGGTAACAACGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000029682.11
ENSMUST00000119084.2