RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for THBD (Mus musculus)

Ensembl gene IDs: ENSMUSG00000074743

Ensembl transcript IDs: ENSMUST00000099270.5

Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATTTGCCACCTCCGCCCAGTTGTCCAGTATCTACTTGGAAGAAACTaGGCTGTCCTGCTTCAAGTCCTCCCTACCCTCGCTTGTCCTGAG +
Preference number: 1 (lower is better)
Translates to: ICHLRPVVQYLLGRN*AVLLQVLPTLACPE
Trigger: CTCAGGACAAGCGAGGGTAGGGAGGACTTGAAGCAGGACAGCCCAGTTTCTTCCAAGTAGATACTGGACAACTGGGCGGAGGTGGCAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR TCA 90 bp GCAGCACATTGCTTGTATTTCGGGACTACAAGGGGCAGGCACAGTTaGGAGTCAGCTCGGCACGAAGCACACAACTCATGCTTTACTGGA +
Preference number: 1 (lower is better)
Translates to: AAHCLYFGTTRGRHS*ESARHEAHNSCFTG
Trigger: TCCAGTAAAGCATGAGTTGTGTGCTTCGTGCCGAGCTGACTCTCAACTGTGCCTGCCCCTTGTAGTCCCGAAATACAAGCAATGTGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR TCA 90 bp ACACAACTCATGCTTTACTGGAAGGTGCTTCCATCTGTCAGGCTCTaGTATGTTGAGGCAGGACCACATACATCCTTGGAAAGCTATGAA +
Preference number: 1 (lower is better)
Translates to: TQLMLYWKVLPSVRL*YVEAGPHTSLESYE
Trigger: TTCATAGCTTTCCAAGGATGTATGTGGTCCTGCCTCAACATATCAGAGCCTGACAGATGGAAGCACCTTCCAGTAAAGCATGAGTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR TCA 90 bp ATGTTCTACAAAGGTTGGAAACTCTTAAGACCAGTTGTCCTGAAATaGCTGGACAATGTCCCTGTGGATGTTGTCAAAATGCAGATTCTT +
Preference number: 1 (lower is better)
Translates to: MFYKGWKLLRPVVLK*LDNVPVDVVKMQIL
Trigger: AAGAATCTGCATTTTGACAACATCCACAGGGACATTGTCCAGTCATTTCAGGACAACTGGTCTTAAGAGTTTCCAACCTTTGTAGAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR-3UTR GCA 90 bp CTCTGGGATCTCCGCTGTATTTGCCACCTCCGCCCAGTTGTCCAGTATCTACTTGAAACTGGGCTGTCCTaGTTCAAGTCCTCCCTACCC +
Preference number: 2 (lower is better)
Translates to: LWDLRCICHLRPVVQYLLETGLS*FKSSLP
Trigger: GGGTAGGGAGGACTTGAAGCAGGACAGCCCAGTTTC...AAGTAGATACTGGACAACTGGGCGGAGGTGGCAAATACAGCGGAGATCCCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR-3UTR CCA 90 bp TCCAGTATCTACTTGGAAGAAACTGGGCTGTCCTGCTTCAAGTCCTCCCTACCCACACAGCTGGGAGGCTaGAGAGAGAGAGAGGAGAGG +
Preference number: 2 (lower is better)
Translates to: SSIYLEETGLSCFKSSLPTQLGG*REREER
Trigger: CCTCTCCTCTCTCTCTCTCCAGCCTCCCAGCTGTGT...GGGTAGGGAGGACTTGAAGCAGGACAGCCCAGTTTCTTCCAAGTAGATACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR-3UTR TCA 90 bp ACCAGTTGTCCTGAAATGACTGGACAATGTCCCTGTGGATGTTGTCAAAATGCAAGGGGCAGGCACAGTTaGGAGTCAGCTCGGCACGAA +
Preference number: 2 (lower is better)
Translates to: TSCPEMTGQCPCGCCQNARGRHS*ESARHE
Trigger: TTCGTGCCGAGCTGACTCTCAACTGTGCCTGCCCCT...TGCATTTTGACAACATCCACAGGGACATTGTCCAGTCATTTCAGGACAACTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR-3UTR CCA 90 bp AGTTGTCCTGAAATGACTGGACAATGTCCCTGTGGATGTTGTCAAAATGCAGATTATGAACTGGCACACTaGGGTGGGGCAGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: SCPEMTGQCPCGCCQNADYELAH*GGAGVG
