RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for THBS2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000023885

Ensembl transcript IDs: ENSMUST00000170872.3

Found 259 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCAGGTATGCTTTCCACACTGCCCAACCCAGGCAGGCAGCTGAAATaGACATTGCCTCTGCTGAGGTTTTCTTCTGAAAGCTCTGAGAAG +
Preference number: 1 (lower is better)
Translates to: PGMLSTLPNPGRQLK*TLPLLRFSSESSEK
Trigger: CTTCTCAGAGCTTTCAGAAGAAAACCTCAGCAGAGGCAATGTCCATTTCAGCTGCCTGCCTGGGTTGGGCAGTGTGGAAAGCATACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR TCA 90 bp TCACATCGCTCCCACCACCTTGTACCATTGAACCAAATGCCCAAGTaGGAGCCTAAATGTTCTTCACACCCTCATGGCCAGAAGTCTCCT +
Preference number: 1 (lower is better)
Translates to: SHRSHHLVPLNQMPK*EPKCSSHPHGQKSP
Trigger: AGGAGACTTCTGGCCATGAGGGTGTGAAGAACATTTAGGCTCTCACTTGGGCATTTGGTTCAATGGTACAAGGTGGTGGGAGCGATGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR CCA 90 bp TTCAAATCACTGGACAAGGGGCCACAGTCTCACATGACTGTCTTCTaGCCTCTTCCTTACTGCAGCCGAGTTCACCTGATCTTTCTTCCT +
Preference number: 1 (lower is better)
Translates to: FKSLDKGPQSHMTVF*PLPYCSRVHLIFLP
Trigger: AGGAAGAAAGATCAGGTGAACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCCTTGTCCAGTGATTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR GCA 90 bp AACTTATTTGCCAGTCTGTTTCCTAGCAGCAGGGACAGGAAAGGATaGCCAGACAAAGATCCTAGCAGTCAGTATGCAGAGTATGCAGAG +
Preference number: 1 (lower is better)
Translates to: NLFASLFPSSRDRKG*PDKDPSSQYAEYAE
Trigger: CTCTGCATACTCTGCATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCCTGCTGCTAGGAAACAGACTGGCAAATAAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR CCA 90 bp CTCATATCTCATCCAAATGTTTTCCAGCAGCAGGCTGGAAGCTCTTaGAGTGCAATTGATGTTTCTCCTTTGAAGACACTTGGACTTGGT +
Preference number: 1 (lower is better)
Translates to: LISHPNVFQQQAGSS*SAIDVSPLKTLGLG
Trigger: ACCAAGTCCAAGTGTCTTCAAAGGAGAAACATCAATTGCACTCCAAGAGCTTCCAGCCTGCTGCTGGAAAACATTTGGATGAGATATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR GCA 90 bp ACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTaGAGGATAACAAGAAACAAGGAAACTCACCCTCAGAGATTTCAA +
Preference number: 1 (lower is better)
Translates to: TCAGLGNTVPQKSKK*RITRNKETHPQRFQ
Trigger: TTGAAATCTCTGAGGGTGAGTTTCCTTGTTTCTTGTTATCCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR-3UTR TCA 90 bp GCATCTGCCAACTTATTTGCCAGTCTGTTTCCTAGCAGCAGGGACAGGAAAGGAGGCCACAGTCTCACATaGCTGTCTTCTGGCCTCTTC +
Preference number: 2 (lower is better)
Translates to: ASANLFASLFPSSRDRKGGHSLT*LSSGLF
Trigger: GAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCC...TCCTTTCCTGTCCCTGCTGCTAGGAAACAGACTGGCAAATAAGTTGGCAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR-3UTR CCA 90 bp GGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTCAGGCTGGAAGCTCTTaGAGTGCAATTGATGTTTCT +
Preference number: 2 (lower is better)
Translates to: GATVSHDCLLASSLLQPSQAGSS*SAIDVS
Trigger: AGAAACATCAATTGCACTCCAAGAGCTTCCAGCCTG...ACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR-3UTR GCA 90 bp AAGGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGACAGAAAAGCCACAAGTaGCAAGATGGACTGATGTGT +
Preference number: 2 (lower is better)
Translates to: KGPQSHMTVFWPLPYCSRQKSHK*QDGLMC
Trigger: ACACATCAGTCCATCTTGGCACTTGTGGCTTTTCTG...TCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR-3UTR TCA 90 bp CTAGCAGCAGGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGGGACATTGCCTCTGCTaGGGTTTTCTTCTGAAAGCT +
Preference number: 2 (lower is better)
Translates to: LAAGTGKDAQTKILAVSMGHCLC*GFLLKA
Trigger: AGCTTTCAGAAGAAAACCTCAGCAGAGGCAATGTCC...CATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCCTGCTGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR-3UTR CCA 90 bp CTAGCAGCAGGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGAATGTTTCAAATCACTaGACAAGGGGCCACAGTCTC +
Preference number: 2 (lower is better)
Translates to: LAAGTGKDAQTKILAVSMNVSNH*TRGHSL
Trigger: GAGACTGTGGCCCCTTGTCCAGTGATTTGAAACATT...CATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCCTGCTGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR-3UTR TCA 90 bp GGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCAGAGTATGCTACAGCTGGAACCCTaGAATATTCCCCTTTCAAAG +
Preference number: 2 (lower is better)
Translates to: GTGKDAQTKILAVSMQSMLQLEP*NIPLSK
Trigger: CTTTGAAAGGGGAATATTTCAGGGTTCCAGCTGTAG...CATACTCTGCATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR-3UTR CCA 90 bp CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGCACATGACTGTCTTCTaGCCTCTTCCTTACTGCAGC +
Preference number: 2 (lower is better)
Translates to: LTCAGLGNTVPQKSKKCRHMTVF*PLPYCS
Trigger: GCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTG...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR-3UTR TCA 90 bp GCATCTGCCAACTTATTTGCCAGTCTGTTTCCTAGCAGCAGGGACAGGAAAGGAAGCACTGAGGGTAAGTaGGCCATATTTTTCATGCTT +
Preference number: 2 (lower is better)
Translates to: ASANLFASLFPSSRDRKGSTEGK*AIFFML
Trigger: AAGCATGAAAAATATGGCTCACTTACCCTCAGTGCT...TCCTTTCCTGTCCCTGCTGCTAGGAAACAGACTGGCAAATAAGTTGGCAGATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR-3UTR TCA 90 bp CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGTTGATGTTTCTCCTTTaGAGACACTTGGACTTGGTG +
Preference number: 2 (lower is better)
Translates to: LTCAGLGNTVPQKSKKCRLMFLL*RHLDLV
Trigger: CACCAAGTCCAAGTGTCTTCAAAGGAGAAACATCAA...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR-3UTR CCA 90 bp CGAGTTCACCTGATCTTTCTTCCTGTTCAGCCTCACAGGATTTGTGTGTCATTACCACAAGTGCCAAGATaGACTGATGTGTCTAAGAAG +
Preference number: 2 (lower is better)
Translates to: RVHLIFLPVQPHRICVSLPQVPR*TDVSKK
Trigger: CTTCTTAGACACATCAGTCCATCTTGGCACTTGTGG...TAATGACACACAAATCCTGTGAGGCTGAACAGGAAGAAAGATCAGGTGAACTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR-3UTR TCA 90 bp TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTACAGGAAATGCCAAATaGCAGAAAAGCCACAAGTGC +
Preference number: 2 (lower is better)
Translates to: YSPFKGCSFFVSVESALTTGNAK*QKSHKC
Trigger: GCACTTGTGGCTTTTCTGTCATTTGGCATTTCCTGT...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR-3UTR GCA 90 bp GATCAAAATCGTGGATTCTTTCTGTCTAACTTAGAAATGCAGTTGCCATTACTACCTGCTGGGAGATCATaGAGCTTAAAGCAAAACAAA +
Preference number: 2 (lower is better)
Translates to: DQNRGFFLSNLEMQLPLLPAGRS*SLKQNK
Trigger: TTTGTTTTGCTTTAAGCTGCATGATCTCCCAGCAGG...TAGTAATGGCAACTGCATTTCTAAGTTAGACAGAAAGAATCCACGATTTTGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR-3UTR CCA 90 bp GATAACAAGAAACAAGGAAACTCACCCTCAGAGATTTCAACACAAATAACTCCAATGCATTACCAAATTTaGCAAAAGCAGCTTTTGCAT +
Preference number: 2 (lower is better)
Translates to: DNKKQGNSPSEISTQITPMHYQI*QKQLLH
Trigger: ATGCAAAAGCTGCTTTTGCCAAATTTGGTAATGCAT...TGGAGTTATTTGTGTTGAAATCTCTGAGGGTGAGTTTCCTTGTTTCTTGTTATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR CCA 72 bp CTGGACAAGGGGCCACAGTCTCACATGACTGTCTTCTaGCCTCTTCCTTACTGCAGCCGAGTTCACCTGATC +
Preference number: 3 (lower is better)
Translates to: LDKGPQSHMTVF*PLPYCSRVHLI
Trigger: GATCAGGTGAACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCCTTGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR CCA 72 bp CTTTCCACACTGCCCAACCCAGGCAGGCAGCTGAAATaGACATTGCCTCTGCTGAGGTTTTCTTCTGAAAGC +
Preference number: 3 (lower is better)
Translates to: LSTLPNPGRQLK*TLPLLRFSSES
Trigger: GCTTTCAGAAGAAAACCTCAGCAGAGGCAATGTCCATTTCAGCTGCCTGCCTGGGTTGGGCAGTGTGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR-3UTR CAA 90 bp CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGGGTGTTTGCAGCACATaGCTGGAGCTGGAGCCCTGC +
Preference number: 3 (lower is better)
Translates to: LTCAGLGNTVPQKSKKCRGVCST*LELEPC
Trigger: GCAGGGCTCCAGCTCCAGCAATGTGCTGCAAACACC...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR-3UTR CAA 90 bp GATCCTAGCAGTCAGTATGCAGAGTATGCAGAGCCTGATGACGTCCAGCCAGGTAAGGATGCAGCTTCTTaGTCTCTGTCGAGTCAGCTT +
Preference number: 3 (lower is better)
Translates to: DPSSQYAEYAEPDDVQPGKDAAS*SLSSQL
Trigger: AAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTT...ACCTGGCTGGACGTCATCAGGCTCTGCATACTCTGCATACTGACTGCTAGGATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR TCA 72 bp TCCCACCACCTTGTACCATTGAACCAAATGCCCAAGTaGGAGCCTAAATGTTCTTCACACCCTCATGGCCAG +
Preference number: 3 (lower is better)
Translates to: SHHLVPLNQMPK*EPKCSSHPHGQ
Trigger: CTGGCCATGAGGGTGTGAAGAACATTTAGGCTCTCACTTGGGCATTTGGTTCAATGGTACAAGGTGGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR GCA 72 bp CAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTaGAGCCGAGTTCACCTGATCTTTCTTCCTGTTCAG +
Preference number: 3 (lower is better)
Translates to: QSHMTVFWPLPY*SRVHLIFLPVQ
Trigger: CTGAACAGGAAGAAAGATCAGGTGAACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR-3UTR CAA 90 bp GGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCAGAGTATGCAGCTGAAATGGACATaGCCTCTGCTGAGGTTTTCT +
Preference number: 3 (lower is better)
Translates to: GTGKDAQTKILAVSMQSMQLKWT*PLLRFS
Trigger: AGAAAACCTCAGCAGAGGCAATGTCCATTTCAGCTG...CATACTCTGCATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR TCA 72 bp CTGGAAGCTCTTGGAGTGCAATTGATGTTTCTCCTTTaGAGACACTTGGACTTGGTGCTGATGAAGGAGGTG +
Preference number: 3 (lower is better)
Translates to: LEALGVQLMFLL*RHLDLVLMKEV
Trigger: CACCTCCTTCATCAGCACCAAGTCCAAGTGTCTTCAAAGGAGAAACATCAATTGCACTCCAAGAGCTTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR TCA 72 bp GAATGTATTCACATCGCTCCCACCACCTTGTACCATTaGACCAAATGCCCAAGTGAGAGCCTAAATGTTCTT +
Preference number: 3 (lower is better)
Translates to: ECIHIAPTTLYH*TKCPSESLNVL
Trigger: AAGAACATTTAGGCTCTCACTTGGGCATTTGGTTCAATGGTACAAGGTGGTGGGAGCGATGTGAATACATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR CCA 72 bp CATCCAAATGTTTTCCAGCAGCAGGCTGGAAGCTCTTaGAGTGCAATTGATGTTTCTCCTTTGAAGACACTT +
Preference number: 3 (lower is better)
Translates to: HPNVFQQQAGSS*SAIDVSPLKTL
Trigger: AAGTGTCTTCAAAGGAGAAACATCAATTGCACTCCAAGAGCTTCCAGCCTGCTGCTGGAAAACATTTGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR-3UTR CAA 90 bp GATAACAAGAAACAAGGAAACTCACCCTCAGAGATTTCAACACAAATAACTCCACATCTGCCAACTTATTaGCCAGTCTGTTTCCTAGCA +
Preference number: 3 (lower is better)
Translates to: DNKKQGNSPSEISTQITPHLPTY*PVCFLA
Trigger: TGCTAGGAAACAGACTGGCAAATAAGTTGGCAGATG...TGGAGTTATTTGTGTTGAAATCTCTGAGGGTGAGTTTCCTTGTTTCTTGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR-3UTR CAA 90 bp GATCAAAATCGTGGATTCTTTCTGTCTAACTTAGAAATGCAGTTGCCATTACTAAATGCATTACCAAATTaGGCAAAAGCAGCTTTTGCA +
