Pregenerated sensors for THBS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023885Ensembl transcript IDs: ENSMUST00000170872.3
Found 259 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CCAGGTATGCTTTCCACACTGCCCAACCCAGGCAGGCAGCTGAAATaGACATTGCCTCTGCTGAGGTTTTCTTCTGAAAGCTCTGAGAAG | + |
Preference number: 1 (lower is better) Translates to: PGMLSTLPNPGRQLK*TLPLLRFSSESSEK Trigger: CTTCTCAGAGCTTTCAGAAGAAAACCTCAGCAGAGGCAATGTCCATTTCAGCTGCCTGCCTGGGTTGGGCAGTGTGGAAAGCATACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR TCA 90 bp | TCACATCGCTCCCACCACCTTGTACCATTGAACCAAATGCCCAAGTaGGAGCCTAAATGTTCTTCACACCCTCATGGCCAGAAGTCTCCT | + |
Preference number: 1 (lower is better) Translates to: SHRSHHLVPLNQMPK*EPKCSSHPHGQKSP Trigger: AGGAGACTTCTGGCCATGAGGGTGTGAAGAACATTTAGGCTCTCACTTGGGCATTTGGTTCAATGGTACAAGGTGGTGGGAGCGATGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR CCA 90 bp | TTCAAATCACTGGACAAGGGGCCACAGTCTCACATGACTGTCTTCTaGCCTCTTCCTTACTGCAGCCGAGTTCACCTGATCTTTCTTCCT | + |
Preference number: 1 (lower is better) Translates to: FKSLDKGPQSHMTVF*PLPYCSRVHLIFLP Trigger: AGGAAGAAAGATCAGGTGAACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCCTTGTCCAGTGATTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR GCA 90 bp | AACTTATTTGCCAGTCTGTTTCCTAGCAGCAGGGACAGGAAAGGATaGCCAGACAAAGATCCTAGCAGTCAGTATGCAGAGTATGCAGAG | + |
Preference number: 1 (lower is better) Translates to: NLFASLFPSSRDRKG*PDKDPSSQYAEYAE Trigger: CTCTGCATACTCTGCATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCCTGCTGCTAGGAAACAGACTGGCAAATAAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR CCA 90 bp | CTCATATCTCATCCAAATGTTTTCCAGCAGCAGGCTGGAAGCTCTTaGAGTGCAATTGATGTTTCTCCTTTGAAGACACTTGGACTTGGT | + |
Preference number: 1 (lower is better) Translates to: LISHPNVFQQQAGSS*SAIDVSPLKTLGLG Trigger: ACCAAGTCCAAGTGTCTTCAAAGGAGAAACATCAATTGCACTCCAAGAGCTTCCAGCCTGCTGCTGGAAAACATTTGGATGAGATATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR GCA 90 bp | ACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTaGAGGATAACAAGAAACAAGGAAACTCACCCTCAGAGATTTCAA | + |
Preference number: 1 (lower is better) Translates to: TCAGLGNTVPQKSKK*RITRNKETHPQRFQ Trigger: TTGAAATCTCTGAGGGTGAGTTTCCTTGTTTCTTGTTATCCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR-3UTR TCA 90 bp | GCATCTGCCAACTTATTTGCCAGTCTGTTTCCTAGCAGCAGGGACAGGAAAGGAGGCCACAGTCTCACATaGCTGTCTTCTGGCCTCTTC | + |
Preference number: 2 (lower is better) Translates to: ASANLFASLFPSSRDRKGGHSLT*LSSGLF Trigger: GAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCC...TCCTTTCCTGTCCCTGCTGCTAGGAAACAGACTGGCAAATAAGTTGGCAGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR-3UTR CCA 90 bp | GGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTCAGGCTGGAAGCTCTTaGAGTGCAATTGATGTTTCT | + |
Preference number: 2 (lower is better) Translates to: GATVSHDCLLASSLLQPSQAGSS*SAIDVS Trigger: AGAAACATCAATTGCACTCCAAGAGCTTCCAGCCTG...ACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR-3UTR GCA 90 bp | AAGGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGACAGAAAAGCCACAAGTaGCAAGATGGACTGATGTGT | + |
Preference number: 2 (lower is better) Translates to: KGPQSHMTVFWPLPYCSRQKSHK*QDGLMC Trigger: ACACATCAGTCCATCTTGGCACTTGTGGCTTTTCTG...TCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR-3UTR TCA 90 bp | CTAGCAGCAGGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGGGACATTGCCTCTGCTaGGGTTTTCTTCTGAAAGCT | + |
Preference number: 2 (lower is better) Translates to: LAAGTGKDAQTKILAVSMGHCLC*GFLLKA Trigger: AGCTTTCAGAAGAAAACCTCAGCAGAGGCAATGTCC...CATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCCTGCTGCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR-3UTR CCA 90 bp | CTAGCAGCAGGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGAATGTTTCAAATCACTaGACAAGGGGCCACAGTCTC | + |
Preference number: 2 (lower is better) Translates to: LAAGTGKDAQTKILAVSMNVSNH*TRGHSL Trigger: GAGACTGTGGCCCCTTGTCCAGTGATTTGAAACATT...CATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCCTGCTGCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR-3UTR TCA 90 bp | GGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCAGAGTATGCTACAGCTGGAACCCTaGAATATTCCCCTTTCAAAG | + |
Preference number: 2 (lower is better) Translates to: GTGKDAQTKILAVSMQSMLQLEP*NIPLSK Trigger: CTTTGAAAGGGGAATATTTCAGGGTTCCAGCTGTAG...CATACTCTGCATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR-3UTR CCA 90 bp | CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGCACATGACTGTCTTCTaGCCTCTTCCTTACTGCAGC | + |
Preference number: 2 (lower is better) Translates to: LTCAGLGNTVPQKSKKCRHMTVF*PLPYCS Trigger: GCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTG...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR-3UTR TCA 90 bp | GCATCTGCCAACTTATTTGCCAGTCTGTTTCCTAGCAGCAGGGACAGGAAAGGAAGCACTGAGGGTAAGTaGGCCATATTTTTCATGCTT | + |
Preference number: 2 (lower is better) Translates to: ASANLFASLFPSSRDRKGSTEGK*AIFFML Trigger: AAGCATGAAAAATATGGCTCACTTACCCTCAGTGCT...TCCTTTCCTGTCCCTGCTGCTAGGAAACAGACTGGCAAATAAGTTGGCAGATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR-3UTR TCA 90 bp | CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGTTGATGTTTCTCCTTTaGAGACACTTGGACTTGGTG | + |
Preference number: 2 (lower is better) Translates to: LTCAGLGNTVPQKSKKCRLMFLL*RHLDLV Trigger: CACCAAGTCCAAGTGTCTTCAAAGGAGAAACATCAA...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR-3UTR CCA 90 bp | CGAGTTCACCTGATCTTTCTTCCTGTTCAGCCTCACAGGATTTGTGTGTCATTACCACAAGTGCCAAGATaGACTGATGTGTCTAAGAAG | + |
Preference number: 2 (lower is better) Translates to: RVHLIFLPVQPHRICVSLPQVPR*TDVSKK Trigger: CTTCTTAGACACATCAGTCCATCTTGGCACTTGTGG...TAATGACACACAAATCCTGTGAGGCTGAACAGGAAGAAAGATCAGGTGAACTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR-3UTR TCA 90 bp | TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTACAGGAAATGCCAAATaGCAGAAAAGCCACAAGTGC | + |
Preference number: 2 (lower is better) Translates to: YSPFKGCSFFVSVESALTTGNAK*QKSHKC Trigger: GCACTTGTGGCTTTTCTGTCATTTGGCATTTCCTGT...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR-3UTR GCA 90 bp | GATCAAAATCGTGGATTCTTTCTGTCTAACTTAGAAATGCAGTTGCCATTACTACCTGCTGGGAGATCATaGAGCTTAAAGCAAAACAAA | + |
Preference number: 2 (lower is better) Translates to: DQNRGFFLSNLEMQLPLLPAGRS*SLKQNK Trigger: TTTGTTTTGCTTTAAGCTGCATGATCTCCCAGCAGG...TAGTAATGGCAACTGCATTTCTAAGTTAGACAGAAAGAATCCACGATTTTGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR-3UTR CCA 90 bp | GATAACAAGAAACAAGGAAACTCACCCTCAGAGATTTCAACACAAATAACTCCAATGCATTACCAAATTTaGCAAAAGCAGCTTTTGCAT | + |
Preference number: 2 (lower is better) Translates to: DNKKQGNSPSEISTQITPMHYQI*QKQLLH Trigger: ATGCAAAAGCTGCTTTTGCCAAATTTGGTAATGCAT...TGGAGTTATTTGTGTTGAAATCTCTGAGGGTGAGTTTCCTTGTTTCTTGTTATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR CCA 72 bp | CTGGACAAGGGGCCACAGTCTCACATGACTGTCTTCTaGCCTCTTCCTTACTGCAGCCGAGTTCACCTGATC | + |
Preference number: 3 (lower is better) Translates to: LDKGPQSHMTVF*PLPYCSRVHLI Trigger: GATCAGGTGAACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCCTTGTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR CCA 72 bp | CTTTCCACACTGCCCAACCCAGGCAGGCAGCTGAAATaGACATTGCCTCTGCTGAGGTTTTCTTCTGAAAGC | + |
Preference number: 3 (lower is better) Translates to: LSTLPNPGRQLK*TLPLLRFSSES Trigger: GCTTTCAGAAGAAAACCTCAGCAGAGGCAATGTCCATTTCAGCTGCCTGCCTGGGTTGGGCAGTGTGGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR-3UTR CAA 90 bp | CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGGGTGTTTGCAGCACATaGCTGGAGCTGGAGCCCTGC | + |
Preference number: 3 (lower is better) Translates to: LTCAGLGNTVPQKSKKCRGVCST*LELEPC Trigger: GCAGGGCTCCAGCTCCAGCAATGTGCTGCAAACACC...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR-3UTR CAA 90 bp | GATCCTAGCAGTCAGTATGCAGAGTATGCAGAGCCTGATGACGTCCAGCCAGGTAAGGATGCAGCTTCTTaGTCTCTGTCGAGTCAGCTT | + |
Preference number: 3 (lower is better) Translates to: DPSSQYAEYAEPDDVQPGKDAAS*SLSSQL Trigger: AAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTT...ACCTGGCTGGACGTCATCAGGCTCTGCATACTCTGCATACTGACTGCTAGGATC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR TCA 72 bp | TCCCACCACCTTGTACCATTGAACCAAATGCCCAAGTaGGAGCCTAAATGTTCTTCACACCCTCATGGCCAG | + |
Preference number: 3 (lower is better) Translates to: SHHLVPLNQMPK*EPKCSSHPHGQ Trigger: CTGGCCATGAGGGTGTGAAGAACATTTAGGCTCTCACTTGGGCATTTGGTTCAATGGTACAAGGTGGTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR GCA 72 bp | CAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTaGAGCCGAGTTCACCTGATCTTTCTTCCTGTTCAG | + |
Preference number: 3 (lower is better) Translates to: QSHMTVFWPLPY*SRVHLIFLPVQ Trigger: CTGAACAGGAAGAAAGATCAGGTGAACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR-3UTR CAA 90 bp | GGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCAGAGTATGCAGCTGAAATGGACATaGCCTCTGCTGAGGTTTTCT | + |
Preference number: 3 (lower is better) Translates to: GTGKDAQTKILAVSMQSMQLKWT*PLLRFS Trigger: AGAAAACCTCAGCAGAGGCAATGTCCATTTCAGCTG...CATACTCTGCATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR TCA 72 bp | CTGGAAGCTCTTGGAGTGCAATTGATGTTTCTCCTTTaGAGACACTTGGACTTGGTGCTGATGAAGGAGGTG | + |
Preference number: 3 (lower is better) Translates to: LEALGVQLMFLL*RHLDLVLMKEV Trigger: CACCTCCTTCATCAGCACCAAGTCCAAGTGTCTTCAAAGGAGAAACATCAATTGCACTCCAAGAGCTTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR TCA 72 bp | GAATGTATTCACATCGCTCCCACCACCTTGTACCATTaGACCAAATGCCCAAGTGAGAGCCTAAATGTTCTT | + |
Preference number: 3 (lower is better) Translates to: ECIHIAPTTLYH*TKCPSESLNVL Trigger: AAGAACATTTAGGCTCTCACTTGGGCATTTGGTTCAATGGTACAAGGTGGTGGGAGCGATGTGAATACATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR CCA 72 bp | CATCCAAATGTTTTCCAGCAGCAGGCTGGAAGCTCTTaGAGTGCAATTGATGTTTCTCCTTTGAAGACACTT | + |
Preference number: 3 (lower is better) Translates to: HPNVFQQQAGSS*SAIDVSPLKTL Trigger: AAGTGTCTTCAAAGGAGAAACATCAATTGCACTCCAAGAGCTTCCAGCCTGCTGCTGGAAAACATTTGGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR-3UTR CAA 90 bp | GATAACAAGAAACAAGGAAACTCACCCTCAGAGATTTCAACACAAATAACTCCACATCTGCCAACTTATTaGCCAGTCTGTTTCCTAGCA | + |
Preference number: 3 (lower is better) Translates to: DNKKQGNSPSEISTQITPHLPTY*PVCFLA Trigger: TGCTAGGAAACAGACTGGCAAATAAGTTGGCAGATG...TGGAGTTATTTGTGTTGAAATCTCTGAGGGTGAGTTTCCTTGTTTCTTGTTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR-3UTR CAA 90 bp | GATCAAAATCGTGGATTCTTTCTGTCTAACTTAGAAATGCAGTTGCCATTACTAAATGCATTACCAAATTaGGCAAAAGCAGCTTTTGCA | + |