Trigger: CCCCACCCCTGCCCCACCCCAGTGTGCCAGTTCATA...ATCTGCATTTTGACAACATCCACAGGGACATTGTCCAGTCATTTCAGGACAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR CAA 90 bp TCATGCTTTACTGGAAGGTGCTTCCATCTGTCAGGCTCTGATATGTaGAGGCAGGACCACATACATCCTTGGAAAGCTATGAATGTGGCC +
Preference number: 2 (lower is better)
Translates to: SCFTGRCFHLSGSDM*RQDHIHPWKAMNVA
Trigger: GGCCACATTCATAGCTTTCCAAGGATGTATGTGGTCCTGCCTCAACATATCAGAGCCTGACAGATGGAAGCACCTTCCAGTAAAGCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR-3UTR CCA 90 bp AGTTGTCCTGAAATGACTGGACAATGTCCCTGTGGATGTTGTCAAAATGCAGATGTCATCTCCAGCCCATaGGGTCAAGGTTTGCCTTCA +
Preference number: 2 (lower is better)
Translates to: SCPEMTGQCPCGCCQNADVISSP*GQGLPS
Trigger: TGAAGGCAAACCTTGACCCCATGGGCTGGAGATGAC...ATCTGCATTTTGACAACATCCACAGGGACATTGTCCAGTCATTTCAGGACAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR-3UTR CCA 90 bp ACCAGTTGTCCTGAAATGACTGGACAATGTCCCTGTGGATGTTGTCAAAATGCACTACTTGGAAGAAACTaGGCTGTCCTGCTTCAAGTC +
Preference number: 2 (lower is better)
Translates to: TSCPEMTGQCPCGCCQNALLGRN*AVLLQV
Trigger: GACTTGAAGCAGGACAGCCCAGTTTCTTCCAAGTAG...TGCATTTTGACAACATCCACAGGGACATTGTCCAGTCATTTCAGGACAACTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR-3UTR CCA 90 bp ACCAGTTGTCCTGAAATGACTGGACAATGTCCCTGTGGATGTTGTCAAAATGCAGTCATGTCAAAGGGTTaGACAAAGGATCCTCTGCAC +
Preference number: 2 (lower is better)
Translates to: TSCPEMTGQCPCGCCQNAVMSKG*TKDPLH
Trigger: GTGCAGAGGATCCTTTGTCCAACCCTTTGACATGAC...TGCATTTTGACAACATCCACAGGGACATTGTCCAGTCATTTCAGGACAACTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR-3UTR GCA 90 bp AGTTGTCCTGAAATGACTGGACAATGTCCCTGTGGATGTTGTCAAAATGCAGATTGGGGGCTAGGATTTTaGAATTCTAGCCAGATCCCA +
Preference number: 2 (lower is better)
Translates to: SCPEMTGQCPCGCCQNADWGLGF*NSSQIP
Trigger: TGGGATCTGGCTAGAATTGCAAAATCCTAGCCCCCA...ATCTGCATTTTGACAACATCCACAGGGACATTGTCCAGTCATTTCAGGACAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR-3UTR CCA 90 bp AGTTGTCCTGAAATGACTGGACAATGTCCCTGTGGATGTTGTCAAAATGCAGATTGTCCAGTATCTACTTaGAAGAAACTGGGCTGTCCT +
Preference number: 2 (lower is better)
Translates to: SCPEMTGQCPCGCCQNADCPVST*KKLGCP
Trigger: AGGACAGCCCAGTTTCTTCCAAGTAGATACTGGACA...ATCTGCATTTTGACAACATCCACAGGGACATTGTCCAGTCATTTCAGGACAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR-3UTR CCA 90 bp AAGATCCCTCTGAATTACGAGATATTGTTCAAGAGTCTCATTAAAAGAAAGCCCCAACTCATGCTTTACTaGAAGGTGCTTCCATCTGTC +
Preference number: 2 (lower is better)
Translates to: KIPLNYEILFKSLIKRKPQLMLY*KVLPSV
Trigger: GACAGATGGAAGCACCTTCCAGTAAAGCATGAGTTG...GGGCTTTCTTTTAATGAGACTCTTGAACAATATCTCGTAATTCAGAGGGATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR CAA 90 bp CCAGTATGTCTCAAGATAGCAATGTCCTATTGTCATGTCAAAGGGTaGGACAAAGGATCCTCTGCACATTTTGAACACTGTCAAAAATTA +