Preference number: 3 (lower is better)
Translates to: DQNRGFFLSNLEMQLPLLNALPN*AKAAFA
Trigger: TGCAAAAGCTGCTTTTGCCAAATTTGGTAATGCATT...TAGTAATGGCAACTGCATTTCTAAGTTAGACAGAAAGAATCCACGATTTTGATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp GGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTGGTAACTGTGCAGGCTaGCCAAGGGGACCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: GATVSHDCLLASSLLQPSGNCAG*PRGPGA
Trigger: AGCCCCTGGTCCCCTTGGTCAGCCTGCACAGTTACC...ACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR GCA 90 bp AAGGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAACTGCCTCTGGGAGGTaGCGGGGCCTTCCAACACCA +
Preference number: 4 (lower is better)
Translates to: KGPQSHMTVFWPLPYCSRTASGR*RGLPTP
Trigger: TGGTGTTGGAAGGCCCCGGCACCTCCCAGAGGCAGT...TCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp AAGGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGGCAGGTGTTGCTGGTaGCATCACAAGACCGGCCTC +
Preference number: 4 (lower is better)
Translates to: KGPQSHMTVFWPLPYCSRGRCCW*HHKTGL
Trigger: GAGGCCGGTCTTGTGATGTCACCAGCAACACCTGCC...TCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR GCA 90 bp GGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTCGAGACTTGCGGTCCTaGTTCAGTTGGGCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: GATVSHDCLLASSLLQPSRDLRS*FSWAVR
Trigger: CCTCACAGCCCAACTGAAGCAGGACCGCAAGTCTCG...ACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp GCTCGGTCTTCGCTCCACGGTGAGCCTCATATCTCATCCAAATGTTTTCCAGCAGACCGGCCTCTCTGCTaGGTCCCAGAGCCACAGGTG +
Preference number: 4 (lower is better)
Translates to: ARSSLHGEPHISSKCFPADRPLC*VPEPQV
Trigger: CACCTGTGGCTCTGGGACCCAGCAGAGAGGCCGGTC...TGCTGGAAAACATTTGGATGAGATATGAGGCTCACCGTGGAGCGAAGACCGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp GGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTCCCCTTGTAGCGTGGTaGACAAGGCAGGCAGTGGAA +
Preference number: 4 (lower is better)
Translates to: GATVSHDCLLASSLLQPSPLVAW*TRQAVE
Trigger: TTCCACTGCCTGCCTTGTCCACCACGCTACAAGGGG...ACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR GCA 90 bp GCTCGGTCTTCGCTCCACGGTGAGCCTCATATCTCATCCAAATGTTTTCCAGCAGCGTTCCCCGAGACTTaGGGTCCTGCTTCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: ARSSLHGEPHISSKCFPAAFPET*GPASVG
Trigger: CCCAACTGAAGCAGGACCGCAAGTCTCGGGGAACGC...TGCTGGAAAACATTTGGATGAGATATGAGGCTCACCGTGGAGCGAAGACCGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR GCA 90 bp ACGGTGAGCCTCATATCTCATCCAAATGTTTTCCAGCAGCAGGCTGGAAGCTCTCAAGACCGGCCTCTCTaGTGGGTCCCAGAGCCACAG +
Preference number: 4 (lower is better)
Translates to: TVSLISHPNVFQQQAGSSQDRPL*WVPEPQ
Trigger: CTGTGGCTCTGGGACCCAGCAGAGAGGCCGGTCTTG...AGAGCTTCCAGCCTGCTGCTGGAAAACATTTGGATGAGATATGAGGCTCACCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp GATCCTAGCAGTCAGTATGCAGAGTATGCAGAGCCTGATGACGTCCAGCCAGGTCGGTCCTGCTTCAGTTaGGCTGTGAGGAAGAAGCCC +
Preference number: 4 (lower is better)
Translates to: DPSSQYAEYAEPDDVQPGRSCFS*AVRKKP
Trigger: GGGCTTCTTCCTCACAGCCCAACTGAAGCAGGACCG...ACCTGGCTGGACGTCATCAGGCTCTGCATACTCTGCATACTGACTGCTAGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp AAGGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTCACATTCTTCCACTaGGAGTCAGCCAGGCCCACA +
Preference number: 4 (lower is better)
Translates to: KGPQSHMTVFWPLPYCSRVTFFH*ESARPT
Trigger: TGTGGGCCTGGCTGACTCCCAGTGGAAGAATGTGAC...TCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp AAGGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAATGTCCTTGTCTGAATaGAGGGGCCCAGGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: KGPQSHMTVFWPLPYCSRMSLSE*RGPGRC
Trigger: ACACCTGCCTGGGCCCCTCCATTCAGACAAGGACAT...TCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp GGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTTCCAGGTCCTCACAGTaGGTACCATTGCCCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GATVSHDCLLASSLLQPSSRSSQ*VPLPRK
Trigger: CTTTCTGGGCAATGGTACCCACTGTGAGGACCTGGA...ACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp AAGGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGACTTCTACCCAGTAGTTaGGGTCCAAAGTGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: KGPQSHMTVFWPLPYCSRLLPSS*GPKCPL
Trigger: CAGGGGACACTTTGGACCTCAACTACTGGGTAGAAG...TCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp GGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTTTGCAGGTGAGCAGGTaGTCTGATGGCAGACTGTTT +
Preference number: 4 (lower is better)
Translates to: GATVSHDCLLASSLLQPSLQVSR*SDGRLF
Trigger: AAACAGTCTGCCATCAGATCACCTGCTCACCTGCAA...ACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR GCA 90 bp CTAGCAGCAGGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGTGCCCTTGCAGTTCTTaGCACCCATCTGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: LAAGTGKDAQTKILAVSMCPCSS*HPSGAL
Trigger: CAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCA...CATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCCTGCTGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR GCA 90 bp AAGGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTCTGTGTCGATCTGTaGTGGGTTGTGCACATAGGG +
Preference number: 4 (lower is better)
Translates to: KGPQSHMTVFWPLPYCSRVCVDL*WVVHIG
Trigger: CCCTATGTGCACAACCCAGCACAGATCGACACAGAC...TCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp GCATCTGCCAACTTATTTGCCAGTCTGTTTCCTAGCAGCAGGGACAGGAAAGGAGCCCTCGGAACTGCTTaGCACCGATGGTCTTCCGGT +
Preference number: 4 (lower is better)
Translates to: ASANLFASLFPSSRDRKGALGTA*HRWSSG
Trigger: ACCGGAAGACCATCGGTGCCAAGCAGTTCCGAGGGC...TCCTTTCCTGTCCCTGCTGCTAGGAAACAGACTGGCAAATAAGTTGGCAGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp GATCCTAGCAGTCAGTATGCAGAGTATGCAGAGCCTGATGACGTCCAGCCAGGTCCGTCCGAGTCTTCCTaGTCTGGGTTGAACACAAGC +
Preference number: 4 (lower is better)
Translates to: DPSSQYAEYAEPDDVQPGPSESS*SGLNTS
Trigger: GCTTGTGTTCAACCCAGACCAGGAAGACTCGGACGG...ACCTGGCTGGACGTCATCAGGCTCTGCATACTCTGCATACTGACTGCTAGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp GGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTTTCTTGTGGCAGCTGTaGGTCTTGTCCTTACATGGA +
Preference number: 4 (lower is better)
Translates to: GATVSHDCLLASSLLQPSFLWQL*VLSLHG
Trigger: TCCATGTAAGGACAAGACTCACAGCTGCCACAAGAA...ACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGAGTCCTCCCCGCAGATaGGCCCATCACCTGCGTAGC +
Preference number: 4 (lower is better)
Translates to: LTCAGLGNTVPQKSKKCRSPPRR*AHHLRS
Trigger: GCTACGCAGGTGATGGGCTCATCTGCGGGGAGGACT...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp GGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTCTCTGCACTCATACTTaGGGTCCGAGAAATAGACCA +
Preference number: 4 (lower is better)
Translates to: GATVSHDCLLASSLLQPSLCTHT*GPRNRP
Trigger: TGGTCTATTTCTCGGACCTCAAGTATGAGTGCAGAG...ACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR GCA 90 bp GGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTCCAGGTTTCATTTTCTaGAAAGATTCGGCCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GATVSHDCLLASSLLQPSPGFIF*KDSALL
Trigger: CAGGAGGGCCGAATCTTTGCAGAAAATGAAACCTGG...ACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp CTAGCAGCAGGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCTCGAGATGCACCTTTaGCCACGTACATCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LAAGTGKDAQTKILAVSMLEMHL*PRTSCS
Trigger: GGAGCAGGATGTACGTGGCCAAAGGTGCATCTCGAG...CATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCCTGCTGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR CAA 72 bp ACACTGCCCAACCCAGGCAGGCAGCTGAAATGGACATaGCCTCTGCTGAGGTTTTCTTCTGAAAGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: TLPNPGRQLKWT*PLLRFSSESSE
Trigger: CTCAGAGCTTTCAGAAGAAAACCTCAGCAGAGGCAATGTCCATTTCAGCTGCCTGCCTGGGTTGGGCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp CCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGCTGGAGCTTCTGCAGCAAGCCCCTaGAGTGACTCTCTCGAGATG +
Preference number: 4 (lower is better)
Translates to: PRWTDVSKKGCLQHIAGASAASP*SDSLEM
Trigger: CATCTCGAGAGAGTCACTTCAGGGGCTTGCTGCAGA...AGCTCCAGCAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp GCATCTGCCAACTTATTTGCCAGTCTGTTTCCTAGCAGCAGGGACAGGAAAGGAGGCACAAGTTGCAGGTaGGCAGGTGATCTGATGGCA +
Preference number: 4 (lower is better)
Translates to: ASANLFASLFPSSRDRKGGTSCR*AGDLMA
Trigger: TGCCATCAGATCACCTGCTCACCTGCAACTTGTGCC...TCCTTTCCTGTCCCTGCTGCTAGGAAACAGACTGGCAAATAAGTTGGCAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGCTGCATGTCCTTGTCTaGATGGAGGGGCCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LTCAGLGNTVPQKSKKCRLHVLV*MEGPRQ
Trigger: CTGCCTGGGCCCCTCCATTCAGACAAGGACATGCAG...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR GCA 90 bp AAGGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGCCCTCCTTTCTCCTTaGAAGCTTGACAATCCTGTT +
Preference number: 4 (lower is better)
Translates to: KGPQSHMTVFWPLPYCSRALLSP*KLDNPV
Trigger: AACAGGATTGTCAAGCTTGCAAGGAGAAAGGAGGGC...TCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR GCA 90 bp CTAGCAGCAGGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGAGTGGCCCAGGTAGATaGACTCTGCATTCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: LAAGTGKDAQTKILAVSMSGPGR*TLHSCG
Trigger: GCCACAAGAATGCAGAGTGCATCTACCTGGGCCACT...CATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCCTGCTGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp ACGGTGAGCCTCATATCTCATCCAAATGTTTTCCAGCAGCAGGCTGGAAGCTCTTCCTTCCCTCCATACTaGGGCTCAGGGCTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: TVSLISHPNVFQQQAGSSSFPPY*GSGLLQ
Trigger: TTGCAACAGCCCTGAGCCCCAGTATGGAGGGAAGGA...AGAGCTTCCAGCCTGCTGCTGGAAAACATTTGGATGAGATATGAGGCTCACCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp GGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTGGATTGAAGAGAAGCTaGCAATTGTCCTTCTCATCG +
Preference number: 4 (lower is better)
Translates to: GATVSHDCLLASSLLQPSGLKRS*QLSFSS
Trigger: CGATGAGAAGGACAATTGCCAGCTTCTCTTCAATCC...ACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp CTAGCAGCAGGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGTGTGTCGATCTGTGCTaGGTTGTGCACATAGGGGCA +
Preference number: 4 (lower is better)
Translates to: LAAGTGKDAQTKILAVSMCVDLC*VVHIGA
Trigger: TGCCCCTATGTGCACAACCCAGCACAGATCGACACA...CATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCCTGCTGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp GATCCTAGCAGTCAGTATGCAGAGTATGCAGAGCCTGATGACGTCCAGCCAGGTGCTGAAAAGGTCAAATaGAGTGTCCTTGACGTGGTC +
Preference number: 4 (lower is better)