Preference number: 3 (lower is better) Translates to: DQNRGFFLSNLEMQLPLLNALPN*AKAAFA Trigger: TGCAAAAGCTGCTTTTGCCAAATTTGGTAATGCATT...TAGTAATGGCAACTGCATTTCTAAGTTAGACAGAAAGAATCCACGATTTTGATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | GGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTGGTAACTGTGCAGGCTaGCCAAGGGGACCAGGGGCT | + |
Preference number: 4 (lower is better) Translates to: GATVSHDCLLASSLLQPSGNCAG*PRGPGA Trigger: AGCCCCTGGTCCCCTTGGTCAGCCTGCACAGTTACC...ACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR GCA 90 bp | AAGGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAACTGCCTCTGGGAGGTaGCGGGGCCTTCCAACACCA | + |
Preference number: 4 (lower is better) Translates to: KGPQSHMTVFWPLPYCSRTASGR*RGLPTP Trigger: TGGTGTTGGAAGGCCCCGGCACCTCCCAGAGGCAGT...TCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | AAGGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGGCAGGTGTTGCTGGTaGCATCACAAGACCGGCCTC | + |
Preference number: 4 (lower is better) Translates to: KGPQSHMTVFWPLPYCSRGRCCW*HHKTGL Trigger: GAGGCCGGTCTTGTGATGTCACCAGCAACACCTGCC...TCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR GCA 90 bp | GGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTCGAGACTTGCGGTCCTaGTTCAGTTGGGCTGTGAGG | + |
Preference number: 4 (lower is better) Translates to: GATVSHDCLLASSLLQPSRDLRS*FSWAVR Trigger: CCTCACAGCCCAACTGAAGCAGGACCGCAAGTCTCG...ACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | GCTCGGTCTTCGCTCCACGGTGAGCCTCATATCTCATCCAAATGTTTTCCAGCAGACCGGCCTCTCTGCTaGGTCCCAGAGCCACAGGTG | + |
Preference number: 4 (lower is better) Translates to: ARSSLHGEPHISSKCFPADRPLC*VPEPQV Trigger: CACCTGTGGCTCTGGGACCCAGCAGAGAGGCCGGTC...TGCTGGAAAACATTTGGATGAGATATGAGGCTCACCGTGGAGCGAAGACCGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | GGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTCCCCTTGTAGCGTGGTaGACAAGGCAGGCAGTGGAA | + |
Preference number: 4 (lower is better) Translates to: GATVSHDCLLASSLLQPSPLVAW*TRQAVE Trigger: TTCCACTGCCTGCCTTGTCCACCACGCTACAAGGGG...ACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR GCA 90 bp | GCTCGGTCTTCGCTCCACGGTGAGCCTCATATCTCATCCAAATGTTTTCCAGCAGCGTTCCCCGAGACTTaGGGTCCTGCTTCAGTTGGG | + |
Preference number: 4 (lower is better) Translates to: ARSSLHGEPHISSKCFPAAFPET*GPASVG Trigger: CCCAACTGAAGCAGGACCGCAAGTCTCGGGGAACGC...TGCTGGAAAACATTTGGATGAGATATGAGGCTCACCGTGGAGCGAAGACCGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR GCA 90 bp | ACGGTGAGCCTCATATCTCATCCAAATGTTTTCCAGCAGCAGGCTGGAAGCTCTCAAGACCGGCCTCTCTaGTGGGTCCCAGAGCCACAG | + |
Preference number: 4 (lower is better) Translates to: TVSLISHPNVFQQQAGSSQDRPL*WVPEPQ Trigger: CTGTGGCTCTGGGACCCAGCAGAGAGGCCGGTCTTG...AGAGCTTCCAGCCTGCTGCTGGAAAACATTTGGATGAGATATGAGGCTCACCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | GATCCTAGCAGTCAGTATGCAGAGTATGCAGAGCCTGATGACGTCCAGCCAGGTCGGTCCTGCTTCAGTTaGGCTGTGAGGAAGAAGCCC | + |
Preference number: 4 (lower is better) Translates to: DPSSQYAEYAEPDDVQPGRSCFS*AVRKKP Trigger: GGGCTTCTTCCTCACAGCCCAACTGAAGCAGGACCG...ACCTGGCTGGACGTCATCAGGCTCTGCATACTCTGCATACTGACTGCTAGGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | AAGGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTCACATTCTTCCACTaGGAGTCAGCCAGGCCCACA | + |
Preference number: 4 (lower is better) Translates to: KGPQSHMTVFWPLPYCSRVTFFH*ESARPT Trigger: TGTGGGCCTGGCTGACTCCCAGTGGAAGAATGTGAC...TCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | AAGGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAATGTCCTTGTCTGAATaGAGGGGCCCAGGCAGGTGT | + |
Preference number: 4 (lower is better) Translates to: KGPQSHMTVFWPLPYCSRMSLSE*RGPGRC Trigger: ACACCTGCCTGGGCCCCTCCATTCAGACAAGGACAT...TCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | GGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTTCCAGGTCCTCACAGTaGGTACCATTGCCCAGAAAG | + |
Preference number: 4 (lower is better) Translates to: GATVSHDCLLASSLLQPSSRSSQ*VPLPRK Trigger: CTTTCTGGGCAATGGTACCCACTGTGAGGACCTGGA...ACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | AAGGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGACTTCTACCCAGTAGTTaGGGTCCAAAGTGTCCCCTG | + |
Preference number: 4 (lower is better) Translates to: KGPQSHMTVFWPLPYCSRLLPSS*GPKCPL Trigger: CAGGGGACACTTTGGACCTCAACTACTGGGTAGAAG...TCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | GGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTTTGCAGGTGAGCAGGTaGTCTGATGGCAGACTGTTT | + |
Preference number: 4 (lower is better) Translates to: GATVSHDCLLASSLLQPSLQVSR*SDGRLF Trigger: AAACAGTCTGCCATCAGATCACCTGCTCACCTGCAA...ACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR GCA 90 bp | CTAGCAGCAGGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGTGCCCTTGCAGTTCTTaGCACCCATCTGGGGCACTG | + |
Preference number: 4 (lower is better) Translates to: LAAGTGKDAQTKILAVSMCPCSS*HPSGAL Trigger: CAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCA...CATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCCTGCTGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR GCA 90 bp | AAGGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTCTGTGTCGATCTGTaGTGGGTTGTGCACATAGGG | + |
Preference number: 4 (lower is better) Translates to: KGPQSHMTVFWPLPYCSRVCVDL*WVVHIG Trigger: CCCTATGTGCACAACCCAGCACAGATCGACACAGAC...TCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | GCATCTGCCAACTTATTTGCCAGTCTGTTTCCTAGCAGCAGGGACAGGAAAGGAGCCCTCGGAACTGCTTaGCACCGATGGTCTTCCGGT | + |
Preference number: 4 (lower is better) Translates to: ASANLFASLFPSSRDRKGALGTA*HRWSSG Trigger: ACCGGAAGACCATCGGTGCCAAGCAGTTCCGAGGGC...TCCTTTCCTGTCCCTGCTGCTAGGAAACAGACTGGCAAATAAGTTGGCAGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | GATCCTAGCAGTCAGTATGCAGAGTATGCAGAGCCTGATGACGTCCAGCCAGGTCCGTCCGAGTCTTCCTaGTCTGGGTTGAACACAAGC | + |
Preference number: 4 (lower is better) Translates to: DPSSQYAEYAEPDDVQPGPSESS*SGLNTS Trigger: GCTTGTGTTCAACCCAGACCAGGAAGACTCGGACGG...ACCTGGCTGGACGTCATCAGGCTCTGCATACTCTGCATACTGACTGCTAGGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | GGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTTTCTTGTGGCAGCTGTaGGTCTTGTCCTTACATGGA | + |
Preference number: 4 (lower is better) Translates to: GATVSHDCLLASSLLQPSFLWQL*VLSLHG Trigger: TCCATGTAAGGACAAGACTCACAGCTGCCACAAGAA...ACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGAGTCCTCCCCGCAGATaGGCCCATCACCTGCGTAGC | + |
Preference number: 4 (lower is better) Translates to: LTCAGLGNTVPQKSKKCRSPPRR*AHHLRS Trigger: GCTACGCAGGTGATGGGCTCATCTGCGGGGAGGACT...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | GGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTCTCTGCACTCATACTTaGGGTCCGAGAAATAGACCA | + |
Preference number: 4 (lower is better) Translates to: GATVSHDCLLASSLLQPSLCTHT*GPRNRP Trigger: TGGTCTATTTCTCGGACCTCAAGTATGAGTGCAGAG...ACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR GCA 90 bp | GGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTCCAGGTTTCATTTTCTaGAAAGATTCGGCCCTCCTG | + |
Preference number: 4 (lower is better) Translates to: GATVSHDCLLASSLLQPSPGFIF*KDSALL Trigger: CAGGAGGGCCGAATCTTTGCAGAAAATGAAACCTGG...ACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | CTAGCAGCAGGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCTCGAGATGCACCTTTaGCCACGTACATCCTGCTCC | + |
Preference number: 4 (lower is better) Translates to: LAAGTGKDAQTKILAVSMLEMHL*PRTSCS Trigger: GGAGCAGGATGTACGTGGCCAAAGGTGCATCTCGAG...CATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCCTGCTGCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR CAA 72 bp | ACACTGCCCAACCCAGGCAGGCAGCTGAAATGGACATaGCCTCTGCTGAGGTTTTCTTCTGAAAGCTCTGAG | + |
Preference number: 4 (lower is better) Translates to: TLPNPGRQLKWT*PLLRFSSESSE Trigger: CTCAGAGCTTTCAGAAGAAAACCTCAGCAGAGGCAATGTCCATTTCAGCTGCCTGCCTGGGTTGGGCAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | CCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGCTGGAGCTTCTGCAGCAAGCCCCTaGAGTGACTCTCTCGAGATG | + |
Preference number: 4 (lower is better) Translates to: PRWTDVSKKGCLQHIAGASAASP*SDSLEM Trigger: CATCTCGAGAGAGTCACTTCAGGGGCTTGCTGCAGA...AGCTCCAGCAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | GCATCTGCCAACTTATTTGCCAGTCTGTTTCCTAGCAGCAGGGACAGGAAAGGAGGCACAAGTTGCAGGTaGGCAGGTGATCTGATGGCA | + |
Preference number: 4 (lower is better) Translates to: ASANLFASLFPSSRDRKGGTSCR*AGDLMA Trigger: TGCCATCAGATCACCTGCTCACCTGCAACTTGTGCC...TCCTTTCCTGTCCCTGCTGCTAGGAAACAGACTGGCAAATAAGTTGGCAGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGCTGCATGTCCTTGTCTaGATGGAGGGGCCCAGGCAG | + |
Preference number: 4 (lower is better) Translates to: LTCAGLGNTVPQKSKKCRLHVLV*MEGPRQ Trigger: CTGCCTGGGCCCCTCCATTCAGACAAGGACATGCAG...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR GCA 90 bp | AAGGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGCCCTCCTTTCTCCTTaGAAGCTTGACAATCCTGTT | + |
Preference number: 4 (lower is better) Translates to: KGPQSHMTVFWPLPYCSRALLSP*KLDNPV Trigger: AACAGGATTGTCAAGCTTGCAAGGAGAAAGGAGGGC...TCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR GCA 90 bp | CTAGCAGCAGGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGAGTGGCCCAGGTAGATaGACTCTGCATTCTTGTGGC | + |
Preference number: 4 (lower is better) Translates to: LAAGTGKDAQTKILAVSMSGPGR*TLHSCG Trigger: GCCACAAGAATGCAGAGTGCATCTACCTGGGCCACT...CATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCCTGCTGCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | ACGGTGAGCCTCATATCTCATCCAAATGTTTTCCAGCAGCAGGCTGGAAGCTCTTCCTTCCCTCCATACTaGGGCTCAGGGCTGTTGCAA | + |
Preference number: 4 (lower is better) Translates to: TVSLISHPNVFQQQAGSSSFPPY*GSGLLQ Trigger: TTGCAACAGCCCTGAGCCCCAGTATGGAGGGAAGGA...AGAGCTTCCAGCCTGCTGCTGGAAAACATTTGGATGAGATATGAGGCTCACCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | GGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTGGATTGAAGAGAAGCTaGCAATTGTCCTTCTCATCG | + |
Preference number: 4 (lower is better) Translates to: GATVSHDCLLASSLLQPSGLKRS*QLSFSS Trigger: CGATGAGAAGGACAATTGCCAGCTTCTCTTCAATCC...ACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | CTAGCAGCAGGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGTGTGTCGATCTGTGCTaGGTTGTGCACATAGGGGCA | + |
Preference number: 4 (lower is better) Translates to: LAAGTGKDAQTKILAVSMCVDLC*VVHIGA Trigger: TGCCCCTATGTGCACAACCCAGCACAGATCGACACA...CATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCCTGCTGCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | GATCCTAGCAGTCAGTATGCAGAGTATGCAGAGCCTGATGACGTCCAGCCAGGTGCTGAAAAGGTCAAATaGAGTGTCCTTGACGTGGTC | + |