Preference number: 2 (lower is better)
Translates to: PVCLKIAMSYCHVKG*DKGSSAHFEHCQKL
Trigger: TAATTTTTGACAGTGTTCAAAATGTGCAGAGGATCCTTTGTCCAACCCTTTGACATGACAATAGGACATTGCTATCTTGAGACATACTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR CAA 90 bp GGCCTGCTACTTATTATTAACCGACATTTAAATGTTCTACAAAGGTaGGAAACTCTTAAGACCAGTTGTCCTGAAATGACTGGACAATGT +
Preference number: 2 (lower is better)
Translates to: GLLLIINRHLNVLQR*ETLKTSCPEMTGQC
Trigger: ACATTGTCCAGTCATTTCAGGACAACTGGTCTTAAGAGTTTCCAACCTTTGTAGAACATTTAAATGTCGGTTAATAATAAGTAGCAGGCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR-3UTR TCA 90 bp ATCCCTCTGAATTACGAGATATTGTTCAAGAGTCTCATTAAAAGAAAGCCCCATAATACCCAAAGCCAGTaGAAAAGAACGTTTTCTGCT +
Preference number: 2 (lower is better)
Translates to: IPLNYEILFKSLIKRKPHNTQSQ*KRTFSA
Trigger: AGCAGAAAACGTTCTTTTTCACTGGCTTTGGGTATT...ATGGGGCTTTCTTTTAATGAGACTCTTGAACAATATCTCGTAATTCAGAGGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR CAA 90 bp TTGTATCCAGAAAGCAAAGCTATGCAGAGAAAATTCCTCAGTTTCTaGATAATAAATGGCCTTAACATGGCCTGCTACTTATTATTAACC +
Preference number: 2 (lower is better)
Translates to: LYPESKAMQRKFLSF*IINGLNMACYLLLT
Trigger: GGTTAATAATAAGTAGCAGGCCATGTTAAGGCCATTTATTATCAAGAAACTGAGGAATTTTCTCTGCATAGCTTTGCTTTCTGGATACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR TCA 72 bp TTGCCTTCAAGCCTACAGATCAGCAGCACTAGGAGGTaGGGTGAGGGACTGGGGTACTCTGGGATCTCCGCT +
Preference number: 3 (lower is better)
Translates to: LPSSLQISSTRR*GEGLGYSGISA
Trigger: AGCGGAGATCCCAGAGTACCCCAGTCCCTCACCTCACCTCCTAGTGCTGCTGATCTGTAGGCTTGAAGGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR CCA 72 bp CTCCGCCCAGTTGTCCAGTATCTACTTGGAAGAAACTaGGCTGTCCTGCTTCAAGTCCTCCCTACCCTCGCT +
Preference number: 3 (lower is better)
Translates to: LRPVVQYLLGRN*AVLLQVLPTLA
Trigger: AGCGAGGGTAGGGAGGACTTGAAGCAGGACAGCCCAGTTTCTTCCAAGTAGATACTGGACAACTGGGCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR CCA 72 bp TACAGATCAGCAGCACTAGGAGGTGAGGTGAGGGACTaGGGTACTCTGGGATCTCCGCTGTATTTGCCACCT +
Preference number: 3 (lower is better)
Translates to: YRSAALGGEVRD*GTLGSPLYLPP
Trigger: AGGTGGCAAATACAGCGGAGATCCCAGAGTACCCCAGTCCCTCACCTCACCTCCTAGTGCTGCTGATCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR TCA 72 bp TGCTTGTATTTCGGGACTACAAGGGGCAGGCACAGTTaGGAGTCAGCTCGGCACGAAGCACACAACTCATGC +
Preference number: 3 (lower is better)
Translates to: CLYFGTTRGRHS*ESARHEAHNSC
Trigger: GCATGAGTTGTGTGCTTCGTGCCGAGCTGACTCTCAACTGTGCCTGCCCCTTGTAGTCCCGAAATACAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR TCA 72 bp TGTCCTGCTTCAAGTCCTCCCTACCCTCGCTTGTCCTaGGAGGATGGGCTCTTCTCTGGTTATTATACCAGC +
Preference number: 3 (lower is better)
Translates to: CPASSPPYPRLS*EDGLFSGYYTS