Translates to: DPSSQYAEYAEPDDVQPGAEKVK*SVLDVV
Trigger: GACCACGTCAAGGACACTTCATTTGACCTTTTCAGC...ACCTGGCTGGACGTCATCAGGCTCTGCATACTCTGCATACTGACTGCTAGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp GGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCAGAGTATGGCTCCCTGGCTGTGTTaGCAGCCTTTCTTGCTTAAG +
Preference number: 4 (lower is better)
Translates to: GTGKDAQTKILAVSMQSMAPWLC*QPFLLK
Trigger: CTTAAGCAAGAAAGGCTGTCAACACAGCCAGGGAGC...CATACTCTGCATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp GCATCTGCCAACTTATTTGCCAGTCTGTTTCCTAGCAGCAGGGACAGGAAAGGAAGAGACGTATGCGGGTaGCATTGCCAACTCCACAAG +
Preference number: 4 (lower is better)
Translates to: ASANLFASLFPSSRDRKGRDVCG*HCQLHK
Trigger: CTTGTGGAGTTGGCAATGTCACCCGCATACGTCTCT...TCCTTTCCTGTCCCTGCTGCTAGGAAACAGACTGGCAAATAAGTTGGCAGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR GCA 90 bp TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTACACTCGGTCCACTCTaGCCACGGAGACCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: YSPFKGCSFFVSVESALTTLGPL*PRRPAL
Trigger: GAGGGCTGGTCTCCGTGGGCAGAGTGGACCGAGTGT...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR GCA 90 bp CTAGCAGCAGGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCAGGTAGATGCACTCTaGATTCTTGTGGCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: LAAGTGKDAQTKILAVSMQVDAL*ILVAAV
Trigger: CACAGCTGCCACAAGAATGCAGAGTGCATCTACCTG...CATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCCTGCTGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp GCTCGGTCTTCGCTCCACGGTGAGCCTCATATCTCATCCAAATGTTTTCCAGCACCACAAAAGATGGGTTaGCACAAGTTGCAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: ARSSLHGEPHISSKCFPAPQKMG*HKLQVS
Trigger: GCTCACCTGCAACTTGTGCCAACCCATCTTTTGTGG...TGCTGGAAAACATTTGGATGAGATATGAGGCTCACCGTGGAGCGAAGACCGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTGCCCAGAAAGCCCACTaGGCAGGAGCCACAGGACCA +
Preference number: 4 (lower is better)
Translates to: YSPFKGCSFFVSVESALTAQKAH*AGATGP
Trigger: TGGTCCTGTGGCTCCTGCCCAGTGGGCTTTCTGGGC...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp GGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTTCATTGTTGTCACACTaGTCTCCAACGAGATCATTG +
Preference number: 4 (lower is better)
Translates to: GATVSHDCLLASSLLQPSSLLSH*SPTRSL
Trigger: CAATGATCTCGTTGGAGACCAGTGTGACAACAATGA...ACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp CTAGCAGCAGGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGTATGGGCAGTTGTCTTaGTTGTTCTGGTGGCCGTCA +
Preference number: 4 (lower is better)
Translates to: LAAGTGKDAQTKILAVSMYGQLS*LFWWPS
Trigger: TGACGGCCACCAGAACAACCAAGACAACTGCCCATA...CATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCCTGCTGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp ACGGTGAGCCTCATATCTCATCCAAATGTTTTCCAGCAGCAGGCTGGAAGCTCTTTTGTGTGGTCCCCTTaGGATCCAGAGGGACCATCT +
Preference number: 4 (lower is better)
Translates to: TVSLISHPNVFQQQAGSSFVWSP*DPEGPS
Trigger: AGATGGTCCCTCTGGATCCCAAGGGGACCACACAAA...AGAGCTTCCAGCCTGCTGCTGGAAAACATTTGGATGAGATATGAGGCTCACCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp GGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCAGAGTATGCTCCTGCACACAGGCTaGCATGTTTCTTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GTGKDAQTKILAVSMQSMLLHTG*HVSCLQ
Trigger: CTGAAGACAAGAAACATGTCAGCCTGTGTGCAGGAG...CATACTCTGCATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp TTTTTAAACAAACAAGAAAAGGCAACACAGCGGAATGCTCGGTCTTCGCTCCACTCCCAGAGCCACAGGTaGCAGAACACTCGGTCCACT +
Preference number: 4 (lower is better)
Translates to: FLNKQEKATQRNARSSLHSQSHR*QNTRST
Trigger: AGTGGACCGAGTGTTCTGTCACCTGTGGCTCTGGGA...GTGGAGCGAAGACCGAGCATTCCGCTGTGTTGCCTTTTCTTGTTTGTTTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp CACAAGTGCCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGCTTCCTGGTCTGGGTTaGACACAAGCCGACAGTTGT +
Preference number: 4 (lower is better)
Translates to: HKCQDGLMCLRRGVCSTLLPGLG*TQADSC
Trigger: ACAACTGTCGGCTTGTGTTCAACCCAGACCAGGAAG...CAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGGCACTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR GCA 90 bp CGAGTTCACCTGATCTTTCTTCCTGTTCAGCCTCACAGGATTTGTGTGTCATTAGACACAATCTCAAACTaGCTCTGGGAGGTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: RVHLIFLPVQPHRICVSLDTISN*LWEVPG
Trigger: CCCCGGCACCTCCCAGAGGCAGTTTGAGATTGTGTC...TAATGACACACAAATCCTGTGAGGCTGAACAGGAAGAAAGATCAGGTGAACTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR GCA 90 bp CACAAGTGCCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGGTGTCACTGGCCACCTaGACAGTCACATTCTTCCAC +
Preference number: 4 (lower is better)
Translates to: HKCQDGLMCLRRGVCSTLVSLAT*TVTFFH
Trigger: GTGGAAGAATGTGACTGTGCAGGTGGCCAGTGACAC...CAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGGCACTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR GCA 90 bp CCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGCTGGAGCTCATCAGGGAAGCTGTTaGACTTGGCTCCAGGAAAAC +
Preference number: 4 (lower is better)
Translates to: PRWTDVSKKGCLQHIAGAHQGSC*TWLQEN
Trigger: GTTTTCCTGGAGCCAAGTGCAACAGCTTCCCTGATG...AGCTCCAGCAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR GCA 90 bp GGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCAGAGTATGTCTGCACCAGCTCTTTaGCTTGGTGACGAATTACCC +
Preference number: 4 (lower is better)
Translates to: GTGKDAQTKILAVSMQSMSAPAL*LGDELP
Trigger: GGGTAATTCGTCACCAAGGCAAAGAGCTGGTGCAGA...CATACTCTGCATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTATCTCAAACTGCCTCTaGGAGGTGCCGGGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: YSPFKGCSFFVSVESALTISNCL*EVPGPS
Trigger: GGAAGGCCCCGGCACCTCCCAGAGGCAGTTTGAGAT...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp CCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGCTGGAGCTTCTGCAAACACGAGATaGACATTCTGCAGCAAGCCC +
Preference number: 4 (lower is better)
Translates to: PRWTDVSKKGCLQHIAGASANTR*TFCSKP
Trigger: GGGCTTGCTGCAGAATGTCCATCTCGTGTTTGCAGA...AGCTCCAGCAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp CTAGCAGCAGGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCTCTTGTTGCACATTTaGTGTTCTGTCACATCCCCG +
Preference number: 4 (lower is better)
Translates to: LAAGTGKDAQTKILAVSMLLLHI*CSVTSP
Trigger: CGGGGATGTGACAGAACACCAAATGTGCAACAAGAG...CATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCCTGCTGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTGGACAAGGCAGGCAGTaGAAGCCCGGGTTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: YSPFKGCSFFVSVESALTGQGRQ*KPGLVL
Trigger: CAACACCAACCCGGGCTTCCACTGCCTGCCTTGTCC...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp CACAAGTGCCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGCAAATGAAGTGTCCTTaGCGTGGTCACCAGCAGAAG +
Preference number: 4 (lower is better)
Translates to: HKCQDGLMCLRRGVCSTLQMKCP*RGHQQK
Trigger: CTTCTGCTGGTGACCACGTCAAGGACACTTCATTTG...CAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGGCACTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp CGAGTTCACCTGATCTTTCTTCCTGTTCAGCCTCACAGGATTTGTGTGTCATTAGCTTCAGTTGGGCTGTaGGGAAGAAGCCCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: RVHLIFLPVQPHRICVSLASVGL*GRSPPF
Trigger: GAAAGGAGGGCTTCTTCCTCACAGCCCAACTGAAGC...TAATGACACACAAATCCTGTGAGGCTGAACAGGAAGAAAGATCAGGTGAACTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGACTGTCTGCAGAGTGTaGACAGGATGGACAGCACTC +
Preference number: 4 (lower is better)
Translates to: LTCAGLGNTVPQKSKKCRTVCRV*TGWTAL
Trigger: GAGTGCTGTCCATCCTGTTCACACTCTGCAGACAGT...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTCATCTGGGGCACTGGTaGGTTGCAGAGACGTATGCG +
Preference number: 4 (lower is better)
Translates to: YSPFKGCSFFVSVESALTHLGHW*VAETYA
Trigger: CGCATACGTCTCTGCAACTCACCAGTGCCCCAGATG...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp CGAGTTCACCTGATCTTTCTTCCTGTTCAGCCTCACAGGATTTGTGTGTCATTATGGGGCAGTTGTCCTTaGTGCAGTGGTAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: RVHLIFLPVQPHRICVSLWGSCP*CSGRWH
Trigger: ATGCCACCTACCACTGCATCAAGGACAACTGCCCCA...TAATGACACACAAATCCTGTGAGGCTGAACAGGAAGAAAGATCAGGTGAACTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp GGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCAGAGTATGCATAGAAAGTGCCACTaGAGTCCACAGACCCAAACT +
Preference number: 4 (lower is better)
Translates to: GTGKDAQTKILAVSMQSMHRKCH*SPQTQT
Trigger: AGTTTGGGTCTGTGGACTTCAGTGGCACTTTCTATG...CATACTCTGCATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR GCA 90 bp TTTTTAAACAAACAAGAAAAGGCAACACAGCGGAATGCTCGGTCTTCGCTCCACGATGAGCCCATCACCTaGGTAGCCAATCTGGCACTC +
Preference number: 4 (lower is better)
Translates to: FLNKQEKATQRNARSSLHDEPIT*VANLAL
Trigger: GAGTGCCAGATTGGCTACGCAGGTGATGGGCTCATC...GTGGAGCGAAGACCGAGCATTCCGCTGTGTTGCCTTTTCTTGTTTGTTTAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR GCA 90 bp CACAAGTGCCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGTCTGAGTTTGCTGTCTaGACCAGCTCTTTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: HKCQDGLMCLRRGVCSTLSEFAV*TSSLPW
Trigger: CCAAGGCAAAGAGCTGGTGCAGACAGCAAACTCAGA...CAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGGCACTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTACCAGCAGAAGCTCTTaGCCCTATGCCCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: YSPFKGCSFFVSVESALTTSRSS*PYAQSQ
Trigger: CTGGCTCTGGGCATAGGGCCAAGAGCTTCTGCTGGT...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp GCATCTGCCAACTTATTTGCCAGTCTGTTTCCTAGCAGCAGGGACAGGAAAGGACTGATCGATCTGATCTaGGTTGTGCATCAGAGGACA +
Preference number: 4 (lower is better)
Translates to: ASANLFASLFPSSRDRKGLIDLI*VVHQRT
Trigger: TGTCCTCTGATGCACAACCCAGATCAGATCGATCAG...TCCTTTCCTGTCCCTGCTGCTAGGAAACAGACTGGCAAATAAGTTGGCAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp CCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGCTGGAGCTTCCAGCCAATGTTTTTaGGGTCATGCCATAGAGTCC +
Preference number: 4 (lower is better)
Translates to: PRWTDVSKKGCLQHIAGASSQCF*GHAIES
Trigger: GGACTCTATGGCATGACCCCAAAAACATTGGCTGGA...AGCTCCAGCAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp ACGGTGAGCCTCATATCTCATCCAAATGTTTTCCAGCAGCAGGCTGGAAGCTCTCTAATTGACGGGGATTaGAGAGAAGCTGGCAATTGT +
Preference number: 4 (lower is better)
Translates to: TVSLISHPNVFQQQAGSSLIDGD*REAGNC
Trigger: ACAATTGCCAGCTTCTCTTCAATCCCCGTCAATTAG...AGAGCTTCCAGCCTGCTGCTGGAAAACATTTGGATGAGATATGAGGCTCACCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR GCA 90 bp GGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCAGAGTATGGGCAGCTTCTCTTGTTaGACATTTGGTGTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: GTGKDAQTKILAVSMQSMGSFSC*TFGVLS