Preference number: 4 (lower is better) Translates to: DPSSQYAEYAEPDDVQPGAEKVK*SVLDVV Trigger: GACCACGTCAAGGACACTTCATTTGACCTTTTCAGC...ACCTGGCTGGACGTCATCAGGCTCTGCATACTCTGCATACTGACTGCTAGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | GGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCAGAGTATGGCTCCCTGGCTGTGTTaGCAGCCTTTCTTGCTTAAG | + |
Preference number: 4 (lower is better) Translates to: GTGKDAQTKILAVSMQSMAPWLC*QPFLLK Trigger: CTTAAGCAAGAAAGGCTGTCAACACAGCCAGGGAGC...CATACTCTGCATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | GCATCTGCCAACTTATTTGCCAGTCTGTTTCCTAGCAGCAGGGACAGGAAAGGAAGAGACGTATGCGGGTaGCATTGCCAACTCCACAAG | + |
Preference number: 4 (lower is better) Translates to: ASANLFASLFPSSRDRKGRDVCG*HCQLHK Trigger: CTTGTGGAGTTGGCAATGTCACCCGCATACGTCTCT...TCCTTTCCTGTCCCTGCTGCTAGGAAACAGACTGGCAAATAAGTTGGCAGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR GCA 90 bp | TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTACACTCGGTCCACTCTaGCCACGGAGACCAGCCCTC | + |
Preference number: 4 (lower is better) Translates to: YSPFKGCSFFVSVESALTTLGPL*PRRPAL Trigger: GAGGGCTGGTCTCCGTGGGCAGAGTGGACCGAGTGT...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR GCA 90 bp | CTAGCAGCAGGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCAGGTAGATGCACTCTaGATTCTTGTGGCAGCTGTG | + |
Preference number: 4 (lower is better) Translates to: LAAGTGKDAQTKILAVSMQVDAL*ILVAAV Trigger: CACAGCTGCCACAAGAATGCAGAGTGCATCTACCTG...CATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCCTGCTGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | GCTCGGTCTTCGCTCCACGGTGAGCCTCATATCTCATCCAAATGTTTTCCAGCACCACAAAAGATGGGTTaGCACAAGTTGCAGGTGAGC | + |
Preference number: 4 (lower is better) Translates to: ARSSLHGEPHISSKCFPAPQKMG*HKLQVS Trigger: GCTCACCTGCAACTTGTGCCAACCCATCTTTTGTGG...TGCTGGAAAACATTTGGATGAGATATGAGGCTCACCGTGGAGCGAAGACCGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTGCCCAGAAAGCCCACTaGGCAGGAGCCACAGGACCA | + |
Preference number: 4 (lower is better) Translates to: YSPFKGCSFFVSVESALTAQKAH*AGATGP Trigger: TGGTCCTGTGGCTCCTGCCCAGTGGGCTTTCTGGGC...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | GGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTTCATTGTTGTCACACTaGTCTCCAACGAGATCATTG | + |
Preference number: 4 (lower is better) Translates to: GATVSHDCLLASSLLQPSSLLSH*SPTRSL Trigger: CAATGATCTCGTTGGAGACCAGTGTGACAACAATGA...ACTCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | CTAGCAGCAGGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGTATGGGCAGTTGTCTTaGTTGTTCTGGTGGCCGTCA | + |
Preference number: 4 (lower is better) Translates to: LAAGTGKDAQTKILAVSMYGQLS*LFWWPS Trigger: TGACGGCCACCAGAACAACCAAGACAACTGCCCATA...CATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCCTGCTGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | ACGGTGAGCCTCATATCTCATCCAAATGTTTTCCAGCAGCAGGCTGGAAGCTCTTTTGTGTGGTCCCCTTaGGATCCAGAGGGACCATCT | + |
Preference number: 4 (lower is better) Translates to: TVSLISHPNVFQQQAGSSFVWSP*DPEGPS Trigger: AGATGGTCCCTCTGGATCCCAAGGGGACCACACAAA...AGAGCTTCCAGCCTGCTGCTGGAAAACATTTGGATGAGATATGAGGCTCACCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | GGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCAGAGTATGCTCCTGCACACAGGCTaGCATGTTTCTTGTCTTCAG | + |
Preference number: 4 (lower is better) Translates to: GTGKDAQTKILAVSMQSMLLHTG*HVSCLQ Trigger: CTGAAGACAAGAAACATGTCAGCCTGTGTGCAGGAG...CATACTCTGCATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | TTTTTAAACAAACAAGAAAAGGCAACACAGCGGAATGCTCGGTCTTCGCTCCACTCCCAGAGCCACAGGTaGCAGAACACTCGGTCCACT | + |
Preference number: 4 (lower is better) Translates to: FLNKQEKATQRNARSSLHSQSHR*QNTRST Trigger: AGTGGACCGAGTGTTCTGTCACCTGTGGCTCTGGGA...GTGGAGCGAAGACCGAGCATTCCGCTGTGTTGCCTTTTCTTGTTTGTTTAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | CACAAGTGCCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGCTTCCTGGTCTGGGTTaGACACAAGCCGACAGTTGT | + |
Preference number: 4 (lower is better) Translates to: HKCQDGLMCLRRGVCSTLLPGLG*TQADSC Trigger: ACAACTGTCGGCTTGTGTTCAACCCAGACCAGGAAG...CAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGGCACTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR GCA 90 bp | CGAGTTCACCTGATCTTTCTTCCTGTTCAGCCTCACAGGATTTGTGTGTCATTAGACACAATCTCAAACTaGCTCTGGGAGGTGCCGGGG | + |
Preference number: 4 (lower is better) Translates to: RVHLIFLPVQPHRICVSLDTISN*LWEVPG Trigger: CCCCGGCACCTCCCAGAGGCAGTTTGAGATTGTGTC...TAATGACACACAAATCCTGTGAGGCTGAACAGGAAGAAAGATCAGGTGAACTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR GCA 90 bp | CACAAGTGCCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGGTGTCACTGGCCACCTaGACAGTCACATTCTTCCAC | + |
Preference number: 4 (lower is better) Translates to: HKCQDGLMCLRRGVCSTLVSLAT*TVTFFH Trigger: GTGGAAGAATGTGACTGTGCAGGTGGCCAGTGACAC...CAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGGCACTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR GCA 90 bp | CCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGCTGGAGCTCATCAGGGAAGCTGTTaGACTTGGCTCCAGGAAAAC | + |
Preference number: 4 (lower is better) Translates to: PRWTDVSKKGCLQHIAGAHQGSC*TWLQEN Trigger: GTTTTCCTGGAGCCAAGTGCAACAGCTTCCCTGATG...AGCTCCAGCAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR GCA 90 bp | GGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCAGAGTATGTCTGCACCAGCTCTTTaGCTTGGTGACGAATTACCC | + |
Preference number: 4 (lower is better) Translates to: GTGKDAQTKILAVSMQSMSAPAL*LGDELP Trigger: GGGTAATTCGTCACCAAGGCAAAGAGCTGGTGCAGA...CATACTCTGCATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTATCTCAAACTGCCTCTaGGAGGTGCCGGGGCCTTCC | + |
Preference number: 4 (lower is better) Translates to: YSPFKGCSFFVSVESALTISNCL*EVPGPS Trigger: GGAAGGCCCCGGCACCTCCCAGAGGCAGTTTGAGAT...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | CCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGCTGGAGCTTCTGCAAACACGAGATaGACATTCTGCAGCAAGCCC | + |
Preference number: 4 (lower is better) Translates to: PRWTDVSKKGCLQHIAGASANTR*TFCSKP Trigger: GGGCTTGCTGCAGAATGTCCATCTCGTGTTTGCAGA...AGCTCCAGCAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | CTAGCAGCAGGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCTCTTGTTGCACATTTaGTGTTCTGTCACATCCCCG | + |
Preference number: 4 (lower is better) Translates to: LAAGTGKDAQTKILAVSMLLLHI*CSVTSP Trigger: CGGGGATGTGACAGAACACCAAATGTGCAACAAGAG...CATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCCTGCTGCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTGGACAAGGCAGGCAGTaGAAGCCCGGGTTGGTGTTG | + |
Preference number: 4 (lower is better) Translates to: YSPFKGCSFFVSVESALTGQGRQ*KPGLVL Trigger: CAACACCAACCCGGGCTTCCACTGCCTGCCTTGTCC...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | CACAAGTGCCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGCAAATGAAGTGTCCTTaGCGTGGTCACCAGCAGAAG | + |
Preference number: 4 (lower is better) Translates to: HKCQDGLMCLRRGVCSTLQMKCP*RGHQQK Trigger: CTTCTGCTGGTGACCACGTCAAGGACACTTCATTTG...CAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGGCACTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | CGAGTTCACCTGATCTTTCTTCCTGTTCAGCCTCACAGGATTTGTGTGTCATTAGCTTCAGTTGGGCTGTaGGGAAGAAGCCCTCCTTTC | + |
Preference number: 4 (lower is better) Translates to: RVHLIFLPVQPHRICVSLASVGL*GRSPPF Trigger: GAAAGGAGGGCTTCTTCCTCACAGCCCAACTGAAGC...TAATGACACACAAATCCTGTGAGGCTGAACAGGAAGAAAGATCAGGTGAACTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGACTGTCTGCAGAGTGTaGACAGGATGGACAGCACTC | + |
Preference number: 4 (lower is better) Translates to: LTCAGLGNTVPQKSKKCRTVCRV*TGWTAL Trigger: GAGTGCTGTCCATCCTGTTCACACTCTGCAGACAGT...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTCATCTGGGGCACTGGTaGGTTGCAGAGACGTATGCG | + |
Preference number: 4 (lower is better) Translates to: YSPFKGCSFFVSVESALTHLGHW*VAETYA Trigger: CGCATACGTCTCTGCAACTCACCAGTGCCCCAGATG...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | CGAGTTCACCTGATCTTTCTTCCTGTTCAGCCTCACAGGATTTGTGTGTCATTATGGGGCAGTTGTCCTTaGTGCAGTGGTAGGTGGCAT | + |
Preference number: 4 (lower is better) Translates to: RVHLIFLPVQPHRICVSLWGSCP*CSGRWH Trigger: ATGCCACCTACCACTGCATCAAGGACAACTGCCCCA...TAATGACACACAAATCCTGTGAGGCTGAACAGGAAGAAAGATCAGGTGAACTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | GGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCAGAGTATGCATAGAAAGTGCCACTaGAGTCCACAGACCCAAACT | + |
Preference number: 4 (lower is better) Translates to: GTGKDAQTKILAVSMQSMHRKCH*SPQTQT Trigger: AGTTTGGGTCTGTGGACTTCAGTGGCACTTTCTATG...CATACTCTGCATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR GCA 90 bp | TTTTTAAACAAACAAGAAAAGGCAACACAGCGGAATGCTCGGTCTTCGCTCCACGATGAGCCCATCACCTaGGTAGCCAATCTGGCACTC | + |
Preference number: 4 (lower is better) Translates to: FLNKQEKATQRNARSSLHDEPIT*VANLAL Trigger: GAGTGCCAGATTGGCTACGCAGGTGATGGGCTCATC...GTGGAGCGAAGACCGAGCATTCCGCTGTGTTGCCTTTTCTTGTTTGTTTAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR GCA 90 bp | CACAAGTGCCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGTCTGAGTTTGCTGTCTaGACCAGCTCTTTGCCTTGG | + |
Preference number: 4 (lower is better) Translates to: HKCQDGLMCLRRGVCSTLSEFAV*TSSLPW Trigger: CCAAGGCAAAGAGCTGGTGCAGACAGCAAACTCAGA...CAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGGCACTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTACCAGCAGAAGCTCTTaGCCCTATGCCCAGAGCCAG | + |
Preference number: 4 (lower is better) Translates to: YSPFKGCSFFVSVESALTTSRSS*PYAQSQ Trigger: CTGGCTCTGGGCATAGGGCCAAGAGCTTCTGCTGGT...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | GCATCTGCCAACTTATTTGCCAGTCTGTTTCCTAGCAGCAGGGACAGGAAAGGACTGATCGATCTGATCTaGGTTGTGCATCAGAGGACA | + |
Preference number: 4 (lower is better) Translates to: ASANLFASLFPSSRDRKGLIDLI*VVHQRT Trigger: TGTCCTCTGATGCACAACCCAGATCAGATCGATCAG...TCCTTTCCTGTCCCTGCTGCTAGGAAACAGACTGGCAAATAAGTTGGCAGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | CCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGCTGGAGCTTCCAGCCAATGTTTTTaGGGTCATGCCATAGAGTCC | + |
Preference number: 4 (lower is better) Translates to: PRWTDVSKKGCLQHIAGASSQCF*GHAIES Trigger: GGACTCTATGGCATGACCCCAAAAACATTGGCTGGA...AGCTCCAGCAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | ACGGTGAGCCTCATATCTCATCCAAATGTTTTCCAGCAGCAGGCTGGAAGCTCTCTAATTGACGGGGATTaGAGAGAAGCTGGCAATTGT | + |
Preference number: 4 (lower is better) Translates to: TVSLISHPNVFQQQAGSSLIDGD*REAGNC Trigger: ACAATTGCCAGCTTCTCTTCAATCCCCGTCAATTAG...AGAGCTTCCAGCCTGCTGCTGGAAAACATTTGGATGAGATATGAGGCTCACCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR GCA 90 bp | GGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCAGAGTATGGGCAGCTTCTCTTGTTaGACATTTGGTGTTCTGTCA | + |