Trigger: GCTGGTATAATAACCAGAGAAGAGCCCATCCTCTCAGGACAAGCGAGGGTAGGGAGGACTTGAAGCAGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR CCA 72 bp TATTTGCCACCTCCGCCCAGTTGTCCAGTATCTACTTaGAAGAAACTGGGCTGTCCTGCTTCAAGTCCTCCC +
Preference number: 3 (lower is better)
Translates to: YLPPPPSCPVST*KKLGCPASSPP
Trigger: GGGAGGACTTGAAGCAGGACAGCCCAGTTTCTTCCAAGTAGATACTGGACAACTGGGCGGAGGTGGCAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR-3UTR CAA 90 bp CACACAACTCATGCTTTACTGGAAGGTGCTTCCATCTGTCAGGCTCTGATATGTGGATCTCCGCTGTATTaGCCACCTCCGCCCAGTTGT +
Preference number: 3 (lower is better)
Translates to: HTTHALLEGASICQALICGSPLY*PPPPSC
Trigger: ACAACTGGGCGGAGGTGGCAAATACAGCGGAGATCC...ACATATCAGAGCCTGACAGATGGAAGCACCTTCCAGTAAAGCATGAGTTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR GCA 72 bp TTGTCCAGTATCTACTTGGAAGAAACTGGGCTGTCCTaGTTCAAGTCCTCCCTACCCTCGCTTGTCCTGAGA +
Preference number: 3 (lower is better)
Translates to: LSSIYLEETGLS*FKSSLPSLVLR
Trigger: TCTCAGGACAAGCGAGGGTAGGGAGGACTTGAAGCAGGACAGCCCAGTTTCTTCCAAGTAGATACTGGACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR GCA 72 bp CATTCCCAAGTTTCCATGTTTCCCTCAGCAGCACATTaGTTGTATTTCGGGACTACAAGGGGCAGGCACAGT +
Preference number: 3 (lower is better)
Translates to: HSQVSMFPSAAH*LYFGTTRGRHS
Trigger: ACTGTGCCTGCCCCTTGTAGTCCCGAAATACAAGCAATGTGCTGCTGAGGGAAACATGGAAACTTGGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR TCA 72 bp ATGCTTTACTGGAAGGTGCTTCCATCTGTCAGGCTCTaGTATGTTGAGGCAGGACCACATACATCCTTGGAA +
Preference number: 3 (lower is better)
Translates to: MLYWKVLPSVRL*YVEAGPHTSLE
Trigger: TTCCAAGGATGTATGTGGTCCTGCCTCAACATATCAGAGCCTGACAGATGGAAGCACCTTCCAGTAAAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR TCA 72 bp GTGTACAGGCCAGTGGCCAGGGCTAGAAGATCCCTCTaGATTACGAGATATTGTTCAAGAGTCTCATTAAAA +
Preference number: 3 (lower is better)
Translates to: VYRPVARARRSL*ITRYCSRVSLK
Trigger: TTTTAATGAGACTCTTGAACAATATCTCGTAATTCAGAGGGATCTTCTAGCCCTGGCCACTGGCCTGTACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR-3UTR CAA 90 bp ACCAGTTGTCCTGAAATGACTGGACAATGTCCCTGTGGATGTTGTCAAAATGCAGATAGCAATGTCCTATaGTCATGTCAAAGGGTTGGA +
Preference number: 3 (lower is better)
Translates to: TSCPEMTGQCPCGCCQNADSNVL*SCQRVG
Trigger: TCCAACCCTTTGACATGACAATAGGACATTGCTATC...TGCATTTTGACAACATCCACAGGGACATTGTCCAGTCATTTCAGGACAACTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR TCA 72 bp AAAGGTTGGAAACTCTTAAGACCAGTTGTCCTGAAATaGCTGGACAATGTCCCTGTGGATGTTGTCAAAATG +
Preference number: 3 (lower is better)
Translates to: KGWKLLRPVVLK*LDNVPVDVVKM
Trigger: CATTTTGACAACATCCACAGGGACATTGTCCAGTCATTTCAGGACAACTGGTCTTAAGAGTTTCCAACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR CCA 90 bp TCCAGTATCTACTTGGAAGAAACTGGGCTGTCCTGCTTCAAGTCCTCCCTACCCTCGCCAGTAACCCACTaGAAGCCGCGCAGGGGCCCG +