Trigger: TGACAGAACACCAAATGTGCAACAAGAGAAGCTGCC...CATACTCTGCATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp GGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCAGAGTATGCATCCTCCAGGAAGTTaGTATGCTGATTGCCTTCTA +
Preference number: 4 (lower is better)
Translates to: GTGKDAQTKILAVSMQSMHPPGS*YADCLL
Trigger: TAGAAGGCAATCAGCATACCAACTTCCTGGAGGATG...CATACTCTGCATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGGCCTTCCACAAAAGATaGGTTGGCACAAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LTCAGLGNTVPQKSKKCRAFHKR*VGTSCR
Trigger: CCTGCAACTTGTGCCAACCCATCTTTTGTGGAAGGC...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTACACCAGGTTGTTGTTaGGCCAGCCATCCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: YSPFKGCSFFVSVESALTTPGCC*ASHPGL
Trigger: CAGACCTGGATGGCTGGCCCAACAACAACCTGGTGT...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp CGAGTTCACCTGATCTTTCTTCCTGTTCAGCCTCACAGGATTTGTGTGTCATTACGAGTCTTCCTGGTCTaGGTTGAACACAAGCCGACA +
Preference number: 4 (lower is better)
Translates to: RVHLIFLPVQPHRICVSLRVFLV*VEHKPT
Trigger: TGTCGGCTTGTGTTCAACCCAGACCAGGAAGACTCG...TAATGACACACAAATCCTGTGAGGCTGAACAGGAAGAAAGATCAGGTGAACTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp TTTTTAAACAAACAAGAAAAGGCAACACAGCGGAATGCTCGGTCTTCGCTCCACAGCTCTTTGCCTTGGTaGCGAATTACCCAGTTGGGA +
Preference number: 4 (lower is better)
Translates to: FLNKQEKATQRNARSSLHSSLPW*RITQLG
Trigger: TCCCAACTGGGTAATTCGTCACCAAGGCAAAGAGCT...GTGGAGCGAAGACCGAGCATTCCGCTGTGTTGCCTTTTCTTGTTTGTTTAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp GCTCGGTCTTCGCTCCACGGTGAGCCTCATATCTCATCCAAATGTTTTCCAGCACTTACATGGATTCTCTaGCTCACACACTTGTTTTTC +
Preference number: 4 (lower is better)
Translates to: ARSSLHGEPHISSKCFPALTWIL*LTHLFF
Trigger: GAAAAACAAGTGTGTGAGCCAGAGAATCCATGTAAG...TGCTGGAAAACATTTGGATGAGATATGAGGCTCACCGTGGAGCGAAGACCGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp CACAAGTGCCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGGGAGTTGGAGATGTATaGGCAGTTGTCTTGGTTGTT +
Preference number: 4 (lower is better)
Translates to: HKCQDGLMCLRRGVCSTLGVGDV*AVVLVV
Trigger: AACAACCAAGACAACTGCCCATACATCTCCAACTCC...CAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGGCACTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp CACAAGTGCCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGGACGAATTACCCAGTTaGGATCAATTTGTGTGGTCC +
Preference number: 4 (lower is better)
Translates to: HKCQDGLMCLRRGVCSTLDELPS*DQFVWS
Trigger: GGACCACACAAATTGATCCCAACTGGGTAATTCGTC...CAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGGCACTTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR CAA 72 bp GCTGGAAGCTCTTGGAGTGCAATTGATGTTTCTCCTTaGAAGACACTTGGACTTGGTGCTGATGAAGGAGGT +
Preference number: 4 (lower is better)
Translates to: AGSSWSAIDVSP*KTLGLGADEGG
Trigger: ACCTCCTTCATCAGCACCAAGTCCAAGTGTCTTCAAAGGAGAAACATCAATTGCACTCCAAGAGCTTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGAGAAGCAAATATCTGTaGCCACAGCACACTCATCCA +
Preference number: 4 (lower is better)
Translates to: LTCAGLGNTVPQKSKKCRRSKYL*PQHTHP
Trigger: TGGATGAGTGTGCTGTGGTCACAGATATTTGCTTCT...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR TCA 90 bp CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGGTCATAAATTGGTCCTaGGTCAGCCATGACTTGCTT +
Preference number: 4 (lower is better)
Translates to: LTCAGLGNTVPQKSKKCRVINWS*VSHDLL
Trigger: AAGCAAGTCATGGCTGACTCAGGACCAATTTATGAC...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR GCA 90 bp GGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCAGAGTATGATCTTCCACAGAATCTaGAAACACGAGATGGACATT +
Preference number: 4 (lower is better)
Translates to: GTGKDAQTKILAVSMQSMIFHRI*KHEMDI
Trigger: AATGTCCATCTCGTGTTTGCAGATTCTGTGGAAGAT...CATACTCTGCATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR GCA 90 bp CCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGCTGGAGCTGTTGACAGCCTTTCTTaGTTAAGATATCTTCCACAG +
Preference number: 4 (lower is better)
Translates to: PRWTDVSKKGCLQHIAGAVDSLS*LRYLPQ
Trigger: CTGTGGAAGATATCTTAAGCAAGAAAGGCTGTCAAC...AGCTCCAGCAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR GCA 90 bp GATAACAAGAAACAAGGAAACTCACCCTCAGAGATTTCAACACAAATAACTCCACGTACACACCTCCTGTaGCTTCTCCACACCCTGGAC +
Preference number: 4 (lower is better)
Translates to: DNKKQGNSPSEISTQITPRTHLL*LLHTLD
Trigger: GTCCAGGGTGTGGAGAAGGCACAGGAGGTGTGTACG...TGGAGTTATTTGTGTTGAAATCTCTGAGGGTGAGTTTCCTTGTTTCTTGTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR GCA 90 bp TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTAAGATTCGGCCCTCCTaGACACAGGCTGACATGTTT +
Preference number: 4 (lower is better)
Translates to: YSPFKGCSFFVSVESALTKIRPS*TQADMF
Trigger: AAACATGTCAGCCTGTGTGCAGGAGGGCCGAATCTT...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp TTTTTAAACAAACAAGAAAAGGCAACACAGCGGAATGCTCGGTCTTCGCTCCACATCATCTGTGTTCACTaGGGGGATGTAGTCAAACCG +
Preference number: 4 (lower is better)
Translates to: FLNKQEKATQRNARSSLHIICVH*GDVVKP
Trigger: CGGTTTGACTACATCCCCCCAGTGAACACAGATGAT...GTGGAGCGAAGACCGAGCATTCCGCTGTGTTGCCTTTTCTTGTTTGTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGAGTCTTGTCCTTACATaGATTCTCTGGCTCACACAC +
Preference number: 4 (lower is better)
Translates to: LTCAGLGNTVPQKSKKCRSLVLT*ILWLTH
Trigger: GTGTGTGAGCCAGAGAATCCATGTAAGGACAAGACT...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR GCA 90 bp TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTCCACATAGAAGCGGCTaGTTGACTGATAGCCAAAGA +
Preference number: 4 (lower is better)
Translates to: YSPFKGCSFFVSVESALTPHRSG*LTDSQR
Trigger: TCTTTGGCTATCAGTCAAGCAGCCGCTTCTATGTGG...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR GCA 90 bp GATAACAAGAAACAAGGAAACTCACCCTCAGAGATTTCAACACAAATAACTCCAGTGACTCTCTCGAGATaGACCTTTGGCCACGTACAT +
Preference number: 4 (lower is better)
Translates to: DNKKQGNSPSEISTQITPVTLSR*TFGHVH
Trigger: ATGTACGTGGCCAAAGGTGCATCTCGAGAGAGTCAC...TGGAGTTATTTGTGTTGAAATCTCTGAGGGTGAGTTTCCTTGTTTCTTGTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp GATCAAAATCGTGGATTCTTTCTGTCTAACTTAGAAATGCAGTTGCCATTACTACATGGTCAGCCTGGTTaGAGTTGGAGATGTATGGGC +
Preference number: 4 (lower is better)
Translates to: DQNRGFFLSNLEMQLPLLHGQPG*SWRCMG
Trigger: GCCCATACATCTCCAACTCCAACCAGGCTGACCATG...TAGTAATGGCAACTGCATTTCTAAGTTAGACAGAAAGAATCCACGATTTTGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp GATAACAAGAAACAAGGAAACTCACCCTCAGAGATTTCAACACAAATAACTCCATGGGATCAATTTGTGTaGTCCCCTTGGGATCCAGAG +
Preference number: 4 (lower is better)
Translates to: DNKKQGNSPSEISTQITPWDQFV*SPWDPE
Trigger: CTCTGGATCCCAAGGGGACCACACAAATTGATCCCA...TGGAGTTATTTGTGTTGAAATCTCTGAGGGTGAGTTTCCTTGTTTCTTGTTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
3UTR CAA 72 bp TCACCTGATCTTTCTTCCTGTTCAGCCTCACAGGATTaGTGTGTCATTATAGAACAGCACGAATCCAAAAAC +
Preference number: 4 (lower is better)
Translates to: SPDLSSCSASQD*CVIIEQHESKN
Trigger: GTTTTTGGATTCGTGCTGTTCTATAATGACACACAAATCCTGTGAGGCTGAACAGGAAGAAAGATCAGGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp TTTTTAAACAAACAAGAAAAGGCAACACAGCGGAATGCTCGGTCTTCGCTCCACAGTGTTGTAGACATATaGACAATTGTCTCGCTCATT +
Preference number: 4 (lower is better)
Translates to: FLNKQEKATQRNARSSLHSVVDI*TIVSLI
Trigger: AATGAGCGAGACAATTGTCCATATGTCTACAACACT...GTGGAGCGAAGACCGAGCATTCCGCTGTGTTGCCTTTTCTTGTTTGTTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp GATAACAAGAAACAAGGAAACTCACCCTCAGAGATTTCAACACAAATAACTCCATCCAGAGGGACCATCTaGAAGTTTCTGAAGTCTGTC +
Preference number: 4 (lower is better)
Translates to: DNKKQGNSPSEISTQITPSRGTI*KFLKSV
Trigger: GACAGACTTCAGAAACTTCCAGATGGTCCCTCTGGA...TGGAGTTATTTGTGTTGAAATCTCTGAGGGTGAGTTTCCTTGTTTCTTGTTATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CCA 90 bp GATCAAAATCGTGGATTCTTTCTGTCTAACTTAGAAATGCAGTTGCCATTACTATCTTGGTTGTTCTGGTaGCCGTCATCATCTATGTCC +
Preference number: 4 (lower is better)
Translates to: DQNRGFFLSNLEMQLPLLSWLFW*PSSSMS
Trigger: GGACATAGATGATGACGGCCACCAGAACAACCAAGA...TAGTAATGGCAACTGCATTTCTAAGTTAGACAGAAAGAATCCACGATTTTGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 90 bp GGGGACCAGGGGCTCCAGCGGCCATCAATTGGGCACGGATCACGCTaGCAGGGTTTGGTTTCCCGGCCGCTGCCCTTGCAGTTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: GDQGLQRPSIGHGSR*QGLVSRPLPLQFLP
Trigger: TGGCAAGAACTGCAAGGGCAGCGGCCGGGAAACCAAACCCTGTCAGCGTGATCCGTGCCCAATTGATGGCCGCTGGAGCCCCTGGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS GCA 90 bp CACGCTGACAGGGTTTGGTTTCCCGGCCGCTGCCCTTGCAGTTCTTaGCACCCATCTGGGGCACTGGTGAGTTGCAGAGACGTATGCGGG +
Preference number: 5 (lower is better)
Translates to: HADRVWFPGRCPCSS*HPSGALVSCRDVCG
Trigger: CCCGCATACGTCTCTGCAACTCACCAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCAGCGGCCGGGAAACCAAACCCTGTCAGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS GCA 90 bp GGCACGGATCACGCTGACAGGGTTTGGTTTCCCGGCCGCTGCCCTTaGAGTTCTTGCCACCCATCTGGGGCACTGGTGAGTTGCAGAGAC +
Preference number: 5 (lower is better)
Translates to: GTDHADRVWFPGRCP*SSCHPSGALVSCRD
Trigger: GTCTCTGCAACTCACCAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCAGCGGCCGGGAAACCAAACCCTGTCAGCGTGATCCGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CCA 90 bp CCCAGGCAGGTGTTGCTGGTGACATCACAAGACCGGCCTCTCTGCTaGGTCCCAGAGCCACAGGTGACAGAACACTCGGTCCACTCTGCC +
Preference number: 5 (lower is better)
Translates to: PRQVLLVTSQDRPLC*VPEPQVTEHSVHSA
Trigger: GGCAGAGTGGACCGAGTGTTCTGTCACCTGTGGCTCTGGGACCCAGCAGAGAGGCCGGTCTTGTGATGTCACCAGCAACACCTGCCTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 90 bp TGCATGTCCTTGTCTGAATGGAGGGGCCCAGGCAGGTGTTGCTGGTaGCATCACAAGACCGGCCTCTCTGCTGGGTCCCAGAGCCACAGG +
Preference number: 5 (lower is better)
Translates to: CMSLSEWRGPGRCCW*HHKTGLSAGSQSHR
Trigger: CCTGTGGCTCTGGGACCCAGCAGAGAGGCCGGTCTTGTGATGTCACCAGCAACACCTGCCTGGGCCCCTCCATTCAGACAAGGACATGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS GCA 90 bp CCGGGGCCTTCCAACACCAGGAGCGTTCCCCGAGACTTGCGGTCCTaGTTCAGTTGGGCTGTGAGGAAGAAGCCCTCCTTTCTCCTTGCA +
Preference number: 5 (lower is better)
Translates to: PGPSNTRSVPRDLRS*FSWAVRKKPSFLLA
Trigger: TGCAAGGAGAAAGGAGGGCTTCTTCCTCACAGCCCAACTGAAGCAGGACCGCAAGTCTCGGGGAACGCTCCTGGTGTTGGAAGGCCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS GCA 90 bp CAATTGGGCACGGATCACGCTGACAGGGTTTGGTTTCCCGGCCGCTaGCCTTGCAGTTCTTGCCACCCATCTGGGGCACTGGTGAGTTGC +