Preference number: 4 (lower is better) Translates to: GTGKDAQTKILAVSMQSMGSFSC*TFGVLS Trigger: TGACAGAACACCAAATGTGCAACAAGAGAAGCTGCC...CATACTCTGCATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | GGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCAGAGTATGCATCCTCCAGGAAGTTaGTATGCTGATTGCCTTCTA | + |
Preference number: 4 (lower is better) Translates to: GTGKDAQTKILAVSMQSMHPPGS*YADCLL Trigger: TAGAAGGCAATCAGCATACCAACTTCCTGGAGGATG...CATACTCTGCATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGGCCTTCCACAAAAGATaGGTTGGCACAAGTTGCAGG | + |
Preference number: 4 (lower is better) Translates to: LTCAGLGNTVPQKSKKCRAFHKR*VGTSCR Trigger: CCTGCAACTTGTGCCAACCCATCTTTTGTGGAAGGC...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTACACCAGGTTGTTGTTaGGCCAGCCATCCAGGTCTG | + |
Preference number: 4 (lower is better) Translates to: YSPFKGCSFFVSVESALTTPGCC*ASHPGL Trigger: CAGACCTGGATGGCTGGCCCAACAACAACCTGGTGT...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | CGAGTTCACCTGATCTTTCTTCCTGTTCAGCCTCACAGGATTTGTGTGTCATTACGAGTCTTCCTGGTCTaGGTTGAACACAAGCCGACA | + |
Preference number: 4 (lower is better) Translates to: RVHLIFLPVQPHRICVSLRVFLV*VEHKPT Trigger: TGTCGGCTTGTGTTCAACCCAGACCAGGAAGACTCG...TAATGACACACAAATCCTGTGAGGCTGAACAGGAAGAAAGATCAGGTGAACTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | TTTTTAAACAAACAAGAAAAGGCAACACAGCGGAATGCTCGGTCTTCGCTCCACAGCTCTTTGCCTTGGTaGCGAATTACCCAGTTGGGA | + |
Preference number: 4 (lower is better) Translates to: FLNKQEKATQRNARSSLHSSLPW*RITQLG Trigger: TCCCAACTGGGTAATTCGTCACCAAGGCAAAGAGCT...GTGGAGCGAAGACCGAGCATTCCGCTGTGTTGCCTTTTCTTGTTTGTTTAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | GCTCGGTCTTCGCTCCACGGTGAGCCTCATATCTCATCCAAATGTTTTCCAGCACTTACATGGATTCTCTaGCTCACACACTTGTTTTTC | + |
Preference number: 4 (lower is better) Translates to: ARSSLHGEPHISSKCFPALTWIL*LTHLFF Trigger: GAAAAACAAGTGTGTGAGCCAGAGAATCCATGTAAG...TGCTGGAAAACATTTGGATGAGATATGAGGCTCACCGTGGAGCGAAGACCGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | CACAAGTGCCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGGGAGTTGGAGATGTATaGGCAGTTGTCTTGGTTGTT | + |
Preference number: 4 (lower is better) Translates to: HKCQDGLMCLRRGVCSTLGVGDV*AVVLVV Trigger: AACAACCAAGACAACTGCCCATACATCTCCAACTCC...CAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGGCACTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | CACAAGTGCCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGGACGAATTACCCAGTTaGGATCAATTTGTGTGGTCC | + |
Preference number: 4 (lower is better) Translates to: HKCQDGLMCLRRGVCSTLDELPS*DQFVWS Trigger: GGACCACACAAATTGATCCCAACTGGGTAATTCGTC...CAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGGCACTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR CAA 72 bp | GCTGGAAGCTCTTGGAGTGCAATTGATGTTTCTCCTTaGAAGACACTTGGACTTGGTGCTGATGAAGGAGGT | + |
Preference number: 4 (lower is better) Translates to: AGSSWSAIDVSP*KTLGLGADEGG Trigger: ACCTCCTTCATCAGCACCAAGTCCAAGTGTCTTCAAAGGAGAAACATCAATTGCACTCCAAGAGCTTCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGAGAAGCAAATATCTGTaGCCACAGCACACTCATCCA | + |
Preference number: 4 (lower is better) Translates to: LTCAGLGNTVPQKSKKCRRSKYL*PQHTHP Trigger: TGGATGAGTGTGCTGTGGTCACAGATATTTGCTTCT...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR TCA 90 bp | CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGGTCATAAATTGGTCCTaGGTCAGCCATGACTTGCTT | + |
Preference number: 4 (lower is better) Translates to: LTCAGLGNTVPQKSKKCRVINWS*VSHDLL Trigger: AAGCAAGTCATGGCTGACTCAGGACCAATTTATGAC...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR GCA 90 bp | GGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCAGAGTATGATCTTCCACAGAATCTaGAAACACGAGATGGACATT | + |
Preference number: 4 (lower is better) Translates to: GTGKDAQTKILAVSMQSMIFHRI*KHEMDI Trigger: AATGTCCATCTCGTGTTTGCAGATTCTGTGGAAGAT...CATACTCTGCATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR GCA 90 bp | CCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGCTGGAGCTGTTGACAGCCTTTCTTaGTTAAGATATCTTCCACAG | + |
Preference number: 4 (lower is better) Translates to: PRWTDVSKKGCLQHIAGAVDSLS*LRYLPQ Trigger: CTGTGGAAGATATCTTAAGCAAGAAAGGCTGTCAAC...AGCTCCAGCAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR GCA 90 bp | GATAACAAGAAACAAGGAAACTCACCCTCAGAGATTTCAACACAAATAACTCCACGTACACACCTCCTGTaGCTTCTCCACACCCTGGAC | + |
Preference number: 4 (lower is better) Translates to: DNKKQGNSPSEISTQITPRTHLL*LLHTLD Trigger: GTCCAGGGTGTGGAGAAGGCACAGGAGGTGTGTACG...TGGAGTTATTTGTGTTGAAATCTCTGAGGGTGAGTTTCCTTGTTTCTTGTTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR GCA 90 bp | TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTAAGATTCGGCCCTCCTaGACACAGGCTGACATGTTT | + |
Preference number: 4 (lower is better) Translates to: YSPFKGCSFFVSVESALTKIRPS*TQADMF Trigger: AAACATGTCAGCCTGTGTGCAGGAGGGCCGAATCTT...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | TTTTTAAACAAACAAGAAAAGGCAACACAGCGGAATGCTCGGTCTTCGCTCCACATCATCTGTGTTCACTaGGGGGATGTAGTCAAACCG | + |
Preference number: 4 (lower is better) Translates to: FLNKQEKATQRNARSSLHIICVH*GDVVKP Trigger: CGGTTTGACTACATCCCCCCAGTGAACACAGATGAT...GTGGAGCGAAGACCGAGCATTCCGCTGTGTTGCCTTTTCTTGTTTGTTTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGAGTCTTGTCCTTACATaGATTCTCTGGCTCACACAC | + |
Preference number: 4 (lower is better) Translates to: LTCAGLGNTVPQKSKKCRSLVLT*ILWLTH Trigger: GTGTGTGAGCCAGAGAATCCATGTAAGGACAAGACT...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR GCA 90 bp | TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTCCACATAGAAGCGGCTaGTTGACTGATAGCCAAAGA | + |
Preference number: 4 (lower is better) Translates to: YSPFKGCSFFVSVESALTPHRSG*LTDSQR Trigger: TCTTTGGCTATCAGTCAAGCAGCCGCTTCTATGTGG...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR GCA 90 bp | GATAACAAGAAACAAGGAAACTCACCCTCAGAGATTTCAACACAAATAACTCCAGTGACTCTCTCGAGATaGACCTTTGGCCACGTACAT | + |
Preference number: 4 (lower is better) Translates to: DNKKQGNSPSEISTQITPVTLSR*TFGHVH Trigger: ATGTACGTGGCCAAAGGTGCATCTCGAGAGAGTCAC...TGGAGTTATTTGTGTTGAAATCTCTGAGGGTGAGTTTCCTTGTTTCTTGTTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | GATCAAAATCGTGGATTCTTTCTGTCTAACTTAGAAATGCAGTTGCCATTACTACATGGTCAGCCTGGTTaGAGTTGGAGATGTATGGGC | + |
Preference number: 4 (lower is better) Translates to: DQNRGFFLSNLEMQLPLLHGQPG*SWRCMG Trigger: GCCCATACATCTCCAACTCCAACCAGGCTGACCATG...TAGTAATGGCAACTGCATTTCTAAGTTAGACAGAAAGAATCCACGATTTTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | GATAACAAGAAACAAGGAAACTCACCCTCAGAGATTTCAACACAAATAACTCCATGGGATCAATTTGTGTaGTCCCCTTGGGATCCAGAG | + |
Preference number: 4 (lower is better) Translates to: DNKKQGNSPSEISTQITPWDQFV*SPWDPE Trigger: CTCTGGATCCCAAGGGGACCACACAAATTGATCCCA...TGGAGTTATTTGTGTTGAAATCTCTGAGGGTGAGTTTCCTTGTTTCTTGTTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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3UTR CAA 72 bp | TCACCTGATCTTTCTTCCTGTTCAGCCTCACAGGATTaGTGTGTCATTATAGAACAGCACGAATCCAAAAAC | + |
Preference number: 4 (lower is better) Translates to: SPDLSSCSASQD*CVIIEQHESKN Trigger: GTTTTTGGATTCGTGCTGTTCTATAATGACACACAAATCCTGTGAGGCTGAACAGGAAGAAAGATCAGGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | TTTTTAAACAAACAAGAAAAGGCAACACAGCGGAATGCTCGGTCTTCGCTCCACAGTGTTGTAGACATATaGACAATTGTCTCGCTCATT | + |
Preference number: 4 (lower is better) Translates to: FLNKQEKATQRNARSSLHSVVDI*TIVSLI Trigger: AATGAGCGAGACAATTGTCCATATGTCTACAACACT...GTGGAGCGAAGACCGAGCATTCCGCTGTGTTGCCTTTTCTTGTTTGTTTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | GATAACAAGAAACAAGGAAACTCACCCTCAGAGATTTCAACACAAATAACTCCATCCAGAGGGACCATCTaGAAGTTTCTGAAGTCTGTC | + |
Preference number: 4 (lower is better) Translates to: DNKKQGNSPSEISTQITPSRGTI*KFLKSV Trigger: GACAGACTTCAGAAACTTCCAGATGGTCCCTCTGGA...TGGAGTTATTTGTGTTGAAATCTCTGAGGGTGAGTTTCCTTGTTTCTTGTTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CCA 90 bp | GATCAAAATCGTGGATTCTTTCTGTCTAACTTAGAAATGCAGTTGCCATTACTATCTTGGTTGTTCTGGTaGCCGTCATCATCTATGTCC | + |
Preference number: 4 (lower is better) Translates to: DQNRGFFLSNLEMQLPLLSWLFW*PSSSMS Trigger: GGACATAGATGATGACGGCCACCAGAACAACCAAGA...TAGTAATGGCAACTGCATTTCTAAGTTAGACAGAAAGAATCCACGATTTTGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 90 bp | GGGGACCAGGGGCTCCAGCGGCCATCAATTGGGCACGGATCACGCTaGCAGGGTTTGGTTTCCCGGCCGCTGCCCTTGCAGTTCTTGCCA | + |
Preference number: 5 (lower is better) Translates to: GDQGLQRPSIGHGSR*QGLVSRPLPLQFLP Trigger: TGGCAAGAACTGCAAGGGCAGCGGCCGGGAAACCAAACCCTGTCAGCGTGATCCGTGCCCAATTGATGGCCGCTGGAGCCCCTGGTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS GCA 90 bp | CACGCTGACAGGGTTTGGTTTCCCGGCCGCTGCCCTTGCAGTTCTTaGCACCCATCTGGGGCACTGGTGAGTTGCAGAGACGTATGCGGG | + |
Preference number: 5 (lower is better) Translates to: HADRVWFPGRCPCSS*HPSGALVSCRDVCG Trigger: CCCGCATACGTCTCTGCAACTCACCAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCAGCGGCCGGGAAACCAAACCCTGTCAGCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS GCA 90 bp | GGCACGGATCACGCTGACAGGGTTTGGTTTCCCGGCCGCTGCCCTTaGAGTTCTTGCCACCCATCTGGGGCACTGGTGAGTTGCAGAGAC | + |
Preference number: 5 (lower is better) Translates to: GTDHADRVWFPGRCP*SSCHPSGALVSCRD Trigger: GTCTCTGCAACTCACCAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCAGCGGCCGGGAAACCAAACCCTGTCAGCGTGATCCGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CCA 90 bp | CCCAGGCAGGTGTTGCTGGTGACATCACAAGACCGGCCTCTCTGCTaGGTCCCAGAGCCACAGGTGACAGAACACTCGGTCCACTCTGCC | + |
Preference number: 5 (lower is better) Translates to: PRQVLLVTSQDRPLC*VPEPQVTEHSVHSA Trigger: GGCAGAGTGGACCGAGTGTTCTGTCACCTGTGGCTCTGGGACCCAGCAGAGAGGCCGGTCTTGTGATGTCACCAGCAACACCTGCCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 90 bp | TGCATGTCCTTGTCTGAATGGAGGGGCCCAGGCAGGTGTTGCTGGTaGCATCACAAGACCGGCCTCTCTGCTGGGTCCCAGAGCCACAGG | + |
Preference number: 5 (lower is better) Translates to: CMSLSEWRGPGRCCW*HHKTGLSAGSQSHR Trigger: CCTGTGGCTCTGGGACCCAGCAGAGAGGCCGGTCTTGTGATGTCACCAGCAACACCTGCCTGGGCCCCTCCATTCAGACAAGGACATGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS GCA 90 bp | CCGGGGCCTTCCAACACCAGGAGCGTTCCCCGAGACTTGCGGTCCTaGTTCAGTTGGGCTGTGAGGAAGAAGCCCTCCTTTCTCCTTGCA | + |
Preference number: 5 (lower is better) Translates to: PGPSNTRSVPRDLRS*FSWAVRKKPSFLLA Trigger: TGCAAGGAGAAAGGAGGGCTTCTTCCTCACAGCCCAACTGAAGCAGGACCGCAAGTCTCGGGGAACGCTCCTGGTGTTGGAAGGCCCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS GCA 90 bp | CAATTGGGCACGGATCACGCTGACAGGGTTTGGTTTCCCGGCCGCTaGCCTTGCAGTTCTTGCCACCCATCTGGGGCACTGGTGAGTTGC | + |