Preference number: 4 (lower is better)
Translates to: SSIYLEETGLSCFKSSLPSPVTH*KPRRGP
Trigger: CGGGCCCCTGCGCGGCTTCCAGTGGGTTACTGGCGA...GGGTAGGGAGGACTTGAAGCAGGACAGCCCAGTTTCTTCCAAGTAGATACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR CCA 90 bp CCCTGTGGATGTTGTCAAAATGCAGATTCTTATGAACTGGCACACTGGGGTGGGTGGCGTAGGGCTGACTaGAGGCTCCCCAGAGCCCTC +
Preference number: 4 (lower is better)
Translates to: PCGCCQNADSYELAHWGGWRRAD*RLPRAL
Trigger: GAGGGCTCTGGGGAGCCTCCAGTCAGCCCTACGCCA...CCCACCCCAGTGTGCCAGTTCATAAGAATCTGCATTTTGACAACATCCACAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR GCA 90 bp CTCTGGGATCTCCGCTGTATTTGCCACCTCCGCCCAGTTGTCCAGTATCTACTTGTCATCAAATGTCCTTaGAGGCGCTGGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LWDLRCICHLRPVVQYLLVIKCP*RRWQAW
Trigger: CCAGGCCTGCCAGCGCCTGCAAGGACATTTGATGAC...AAGTAGATACTGGACAACTGGGCGGAGGTGGCAAATACAGCGGAGATCCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR GCA 90 bp TCCAGTATCTACTTGGAAGAAACTGGGCTGTCCTGCTTCAAGTCCTCCCTACCCGGGTCGTCACAGCCCTaGGGGAGCTGTAAACCGATC +
Preference number: 4 (lower is better)
Translates to: SSIYLEETGLSCFKSSLPGSSQP*GSCKPI
Trigger: GATCGGTTTACAGCTCCCGCAGGGCTGTGACGACCC...GGGTAGGGAGGACTTGAAGCAGGACAGCCCAGTTTCTTCCAAGTAGATACTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR CCA 90 bp TCCAGTATCTACTTGGAAGAAACTGGGCTGTCCTGCTTCAAGTCCTCCCTACCCAAGGTCGCGGGGCCCTaGAAAAGCGCGAAGCACTCA +
Preference number: 4 (lower is better)
Translates to: SSIYLEETGLSCFKSSLPKVAGP*KSAKHS
Trigger: TGAGTGCTTCGCGCTTTTCCAGGGCCCCGCGACCTT...GGGTAGGGAGGACTTGAAGCAGGACAGCCCAGTTTCTTCCAAGTAGATACTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR TCA 90 bp CCCTGTGGATGTTGTCAAAATGCAGATTCTTATGAACTGGCACACTGGGGTGGGGCGTCCGATCAGTCCTaGCGTGCTGCAGCACTACCT +
Preference number: 4 (lower is better)
Translates to: PCGCCQNADSYELAHWGGASDQS*RAAALP
Trigger: AGGTAGTGCTGCAGCACGTCAGGACTGATCGGACGC...CCCACCCCAGTGTGCCAGTTCATAAGAATCTGCATTTTGACAACATCCACAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR GCA 90 bp TCCAGTATCTACTTGGAAGAAACTGGGCTGTCCTGCTTCAAGTCCTCCCTACCCATGAGCACGCCAGAGTaGACTGGCCTTGCAGAAGGG +
Preference number: 4 (lower is better)
Translates to: SSIYLEETGLSCFKSSLPMSTPE*TGLAEG
Trigger: CCCTTCTGCAAGGCCAGTGCACTCTGGCGTGCTCAT...GGGTAGGGAGGACTTGAAGCAGGACAGCCCAGTTTCTTCCAAGTAGATACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR CCA 90 bp ACCAGTTGTCCTGAAATGACTGGACAATGTCCCTGTGGATGTTGTCAAAATGCAGCTGGCAGGCCTGGCTaGCATCGAGGAAGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: TSCPEMTGQCPCGCCQNAAGRPG*HRGRSR
Trigger: CCGCGACCTTCCTCGATGCCAGCCAGGCCTGCCAGC...TGCATTTTGACAACATCCACAGGGACATTGTCCAGTCATTTCAGGACAACTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR CCA 90 bp CCCTGTGGATGTTGTCAAAATGCAGATTCTTATGAACTGGCACACTGGGGTGGGGCAGGTCCATGTCTCTaGGGCAGAGGCATCTGGGTT +