Preference number: 5 (lower is better)
Translates to: QLGTDHADRVWFPGR*PCSSCHPSGALVSC
Trigger: GCAACTCACCAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCAGCGGCCGGGAAACCAAACCCTGTCAGCGTGATCCGTGCCCAATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CCA 90 bp ATCCTCCAGGCCAACACCGAAGGGTTGGTTCCCCTTGTAGCGTGGTaGACAAGGCAGGCAGTGGAAGCCCGGGTTGGTGTTGACACAGCG +
Preference number: 5 (lower is better)
Translates to: ILQANTEGLVPLVAW*TRQAVEARVGVDTA
Trigger: CGCTGTGTCAACACCAACCCGGGCTTCCACTGCCTGCCTTGTCCACCACGCTACAAGGGGAACCAACCCTTCGGTGTTGGCCTGGAGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 90 bp CCGGCCGCTGCCCTTGCAGTTCTTGCCACCCATCTGGGGCACTGGTaGGTTGCAGAGACGTATGCGGGTGACATTGCCAACTCCACAAGT +
Preference number: 5 (lower is better)
Translates to: PAAALAVLATHLGHW*VAETYAGDIANSTS
Trigger: ACTTGTGGAGTTGGCAATGTCACCCGCATACGTCTCTGCAACTCACCAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCAGCGGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS GCA 90 bp TTGAGGTCCAAAGTGTCCCCTGGGCCATTGGACACAATCTCAAACTaGCTCTGGGAGGTGCCGGGGCCTTCCAACACCAGGAGCGTTCCC +
Preference number: 5 (lower is better)
Translates to: LRSKVSPGPLDTISN*LWEVPGPSNTRSVP
Trigger: GGGAACGCTCCTGGTGTTGGAAGGCCCCGGCACCTCCCAGAGGCAGTTTGAGATTGTGTCCAATGGCCCAGGGGACACTTTGGACCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CCA 90 bp GGTTTGGTTTCCCGGCCGCTGCCCTTGCAGTTCTTGCCACCCATCTaGGGCACTGGTGAGTTGCAGAGACGTATGCGGGTGACATTGCCA +
Preference number: 5 (lower is better)
Translates to: GLVSRPLPLQFLPPI*GTGELQRRMRVTLP
Trigger: TGGCAATGTCACCCGCATACGTCTCTGCAACTCACCAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCAGCGGCCGGGAAACCAAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 90 bp TGCCACCCATCTGGGGCACTGGTGAGTTGCAGAGACGTATGCGGGTaGCATTGCCAACTCCACAAGTCACGGAGCATGAAGACCAGGGTG +
Preference number: 5 (lower is better)
Translates to: CHPSGALVSCRDVCG*HCQLHKSRSMKTRV
Trigger: CACCCTGGTCTTCATGCTCCGTGACTTGTGGAGTTGGCAATGTCACCCGCATACGTCTCTGCAACTCACCAGTGCCCCAGATGGGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS GCA 90 bp TCCAGCCTCCATTCTGACGGATTCTCGTATCACATTTGCCCAGGCTaGATGTCCTTGTCTGAATGGAGGGGCCCAGGCAGGTGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: SSLHSDGFSYHICPG*MSLSEWRGPGRCCW
Trigger: CCAGCAACACCTGCCTGGGCCCCTCCATTCAGACAAGGACATGCAGCCTGGGCAAATGTGATACGAGAATCCGTCAGAATGGAGGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CCA 90 bp TCCAACACCAGGAGCGTTCCCCGAGACTTGCGGTCCTGCTTCAGTTaGGCTGTGAGGAAGAAGCCCTCCTTTCTCCTTGCAAGCTTGACA +
Preference number: 5 (lower is better)
Translates to: SNTRSVPRDLRSCFS*AVRKKPSFLLASLT
Trigger: TGTCAAGCTTGCAAGGAGAAAGGAGGGCTTCTTCCTCACAGCCCAACTGAAGCAGGACCGCAAGTCTCGGGGAACGCTCCTGGTGTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp GATCCTAGCAGTCAGTATGCAGAGTATGCAGAGCCTGATGACGTCCAGCCAGGTCACCAGCAGAAGCTCTaGGCCCTATGCCCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: DPSSQYAEYAEPDDVQPGHQQKL*ALCPEP
Trigger: TGGCTCTGGGCATAGGGCCAAGAGCTTCTGCTGGTG...ACCTGGCTGGACGTCATCAGGCTCTGCATACTCTGCATACTGACTGCTAGGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp AAGGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTAGCACACACCAGGTaGTTGTTGGGCCAGCCATCC +
Preference number: 5 (lower is better)
Translates to: KGPQSHMTVFWPLPYCSRVAHTR*LLGQPS
Trigger: GGATGGCTGGCCCAACAACAACCTGGTGTGTGCTAC...TCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CCA 90 bp AAGCAAATATCTGTGACCACAGCACACTCATCCAGGTCCTCACAGTaGGTACCATTGCCCAGAAAGCCCACTGGGCAGGAGCCACAGGAC +
Preference number: 5 (lower is better)
Translates to: KQISVTTAHSSRSSQ*VPLPRKPTGQEPQD
Trigger: GTCCTGTGGCTCCTGCCCAGTGGGCTTTCTGGGCAATGGTACCCACTGTGAGGACCTGGATGAGTGTGCTGTGGTCACAGATATTTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 90 bp AAATGTCACCTCGGCCGTCACCGTCCGAGTCTTCCTGGTCTGGGTTaGACACAAGCCGACAGTTGTCCCTGTCATCTGGAACACCATCAT +
Preference number: 5 (lower is better)
Translates to: KCHLGRHRPSLPGLG*TQADSCPCHLEHHH
Trigger: ATGATGGTGTTCCAGATGACAGGGACAACTGTCGGCTTGTGTTCAACCCAGACCAGGAAGACTCGGACGGTGACGGCCGAGGTGACATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CCA 90 bp TTTACAAATGTCACCTCGGCCGTCACCGTCCGAGTCTTCCTGGTCTaGGTTGAACACAAGCCGACAGTTGTCCCTGTCATCTGGAACACC +
Preference number: 5 (lower is better)
Translates to: FTNVTSAVTVRVFLV*VEHKPTVVPVIWNT
Trigger: GGTGTTCCAGATGACAGGGACAACTGTCGGCTTGTGTTCAACCCAGACCAGGAAGACTCGGACGGTGACGGCCGAGGTGACATTTGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp AAGGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAAGGCTGACATGTTTCTaGTCTTCAGAGGGCCCCCAA +
Preference number: 5 (lower is better)
Translates to: KGPQSHMTVFWPLPYCSRRLTCF*SSEGPQ
Trigger: TTGGGGGCCCTCTGAAGACAAGAAACATGTCAGCCT...TCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp GATCCTAGCAGTCAGTATGCAGAGTATGCAGAGCCTGATGACGTCCAGCCAGGTTCCCCCTCGCCATTGTaGTCTGTGTCGATCTGTGCT +
Preference number: 5 (lower is better)
Translates to: DPSSQYAEYAEPDDVQPGSPSPL*SVSICA
Trigger: AGCACAGATCGACACAGACAACAATGGCGAGGGGGA...ACCTGGCTGGACGTCATCAGGCTCTGCATACTCTGCATACTGACTGCTAGGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 90 bp GAATCTGCAAACACGAGATGGACATTCTGCAGCAAGCCCCTGAAGTaGCTCTCTCGAGATGCACCTTTGGCCACGTACATCCTGCTCCTG +
Preference number: 5 (lower is better)
Translates to: ESANTRWTFCSKPLK*LSRDAPLATYILLL
Trigger: CAGGAGCAGGATGTACGTGGCCAAAGGTGCATCTCGAGAGAGTCACTTCAGGGGCTTGCTGCAGAATGTCCATCTCGTGTTTGCAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 90 bp CCACAGAATCTGCAAACACGAGATGGACATTCTGCAGCAAGCCCCTaGAGTGACTCTCTCGAGATGCACCTTTGGCCACGTACATCCTGC +
Preference number: 5 (lower is better)
Translates to: PQNLQTRDGHSAASP*SDSLEMHLWPRTSC
Trigger: GCAGGATGTACGTGGCCAAAGGTGCATCTCGAGAGAGTCACTTCAGGGGCTTGCTGCAGAATGTCCATCTCGTGTTTGCAGATTCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 90 bp TCCTGTGCCTTCTCCACACCCTGGACCACGAGATCTGTGGTGATGTaGGGGCTCAGATGGAGAGTCTCTGTATGTTCACTGATGGTGTTG +
Preference number: 5 (lower is better)
Translates to: SCAFSTPWTTRSVVM*GLRWRVSVCSLMVL
Trigger: CAACACCATCAGTGAACATACAGAGACTCTCCATCTGAGCCCTCACATCACCACAGATCTCGTGGTCCAGGGTGTGGAGAAGGCACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 90 bp GTGGAAGCCCGGGTTGGTGTTGACACAGCGGGGAGCTTTGTTAGTTaGGAAGCAAATATCTGTGACCACAGCACACTCATCCAGGTCCTC +
Preference number: 5 (lower is better)
Translates to: VEARVGVDTAGSFVS*EANICDHSTLIQVL
Trigger: GAGGACCTGGATGAGTGTGCTGTGGTCACAGATATTTGCTTCTCAACTAACAAAGCTCCCCGCTGTGTCAACACCAACCCGGGCTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp CACAAGTGCCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGGCGGTCCTGCTTCAGTaGGGCTGTGAGGAAGAAGCC +
Preference number: 5 (lower is better)
Translates to: HKCQDGLMCLRRGVCSTLAVLLQ*GCEEEA
Trigger: GGCTTCTTCCTCACAGCCCAACTGAAGCAGGACCGC...CAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGGCACTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp TTTTTAAACAAACAAGAAAAGGCAACACAGCGGAATGCTCGGTCTTCGCTCCACTCCCGGCCGCTGCCCTaGCAGTTCTTGCCACCCATC +
Preference number: 5 (lower is better)
Translates to: FLNKQEKATQRNARSSLHSRPLP*QFLPPI
Trigger: GATGGGTGGCAAGAACTGCAAGGGCAGCGGCCGGGA...GTGGAGCGAAGACCGAGCATTCCGCTGTGTTGCCTTTTCTTGTTTGTTTAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp ACGGTGAGCCTCATATCTCATCCAAATGTTTTCCAGCAGCAGGCTGGAAGCTCTGGGAAGCTGTTGCACTaGGCTCCAGGAAAACACGGG +
Preference number: 5 (lower is better)
Translates to: TVSLISHPNVFQQQAGSSGKLLH*APGKHG
Trigger: CCCGTGTTTTCCTGGAGCCAAGTGCAACAGCTTCCC...AGAGCTTCCAGCCTGCTGCTGGAAAACATTTGGATGAGATATGAGGCTCACCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp GCATCTGCCAACTTATTTGCCAGTCTGTTTCCTAGCAGCAGGGACAGGAAAGGACACACCAGGTTGTTGTaGGGCCAGCCATCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: ASANLFASLFPSSRDRKGHTRLL*GQPSRS
Trigger: AGACCTGGATGGCTGGCCCAACAACAACCTGGTGTG...TCCTTTCCTGTCCCTGCTGCTAGGAAACAGACTGGCAAATAAGTTGGCAGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp GATCCTAGCAGTCAGTATGCAGAGTATGCAGAGCCTGATGACGTCCAGCCAGGTTGCATCAGAGGACAATaGTCACAGTGGTCACCCACG +
Preference number: 5 (lower is better)
Translates to: DPSSQYAEYAEPDDVQPGCIRGQ*SQWSPT
Trigger: CGTGGGTGACCACTGTGACAATTGTCCTCTGATGCA...ACCTGGCTGGACGTCATCAGGCTCTGCATACTCTGCATACTGACTGCTAGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp GATCCTAGCAGTCAGTATGCAGAGTATGCAGAGCCTGATGACGTCCAGCCAGGTTCAGCCTGGTTGGAGTaGGAGATGTATGGGCAGTTG +
Preference number: 5 (lower is better)
Translates to: DPSSQYAEYAEPDDVQPGSAWLE*EMYGQL
Trigger: CAACTGCCCATACATCTCCAACTCCAACCAGGCTGA...ACCTGGCTGGACGTCATCAGGCTCTGCATACTCTGCATACTGACTGCTAGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp CTAGCAGCAGGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGTGCCAGGGTCTGAGTTaGCTGTCTGCACCAGCTCTT +
Preference number: 5 (lower is better)
Translates to: LAAGTGKDAQTKILAVSMCQGLS*LSAPAL
Trigger: AAGAGCTGGTGCAGACAGCAAACTCAGACCCTGGCA...CATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCCTGCTGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 90 bp ATGCCAGGGTCTGAGTTTGCTGTCTGCACCAGCTCTTTGCCTTGGTaGCGAATTACCCAGTTGGGATCAATTTGTGTGGTCCCCTTGGGA +
Preference number: 5 (lower is better)
Translates to: MPGSEFAVCTSSLPW*RITQLGSICVVPLG
Trigger: TCCCAAGGGGACCACACAAATTGATCCCAACTGGGTAATTCGTCACCAAGGCAAAGAGCTGGTGCAGACAGCAAACTCAGACCCTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS GCA 90 bp GTCCTGCTTCAGTTGGGCTGTGAGGAAGAAGCCCTCCTTTCTCCTTaGAAGCTTGACAATCCTGTTGAGATCATCTGTGTTCACTGGGGG +
Preference number: 5 (lower is better)
Translates to: VLLQLGCEEEALLSP*KLDNPVEIICVHWG
Trigger: CCCCCAGTGAACACAGATGATCTCAACAGGATTGTCAAGCTTGCAAGGAGAAAGGAGGGCTTCTTCCTCACAGCCCAACTGAAGCAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp ACGGTGAGCCTCATATCTCATCCAAATGTTTTCCAGCAGCAGGCTGGAAGCTCTGTGTCCCCTGGGCCATaGGACACAATCTCAAACTGC +
Preference number: 5 (lower is better)
Translates to: TVSLISHPNVFQQQAGSSVSPGP*DTISNC
Trigger: GCAGTTTGAGATTGTGTCCAATGGCCCAGGGGACAC...AGAGCTTCCAGCCTGCTGCTGGAAAACATTTGGATGAGATATGAGGCTCACCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp GCATCTGCCAACTTATTTGCCAGTCTGTTTCCTAGCAGCAGGGACAGGAAAGGACGTATGCGGGTGACATaGCCAACTCCACAAGTCACG +
Preference number: 5 (lower is better)
Translates to: ASANLFASLFPSSRDRKGRMRVT*PTPQVT
Trigger: CGTGACTTGTGGAGTTGGCAATGTCACCCGCATACG...TCCTTTCCTGTCCCTGCTGCTAGGAAACAGACTGGCAAATAAGTTGGCAGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp GCTCGGTCTTCGCTCCACGGTGAGCCTCATATCTCATCCAAATGTTTTCCAGCACCATCAGGGAAGCTGTaGCACTTGGCTCCAGGAAAA +
Preference number: 5 (lower is better)
Translates to: ARSSLHGEPHISSKCFPAPSGKL*HLAPGK