Preference number: 5 (lower is better) Translates to: QLGTDHADRVWFPGR*PCSSCHPSGALVSC Trigger: GCAACTCACCAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCAGCGGCCGGGAAACCAAACCCTGTCAGCGTGATCCGTGCCCAATTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CCA 90 bp | ATCCTCCAGGCCAACACCGAAGGGTTGGTTCCCCTTGTAGCGTGGTaGACAAGGCAGGCAGTGGAAGCCCGGGTTGGTGTTGACACAGCG | + |
Preference number: 5 (lower is better) Translates to: ILQANTEGLVPLVAW*TRQAVEARVGVDTA Trigger: CGCTGTGTCAACACCAACCCGGGCTTCCACTGCCTGCCTTGTCCACCACGCTACAAGGGGAACCAACCCTTCGGTGTTGGCCTGGAGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 90 bp | CCGGCCGCTGCCCTTGCAGTTCTTGCCACCCATCTGGGGCACTGGTaGGTTGCAGAGACGTATGCGGGTGACATTGCCAACTCCACAAGT | + |
Preference number: 5 (lower is better) Translates to: PAAALAVLATHLGHW*VAETYAGDIANSTS Trigger: ACTTGTGGAGTTGGCAATGTCACCCGCATACGTCTCTGCAACTCACCAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCAGCGGCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS GCA 90 bp | TTGAGGTCCAAAGTGTCCCCTGGGCCATTGGACACAATCTCAAACTaGCTCTGGGAGGTGCCGGGGCCTTCCAACACCAGGAGCGTTCCC | + |
Preference number: 5 (lower is better) Translates to: LRSKVSPGPLDTISN*LWEVPGPSNTRSVP Trigger: GGGAACGCTCCTGGTGTTGGAAGGCCCCGGCACCTCCCAGAGGCAGTTTGAGATTGTGTCCAATGGCCCAGGGGACACTTTGGACCTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CCA 90 bp | GGTTTGGTTTCCCGGCCGCTGCCCTTGCAGTTCTTGCCACCCATCTaGGGCACTGGTGAGTTGCAGAGACGTATGCGGGTGACATTGCCA | + |
Preference number: 5 (lower is better) Translates to: GLVSRPLPLQFLPPI*GTGELQRRMRVTLP Trigger: TGGCAATGTCACCCGCATACGTCTCTGCAACTCACCAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCAGCGGCCGGGAAACCAAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 90 bp | TGCCACCCATCTGGGGCACTGGTGAGTTGCAGAGACGTATGCGGGTaGCATTGCCAACTCCACAAGTCACGGAGCATGAAGACCAGGGTG | + |
Preference number: 5 (lower is better) Translates to: CHPSGALVSCRDVCG*HCQLHKSRSMKTRV Trigger: CACCCTGGTCTTCATGCTCCGTGACTTGTGGAGTTGGCAATGTCACCCGCATACGTCTCTGCAACTCACCAGTGCCCCAGATGGGTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS GCA 90 bp | TCCAGCCTCCATTCTGACGGATTCTCGTATCACATTTGCCCAGGCTaGATGTCCTTGTCTGAATGGAGGGGCCCAGGCAGGTGTTGCTGG | + |
Preference number: 5 (lower is better) Translates to: SSLHSDGFSYHICPG*MSLSEWRGPGRCCW Trigger: CCAGCAACACCTGCCTGGGCCCCTCCATTCAGACAAGGACATGCAGCCTGGGCAAATGTGATACGAGAATCCGTCAGAATGGAGGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CCA 90 bp | TCCAACACCAGGAGCGTTCCCCGAGACTTGCGGTCCTGCTTCAGTTaGGCTGTGAGGAAGAAGCCCTCCTTTCTCCTTGCAAGCTTGACA | + |
Preference number: 5 (lower is better) Translates to: SNTRSVPRDLRSCFS*AVRKKPSFLLASLT Trigger: TGTCAAGCTTGCAAGGAGAAAGGAGGGCTTCTTCCTCACAGCCCAACTGAAGCAGGACCGCAAGTCTCGGGGAACGCTCCTGGTGTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | GATCCTAGCAGTCAGTATGCAGAGTATGCAGAGCCTGATGACGTCCAGCCAGGTCACCAGCAGAAGCTCTaGGCCCTATGCCCAGAGCCA | + |
Preference number: 5 (lower is better) Translates to: DPSSQYAEYAEPDDVQPGHQQKL*ALCPEP Trigger: TGGCTCTGGGCATAGGGCCAAGAGCTTCTGCTGGTG...ACCTGGCTGGACGTCATCAGGCTCTGCATACTCTGCATACTGACTGCTAGGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | AAGGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAGTAGCACACACCAGGTaGTTGTTGGGCCAGCCATCC | + |
Preference number: 5 (lower is better) Translates to: KGPQSHMTVFWPLPYCSRVAHTR*LLGQPS Trigger: GGATGGCTGGCCCAACAACAACCTGGTGTGTGCTAC...TCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CCA 90 bp | AAGCAAATATCTGTGACCACAGCACACTCATCCAGGTCCTCACAGTaGGTACCATTGCCCAGAAAGCCCACTGGGCAGGAGCCACAGGAC | + |
Preference number: 5 (lower is better) Translates to: KQISVTTAHSSRSSQ*VPLPRKPTGQEPQD Trigger: GTCCTGTGGCTCCTGCCCAGTGGGCTTTCTGGGCAATGGTACCCACTGTGAGGACCTGGATGAGTGTGCTGTGGTCACAGATATTTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 90 bp | AAATGTCACCTCGGCCGTCACCGTCCGAGTCTTCCTGGTCTGGGTTaGACACAAGCCGACAGTTGTCCCTGTCATCTGGAACACCATCAT | + |
Preference number: 5 (lower is better) Translates to: KCHLGRHRPSLPGLG*TQADSCPCHLEHHH Trigger: ATGATGGTGTTCCAGATGACAGGGACAACTGTCGGCTTGTGTTCAACCCAGACCAGGAAGACTCGGACGGTGACGGCCGAGGTGACATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CCA 90 bp | TTTACAAATGTCACCTCGGCCGTCACCGTCCGAGTCTTCCTGGTCTaGGTTGAACACAAGCCGACAGTTGTCCCTGTCATCTGGAACACC | + |
Preference number: 5 (lower is better) Translates to: FTNVTSAVTVRVFLV*VEHKPTVVPVIWNT Trigger: GGTGTTCCAGATGACAGGGACAACTGTCGGCTTGTGTTCAACCCAGACCAGGAAGACTCGGACGGTGACGGCCGAGGTGACATTTGTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | AAGGGGCCACAGTCTCACATGACTGTCTTCTGGCCTCTTCCTTACTGCAGCCGAAGGCTGACATGTTTCTaGTCTTCAGAGGGCCCCCAA | + |
Preference number: 5 (lower is better) Translates to: KGPQSHMTVFWPLPYCSRRLTCF*SSEGPQ Trigger: TTGGGGGCCCTCTGAAGACAAGAAACATGTCAGCCT...TCGGCTGCAGTAAGGAAGAGGCCAGAAGACAGTCATGTGAGACTGTGGCCCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | GATCCTAGCAGTCAGTATGCAGAGTATGCAGAGCCTGATGACGTCCAGCCAGGTTCCCCCTCGCCATTGTaGTCTGTGTCGATCTGTGCT | + |
Preference number: 5 (lower is better) Translates to: DPSSQYAEYAEPDDVQPGSPSPL*SVSICA Trigger: AGCACAGATCGACACAGACAACAATGGCGAGGGGGA...ACCTGGCTGGACGTCATCAGGCTCTGCATACTCTGCATACTGACTGCTAGGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 90 bp | GAATCTGCAAACACGAGATGGACATTCTGCAGCAAGCCCCTGAAGTaGCTCTCTCGAGATGCACCTTTGGCCACGTACATCCTGCTCCTG | + |
Preference number: 5 (lower is better) Translates to: ESANTRWTFCSKPLK*LSRDAPLATYILLL Trigger: CAGGAGCAGGATGTACGTGGCCAAAGGTGCATCTCGAGAGAGTCACTTCAGGGGCTTGCTGCAGAATGTCCATCTCGTGTTTGCAGATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 90 bp | CCACAGAATCTGCAAACACGAGATGGACATTCTGCAGCAAGCCCCTaGAGTGACTCTCTCGAGATGCACCTTTGGCCACGTACATCCTGC | + |
Preference number: 5 (lower is better) Translates to: PQNLQTRDGHSAASP*SDSLEMHLWPRTSC Trigger: GCAGGATGTACGTGGCCAAAGGTGCATCTCGAGAGAGTCACTTCAGGGGCTTGCTGCAGAATGTCCATCTCGTGTTTGCAGATTCTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 90 bp | TCCTGTGCCTTCTCCACACCCTGGACCACGAGATCTGTGGTGATGTaGGGGCTCAGATGGAGAGTCTCTGTATGTTCACTGATGGTGTTG | + |
Preference number: 5 (lower is better) Translates to: SCAFSTPWTTRSVVM*GLRWRVSVCSLMVL Trigger: CAACACCATCAGTGAACATACAGAGACTCTCCATCTGAGCCCTCACATCACCACAGATCTCGTGGTCCAGGGTGTGGAGAAGGCACAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 90 bp | GTGGAAGCCCGGGTTGGTGTTGACACAGCGGGGAGCTTTGTTAGTTaGGAAGCAAATATCTGTGACCACAGCACACTCATCCAGGTCCTC | + |
Preference number: 5 (lower is better) Translates to: VEARVGVDTAGSFVS*EANICDHSTLIQVL Trigger: GAGGACCTGGATGAGTGTGCTGTGGTCACAGATATTTGCTTCTCAACTAACAAAGCTCCCCGCTGTGTCAACACCAACCCGGGCTTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | CACAAGTGCCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGGCGGTCCTGCTTCAGTaGGGCTGTGAGGAAGAAGCC | + |
Preference number: 5 (lower is better) Translates to: HKCQDGLMCLRRGVCSTLAVLLQ*GCEEEA Trigger: GGCTTCTTCCTCACAGCCCAACTGAAGCAGGACCGC...CAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGGCACTTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | TTTTTAAACAAACAAGAAAAGGCAACACAGCGGAATGCTCGGTCTTCGCTCCACTCCCGGCCGCTGCCCTaGCAGTTCTTGCCACCCATC | + |
Preference number: 5 (lower is better) Translates to: FLNKQEKATQRNARSSLHSRPLP*QFLPPI Trigger: GATGGGTGGCAAGAACTGCAAGGGCAGCGGCCGGGA...GTGGAGCGAAGACCGAGCATTCCGCTGTGTTGCCTTTTCTTGTTTGTTTAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | ACGGTGAGCCTCATATCTCATCCAAATGTTTTCCAGCAGCAGGCTGGAAGCTCTGGGAAGCTGTTGCACTaGGCTCCAGGAAAACACGGG | + |
Preference number: 5 (lower is better) Translates to: TVSLISHPNVFQQQAGSSGKLLH*APGKHG Trigger: CCCGTGTTTTCCTGGAGCCAAGTGCAACAGCTTCCC...AGAGCTTCCAGCCTGCTGCTGGAAAACATTTGGATGAGATATGAGGCTCACCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | GCATCTGCCAACTTATTTGCCAGTCTGTTTCCTAGCAGCAGGGACAGGAAAGGACACACCAGGTTGTTGTaGGGCCAGCCATCCAGGTCT | + |
Preference number: 5 (lower is better) Translates to: ASANLFASLFPSSRDRKGHTRLL*GQPSRS Trigger: AGACCTGGATGGCTGGCCCAACAACAACCTGGTGTG...TCCTTTCCTGTCCCTGCTGCTAGGAAACAGACTGGCAAATAAGTTGGCAGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | GATCCTAGCAGTCAGTATGCAGAGTATGCAGAGCCTGATGACGTCCAGCCAGGTTGCATCAGAGGACAATaGTCACAGTGGTCACCCACG | + |
Preference number: 5 (lower is better) Translates to: DPSSQYAEYAEPDDVQPGCIRGQ*SQWSPT Trigger: CGTGGGTGACCACTGTGACAATTGTCCTCTGATGCA...ACCTGGCTGGACGTCATCAGGCTCTGCATACTCTGCATACTGACTGCTAGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | GATCCTAGCAGTCAGTATGCAGAGTATGCAGAGCCTGATGACGTCCAGCCAGGTTCAGCCTGGTTGGAGTaGGAGATGTATGGGCAGTTG | + |
Preference number: 5 (lower is better) Translates to: DPSSQYAEYAEPDDVQPGSAWLE*EMYGQL Trigger: CAACTGCCCATACATCTCCAACTCCAACCAGGCTGA...ACCTGGCTGGACGTCATCAGGCTCTGCATACTCTGCATACTGACTGCTAGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | CTAGCAGCAGGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGTGCCAGGGTCTGAGTTaGCTGTCTGCACCAGCTCTT | + |
Preference number: 5 (lower is better) Translates to: LAAGTGKDAQTKILAVSMCQGLS*LSAPAL Trigger: AAGAGCTGGTGCAGACAGCAAACTCAGACCCTGGCA...CATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCCTGCTGCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 90 bp | ATGCCAGGGTCTGAGTTTGCTGTCTGCACCAGCTCTTTGCCTTGGTaGCGAATTACCCAGTTGGGATCAATTTGTGTGGTCCCCTTGGGA | + |
Preference number: 5 (lower is better) Translates to: MPGSEFAVCTSSLPW*RITQLGSICVVPLG Trigger: TCCCAAGGGGACCACACAAATTGATCCCAACTGGGTAATTCGTCACCAAGGCAAAGAGCTGGTGCAGACAGCAAACTCAGACCCTGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS GCA 90 bp | GTCCTGCTTCAGTTGGGCTGTGAGGAAGAAGCCCTCCTTTCTCCTTaGAAGCTTGACAATCCTGTTGAGATCATCTGTGTTCACTGGGGG | + |
Preference number: 5 (lower is better) Translates to: VLLQLGCEEEALLSP*KLDNPVEIICVHWG Trigger: CCCCCAGTGAACACAGATGATCTCAACAGGATTGTCAAGCTTGCAAGGAGAAAGGAGGGCTTCTTCCTCACAGCCCAACTGAAGCAGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | ACGGTGAGCCTCATATCTCATCCAAATGTTTTCCAGCAGCAGGCTGGAAGCTCTGTGTCCCCTGGGCCATaGGACACAATCTCAAACTGC | + |
Preference number: 5 (lower is better) Translates to: TVSLISHPNVFQQQAGSSVSPGP*DTISNC Trigger: GCAGTTTGAGATTGTGTCCAATGGCCCAGGGGACAC...AGAGCTTCCAGCCTGCTGCTGGAAAACATTTGGATGAGATATGAGGCTCACCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | GCATCTGCCAACTTATTTGCCAGTCTGTTTCCTAGCAGCAGGGACAGGAAAGGACGTATGCGGGTGACATaGCCAACTCCACAAGTCACG | + |
Preference number: 5 (lower is better) Translates to: ASANLFASLFPSSRDRKGRMRVT*PTPQVT Trigger: CGTGACTTGTGGAGTTGGCAATGTCACCCGCATACG...TCCTTTCCTGTCCCTGCTGCTAGGAAACAGACTGGCAAATAAGTTGGCAGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | GCTCGGTCTTCGCTCCACGGTGAGCCTCATATCTCATCCAAATGTTTTCCAGCACCATCAGGGAAGCTGTaGCACTTGGCTCCAGGAAAA | + |
Preference number: 5 (lower is better) Translates to: ARSSLHGEPHISSKCFPAPSGKL*HLAPGK Trigger: TTTTCCTGGAGCCAAGTGCAACAGCTTCCCTGATGG...TGCTGGAAAACATTTGGATGAGATATGAGGCTCACCGTGGAGCGAAGACCGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | CGAGTTCACCTGATCTTTCTTCCTGTTCAGCCTCACAGGATTTGTGTGTCATTACAGTGGAAGCCCGGGTaGGTGTTGACACAGCGGGGA | + |