Preference number: 4 (lower is better)
Translates to: PCGCCQNADSYELAHWGGAGPCL*GRGIWV
Trigger: AACCCAGATGCCTCTGCCCCAGAGACATGGACCTGC...CCCACCCCAGTGTGCCAGTTCATAAGAATCTGCATTTTGACAACATCCACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR CCA 90 bp TCCAGTATCTACTTGGAAGAAACTGGGCTGTCCTGCTTCAAGTCCTCCCTACCCACAGAGCTGGGGACATaGATTGGGCCCCTGCTTACA +
Preference number: 4 (lower is better)
Translates to: SSIYLEETGLSCFKSSLPTELGT*IGPLLT
Trigger: TGTAAGCAGGGGCCCAATCCATGTCCCCAGCTCTGT...GGGTAGGGAGGACTTGAAGCAGGACAGCCCAGTTTCTTCCAAGTAGATACTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR CCA 90 bp CACACAACTCATGCTTTACTGGAAGGTGCTTCCATCTGTCAGGCTCTGATATGTCACGCCAGAGTGCACTaGCCTTGCAGAAGGGGGACC +
Preference number: 4 (lower is better)
Translates to: HTTHALLEGASICQALICHARVH*PCRRGT
Trigger: GGTCCCCCTTCTGCAAGGCCAGTGCACTCTGGCGTG...ACATATCAGAGCCTGACAGATGGAAGCACCTTCCAGTAAAGCATGAGTTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR CCA 90 bp CACACAACTCATGCTTTACTGGAAGGTGCTTCCATCTGTCAGGCTCTGATATGTGTCGGTGGGGCTCACTaGCTGGCACTGAAACTCGCA +
Preference number: 4 (lower is better)
Translates to: HTTHALLEGASICQALICVGGAH*LALKLA
Trigger: TGCGAGTTTCAGTGCCAGCCAGTGAGCCCCACCGAC...ACATATCAGAGCCTGACAGATGGAAGCACCTTCCAGTAAAGCATGAGTTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR GCA 90 bp CACAACTCATGCTTTACTGGAAGGTGCTTCCATCTGTCAGGCTCTGATATGTTGACACCGGTGTCCGTCTaGAGCCAACTGGTAGCCTGT +
Preference number: 4 (lower is better)
Translates to: HNSCFTGRCFHLSGSDMLTPVSV*SQLVAC
Trigger: ACAGGCTACCAGTTGGCTGCAGACGGACACCGGTGT...CAACATATCAGAGCCTGACAGATGGAAGCACCTTCCAGTAAAGCATGAGTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR GCA 90 bp CACACAACTCATGCTTTACTGGAAGGTGCTTCCATCTGTCAGGCTCTGATATGTTTCATCCGGCTTGGGTaGGAAGCCTGGAGCGCAGAT +
Preference number: 4 (lower is better)
Translates to: HTTHALLEGASICQALICFIRLG*EAWSAD
Trigger: ATCTGCGCTCCAGGCTTCGCACCCAAGCCGGATGAA...ACATATCAGAGCCTGACAGATGGAAGCACCTTCCAGTAAAGCATGAGTTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR GCA 90 bp CACAACTCATGCTTTACTGGAAGGTGCTTCCATCTGTCAGGCTCTGATATGTTGTCAGTCCTGACGTGCTaGAGCACTACCTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: HNSCFTGRCFHLSGSDMLSVLTC*STTSLA
Trigger: CGCCAAGGAGGTAGTGCTGCAGCACGTCAGGACTGA...CAACATATCAGAGCCTGACAGATGGAAGCACCTTCCAGTAAAGCATGAGTTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR TCA 90 bp CACAACTCATGCTTTACTGGAAGGTGCTTCCATCTGTCAGGCTCTGATATGTTGAACCCTCGTCCAGGATaGAGCCTTCAGGGCATTCAC +
Preference number: 4 (lower is better)
Translates to: HNSCFTGRCFHLSGSDMLNPRPG*SLQGIH
Trigger: GTGAATGCCCTGAAGGCTTCATCCTGGACGAGGGTT...CAACATATCAGAGCCTGACAGATGGAAGCACCTTCCAGTAAAGCATGAGTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR TCA 90 bp GGCTCTTCTCTGGTTATTATACCAGCCAGGGTGCTTTTAAGTTGCCAGAGAACATGCTTCTTGCGCAGGTaGCAGAGAAGCGCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: GSSLVIIPARVLLSCQRTCFLRR*QRSAKS