Trigger: TTTTCCTGGAGCCAAGTGCAACAGCTTCCCTGATGG...TGCTGGAAAACATTTGGATGAGATATGAGGCTCACCGTGGAGCGAAGACCGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp CGAGTTCACCTGATCTTTCTTCCTGTTCAGCCTCACAGGATTTGTGTGTCATTACAGTGGAAGCCCGGGTaGGTGTTGACACAGCGGGGA +
Preference number: 5 (lower is better)
Translates to: RVHLIFLPVQPHRICVSLQWKPG*VLTQRG
Trigger: TCCCCGCTGTGTCAACACCAACCCGGGCTTCCACTG...TAATGACACACAAATCCTGTGAGGCTGAACAGGAAGAAAGATCAGGTGAACTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS GCA 90 bp CTATCCACAACCCAGGTTTCATTTTCTGCAAAGATTCGGCCCTCCTaGACACAGGCTGACATGTTTCTTGTCTTCAGAGGGCCCCCAATG +
Preference number: 5 (lower is better)
Translates to: LSTTQVSFSAKIRPS*TQADMFLVFRGPPM
Trigger: CATTGGGGGCCCTCTGAAGACAAGAAACATGTCAGCCTGTGTGCAGGAGGGCCGAATCTTTGCAGAAAATGAAACCTGGGTTGTGGATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp GATCCTAGCAGTCAGTATGCAGAGTATGCAGAGCCTGATGACGTCCAGCCAGGTTCTATGTCCTCATTGTaGTCACACTGGTCTCCAACG +
Preference number: 5 (lower is better)
Translates to: DPSSQYAEYAEPDDVQPGSMSSL*SHWSPT
Trigger: CGTTGGAGACCAGTGTGACAACAATGAGGACATAGA...ACCTGGCTGGACGTCATCAGGCTCTGCATACTCTGCATACTGACTGCTAGGATC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp CCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGCTGGAGCTTCATGGTCAGCCTGGTaGGAGTTGGAGATGTATGGG +
Preference number: 5 (lower is better)
Translates to: PRWTDVSKKGCLQHIAGASWSAW*ELEMYG
Trigger: CCCATACATCTCCAACTCCAACCAGGCTGACCATGA...AGCTCCAGCAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 90 bp CATCCTCCAGGAAGTTGGTATGCTGATTGCCTTCTACCCAGTAGTTaGGGTCCAAAGTGTCCCCTGGGCCATTGGACACAATCTCAAACT +
Preference number: 5 (lower is better)
Translates to: HPPGSWYADCLLPSS*GPKCPLGHWTQSQT
Trigger: AGTTTGAGATTGTGTCCAATGGCCCAGGGGACACTTTGGACCTCAACTACTGGGTAGAAGGCAATCAGCATACCAACTTCCTGGAGGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CCA 90 bp TTGGGATCAATTTGTGTGGTCCCCTTGGGATCCAGAGGGACCATCTaGAAGTTTCTGAAGTCTGTCTCAGTGATGGCATTGTTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: LGSICVVPLGSRGTI*KFLKSVSVMALFSG
Trigger: CCCTGAGAACAATGCCATCACTGAGACAGACTTCAGAAACTTCCAGATGGTCCCTCTGGATCCCAAGGGGACCACACAAATTGATCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGTCTCGAGATGCACCTTaGGCCACGTACATCCTGCTC +
Preference number: 5 (lower is better)
Translates to: LTCAGLGNTVPQKSKKCRSRDAP*ATYILL
Trigger: GAGCAGGATGTACGTGGCCAAAGGTGCATCTCGAGA...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp GGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCAGAGTATGAGCTCATTCATCATGTaGCTCAACTCCTCGCAGGAG +
Preference number: 5 (lower is better)
Translates to: GTGKDAQTKILAVSMQSMSSFIM*LNSSQE
Trigger: CTCCTGCGAGGAGTTGAGCAACATGATGAATGAGCT...CATACTCTGCATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTTGGGGCACTGGTGAGTaGCAGAGACGTATGCGGGTG +
Preference number: 5 (lower is better)
Translates to: YSPFKGCSFFVSVESALTWGTGE*QRRMRV
Trigger: CACCCGCATACGTCTCTGCAACTCACCAGTGCCCCA...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTCTGCCCTTGCAGTTCTaGCCACCCATCTGGGGCACT +
Preference number: 5 (lower is better)
Translates to: YSPFKGCSFFVSVESALTLPLQF*PPIWGT
Trigger: AGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCAG...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTTGGGGCTCAGGGCTGTaGCAAACACGTGAGCGCTCA +
Preference number: 5 (lower is better)
Translates to: YSPFKGCSFFVSVESALTWGSGL*QTRERS
Trigger: TGAGCGCTCACGTGTTTGCAACAGCCCTGAGCCCCA...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGGGGCAGTTGTCTTGGTaGTTCTGGTGGCCGTCATCA +
Preference number: 5 (lower is better)
Translates to: LTCAGLGNTVPQKSKKCRGQLSW*FWWPSS
Trigger: TGATGACGGCCACCAGAACAACCAAGACAACTGCCC...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 90 bp AGCGGTCTCCAACCTCATCCTTGTCATAGTCTAATTGACGGGGATTaGAGAGAAGCTGGCAATTGTCCTTCTCATCGCTCACACCGTCAT +
Preference number: 5 (lower is better)
Translates to: SGLQPHPCHSLIDGD*REAGNCPSHRSHRH
Trigger: ATGACGGTGTGAGCGATGAGAAGGACAATTGCCAGCTTCTCTTCAATCCCCGTCAATTAGACTATGACAAGGATGAGGTTGGAGACCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CCA 90 bp ATGTTTCTTGTCTTCAGAGGGCCCCCAATGAGCTCCAAAAGGAACTaGTTATCACTAGACACTCTCTCCAGGTTCTTGCTCAGCTGGTTC +
Preference number: 5 (lower is better)
Translates to: MFLVFRGPPMSSKRN*LSLDTLSRFLLSWF
Trigger: GAACCAGCTGAGCAAGAACCTGGAGAGAGTGTCTAGTGATAACCAGTTCCTTTTGGAGCTCATTGGGGGCCCTCTGAAGACAAGAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp GATCCTAGCAGTCAGTATGCAGAGTATGCAGAGCCTGATGACGTCCAGCCAGGTTTTCTCCTTGCAAGCTaGACAATCCTGTTGAGATCA +
Preference number: 5 (lower is better)
Translates to: DPSSQYAEYAEPDDVQPGFLLAS*TILLRS
Trigger: TGATCTCAACAGGATTGTCAAGCTTGCAAGGAGAAA...ACCTGGCTGGACGTCATCAGGCTCTGCATACTCTGCATACTGACTGCTAGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTTCACAGTGGGTACCATaGCCCAGAAAGCCCACTGGG +
Preference number: 5 (lower is better)
Translates to: YSPFKGCSFFVSVESALTSQWVP*PRKPTG
Trigger: CCCAGTGGGCTTTCTGGGCAATGGTACCCACTGTGA...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp GGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCAGAGTATGATCTGGCACTCACACTaGTACATGGGGTCACTAAAG +
Preference number: 5 (lower is better)
Translates to: GTGKDAQTKILAVSMQSMIWHSH*YMGSLK
Trigger: CTTTAGTGACCCCATGTACAAGTGTGAGTGCCAGAT...CATACTCTGCATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTCCTCCTGCCCGGAATTaGGCAGTTTGGGGCAGTTGT +
Preference number: 5 (lower is better)
Translates to: YSPFKGCSFFVSVESALTPPARN*AVWGSC
Trigger: ACAACTGCCCCAAACTGCCAAATTCCGGGCAGGAGG...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 90 bp ACAGCACTCGCCTTCCACAAAAGATGGGTTGGCACAAGTTGCAGGTaGGCAGGTGATCTGATGGCAGACTGTTTTAAATTTCTTGCAGGT +
Preference number: 5 (lower is better)
Translates to: TALAFHKRWVGTSCR*AGDLMADCFKFLAG
Trigger: ACCTGCAAGAAATTTAAAACAGTCTGCCATCAGATCACCTGCTCACCTGCAACTTGTGCCAACCCATCTTTTGTGGAAGGCGAGTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp GCATCTGCCAACTTATTTGCCAGTCTGTTTCCTAGCAGCAGGGACAGGAAAGGAGTCTTCCGGTTAATGTaGCTGATGCTGAAAAGGTCA +
Preference number: 5 (lower is better)
Translates to: ASANLFASLFPSSRDRKGVFRLM*LMLKRS
Trigger: TGACCTTTTCAGCATCAGCAACATTAACCGGAAGAC...TCCTTTCCTGTCCCTGCTGCTAGGAAACAGACTGGCAAATAAGTTGGCAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGGGGCAGCTTCTCTTGTaGCACATTTGGTGTTCTGTC +
Preference number: 5 (lower is better)
Translates to: LTCAGLGNTVPQKSKKCRGQLLL*HIWCSV
Trigger: GACAGAACACCAAATGTGCAACAAGAGAAGCTGCCC...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGAACACAAGCCGACAGTaGTCCCTGTCATCTGGAACA +
Preference number: 5 (lower is better)
Translates to: LTCAGLGNTVPQKSKKCRNTSRQ*SLSSGT
Trigger: TGTTCCAGATGACAGGGACAACTGTCGGCTTGTGTT...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp TTTTTAAACAAACAAGAAAAGGCAACACAGCGGAATGCTCGGTCTTCGCTCCACTCTTCCTGGTCTGGGTaGAACACAAGCCGACAGTTG +
Preference number: 5 (lower is better)
Translates to: FLNKQEKATQRNARSSLHSSWSG*NTSRQL
Trigger: CAACTGTCGGCTTGTGTTCAACCCAGACCAGGAAGA...GTGGAGCGAAGACCGAGCATTCCGCTGTGTTGCCTTTTCTTGTTTGTTTAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGTCTCTTGTTGCACATTaGGTGTTCTGTCACATCCCC +
Preference number: 5 (lower is better)
Translates to: LTCAGLGNTVPQKSKKCRSLVAH*VFCHIP
Trigger: GGGGATGTGACAGAACACCAAATGTGCAACAAGAGA...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 90 bp TCCACAAAAGATGGGTTGGCACAAGTTGCAGGTGAGCAGGTGATCTaGTGGCAGACTGTTTTAAATTTCTTGCAGGTGCATGTGGTACAA +
Preference number: 5 (lower is better)
Translates to: STKDGLAQVAGEQVI*WQTVLNFLQVHVVQ
Trigger: TTGTACCACATGCACCTGCAAGAAATTTAAAACAGTCTGCCATCAGATCACCTGCTCACCTGCAACTTGTGCCAACCCATCTTTTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp TTTTTAAACAAACAAGAAAAGGCAACACAGCGGAATGCTCGGTCTTCGCTCCACCTCTGGCTCACACACTaGTTTTTCTGTCCTAGCATC +
Preference number: 5 (lower is better)
Translates to: FLNKQEKATQRNARSSLHLWLTH*FFCPSI
Trigger: GATGCTAGGACAGAAAAACAAGTGTGTGAGCCAGAG...GTGGAGCGAAGACCGAGCATTCCGCTGTGTTGCCTTTTCTTGTTTGTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTGTCTCAGTGATGGCATaGTTCTCAGGGCACACATCA +
Preference number: 5 (lower is better)
Translates to: YSPFKGCSFFVSVESALTVSVMA*FSGHTS
Trigger: TGATGTGTGCCCTGAGAACAATGCCATCACTGAGAC...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp TTTTTAAACAAACAAGAAAAGGCAACACAGCGGAATGCTCGGTCTTCGCTCCACTTCCAGCCAATGTTTTaGGGGTCATGCCATAGAGTC +
Preference number: 5 (lower is better)
Translates to: FLNKQEKATQRNARSSLHFQPMF*GSCHRV
Trigger: GACTCTATGGCATGACCCCAAAAACATTGGCTGGAA...GTGGAGCGAAGACCGAGCATTCCGCTGTGTTGCCTTTTCTTGTTTGTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp TTTTTAAACAAACAAGAAAAGGCAACACAGCGGAATGCTCGGTCTTCGCTCCACGAAATAGACCATCTCTaGGGAGAAGACAAACAGGCC +
Preference number: 5 (lower is better)
Translates to: FLNKQEKATQRNARSSLHEIDHL*GEDKQA
Trigger: GGCCTGTTTGTCTTCTCCCAAGAGATGGTCTATTTC...GTGGAGCGAAGACCGAGCATTCCGCTGTGTTGCCTTTTCTTGTTTGTTTAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp ACGGTGAGCCTCATATCTCATCCAAATGTTTTCCAGCAGCAGGCTGGAAGCTCTACTGTTTTAAATTTCTaGCAGGTGCATGTGGTACAA +
Preference number: 5 (lower is better)
Translates to: TVSLISHPNVFQQQAGSSTVLNF*QVHVVQ
Trigger: TTGTACCACATGCACCTGCAAGAAATTTAAAACAGT...AGAGCTTCCAGCCTGCTGCTGGAAAACATTTGGATGAGATATGAGGCTCACCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp GATCAAAATCGTGGATTCTTTCTGTCTAACTTAGAAATGCAGTTGCCATTACTAGCATCCCCCTCGCCATaGTTGTCTGTGTCGATCTGT +
Preference number: 5 (lower is better)
Translates to: DQNRGFFLSNLEMQLPLLASPSP*LSVSIC
Trigger: ACAGATCGACACAGACAACAATGGCGAGGGGGATGC...TAGTAATGGCAACTGCATTTCTAAGTTAGACAGAAAGAATCCACGATTTTGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp GATAACAAGAAACAAGGAAACTCACCCTCAGAGATTTCAACACAAATAACTCCACCAGTTGGGATCAATTaGTGTGGTCCCCTTGGGATC +
Preference number: 5 (lower is better)
Translates to: DNKKQGNSPSEISTQITPPVGIN*CGPLGI
Trigger: GATCCCAAGGGGACCACACAAATTGATCCCAACTGG...TGGAGTTATTTGTGTTGAAATCTCTGAGGGTGAGTTTCCTTGTTTCTTGTTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp GATAACAAGAAACAAGGAAACTCACCCTCAGAGATTTCAACACAAATAACTCCAGAGATGTATGGGCAGTaGTCTTGGTTGTTCTGGTGG +
Preference number: 5 (lower is better)
Translates to: DNKKQGNSPSEISTQITPEMYGQ*SWLFWW
Trigger: CCACCAGAACAACCAAGACAACTGCCCATACATCTC...TGGAGTTATTTGTGTTGAAATCTCTGAGGGTGAGTTTCCTTGTTTCTTGTTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS-3UTR CAA 90 bp GATAACAAGAAACAAGGAAACTCACCCTCAGAGATTTCAACACAAATAACTCCATCATCTATGTCCTCATaGTTGTCACACTGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: DNKKQGNSPSEISTQITPSSMSS*LSHWSP