Preference number: 5 (lower is better) Translates to: RVHLIFLPVQPHRICVSLQWKPG*VLTQRG Trigger: TCCCCGCTGTGTCAACACCAACCCGGGCTTCCACTG...TAATGACACACAAATCCTGTGAGGCTGAACAGGAAGAAAGATCAGGTGAACTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS GCA 90 bp | CTATCCACAACCCAGGTTTCATTTTCTGCAAAGATTCGGCCCTCCTaGACACAGGCTGACATGTTTCTTGTCTTCAGAGGGCCCCCAATG | + |
Preference number: 5 (lower is better) Translates to: LSTTQVSFSAKIRPS*TQADMFLVFRGPPM Trigger: CATTGGGGGCCCTCTGAAGACAAGAAACATGTCAGCCTGTGTGCAGGAGGGCCGAATCTTTGCAGAAAATGAAACCTGGGTTGTGGATAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | GATCCTAGCAGTCAGTATGCAGAGTATGCAGAGCCTGATGACGTCCAGCCAGGTTCTATGTCCTCATTGTaGTCACACTGGTCTCCAACG | + |
Preference number: 5 (lower is better) Translates to: DPSSQYAEYAEPDDVQPGSMSSL*SHWSPT Trigger: CGTTGGAGACCAGTGTGACAACAATGAGGACATAGA...ACCTGGCTGGACGTCATCAGGCTCTGCATACTCTGCATACTGACTGCTAGGATC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | CCAAGATGGACTGATGTGTCTAAGAAGGGGTGTTTGCAGCACATTGCTGGAGCTTCATGGTCAGCCTGGTaGGAGTTGGAGATGTATGGG | + |
Preference number: 5 (lower is better) Translates to: PRWTDVSKKGCLQHIAGASWSAW*ELEMYG Trigger: CCCATACATCTCCAACTCCAACCAGGCTGACCATGA...AGCTCCAGCAATGTGCTGCAAACACCCCTTCTTAGACACATCAGTCCATCTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 90 bp | CATCCTCCAGGAAGTTGGTATGCTGATTGCCTTCTACCCAGTAGTTaGGGTCCAAAGTGTCCCCTGGGCCATTGGACACAATCTCAAACT | + |
Preference number: 5 (lower is better) Translates to: HPPGSWYADCLLPSS*GPKCPLGHWTQSQT Trigger: AGTTTGAGATTGTGTCCAATGGCCCAGGGGACACTTTGGACCTCAACTACTGGGTAGAAGGCAATCAGCATACCAACTTCCTGGAGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CCA 90 bp | TTGGGATCAATTTGTGTGGTCCCCTTGGGATCCAGAGGGACCATCTaGAAGTTTCTGAAGTCTGTCTCAGTGATGGCATTGTTCTCAGGG | + |
Preference number: 5 (lower is better) Translates to: LGSICVVPLGSRGTI*KFLKSVSVMALFSG Trigger: CCCTGAGAACAATGCCATCACTGAGACAGACTTCAGAAACTTCCAGATGGTCCCTCTGGATCCCAAGGGGACCACACAAATTGATCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGTCTCGAGATGCACCTTaGGCCACGTACATCCTGCTC | + |
Preference number: 5 (lower is better) Translates to: LTCAGLGNTVPQKSKKCRSRDAP*ATYILL Trigger: GAGCAGGATGTACGTGGCCAAAGGTGCATCTCGAGA...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | GGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCAGAGTATGAGCTCATTCATCATGTaGCTCAACTCCTCGCAGGAG | + |
Preference number: 5 (lower is better) Translates to: GTGKDAQTKILAVSMQSMSSFIM*LNSSQE Trigger: CTCCTGCGAGGAGTTGAGCAACATGATGAATGAGCT...CATACTCTGCATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTTGGGGCACTGGTGAGTaGCAGAGACGTATGCGGGTG | + |
Preference number: 5 (lower is better) Translates to: YSPFKGCSFFVSVESALTWGTGE*QRRMRV Trigger: CACCCGCATACGTCTCTGCAACTCACCAGTGCCCCA...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTCTGCCCTTGCAGTTCTaGCCACCCATCTGGGGCACT | + |
Preference number: 5 (lower is better) Translates to: YSPFKGCSFFVSVESALTLPLQF*PPIWGT Trigger: AGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCAG...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTTGGGGCTCAGGGCTGTaGCAAACACGTGAGCGCTCA | + |
Preference number: 5 (lower is better) Translates to: YSPFKGCSFFVSVESALTWGSGL*QTRERS Trigger: TGAGCGCTCACGTGTTTGCAACAGCCCTGAGCCCCA...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGGGGCAGTTGTCTTGGTaGTTCTGGTGGCCGTCATCA | + |
Preference number: 5 (lower is better) Translates to: LTCAGLGNTVPQKSKKCRGQLSW*FWWPSS Trigger: TGATGACGGCCACCAGAACAACCAAGACAACTGCCC...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 90 bp | AGCGGTCTCCAACCTCATCCTTGTCATAGTCTAATTGACGGGGATTaGAGAGAAGCTGGCAATTGTCCTTCTCATCGCTCACACCGTCAT | + |
Preference number: 5 (lower is better) Translates to: SGLQPHPCHSLIDGD*REAGNCPSHRSHRH Trigger: ATGACGGTGTGAGCGATGAGAAGGACAATTGCCAGCTTCTCTTCAATCCCCGTCAATTAGACTATGACAAGGATGAGGTTGGAGACCGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CCA 90 bp | ATGTTTCTTGTCTTCAGAGGGCCCCCAATGAGCTCCAAAAGGAACTaGTTATCACTAGACACTCTCTCCAGGTTCTTGCTCAGCTGGTTC | + |
Preference number: 5 (lower is better) Translates to: MFLVFRGPPMSSKRN*LSLDTLSRFLLSWF Trigger: GAACCAGCTGAGCAAGAACCTGGAGAGAGTGTCTAGTGATAACCAGTTCCTTTTGGAGCTCATTGGGGGCCCTCTGAAGACAAGAAACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | GATCCTAGCAGTCAGTATGCAGAGTATGCAGAGCCTGATGACGTCCAGCCAGGTTTTCTCCTTGCAAGCTaGACAATCCTGTTGAGATCA | + |
Preference number: 5 (lower is better) Translates to: DPSSQYAEYAEPDDVQPGFLLAS*TILLRS Trigger: TGATCTCAACAGGATTGTCAAGCTTGCAAGGAGAAA...ACCTGGCTGGACGTCATCAGGCTCTGCATACTCTGCATACTGACTGCTAGGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTTCACAGTGGGTACCATaGCCCAGAAAGCCCACTGGG | + |
Preference number: 5 (lower is better) Translates to: YSPFKGCSFFVSVESALTSQWVP*PRKPTG Trigger: CCCAGTGGGCTTTCTGGGCAATGGTACCCACTGTGA...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | GGGACAGGAAAGGATGCCCAGACAAAGATCCTAGCAGTCAGTATGCAGAGTATGATCTGGCACTCACACTaGTACATGGGGTCACTAAAG | + |
Preference number: 5 (lower is better) Translates to: GTGKDAQTKILAVSMQSMIWHSH*YMGSLK Trigger: CTTTAGTGACCCCATGTACAAGTGTGAGTGCCAGAT...CATACTCTGCATACTGACTGCTAGGATCTTTGTCTGGGCATCCTTTCCTGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTCCTCCTGCCCGGAATTaGGCAGTTTGGGGCAGTTGT | + |
Preference number: 5 (lower is better) Translates to: YSPFKGCSFFVSVESALTPPARN*AVWGSC Trigger: ACAACTGCCCCAAACTGCCAAATTCCGGGCAGGAGG...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 90 bp | ACAGCACTCGCCTTCCACAAAAGATGGGTTGGCACAAGTTGCAGGTaGGCAGGTGATCTGATGGCAGACTGTTTTAAATTTCTTGCAGGT | + |
Preference number: 5 (lower is better) Translates to: TALAFHKRWVGTSCR*AGDLMADCFKFLAG Trigger: ACCTGCAAGAAATTTAAAACAGTCTGCCATCAGATCACCTGCTCACCTGCAACTTGTGCCAACCCATCTTTTGTGGAAGGCGAGTGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | GCATCTGCCAACTTATTTGCCAGTCTGTTTCCTAGCAGCAGGGACAGGAAAGGAGTCTTCCGGTTAATGTaGCTGATGCTGAAAAGGTCA | + |
Preference number: 5 (lower is better) Translates to: ASANLFASLFPSSRDRKGVFRLM*LMLKRS Trigger: TGACCTTTTCAGCATCAGCAACATTAACCGGAAGAC...TCCTTTCCTGTCCCTGCTGCTAGGAAACAGACTGGCAAATAAGTTGGCAGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGGGGCAGCTTCTCTTGTaGCACATTTGGTGTTCTGTC | + |
Preference number: 5 (lower is better) Translates to: LTCAGLGNTVPQKSKKCRGQLLL*HIWCSV Trigger: GACAGAACACCAAATGTGCAACAAGAGAAGCTGCCC...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGAACACAAGCCGACAGTaGTCCCTGTCATCTGGAACA | + |
Preference number: 5 (lower is better) Translates to: LTCAGLGNTVPQKSKKCRNTSRQ*SLSSGT Trigger: TGTTCCAGATGACAGGGACAACTGTCGGCTTGTGTT...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | TTTTTAAACAAACAAGAAAAGGCAACACAGCGGAATGCTCGGTCTTCGCTCCACTCTTCCTGGTCTGGGTaGAACACAAGCCGACAGTTG | + |
Preference number: 5 (lower is better) Translates to: FLNKQEKATQRNARSSLHSSWSG*NTSRQL Trigger: CAACTGTCGGCTTGTGTTCAACCCAGACCAGGAAGA...GTGGAGCGAAGACCGAGCATTCCGCTGTGTTGCCTTTTCTTGTTTGTTTAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | CTGACCTGTGCTGGCCTTGGGAATACAGTTCCACAAAAATCTAAAAAGTGCAGGTCTCTTGTTGCACATTaGGTGTTCTGTCACATCCCC | + |
Preference number: 5 (lower is better) Translates to: LTCAGLGNTVPQKSKKCRSLVAH*VFCHIP Trigger: GGGGATGTGACAGAACACCAAATGTGCAACAAGAGA...CCTGCACTTTTTAGATTTTTGTGGAACTGTATTCCCAAGGCCAGCACAGGTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 90 bp | TCCACAAAAGATGGGTTGGCACAAGTTGCAGGTGAGCAGGTGATCTaGTGGCAGACTGTTTTAAATTTCTTGCAGGTGCATGTGGTACAA | + |
Preference number: 5 (lower is better) Translates to: STKDGLAQVAGEQVI*WQTVLNFLQVHVVQ Trigger: TTGTACCACATGCACCTGCAAGAAATTTAAAACAGTCTGCCATCAGATCACCTGCTCACCTGCAACTTGTGCCAACCCATCTTTTGTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | TTTTTAAACAAACAAGAAAAGGCAACACAGCGGAATGCTCGGTCTTCGCTCCACCTCTGGCTCACACACTaGTTTTTCTGTCCTAGCATC | + |
Preference number: 5 (lower is better) Translates to: FLNKQEKATQRNARSSLHLWLTH*FFCPSI Trigger: GATGCTAGGACAGAAAAACAAGTGTGTGAGCCAGAG...GTGGAGCGAAGACCGAGCATTCCGCTGTGTTGCCTTTTCTTGTTTGTTTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | TATTCCCCTTTCAAAGGATGCAGCTTCTTTGTCTCTGTCGAGTCAGCTTTAACTGTCTCAGTGATGGCATaGTTCTCAGGGCACACATCA | + |
Preference number: 5 (lower is better) Translates to: YSPFKGCSFFVSVESALTVSVMA*FSGHTS Trigger: TGATGTGTGCCCTGAGAACAATGCCATCACTGAGAC...AGTTAAAGCTGACTCGACAGAGACAAAGAAGCTGCATCCTTTGAAAGGGGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | TTTTTAAACAAACAAGAAAAGGCAACACAGCGGAATGCTCGGTCTTCGCTCCACTTCCAGCCAATGTTTTaGGGGTCATGCCATAGAGTC | + |
Preference number: 5 (lower is better) Translates to: FLNKQEKATQRNARSSLHFQPMF*GSCHRV Trigger: GACTCTATGGCATGACCCCAAAAACATTGGCTGGAA...GTGGAGCGAAGACCGAGCATTCCGCTGTGTTGCCTTTTCTTGTTTGTTTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | TTTTTAAACAAACAAGAAAAGGCAACACAGCGGAATGCTCGGTCTTCGCTCCACGAAATAGACCATCTCTaGGGAGAAGACAAACAGGCC | + |
Preference number: 5 (lower is better) Translates to: FLNKQEKATQRNARSSLHEIDHL*GEDKQA Trigger: GGCCTGTTTGTCTTCTCCCAAGAGATGGTCTATTTC...GTGGAGCGAAGACCGAGCATTCCGCTGTGTTGCCTTTTCTTGTTTGTTTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | ACGGTGAGCCTCATATCTCATCCAAATGTTTTCCAGCAGCAGGCTGGAAGCTCTACTGTTTTAAATTTCTaGCAGGTGCATGTGGTACAA | + |
Preference number: 5 (lower is better) Translates to: TVSLISHPNVFQQQAGSSTVLNF*QVHVVQ Trigger: TTGTACCACATGCACCTGCAAGAAATTTAAAACAGT...AGAGCTTCCAGCCTGCTGCTGGAAAACATTTGGATGAGATATGAGGCTCACCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | GATCAAAATCGTGGATTCTTTCTGTCTAACTTAGAAATGCAGTTGCCATTACTAGCATCCCCCTCGCCATaGTTGTCTGTGTCGATCTGT | + |
Preference number: 5 (lower is better) Translates to: DQNRGFFLSNLEMQLPLLASPSP*LSVSIC Trigger: ACAGATCGACACAGACAACAATGGCGAGGGGGATGC...TAGTAATGGCAACTGCATTTCTAAGTTAGACAGAAAGAATCCACGATTTTGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | GATAACAAGAAACAAGGAAACTCACCCTCAGAGATTTCAACACAAATAACTCCACCAGTTGGGATCAATTaGTGTGGTCCCCTTGGGATC | + |
Preference number: 5 (lower is better) Translates to: DNKKQGNSPSEISTQITPPVGIN*CGPLGI Trigger: GATCCCAAGGGGACCACACAAATTGATCCCAACTGG...TGGAGTTATTTGTGTTGAAATCTCTGAGGGTGAGTTTCCTTGTTTCTTGTTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | GATAACAAGAAACAAGGAAACTCACCCTCAGAGATTTCAACACAAATAACTCCAGAGATGTATGGGCAGTaGTCTTGGTTGTTCTGGTGG | + |
Preference number: 5 (lower is better) Translates to: DNKKQGNSPSEISTQITPEMYGQ*SWLFWW Trigger: CCACCAGAACAACCAAGACAACTGCCCATACATCTC...TGGAGTTATTTGTGTTGAAATCTCTGAGGGTGAGTTTCCTTGTTTCTTGTTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS-3UTR CAA 90 bp | GATAACAAGAAACAAGGAAACTCACCCTCAGAGATTTCAACACAAATAACTCCATCATCTATGTCCTCATaGTTGTCACACTGGTCTCCA | + |