Trigger: GCTTTTGGCGCTTCTCTGTCACCTGCGCAAGAAGCA...TGTTCTCTGGCAACTTAAAAGCACCCTGGCTGGTATAATAACCAGAGAAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR GCA 90 bp GGCTCTTCTCTGGTTATTATACCAGCCAGGGTGCTTTTAAGTTGCCAGAGAACACTCCTTGGCGGAAGATaGGCACTTGTACTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GSSLVIIPARVLLSCQRTLLGGR*ALVLQL
Trigger: GAGCTGGAGTACAAGTGCGCATCTTCCGCCAAGGAG...TGTTCTCTGGCAACTTAAAAGCACCCTGGCTGGTATAATAACCAGAGAAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR CCA 90 bp AGTTGTCCTGAAATGACTGGACAATGTCCCTGTGGATGTTGTCAAAATGCAGATGAGCCCCAGGCTAGCTaGAGCCAGCACACCCAGAAA +
Preference number: 4 (lower is better)
Translates to: SCPEMTGQCPCGCCQNADEPQAS*SQHTQK
Trigger: TTTCTGGGTGTGCTGGCTCCAGCTAGCCTGGGGCTC...ATCTGCATTTTGACAACATCCACAGGGACATTGTCCAGTCATTTCAGGACAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR CCA 90 bp ACCAGTTGTCCTGAAATGACTGGACAATGTCCCTGTGGATGTTGTCAAAATGCACGCATTGACTGCCTGTaGGCTGCAGCTTGGCTAGTG +
Preference number: 4 (lower is better)
Translates to: TSCPEMTGQCPCGCCQNARIDCL*AAAWLV
Trigger: CACTAGCCAAGCTGCAGCCCACAGGCAGTCAATGCG...TGCATTTTGACAACATCCACAGGGACATTGTCCAGTCATTTCAGGACAACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR CCA 90 bp GGCTCTTCTCTGGTTATTATACCAGCCAGGGTGCTTTTAAGTTGCCAGAGAACAGTGTTAACACAGAGCTaGGGACATGGATTGGGCCCC +
Preference number: 4 (lower is better)
Translates to: GSSLVIIPARVLLSCQRTVLTQS*GHGLGP
Trigger: GGGGCCCAATCCATGTCCCCAGCTCTGTGTTAACAC...TGTTCTCTGGCAACTTAAAAGCACCCTGGCTGGTATAATAACCAGAGAAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR GCA 90 bp TTCCTAGCTTACTTAAAACAAAACCCTTCTGGACTCTGTGTGGCACTATCTAGAGCTCCACGCATTGACTaGCTGTGGGCTGCAGCTTGG +
Preference number: 4 (lower is better)
Translates to: FLAYLKQNPSGLCVALSRAPRID*LWAAAW
Trigger: CCAAGCTGCAGCCCACAGGCAGTCAATGCGTGGAGC...TCTAGATAGTGCCACACAGAGTCCAGAAGGGTTTTGTTTTAAGTAAGCTAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR GCA 90 bp TTCCTAGCTTACTTAAAACAAAACCCTTCTGGACTCTGTGTGGCACTATCTAGACAGCGCCCTGCTTCTTaGGCAGGTGACAGAGAAGCG +
Preference number: 4 (lower is better)
Translates to: FLAYLKQNPSGLCVALSRQRPAS*AGDREA
Trigger: CGCTTCTCTGTCACCTGCGCAAGAAGCAGGGCGCTG...TCTAGATAGTGCCACACAGAGTCCAGAAGGGTTTTGTTTTAAGTAAGCTAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR CCA 90 bp AAGATCCCTCTGAATTACGAGATATTGTTCAAGAGTCTCATTAAAAGAAAGCCCAGGCGCTGGCAGGCCTaGCTGGCATCGAGGAAGGTC +
Preference number: 4 (lower is better)
Translates to: KIPLNYEILFKSLIKRKPRRWQA*LASRKV
Trigger: GACCTTCCTCGATGCCAGCCAGGCCTGCCAGCGCCT...GGGCTTTCTTTTAATGAGACTCTTGAACAATATCTCGTAATTCAGAGGGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR CCA 90 bp AAGATCCCTCTGAATTACGAGATATTGTTCAAGAGTCTCATTAAAAGAAAGCCCTGTCCTTGCAGGCGCTaGCAGGCCTGGCTGGCATCG +