Trigger: TGGAGACCAGTGTGACAACAATGAGGACATAGATGA...TGGAGTTATTTGTGTTGAAATCTCTGAGGGTGAGTTTCCTTGTTTCTTGTTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 90 bp CTGTGCAGGCTGACCAAGGGGACCAGGGGCTCCAGCGGCCATCAATaGGGCACGGATCACGCTGACAGGGTTTGGTTTCCCGGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: LCRLTKGTRGSSGHQ*GTDHADRVWFPGRC
Trigger: GCAGCGGCCGGGAAACCAAACCCTGTCAGCGTGATCCGTGCCCAATTGATGGCCGCTGGAGCCCCTGGTCCCCTTGGTCAGCCTGCACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CCA 72 bp TCCCGGCCGCTGCCCTTGCAGTTCTTGCCACCCATCTaGGGCACTGGTGAGTTGCAGAGACGTATGCGGGTG +
Preference number: 6 (lower is better)
Translates to: SRPLPLQFLPPI*GTGELQRRMRV
Trigger: CACCCGCATACGTCTCTGCAACTCACCAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCAGCGGCCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 90 bp TGGGAGGTGCCGGGGCCTTCCAACACCAGGAGCGTTCCCCGAGACTaGCGGTCCTGCTTCAGTTGGGCTGTGAGGAAGAAGCCCTCCTTT +
Preference number: 6 (lower is better)
Translates to: WEVPGPSNTRSVPRD*RSCFSWAVRKKPSF
Trigger: AAAGGAGGGCTTCTTCCTCACAGCCCAACTGAAGCAGGACCGCAAGTCTCGGGGAACGCTCCTGGTGTTGGAAGGCCCCGGCACCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS GCA 72 bp CACGCTGACAGGGTTTGGTTTCCCGGCCGCTGCCCTTaGAGTTCTTGCCACCCATCTGGGGCACTGGTGAGT +
Preference number: 6 (lower is better)
Translates to: HADRVWFPGRCP*SSCHPSGALVS
Trigger: ACTCACCAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCAGCGGCCGGGAAACCAAACCCTGTCAGCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS GCA 72 bp ACGGATCACGCTGACAGGGTTTGGTTTCCCGGCCGCTaGCCTTGCAGTTCTTGCCACCCATCTGGGGCACTG +
Preference number: 6 (lower is better)
Translates to: TDHADRVWFPGR*PCSSCHPSGAL
Trigger: CAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCAGCGGCCGGGAAACCAAACCCTGTCAGCGTGATCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CCA 72 bp CAGGCCAACACCGAAGGGTTGGTTCCCCTTGTAGCGTaGTGGACAAGGCAGGCAGTGGAAGCCCGGGTTGGT +
Preference number: 6 (lower is better)
Translates to: QANTEGLVPLVA*WTRQAVEARVG
Trigger: ACCAACCCGGGCTTCCACTGCCTGCCTTGTCCACCACGCTACAAGGGGAACCAACCCTTCGGTGTTGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 72 bp CCGGGGCCTTCCAACACCAGGAGCGTTCCCCGAGACTaGCGGTCCTGCTTCAGTTGGGCTGTGAGGAAGAAG +
Preference number: 6 (lower is better)
Translates to: PGPSNTRSVPRD*RSCFSWAVRKK
Trigger: CTTCTTCCTCACAGCCCAACTGAAGCAGGACCGCAAGTCTCGGGGAACGCTCCTGGTGTTGGAAGGCCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 72 bp CTGACCAAGGGGACCAGGGGCTCCAGCGGCCATCAATaGGGCACGGATCACGCTGACAGGGTTTGGTTTCCC +
Preference number: 6 (lower is better)
Translates to: LTKGTRGSSGHQ*GTDHADRVWFP
Trigger: GGGAAACCAAACCCTGTCAGCGTGATCCGTGCCCAATTGATGGCCGCTGGAGCCCCTGGTCCCCTTGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS GCA 72 bp AGGGTTTGGTTTCCCGGCCGCTGCCCTTGCAGTTCTTaGCACCCATCTGGGGCACTGGTGAGTTGCAGAGAC +
Preference number: 6 (lower is better)
Translates to: RVWFPGRCPCSS*HPSGALVSCRD
Trigger: GTCTCTGCAACTCACCAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCAGCGGCCGGGAAACCAAACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS GCA 72 bp CAGCACACTCATCCAGGTCCTCACAGTGGGTACCATTaGCCAGAAAGCCCACTGGGCAGGAGCCACAGGACC +
Preference number: 6 (lower is better)
Translates to: QHTHPGPHSGYH*PESPLGRSHRT
Trigger: GGTCCTGTGGCTCCTGCCCAGTGGGCTTTCTGGGCAATGGTACCCACTGTGAGGACCTGGATGAGTGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CCA 72 bp GCCAACACCGAAGGGTTGGTTCCCCTTGTAGCGTGGTaGACAAGGCAGGCAGTGGAAGCCCGGGTTGGTGTT +
Preference number: 6 (lower is better)
Translates to: ANTEGLVPLVAW*TRQAVEARVGV
Trigger: AACACCAACCCGGGCTTCCACTGCCTGCCTTGTCCACCACGCTACAAGGGGAACCAACCCTTCGGTGTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 72 bp CAGGGTTTGGTTTCCCGGCCGCTGCCCTTGCAGTTCTaGCCACCCATCTGGGGCACTGGTGAGTTGCAGAGA +
Preference number: 6 (lower is better)
Translates to: QGLVSRPLPLQF*PPIWGTGELQR
Trigger: TCTCTGCAACTCACCAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCAGCGGCCGGGAAACCAAACCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS GCA 72 bp AAAGTGTCCCCTGGGCCATTGGACACAATCTCAAACTaGCTCTGGGAGGTGCCGGGGCCTTCCAACACCAGG +
Preference number: 6 (lower is better)
Translates to: KVSPGPLDTISN*LWEVPGPSNTR
Trigger: CCTGGTGTTGGAAGGCCCCGGCACCTCCCAGAGGCAGTTTGAGATTGTGTCCAATGGCCCAGGGGACACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS GCA 72 bp GCTCAACTCCTCGCAGGAGTGCGTACACACCTCCTGTaGCTTCTCCACACCCTGGACCACGAGATCTGTGGT +
Preference number: 6 (lower is better)
Translates to: AQLLAGVRTHLL*LLHTLDHEICG
Trigger: ACCACAGATCTCGTGGTCCAGGGTGTGGAGAAGGCACAGGAGGTGTGTACGCACTCCTGCGAGGAGTTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CCA 72 bp GTGTTGCTGGTGACATCACAAGACCGGCCTCTCTGCTaGGTCCCAGAGCCACAGGTGACAGAACACTCGGTC +
Preference number: 6 (lower is better)
Translates to: VLLVTSQDRPLC*VPEPQVTEHSV
Trigger: GACCGAGTGTTCTGTCACCTGTGGCTCTGGGACCCAGCAGAGAGGCCGGTCTTGTGATGTCACCAGCAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CCA 72 bp GTCACCTCGGCCGTCACCGTCCGAGTCTTCCTGGTCTaGGTTGAACACAAGCCGACAGTTGTCCCTGTCATC +
Preference number: 6 (lower is better)
Translates to: VTSAVTVRVFLV*VEHKPTVVPVI
Trigger: GATGACAGGGACAACTGTCGGCTTGTGTTCAACCCAGACCAGGAAGACTCGGACGGTGACGGCCGAGGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 72 bp ACAGCACACTCATCCAGGTCCTCACAGTGGGTACCATaGCCCAGAAAGCCCACTGGGCAGGAGCCACAGGAC +
Preference number: 6 (lower is better)
Translates to: TAHSSRSSQWVP*PRKPTGQEPQD
Trigger: GTCCTGTGGCTCCTGCCCAGTGGGCTTTCTGGGCAATGGTACCCACTGTGAGGACCTGGATGAGTGTGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 72 bp CCTCGGCCGTCACCGTCCGAGTCTTCCTGGTCTGGGTaGAACACAAGCCGACAGTTGTCCCTGTCATCTGGA +
Preference number: 6 (lower is better)
Translates to: PRPSPSESSWSG*NTSRQLSLSSG
Trigger: TCCAGATGACAGGGACAACTGTCGGCTTGTGTTCAACCCAGACCAGGAAGACTCGGACGGTGACGGCCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 90 bp CCGCTGCCCTTGCAGTTCTTGCCACCCATCTGGGGCACTGGTGAGTaGCAGAGACGTATGCGGGTGACATTGCCAACTCCACAAGTCACG +
Preference number: 6 (lower is better)
Translates to: PLPLQFLPPIWGTGE*QRRMRVTLPTPQVT
Trigger: CGTGACTTGTGGAGTTGGCAATGTCACCCGCATACGTCTCTGCAACTCACCAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 72 bp GCCCTTGCAGTTCTTGCCACCCATCTGGGGCACTGGTaGGTTGCAGAGACGTATGCGGGTGACATTGCCAAC +
Preference number: 6 (lower is better)
Translates to: ALAVLATHLGHW*VAETYAGDIAN
Trigger: GTTGGCAATGTCACCCGCATACGTCTCTGCAACTCACCAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 72 bp CTCGGCCGTCACCGTCCGAGTCTTCCTGGTCTGGGTTaGACACAAGCCGACAGTTGTCCCTGTCATCTGGAA +
Preference number: 6 (lower is better)
Translates to: LGRHRPSLPGLG*TQADSCPCHLE
Trigger: TTCCAGATGACAGGGACAACTGTCGGCTTGTGTTCAACCCAGACCAGGAAGACTCGGACGGTGACGGCCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS GCA 72 bp TCCAACACCAGGAGCGTTCCCCGAGACTTGCGGTCCTaGTTCAGTTGGGCTGTGAGGAAGAAGCCCTCCTTT +
Preference number: 6 (lower is better)
Translates to: SNTRSVPRDLRS*FSWAVRKKPSF
Trigger: AAAGGAGGGCTTCTTCCTCACAGCCCAACTGAAGCAGGACCGCAAGTCTCGGGGAACGCTCCTGGTGTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CCA 72 bp TCTGTGACCACAGCACACTCATCCAGGTCCTCACAGTaGGTACCATTGCCCAGAAAGCCCACTGGGCAGGAG +
Preference number: 6 (lower is better)
Translates to: SVTTAHSSRSSQ*VPLPRKPTGQE
Trigger: CTCCTGCCCAGTGGGCTTTCTGGGCAATGGTACCCACTGTGAGGACCTGGATGAGTGTGCTGTGGTCACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CCA 72 bp CAAATGTCACCTCGGCCGTCACCGTCCGAGTCTTCCTaGTCTGGGTTGAACACAAGCCGACAGTTGTCCCTG +
Preference number: 6 (lower is better)
Translates to: QMSPRPSPSESS*SGLNTSRQLSL
Trigger: CAGGGACAACTGTCGGCTTGTGTTCAACCCAGACCAGGAAGACTCGGACGGTGACGGCCGAGGTGACATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 72 bp TTCTGTCCTAGCATCCTCCAGGCCAACACCGAAGGGTaGGTTCCCCTTGTAGCGTGGTGGACAAGGCAGGCA +
Preference number: 6 (lower is better)
Translates to: FCPSILQANTEG*VPLVAWWTRQA
Trigger: TGCCTGCCTTGTCCACCACGCTACAAGGGGAACCAACCCTTCGGTGTTGGCCTGGAGGATGCTAGGACAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 90 bp TTCCAACACCAGGAGCGTTCCCCGAGACTTGCGGTCCTGCTTCAGTaGGGCTGTGAGGAAGAAGCCCTCCTTTCTCCTTGCAAGCTTGAC +
Preference number: 6 (lower is better)
Translates to: FQHQERSPRLAVLLQ*GCEEEALLSPCKLD
Trigger: GTCAAGCTTGCAAGGAGAAAGGAGGGCTTCTTCCTCACAGCCCAACTGAAGCAGGACCGCAAGTCTCGGGGAACGCTCCTGGTGTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 90 bp CACTTGTTTTTCTGTCCTAGCATCCTCCAGGCCAACACCGAAGGGTaGGTTCCCCTTGTAGCGTGGTGGACAAGGCAGGCAGTGGAAGCC +
Preference number: 6 (lower is better)
Translates to: HLFFCPSILQANTEG*VPLVAWWTRQAVEA
Trigger: GGCTTCCACTGCCTGCCTTGTCCACCACGCTACAAGGGGAACCAACCCTTCGGTGTTGGCCTGGAGGATGCTAGGACAGAAAAACAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 72 bp GGTGCTCGCCAGTACCAGTCGTGGAGTTTACCACTTTaGGTGACACACCAGAGTAGCCGTAAGCCCGACTGG +
Preference number: 6 (lower is better)
Translates to: GARQYQSWSLPL*VTHQSSRKPDW
Trigger: CCAGTCGGGCTTACGGCTACTCTGGTGTGTCACTCAAAGTGGTAAACTCCACGACTGGTACTGGCGAGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 72 bp GGTGGACAAGGCAGGCAGTGGAAGCCCGGGTTGGTGTaGACACAGCGGGGAGCTTTGTTAGTTGAGAAGCAA +
Preference number: 6 (lower is better)
Translates to: GGQGRQWKPGLV*TQRGALLVEKQ
Trigger: TTGCTTCTCAACTAACAAAGCTCCCCGCTGTGTCAACACCAACCCGGGCTTCCACTGCCTGCCTTGTCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 90 bp CAAATGTCACCTCGGCCGTCACCGTCCGAGTCTTCCTGGTCTGGGTaGAACACAAGCCGACAGTTGTCCCTGTCATCTGGAACACCATCA +
Preference number: 6 (lower is better)
Translates to: QMSPRPSPSESSWSG*NTSRQLSLSSGTPS
Trigger: TGATGGTGTTCCAGATGACAGGGACAACTGTCGGCTTGTGTTCAACCCAGACCAGGAAGACTCGGACGGTGACGGCCGAGGTGACATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 72 bp TCTGGGGCACTGGTGAGTTGCAGAGACGTATGCGGGTaGCATTGCCAACTCCACAAGTCACGGAGCATGAAG +
Preference number: 6 (lower is better)
Translates to: SGALVSCRDVCG*HCQLHKSRSMK
Trigger: CTTCATGCTCCGTGACTTGTGGAGTTGGCAATGTCACCCGCATACGTCTCTGCAACTCACCAGTGCCCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 72 bp CTCGCCAGTACCAGTCGTGGAGTTTACCACTTTGAGTaGCACACCAGAGTAGCCGTAAGCCCGACTGGGCTT +
Preference number: 6 (lower is better)
Translates to: LASTSRGVYHFE*HTRVAVSPTGL
Trigger: AAGCCCAGTCGGGCTTACGGCTACTCTGGTGTGTCACTCAAAGTGGTAAACTCCACGACTGGTACTGGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CCA 72 bp CCAATGTTTTTGGGGTCATGCCATAGAGTCCGGACCTaGCCTTCTGTGTTTCCCGTGTGCCACAGGGCATTC +
Preference number: 6 (lower is better)
Translates to: PMFLGSCHRVRT*PSVFPVCHRAF