Preference number: 5 (lower is better) Translates to: DNKKQGNSPSEISTQITPSSMSS*LSHWSP Trigger: TGGAGACCAGTGTGACAACAATGAGGACATAGATGA...TGGAGTTATTTGTGTTGAAATCTCTGAGGGTGAGTTTCCTTGTTTCTTGTTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 90 bp | CTGTGCAGGCTGACCAAGGGGACCAGGGGCTCCAGCGGCCATCAATaGGGCACGGATCACGCTGACAGGGTTTGGTTTCCCGGCCGCTGC | + |
Preference number: 6 (lower is better) Translates to: LCRLTKGTRGSSGHQ*GTDHADRVWFPGRC Trigger: GCAGCGGCCGGGAAACCAAACCCTGTCAGCGTGATCCGTGCCCAATTGATGGCCGCTGGAGCCCCTGGTCCCCTTGGTCAGCCTGCACAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CCA 72 bp | TCCCGGCCGCTGCCCTTGCAGTTCTTGCCACCCATCTaGGGCACTGGTGAGTTGCAGAGACGTATGCGGGTG | + |
Preference number: 6 (lower is better) Translates to: SRPLPLQFLPPI*GTGELQRRMRV Trigger: CACCCGCATACGTCTCTGCAACTCACCAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCAGCGGCCGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 90 bp | TGGGAGGTGCCGGGGCCTTCCAACACCAGGAGCGTTCCCCGAGACTaGCGGTCCTGCTTCAGTTGGGCTGTGAGGAAGAAGCCCTCCTTT | + |
Preference number: 6 (lower is better) Translates to: WEVPGPSNTRSVPRD*RSCFSWAVRKKPSF Trigger: AAAGGAGGGCTTCTTCCTCACAGCCCAACTGAAGCAGGACCGCAAGTCTCGGGGAACGCTCCTGGTGTTGGAAGGCCCCGGCACCTCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS GCA 72 bp | CACGCTGACAGGGTTTGGTTTCCCGGCCGCTGCCCTTaGAGTTCTTGCCACCCATCTGGGGCACTGGTGAGT | + |
Preference number: 6 (lower is better) Translates to: HADRVWFPGRCP*SSCHPSGALVS Trigger: ACTCACCAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCAGCGGCCGGGAAACCAAACCCTGTCAGCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS GCA 72 bp | ACGGATCACGCTGACAGGGTTTGGTTTCCCGGCCGCTaGCCTTGCAGTTCTTGCCACCCATCTGGGGCACTG | + |
Preference number: 6 (lower is better) Translates to: TDHADRVWFPGR*PCSSCHPSGAL Trigger: CAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCAGCGGCCGGGAAACCAAACCCTGTCAGCGTGATCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CCA 72 bp | CAGGCCAACACCGAAGGGTTGGTTCCCCTTGTAGCGTaGTGGACAAGGCAGGCAGTGGAAGCCCGGGTTGGT | + |
Preference number: 6 (lower is better) Translates to: QANTEGLVPLVA*WTRQAVEARVG Trigger: ACCAACCCGGGCTTCCACTGCCTGCCTTGTCCACCACGCTACAAGGGGAACCAACCCTTCGGTGTTGGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 72 bp | CCGGGGCCTTCCAACACCAGGAGCGTTCCCCGAGACTaGCGGTCCTGCTTCAGTTGGGCTGTGAGGAAGAAG | + |
Preference number: 6 (lower is better) Translates to: PGPSNTRSVPRD*RSCFSWAVRKK Trigger: CTTCTTCCTCACAGCCCAACTGAAGCAGGACCGCAAGTCTCGGGGAACGCTCCTGGTGTTGGAAGGCCCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 72 bp | CTGACCAAGGGGACCAGGGGCTCCAGCGGCCATCAATaGGGCACGGATCACGCTGACAGGGTTTGGTTTCCC | + |
Preference number: 6 (lower is better) Translates to: LTKGTRGSSGHQ*GTDHADRVWFP Trigger: GGGAAACCAAACCCTGTCAGCGTGATCCGTGCCCAATTGATGGCCGCTGGAGCCCCTGGTCCCCTTGGTCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS GCA 72 bp | AGGGTTTGGTTTCCCGGCCGCTGCCCTTGCAGTTCTTaGCACCCATCTGGGGCACTGGTGAGTTGCAGAGAC | + |
Preference number: 6 (lower is better) Translates to: RVWFPGRCPCSS*HPSGALVSCRD Trigger: GTCTCTGCAACTCACCAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCAGCGGCCGGGAAACCAAACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS GCA 72 bp | CAGCACACTCATCCAGGTCCTCACAGTGGGTACCATTaGCCAGAAAGCCCACTGGGCAGGAGCCACAGGACC | + |
Preference number: 6 (lower is better) Translates to: QHTHPGPHSGYH*PESPLGRSHRT Trigger: GGTCCTGTGGCTCCTGCCCAGTGGGCTTTCTGGGCAATGGTACCCACTGTGAGGACCTGGATGAGTGTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CCA 72 bp | GCCAACACCGAAGGGTTGGTTCCCCTTGTAGCGTGGTaGACAAGGCAGGCAGTGGAAGCCCGGGTTGGTGTT | + |
Preference number: 6 (lower is better) Translates to: ANTEGLVPLVAW*TRQAVEARVGV Trigger: AACACCAACCCGGGCTTCCACTGCCTGCCTTGTCCACCACGCTACAAGGGGAACCAACCCTTCGGTGTTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 72 bp | CAGGGTTTGGTTTCCCGGCCGCTGCCCTTGCAGTTCTaGCCACCCATCTGGGGCACTGGTGAGTTGCAGAGA | + |
Preference number: 6 (lower is better) Translates to: QGLVSRPLPLQF*PPIWGTGELQR Trigger: TCTCTGCAACTCACCAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCAGCGGCCGGGAAACCAAACCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS GCA 72 bp | AAAGTGTCCCCTGGGCCATTGGACACAATCTCAAACTaGCTCTGGGAGGTGCCGGGGCCTTCCAACACCAGG | + |
Preference number: 6 (lower is better) Translates to: KVSPGPLDTISN*LWEVPGPSNTR Trigger: CCTGGTGTTGGAAGGCCCCGGCACCTCCCAGAGGCAGTTTGAGATTGTGTCCAATGGCCCAGGGGACACTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS GCA 72 bp | GCTCAACTCCTCGCAGGAGTGCGTACACACCTCCTGTaGCTTCTCCACACCCTGGACCACGAGATCTGTGGT | + |
Preference number: 6 (lower is better) Translates to: AQLLAGVRTHLL*LLHTLDHEICG Trigger: ACCACAGATCTCGTGGTCCAGGGTGTGGAGAAGGCACAGGAGGTGTGTACGCACTCCTGCGAGGAGTTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CCA 72 bp | GTGTTGCTGGTGACATCACAAGACCGGCCTCTCTGCTaGGTCCCAGAGCCACAGGTGACAGAACACTCGGTC | + |
Preference number: 6 (lower is better) Translates to: VLLVTSQDRPLC*VPEPQVTEHSV Trigger: GACCGAGTGTTCTGTCACCTGTGGCTCTGGGACCCAGCAGAGAGGCCGGTCTTGTGATGTCACCAGCAACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CCA 72 bp | GTCACCTCGGCCGTCACCGTCCGAGTCTTCCTGGTCTaGGTTGAACACAAGCCGACAGTTGTCCCTGTCATC | + |
Preference number: 6 (lower is better) Translates to: VTSAVTVRVFLV*VEHKPTVVPVI Trigger: GATGACAGGGACAACTGTCGGCTTGTGTTCAACCCAGACCAGGAAGACTCGGACGGTGACGGCCGAGGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 72 bp | ACAGCACACTCATCCAGGTCCTCACAGTGGGTACCATaGCCCAGAAAGCCCACTGGGCAGGAGCCACAGGAC | + |
Preference number: 6 (lower is better) Translates to: TAHSSRSSQWVP*PRKPTGQEPQD Trigger: GTCCTGTGGCTCCTGCCCAGTGGGCTTTCTGGGCAATGGTACCCACTGTGAGGACCTGGATGAGTGTGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 72 bp | CCTCGGCCGTCACCGTCCGAGTCTTCCTGGTCTGGGTaGAACACAAGCCGACAGTTGTCCCTGTCATCTGGA | + |
Preference number: 6 (lower is better) Translates to: PRPSPSESSWSG*NTSRQLSLSSG Trigger: TCCAGATGACAGGGACAACTGTCGGCTTGTGTTCAACCCAGACCAGGAAGACTCGGACGGTGACGGCCGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 90 bp | CCGCTGCCCTTGCAGTTCTTGCCACCCATCTGGGGCACTGGTGAGTaGCAGAGACGTATGCGGGTGACATTGCCAACTCCACAAGTCACG | + |
Preference number: 6 (lower is better) Translates to: PLPLQFLPPIWGTGE*QRRMRVTLPTPQVT Trigger: CGTGACTTGTGGAGTTGGCAATGTCACCCGCATACGTCTCTGCAACTCACCAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGCAGCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 72 bp | GCCCTTGCAGTTCTTGCCACCCATCTGGGGCACTGGTaGGTTGCAGAGACGTATGCGGGTGACATTGCCAAC | + |
Preference number: 6 (lower is better) Translates to: ALAVLATHLGHW*VAETYAGDIAN Trigger: GTTGGCAATGTCACCCGCATACGTCTCTGCAACTCACCAGTGCCCCAGATGGGTGGCAAGAACTGCAAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 72 bp | CTCGGCCGTCACCGTCCGAGTCTTCCTGGTCTGGGTTaGACACAAGCCGACAGTTGTCCCTGTCATCTGGAA | + |
Preference number: 6 (lower is better) Translates to: LGRHRPSLPGLG*TQADSCPCHLE Trigger: TTCCAGATGACAGGGACAACTGTCGGCTTGTGTTCAACCCAGACCAGGAAGACTCGGACGGTGACGGCCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS GCA 72 bp | TCCAACACCAGGAGCGTTCCCCGAGACTTGCGGTCCTaGTTCAGTTGGGCTGTGAGGAAGAAGCCCTCCTTT | + |
Preference number: 6 (lower is better) Translates to: SNTRSVPRDLRS*FSWAVRKKPSF Trigger: AAAGGAGGGCTTCTTCCTCACAGCCCAACTGAAGCAGGACCGCAAGTCTCGGGGAACGCTCCTGGTGTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CCA 72 bp | TCTGTGACCACAGCACACTCATCCAGGTCCTCACAGTaGGTACCATTGCCCAGAAAGCCCACTGGGCAGGAG | + |
Preference number: 6 (lower is better) Translates to: SVTTAHSSRSSQ*VPLPRKPTGQE Trigger: CTCCTGCCCAGTGGGCTTTCTGGGCAATGGTACCCACTGTGAGGACCTGGATGAGTGTGCTGTGGTCACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CCA 72 bp | CAAATGTCACCTCGGCCGTCACCGTCCGAGTCTTCCTaGTCTGGGTTGAACACAAGCCGACAGTTGTCCCTG | + |
Preference number: 6 (lower is better) Translates to: QMSPRPSPSESS*SGLNTSRQLSL Trigger: CAGGGACAACTGTCGGCTTGTGTTCAACCCAGACCAGGAAGACTCGGACGGTGACGGCCGAGGTGACATTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 72 bp | TTCTGTCCTAGCATCCTCCAGGCCAACACCGAAGGGTaGGTTCCCCTTGTAGCGTGGTGGACAAGGCAGGCA | + |
Preference number: 6 (lower is better) Translates to: FCPSILQANTEG*VPLVAWWTRQA Trigger: TGCCTGCCTTGTCCACCACGCTACAAGGGGAACCAACCCTTCGGTGTTGGCCTGGAGGATGCTAGGACAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 90 bp | TTCCAACACCAGGAGCGTTCCCCGAGACTTGCGGTCCTGCTTCAGTaGGGCTGTGAGGAAGAAGCCCTCCTTTCTCCTTGCAAGCTTGAC | + |
Preference number: 6 (lower is better) Translates to: FQHQERSPRLAVLLQ*GCEEEALLSPCKLD Trigger: GTCAAGCTTGCAAGGAGAAAGGAGGGCTTCTTCCTCACAGCCCAACTGAAGCAGGACCGCAAGTCTCGGGGAACGCTCCTGGTGTTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 90 bp | CACTTGTTTTTCTGTCCTAGCATCCTCCAGGCCAACACCGAAGGGTaGGTTCCCCTTGTAGCGTGGTGGACAAGGCAGGCAGTGGAAGCC | + |
Preference number: 6 (lower is better) Translates to: HLFFCPSILQANTEG*VPLVAWWTRQAVEA Trigger: GGCTTCCACTGCCTGCCTTGTCCACCACGCTACAAGGGGAACCAACCCTTCGGTGTTGGCCTGGAGGATGCTAGGACAGAAAAACAAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 72 bp | GGTGCTCGCCAGTACCAGTCGTGGAGTTTACCACTTTaGGTGACACACCAGAGTAGCCGTAAGCCCGACTGG | + |
Preference number: 6 (lower is better) Translates to: GARQYQSWSLPL*VTHQSSRKPDW Trigger: CCAGTCGGGCTTACGGCTACTCTGGTGTGTCACTCAAAGTGGTAAACTCCACGACTGGTACTGGCGAGCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 72 bp | GGTGGACAAGGCAGGCAGTGGAAGCCCGGGTTGGTGTaGACACAGCGGGGAGCTTTGTTAGTTGAGAAGCAA | + |
Preference number: 6 (lower is better) Translates to: GGQGRQWKPGLV*TQRGALLVEKQ Trigger: TTGCTTCTCAACTAACAAAGCTCCCCGCTGTGTCAACACCAACCCGGGCTTCCACTGCCTGCCTTGTCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 90 bp | CAAATGTCACCTCGGCCGTCACCGTCCGAGTCTTCCTGGTCTGGGTaGAACACAAGCCGACAGTTGTCCCTGTCATCTGGAACACCATCA | + |
Preference number: 6 (lower is better) Translates to: QMSPRPSPSESSWSG*NTSRQLSLSSGTPS Trigger: TGATGGTGTTCCAGATGACAGGGACAACTGTCGGCTTGTGTTCAACCCAGACCAGGAAGACTCGGACGGTGACGGCCGAGGTGACATTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 72 bp | TCTGGGGCACTGGTGAGTTGCAGAGACGTATGCGGGTaGCATTGCCAACTCCACAAGTCACGGAGCATGAAG | + |
Preference number: 6 (lower is better) Translates to: SGALVSCRDVCG*HCQLHKSRSMK Trigger: CTTCATGCTCCGTGACTTGTGGAGTTGGCAATGTCACCCGCATACGTCTCTGCAACTCACCAGTGCCCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 72 bp | CTCGCCAGTACCAGTCGTGGAGTTTACCACTTTGAGTaGCACACCAGAGTAGCCGTAAGCCCGACTGGGCTT | + |
Preference number: 6 (lower is better) Translates to: LASTSRGVYHFE*HTRVAVSPTGL Trigger: AAGCCCAGTCGGGCTTACGGCTACTCTGGTGTGTCACTCAAAGTGGTAAACTCCACGACTGGTACTGGCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CCA 72 bp | CCAATGTTTTTGGGGTCATGCCATAGAGTCCGGACCTaGCCTTCTGTGTTTCCCGTGTGCCACAGGGCATTC | + |