Trigger: GAATGCCCTGTGGCACACGGGAAACACAGAAGGCCAGGTCCGGACTCTATGGCATGACCCCAAAAACATTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 72 bp TTGCAGTTCTTGCCACCCATCTGGGGCACTGGTGAGTaGCAGAGACGTATGCGGGTGACATTGCCAACTCCA +
Preference number: 6 (lower is better)
Translates to: LQFLPPIWGTGE*QRRMRVTLPTP
Trigger: TGGAGTTGGCAATGTCACCCGCATACGTCTCTGCAACTCACCAGTGCCCCAGATGGGTGGCAAGAACTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 90 bp AGCTGGTTCACCATGACGTGCAGTCCAGAGAGCTCATTCATCATGTaGCTCAACTCCTCGCAGGAGTGCGTACACACCTCCTGTGCCTTC +
Preference number: 6 (lower is better)
Translates to: SWFTMTCSPESSFIM*LNSSQECVHTSCAF
Trigger: GAAGGCACAGGAGGTGTGTACGCACTCCTGCGAGGAGTTGAGCAACATGATGAATGAGCTCTCTGGACTGCACGTCATGGTGAACCAGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 72 bp CTGCAAACACGAGATGGACATTCTGCAGCAAGCCCCTaGAGTGACTCTCTCGAGATGCACCTTTGGCCACGT +
Preference number: 6 (lower is better)
Translates to: LQTRDGHSAASP*SDSLEMHLWPR
Trigger: ACGTGGCCAAAGGTGCATCTCGAGAGAGTCACTTCAGGGGCTTGCTGCAGAATGTCCATCTCGTGTTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 72 bp GTGCCTTCTCCACACCCTGGACCACGAGATCTGTGGTaGTGTGAGGGCTCAGATGGAGAGTCTCTGTATGTT +
Preference number: 6 (lower is better)
Translates to: VPSPHPGPRDLW*CEGSDGESLYV
Trigger: AACATACAGAGACTCTCCATCTGAGCCCTCACATCACCACAGATCTCGTGGTCCAGGGTGTGGAGAAGGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS GCA 72 bp ATTCTGCAGCAAGCCCCTGAAGTGACTCTCTCGAGATaGACCTTTGGCCACGTACATCCTGCTCCTGTCTAC +
Preference number: 6 (lower is better)
Translates to: ILQQAPEVTLSR*TFGHVHPAPVY
Trigger: GTAGACAGGAGCAGGATGTACGTGGCCAAAGGTGCATCTCGAGAGAGTCACTTCAGGGGCTTGCTGCAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 72 bp AACACGAGATGGACATTCTGCAGCAAGCCCCTGAAGTaGCTCTCTCGAGATGCACCTTTGGCCACGTACATC +
Preference number: 6 (lower is better)
Translates to: NTRWTFCSKPLK*LSRDAPLATYI
Trigger: GATGTACGTGGCCAAAGGTGCATCTCGAGAGAGTCACTTCAGGGGCTTGCTGCAGAATGTCCATCTCGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 90 bp TTCCGGTTAATGTTGCTGATGCTGAAAAGGTCAAATGAAGTGTCCTaGACGTGGTCACCAGCAGAAGCTCTTGGCCCTATGCCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: FRLMLLMLKRSNEVS*TWSPAEALGPMPRA
Trigger: GGCTCTGGGCATAGGGCCAAGAGCTTCTGCTGGTGACCACGTCAAGGACACTTCATTTGACCTTTTCAGCATCAGCAACATTAACCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 90 bp GCAGCTGTGAGTCTTGTCCTTACATGGATTCTCTGGCTCACACACTaGTTTTTCTGTCCTAGCATCCTCCAGGCCAACACCGAAGGGTTG +
Preference number: 6 (lower is better)
Translates to: AAVSLVLTWILWLTH*FFCPSILQANTEGL
Trigger: CAACCCTTCGGTGTTGGCCTGGAGGATGCTAGGACAGAAAAACAAGTGTGTGAGCCAGAGAATCCATGTAAGGACAAGACTCACAGCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 90 bp CACCAGCTCTTTGCCTTGGTGACGAATTACCCAGTTGGGATCAATTaGTGTGGTCCCCTTGGGATCCAGAGGGACCATCTGGAAGTTTCT +
Preference number: 6 (lower is better)
Translates to: HQLFALVTNYPVGIN*CGPLGIQRDHLEVS
Trigger: AGAAACTTCCAGATGGTCCCTCTGGATCCCAAGGGGACCACACAAATTGATCCCAACTGGGTAATTCGTCACCAAGGCAAAGAGCTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 72 bp GGAAGTTGGTATGCTGATTGCCTTCTACCCAGTAGTTaGGGTCCAAAGTGTCCCCTGGGCCATTGGACACAA +
Preference number: 6 (lower is better)
Translates to: GSWYADCLLPSS*GPKCPLGHWTQ
Trigger: TTGTGTCCAATGGCCCAGGGGACACTTTGGACCTCAACTACTGGGTAGAAGGCAATCAGCATACCAACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 72 bp ACACTCTCTCCAGGTTCTTGCTCAGCTGGTTCACCATaGCGTGCAGTCCAGAGAGCTCATTCATCATGTTGC +
Preference number: 6 (lower is better)
Translates to: TLSPGSCSAGSP*RAVQRAHSSCC
Trigger: GCAACATGATGAATGAGCTCTCTGGACTGCACGTCATGGTGAACCAGCTGAGCAAGAACCTGGAGAGAGTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 72 bp ATTTTCTGCAAAGATTCGGCCCTCCTGCACACAGGCTaGCATGTTTCTTGTCTTCAGAGGGCCCCCAATGAG +
Preference number: 6 (lower is better)
Translates to: IFCKDSALLHTG*HVSCLQRAPNE
Trigger: CTCATTGGGGGCCCTCTGAAGACAAGAAACATGTCAGCCTGTGTGCAGGAGGGCCGAATCTTTGCAGAAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CCA 72 bp GTCTTCAGAGGGCCCCCAATGAGCTCCAAAAGGAACTaGTTATCACTAGACACTCTCTCCAGGTTCTTGCTC +
Preference number: 6 (lower is better)
Translates to: VFRGPPMSSKRN*LSLDTLSRFLL
Trigger: GAGCAAGAACCTGGAGAGAGTGTCTAGTGATAACCAGTTCCTTTTGGAGCTCATTGGGGGCCCTCTGAAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 72 bp TTTGCCTTGGTGACGAATTACCCAGTTGGGATCAATTaGTGTGGTCCCCTTGGGATCCAGAGGGACCATCTG +
Preference number: 6 (lower is better)
Translates to: FALVTNYPVGIN*CGPLGIQRDHL
Trigger: CAGATGGTCCCTCTGGATCCCAAGGGGACCACACAAATTGATCCCAACTGGGTAATTCGTCACCAAGGCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 90 bp AAACACGGGTTGGATAAGCACCCATCAATAGGGCAGCTTCTCTTGTaGCACATTTGGTGTTCTGTCACATCCCCGACACAGTCCTTCCCT +
Preference number: 6 (lower is better)
Translates to: KHGLDKHPSIGQLLL*HIWCSVTSPTQSFP
Trigger: AGGGAAGGACTGTGTCGGGGATGTGACAGAACACCAAATGTGCAACAAGAGAAGCTGCCCTATTGATGGGTGCTTATCCAACCCGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 90 bp GGAAAACACGGGTTGGATAAGCACCCATCAATAGGGCAGCTTCTCTaGTTGCACATTTGGTGTTCTGTCACATCCCCGACACAGTCCTTC +
Preference number: 6 (lower is better)
Translates to: GKHGLDKHPSIGQLL*LHIWCSVTSPTQSF
Trigger: GAAGGACTGTGTCGGGGATGTGACAGAACACCAAATGTGCAACAAGAGAAGCTGCCCTATTGATGGGTGCTTATCCAACCCGTGTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 72 bp CGGGTTGGTGTTGACACAGCGGGGAGCTTTGTTAGTTaGGAAGCAAATATCTGTGACCACAGCACACTCATC +
Preference number: 6 (lower is better)
Translates to: RVGVDTAGSFVS*EANICDHSTLI
Trigger: GATGAGTGTGCTGTGGTCACAGATATTTGCTTCTCAACTAACAAAGCTCCCCGCTGTGTCAACACCAACCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS GCA 72 bp GACTCTCTCGAGATGCACCTTTGGCCACGTACATCCTaGTCCTGTCTACTTCTAGCTGCTCATAGAATGGTT +
Preference number: 6 (lower is better)
Translates to: DSLEMHLWPRTS*SCLLLAAHRMV
Trigger: AACCATTCTATGAGCAGCTAGAAGTAGACAGGAGCAGGATGTACGTGGCCAAAGGTGCATCTCGAGAGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS GCA 72 bp ACCCAGGTTTCATTTTCTGCAAAGATTCGGCCCTCCTaGACACAGGCTGACATGTTTCTTGTCTTCAGAGGG +
Preference number: 6 (lower is better)
Translates to: TQVSFSAKIRPS*TQADMFLVFRG
Trigger: CCCTCTGAAGACAAGAAACATGTCAGCCTGTGTGCAGGAGGGCCGAATCTTTGCAGAAAATGAAACCTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CCA 72 bp TTATCACTAGACACTCTCTCCAGGTTCTTGCTCAGCTaGTTCACCATGACGTGCAGTCCAGAGAGCTCATTC +
Preference number: 6 (lower is better)
Translates to: LSLDTLSRFLLS*FTMTCSPESSF
Trigger: GAATGAGCTCTCTGGACTGCACGTCATGGTGAACCAGCTGAGCAAGAACCTGGAGAGAGTGTCTAGTGATAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CCA 72 bp ATTTGTGTGGTCCCCTTGGGATCCAGAGGGACCATCTaGAAGTTTCTGAAGTCTGTCTCAGTGATGGCATTG +
Preference number: 6 (lower is better)
Translates to: ICVVPLGSRGTI*KFLKSVSVMAL
Trigger: CAATGCCATCACTGAGACAGACTTCAGAAACTTCCAGATGGTCCCTCTGGATCCCAAGGGGACCACACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 72 bp GGGTTGGATAAGCACCCATCAATAGGGCAGCTTCTCTaGTTGCACATTTGGTGTTCTGTCACATCCCCGACA +
Preference number: 6 (lower is better)
Translates to: GLDKHPSIGQLL*LHIWCSVTSPT
Trigger: TGTCGGGGATGTGACAGAACACCAAATGTGCAACAAGAGAAGCTGCCCTATTGATGGGTGCTTATCCAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 72 bp TCTGAGTTTGCTGTCTGCACCAGCTCTTTGCCTTGGTaGCGAATTACCCAGTTGGGATCAATTTGTGTGGTC +
Preference number: 6 (lower is better)
Translates to: SEFAVCTSSLPW*RITQLGSICVV
Trigger: GACCACACAAATTGATCCCAACTGGGTAATTCGTCACCAAGGCAAAGAGCTGGTGCAGACAGCAAACTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 72 bp ATGTTGCTGATGCTGAAAAGGTCAAATGAAGTGTCCTaGACGTGGTCACCAGCAGAAGCTCTTGGCCCTATG +
Preference number: 6 (lower is better)
Translates to: MLLMLKRSNEVS*TWSPAEALGPM
Trigger: CATAGGGCCAAGAGCTTCTGCTGGTGACCACGTCAAGGACACTTCATTTGACCTTTTCAGCATCAGCAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 72 bp TTGGATAAGCACCCATCAATAGGGCAGCTTCTCTTGTaGCACATTTGGTGTTCTGTCACATCCCCGACACAG +
Preference number: 6 (lower is better)
Translates to: LDKHPSIGQLLL*HIWCSVTSPTQ
Trigger: CTGTGTCGGGGATGTGACAGAACACCAAATGTGCAACAAGAGAAGCTGCCCTATTGATGGGTGCTTATCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 72 bp AGTCTTGTCCTTACATGGATTCTCTGGCTCACACACTaGTTTTTCTGTCCTAGCATCCTCCAGGCCAACACC +
Preference number: 6 (lower is better)
Translates to: SLVLTWILWLTH*FFCPSILQANT
Trigger: GGTGTTGGCCTGGAGGATGCTAGGACAGAAAAACAAGTGTGTGAGCCAGAGAATCCATGTAAGGACAAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 72 bp GATGGGTTGGCACAAGTTGCAGGTGAGCAGGTGATCTaGTGGCAGACTGTTTTAAATTTCTTGCAGGTGCAT +
Preference number: 6 (lower is better)
Translates to: DGLAQVAGEQVI*WQTVLNFLQVH
Trigger: ATGCACCTGCAAGAAATTTAAAACAGTCTGCCATCAGATCACCTGCTCACCTGCAACTTGTGCCAACCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CCA 72 bp GAGTTGGAGATGTATGGGCAGTTGTCTTGGTTGTTCTaGTGGCCGTCATCATCTATGTCCTCATTGTTGTCA +
Preference number: 6 (lower is better)
Translates to: ELEMYGQLSWLF*WPSSSMSSLLS
Trigger: TGACAACAATGAGGACATAGATGATGACGGCCACCAGAACAACCAAGACAACTGCCCATACATCTCCAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 90 bp GCATTGTTCTCAGGGCACACATCATCAATATCTGGGACATTATCATaGTCAAAGTCATCTTTACAAATGTCACCTCGGCCGTCACCGTCC +
Preference number: 6 (lower is better)
Translates to: ALFSGHTSSISGTLS*SKSSLQMSPRPSPS
Trigger: GGACGGTGACGGCCGAGGTGACATTTGTAAAGATGACTTTGACAATGATAATGTCCCAGATATTGATGATGTGTGCCCTGAGAACAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS TCA 72 bp GCCTTCCACAAAAGATGGGTTGGCACAAGTTGCAGGTaGGCAGGTGATCTGATGGCAGACTGTTTTAAATTT +
Preference number: 6 (lower is better)
Translates to: AFHKRWVGTSCR*AGDLMADCFKF
Trigger: AAATTTAAAACAGTCTGCCATCAGATCACCTGCTCACCTGCAACTTGTGCCAACCCATCTTTTGTGGAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 90 bp AGAGGGACCATCTGGAAGTTTCTGAAGTCTGTCTCAGTGATGGCATaGTTCTCAGGGCACACATCATCAATATCTGGGACATTATCATTG +
Preference number: 6 (lower is better)
Translates to: RGTIWKFLKSVSVMA*FSGHTSSISGTLSL
Trigger: CAATGATAATGTCCCAGATATTGATGATGTGTGCCCTGAGAACAATGCCATCACTGAGACAGACTTCAGAAACTTCCAGATGGTCCCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 72 bp ATCTGGAAGTTTCTGAAGTCTGTCTCAGTGATGGCATaGTTCTCAGGGCACACATCATCAATATCTGGGACA +
Preference number: 6 (lower is better)
Translates to: IWKFLKSVSVMA*FSGHTSSISGT
Trigger: TGTCCCAGATATTGATGATGTGTGCCCTGAGAACAATGCCATCACTGAGACAGACTTCAGAAACTTCCAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3
CDS CAA 72 bp TCAGGGCACACATCATCAATATCTGGGACATTATCATaGTCAAAGTCATCTTTACAAATGTCACCTCGGCCG +
Preference number: 6 (lower is better)
Translates to: SGHTSSISGTLS*SKSSLQMSPRP
Trigger: CGGCCGAGGTGACATTTGTAAAGATGACTTTGACAATGATAATGTCCCAGATATTGATGATGTGTGCCCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000170872.3