Preference number: 6 (lower is better) Translates to: PMFLGSCHRVRT*PSVFPVCHRAF Trigger: GAATGCCCTGTGGCACACGGGAAACACAGAAGGCCAGGTCCGGACTCTATGGCATGACCCCAAAAACATTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 72 bp | TTGCAGTTCTTGCCACCCATCTGGGGCACTGGTGAGTaGCAGAGACGTATGCGGGTGACATTGCCAACTCCA | + |
Preference number: 6 (lower is better) Translates to: LQFLPPIWGTGE*QRRMRVTLPTP Trigger: TGGAGTTGGCAATGTCACCCGCATACGTCTCTGCAACTCACCAGTGCCCCAGATGGGTGGCAAGAACTGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 90 bp | AGCTGGTTCACCATGACGTGCAGTCCAGAGAGCTCATTCATCATGTaGCTCAACTCCTCGCAGGAGTGCGTACACACCTCCTGTGCCTTC | + |
Preference number: 6 (lower is better) Translates to: SWFTMTCSPESSFIM*LNSSQECVHTSCAF Trigger: GAAGGCACAGGAGGTGTGTACGCACTCCTGCGAGGAGTTGAGCAACATGATGAATGAGCTCTCTGGACTGCACGTCATGGTGAACCAGCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 72 bp | CTGCAAACACGAGATGGACATTCTGCAGCAAGCCCCTaGAGTGACTCTCTCGAGATGCACCTTTGGCCACGT | + |
Preference number: 6 (lower is better) Translates to: LQTRDGHSAASP*SDSLEMHLWPR Trigger: ACGTGGCCAAAGGTGCATCTCGAGAGAGTCACTTCAGGGGCTTGCTGCAGAATGTCCATCTCGTGTTTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 72 bp | GTGCCTTCTCCACACCCTGGACCACGAGATCTGTGGTaGTGTGAGGGCTCAGATGGAGAGTCTCTGTATGTT | + |
Preference number: 6 (lower is better) Translates to: VPSPHPGPRDLW*CEGSDGESLYV Trigger: AACATACAGAGACTCTCCATCTGAGCCCTCACATCACCACAGATCTCGTGGTCCAGGGTGTGGAGAAGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS GCA 72 bp | ATTCTGCAGCAAGCCCCTGAAGTGACTCTCTCGAGATaGACCTTTGGCCACGTACATCCTGCTCCTGTCTAC | + |
Preference number: 6 (lower is better) Translates to: ILQQAPEVTLSR*TFGHVHPAPVY Trigger: GTAGACAGGAGCAGGATGTACGTGGCCAAAGGTGCATCTCGAGAGAGTCACTTCAGGGGCTTGCTGCAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 72 bp | AACACGAGATGGACATTCTGCAGCAAGCCCCTGAAGTaGCTCTCTCGAGATGCACCTTTGGCCACGTACATC | + |
Preference number: 6 (lower is better) Translates to: NTRWTFCSKPLK*LSRDAPLATYI Trigger: GATGTACGTGGCCAAAGGTGCATCTCGAGAGAGTCACTTCAGGGGCTTGCTGCAGAATGTCCATCTCGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 90 bp | TTCCGGTTAATGTTGCTGATGCTGAAAAGGTCAAATGAAGTGTCCTaGACGTGGTCACCAGCAGAAGCTCTTGGCCCTATGCCCAGAGCC | + |
Preference number: 6 (lower is better) Translates to: FRLMLLMLKRSNEVS*TWSPAEALGPMPRA Trigger: GGCTCTGGGCATAGGGCCAAGAGCTTCTGCTGGTGACCACGTCAAGGACACTTCATTTGACCTTTTCAGCATCAGCAACATTAACCGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 90 bp | GCAGCTGTGAGTCTTGTCCTTACATGGATTCTCTGGCTCACACACTaGTTTTTCTGTCCTAGCATCCTCCAGGCCAACACCGAAGGGTTG | + |
Preference number: 6 (lower is better) Translates to: AAVSLVLTWILWLTH*FFCPSILQANTEGL Trigger: CAACCCTTCGGTGTTGGCCTGGAGGATGCTAGGACAGAAAAACAAGTGTGTGAGCCAGAGAATCCATGTAAGGACAAGACTCACAGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 90 bp | CACCAGCTCTTTGCCTTGGTGACGAATTACCCAGTTGGGATCAATTaGTGTGGTCCCCTTGGGATCCAGAGGGACCATCTGGAAGTTTCT | + |
Preference number: 6 (lower is better) Translates to: HQLFALVTNYPVGIN*CGPLGIQRDHLEVS Trigger: AGAAACTTCCAGATGGTCCCTCTGGATCCCAAGGGGACCACACAAATTGATCCCAACTGGGTAATTCGTCACCAAGGCAAAGAGCTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 72 bp | GGAAGTTGGTATGCTGATTGCCTTCTACCCAGTAGTTaGGGTCCAAAGTGTCCCCTGGGCCATTGGACACAA | + |
Preference number: 6 (lower is better) Translates to: GSWYADCLLPSS*GPKCPLGHWTQ Trigger: TTGTGTCCAATGGCCCAGGGGACACTTTGGACCTCAACTACTGGGTAGAAGGCAATCAGCATACCAACTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 72 bp | ACACTCTCTCCAGGTTCTTGCTCAGCTGGTTCACCATaGCGTGCAGTCCAGAGAGCTCATTCATCATGTTGC | + |
Preference number: 6 (lower is better) Translates to: TLSPGSCSAGSP*RAVQRAHSSCC Trigger: GCAACATGATGAATGAGCTCTCTGGACTGCACGTCATGGTGAACCAGCTGAGCAAGAACCTGGAGAGAGTGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 72 bp | ATTTTCTGCAAAGATTCGGCCCTCCTGCACACAGGCTaGCATGTTTCTTGTCTTCAGAGGGCCCCCAATGAG | + |
Preference number: 6 (lower is better) Translates to: IFCKDSALLHTG*HVSCLQRAPNE Trigger: CTCATTGGGGGCCCTCTGAAGACAAGAAACATGTCAGCCTGTGTGCAGGAGGGCCGAATCTTTGCAGAAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CCA 72 bp | GTCTTCAGAGGGCCCCCAATGAGCTCCAAAAGGAACTaGTTATCACTAGACACTCTCTCCAGGTTCTTGCTC | + |
Preference number: 6 (lower is better) Translates to: VFRGPPMSSKRN*LSLDTLSRFLL Trigger: GAGCAAGAACCTGGAGAGAGTGTCTAGTGATAACCAGTTCCTTTTGGAGCTCATTGGGGGCCCTCTGAAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 72 bp | TTTGCCTTGGTGACGAATTACCCAGTTGGGATCAATTaGTGTGGTCCCCTTGGGATCCAGAGGGACCATCTG | + |
Preference number: 6 (lower is better) Translates to: FALVTNYPVGIN*CGPLGIQRDHL Trigger: CAGATGGTCCCTCTGGATCCCAAGGGGACCACACAAATTGATCCCAACTGGGTAATTCGTCACCAAGGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 90 bp | AAACACGGGTTGGATAAGCACCCATCAATAGGGCAGCTTCTCTTGTaGCACATTTGGTGTTCTGTCACATCCCCGACACAGTCCTTCCCT | + |
Preference number: 6 (lower is better) Translates to: KHGLDKHPSIGQLLL*HIWCSVTSPTQSFP Trigger: AGGGAAGGACTGTGTCGGGGATGTGACAGAACACCAAATGTGCAACAAGAGAAGCTGCCCTATTGATGGGTGCTTATCCAACCCGTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 90 bp | GGAAAACACGGGTTGGATAAGCACCCATCAATAGGGCAGCTTCTCTaGTTGCACATTTGGTGTTCTGTCACATCCCCGACACAGTCCTTC | + |
Preference number: 6 (lower is better) Translates to: GKHGLDKHPSIGQLL*LHIWCSVTSPTQSF Trigger: GAAGGACTGTGTCGGGGATGTGACAGAACACCAAATGTGCAACAAGAGAAGCTGCCCTATTGATGGGTGCTTATCCAACCCGTGTTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 72 bp | CGGGTTGGTGTTGACACAGCGGGGAGCTTTGTTAGTTaGGAAGCAAATATCTGTGACCACAGCACACTCATC | + |
Preference number: 6 (lower is better) Translates to: RVGVDTAGSFVS*EANICDHSTLI Trigger: GATGAGTGTGCTGTGGTCACAGATATTTGCTTCTCAACTAACAAAGCTCCCCGCTGTGTCAACACCAACCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS GCA 72 bp | GACTCTCTCGAGATGCACCTTTGGCCACGTACATCCTaGTCCTGTCTACTTCTAGCTGCTCATAGAATGGTT | + |
Preference number: 6 (lower is better) Translates to: DSLEMHLWPRTS*SCLLLAAHRMV Trigger: AACCATTCTATGAGCAGCTAGAAGTAGACAGGAGCAGGATGTACGTGGCCAAAGGTGCATCTCGAGAGAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS GCA 72 bp | ACCCAGGTTTCATTTTCTGCAAAGATTCGGCCCTCCTaGACACAGGCTGACATGTTTCTTGTCTTCAGAGGG | + |
Preference number: 6 (lower is better) Translates to: TQVSFSAKIRPS*TQADMFLVFRG Trigger: CCCTCTGAAGACAAGAAACATGTCAGCCTGTGTGCAGGAGGGCCGAATCTTTGCAGAAAATGAAACCTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CCA 72 bp | TTATCACTAGACACTCTCTCCAGGTTCTTGCTCAGCTaGTTCACCATGACGTGCAGTCCAGAGAGCTCATTC | + |
Preference number: 6 (lower is better) Translates to: LSLDTLSRFLLS*FTMTCSPESSF Trigger: GAATGAGCTCTCTGGACTGCACGTCATGGTGAACCAGCTGAGCAAGAACCTGGAGAGAGTGTCTAGTGATAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CCA 72 bp | ATTTGTGTGGTCCCCTTGGGATCCAGAGGGACCATCTaGAAGTTTCTGAAGTCTGTCTCAGTGATGGCATTG | + |
Preference number: 6 (lower is better) Translates to: ICVVPLGSRGTI*KFLKSVSVMAL Trigger: CAATGCCATCACTGAGACAGACTTCAGAAACTTCCAGATGGTCCCTCTGGATCCCAAGGGGACCACACAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 72 bp | GGGTTGGATAAGCACCCATCAATAGGGCAGCTTCTCTaGTTGCACATTTGGTGTTCTGTCACATCCCCGACA | + |
Preference number: 6 (lower is better) Translates to: GLDKHPSIGQLL*LHIWCSVTSPT Trigger: TGTCGGGGATGTGACAGAACACCAAATGTGCAACAAGAGAAGCTGCCCTATTGATGGGTGCTTATCCAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 72 bp | TCTGAGTTTGCTGTCTGCACCAGCTCTTTGCCTTGGTaGCGAATTACCCAGTTGGGATCAATTTGTGTGGTC | + |
Preference number: 6 (lower is better) Translates to: SEFAVCTSSLPW*RITQLGSICVV Trigger: GACCACACAAATTGATCCCAACTGGGTAATTCGTCACCAAGGCAAAGAGCTGGTGCAGACAGCAAACTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 72 bp | ATGTTGCTGATGCTGAAAAGGTCAAATGAAGTGTCCTaGACGTGGTCACCAGCAGAAGCTCTTGGCCCTATG | + |
Preference number: 6 (lower is better) Translates to: MLLMLKRSNEVS*TWSPAEALGPM Trigger: CATAGGGCCAAGAGCTTCTGCTGGTGACCACGTCAAGGACACTTCATTTGACCTTTTCAGCATCAGCAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 72 bp | TTGGATAAGCACCCATCAATAGGGCAGCTTCTCTTGTaGCACATTTGGTGTTCTGTCACATCCCCGACACAG | + |
Preference number: 6 (lower is better) Translates to: LDKHPSIGQLLL*HIWCSVTSPTQ Trigger: CTGTGTCGGGGATGTGACAGAACACCAAATGTGCAACAAGAGAAGCTGCCCTATTGATGGGTGCTTATCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 72 bp | AGTCTTGTCCTTACATGGATTCTCTGGCTCACACACTaGTTTTTCTGTCCTAGCATCCTCCAGGCCAACACC | + |
Preference number: 6 (lower is better) Translates to: SLVLTWILWLTH*FFCPSILQANT Trigger: GGTGTTGGCCTGGAGGATGCTAGGACAGAAAAACAAGTGTGTGAGCCAGAGAATCCATGTAAGGACAAGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 72 bp | GATGGGTTGGCACAAGTTGCAGGTGAGCAGGTGATCTaGTGGCAGACTGTTTTAAATTTCTTGCAGGTGCAT | + |
Preference number: 6 (lower is better) Translates to: DGLAQVAGEQVI*WQTVLNFLQVH Trigger: ATGCACCTGCAAGAAATTTAAAACAGTCTGCCATCAGATCACCTGCTCACCTGCAACTTGTGCCAACCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CCA 72 bp | GAGTTGGAGATGTATGGGCAGTTGTCTTGGTTGTTCTaGTGGCCGTCATCATCTATGTCCTCATTGTTGTCA | + |
Preference number: 6 (lower is better) Translates to: ELEMYGQLSWLF*WPSSSMSSLLS Trigger: TGACAACAATGAGGACATAGATGATGACGGCCACCAGAACAACCAAGACAACTGCCCATACATCTCCAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 90 bp | GCATTGTTCTCAGGGCACACATCATCAATATCTGGGACATTATCATaGTCAAAGTCATCTTTACAAATGTCACCTCGGCCGTCACCGTCC | + |
Preference number: 6 (lower is better) Translates to: ALFSGHTSSISGTLS*SKSSLQMSPRPSPS Trigger: GGACGGTGACGGCCGAGGTGACATTTGTAAAGATGACTTTGACAATGATAATGTCCCAGATATTGATGATGTGTGCCCTGAGAACAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS TCA 72 bp | GCCTTCCACAAAAGATGGGTTGGCACAAGTTGCAGGTaGGCAGGTGATCTGATGGCAGACTGTTTTAAATTT | + |
Preference number: 6 (lower is better) Translates to: AFHKRWVGTSCR*AGDLMADCFKF Trigger: AAATTTAAAACAGTCTGCCATCAGATCACCTGCTCACCTGCAACTTGTGCCAACCCATCTTTTGTGGAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 90 bp | AGAGGGACCATCTGGAAGTTTCTGAAGTCTGTCTCAGTGATGGCATaGTTCTCAGGGCACACATCATCAATATCTGGGACATTATCATTG | + |
Preference number: 6 (lower is better) Translates to: RGTIWKFLKSVSVMA*FSGHTSSISGTLSL Trigger: CAATGATAATGTCCCAGATATTGATGATGTGTGCCCTGAGAACAATGCCATCACTGAGACAGACTTCAGAAACTTCCAGATGGTCCCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 72 bp | ATCTGGAAGTTTCTGAAGTCTGTCTCAGTGATGGCATaGTTCTCAGGGCACACATCATCAATATCTGGGACA | + |
Preference number: 6 (lower is better) Translates to: IWKFLKSVSVMA*FSGHTSSISGT Trigger: TGTCCCAGATATTGATGATGTGTGCCCTGAGAACAATGCCATCACTGAGACAGACTTCAGAAACTTCCAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |
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CDS CAA 72 bp | TCAGGGCACACATCATCAATATCTGGGACATTATCATaGTCAAAGTCATCTTTACAAATGTCACCTCGGCCG | + |
Preference number: 6 (lower is better) Translates to: SGHTSSISGTLS*SKSSLQMSPRP Trigger: CGGCCGAGGTGACATTTGTAAAGATGACTTTGACAATGATAATGTCCCAGATATTGATGATGTGTGCCCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170872.3 |