Preference number: 4 (lower is better)
Translates to: KIPLNYEILFKSLIKRKPCPCRR*QAWLAS
Trigger: CGATGCCAGCCAGGCCTGCCAGCGCCTGCAAGGACA...GGGCTTTCTTTTAATGAGACTCTTGAACAATATCTCGTAATTCAGAGGGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR CAA 72 bp ACTGGAAGGTGCTTCCATCTGTCAGGCTCTGATATGTaGAGGCAGGACCACATACATCCTTGGAAAGCTATG +
Preference number: 4 (lower is better)
Translates to: TGRCFHLSGSDM*RQDHIHPWKAM
Trigger: CATAGCTTTCCAAGGATGTATGTGGTCCTGCCTCAACATATCAGAGCCTGACAGATGGAAGCACCTTCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR TCA 90 bp TTCCTAGCTTACTTAAAACAAAACCCTTCTGGACTCTGTGTGGCACTATCTAGAGACATCGGCAGCCACTaGGGAGCGCACTGTCATCAA +
Preference number: 4 (lower is better)
Translates to: FLAYLKQNPSGLCVALSRDIGSH*GAHCHQ
Trigger: TTGATGACAGTGCGCTCCTCAGTGGCTGCCGATGTC...TCTAGATAGTGCCACACAGAGTCCAGAAGGGTTTTGTTTTAAGTAAGCTAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR TCA 90 bp AGTTGTCCTGAAATGACTGGACAATGTCCCTGTGGATGTTGTCAAAATGCAGATCAATGGAGATGCCAATaGGCACGCCAGAGTGCACTG +
Preference number: 4 (lower is better)
Translates to: SCPEMTGQCPCGCCQNADQWRCQ*ARQSAL
Trigger: CAGTGCACTCTGGCGTGCTCATTGGCATCTCCATTG...ATCTGCATTTTGACAACATCCACAGGGACATTGTCCAGTCATTTCAGGACAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR GCA 90 bp ATCCCTCTGAATTACGAGATATTGTTCAAGAGTCTCATTAAAAGAAAGCCCCATCCACCGCGGCGGAACTaGCTACCGGCAGCGTTTGAA +
Preference number: 4 (lower is better)
Translates to: IPLNYEILFKSLIKRKPHPPRRN*LPAAFE
Trigger: TTCAAACGCTGCCGGTAGGCAGTTCCGCCGCGGTGG...ATGGGGCTTTCTTTTAATGAGACTCTTGAACAATATCTCGTAATTCAGAGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR GCA 90 bp CACAACTCATGCTTTACTGGAAGGTGCTTCCATCTGTCAGGCTCTGATATGTTGCATTCGTGCTCCTATTaGACAAGTACTCACAGCCAC +
Preference number: 4 (lower is better)
Translates to: HNSCFTGRCFHLSGSDMLHSCSY*TSTHSH
Trigger: GTGGCTGTGAGTACTTGTGCAATAGGAGCACGAATG...CAACATATCAGAGCCTGACAGATGGAAGCACCTTCCAGTAAAGCATGAGTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR GCA 90 bp AGTTGTCCAGTATCTACTTGGAAGAAACTGGGCTGTCCTGCTTCAAGTCCTCCCATCTGGGTTCATTCGTaGTCCTATTGCACAAGTACT +
Preference number: 4 (lower is better)
Translates to: SCPVSTWKKLGCPASSPPIWVHS*SYCTST
Trigger: AGTACTTGTGCAATAGGAGCACGAATGAACCCAGAT...GGGAGGACTTGAAGCAGGACAGCCCAGTTTCTTCCAAGTAGATACTGGACAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR GCA 90 bp AAGATCCCTCTGAATTACGAGATATTGTTCAAGAGTCTCATTAAAAGAAAGCCCAGAGTGCACTGGCCTTaGAGAAGGGGGACCTGTCGG +
Preference number: 4 (lower is better)
Translates to: KIPLNYEILFKSLIKRKPRVHWP*RRGTCR
Trigger: CCGACAGGTCCCCCTTCTGCAAGGCCAGTGCACTCT...GGGCTTTCTTTTAATGAGACTCTTGAACAATATCTCGTAATTCAGAGGGATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR GCA 90 bp AAGATCCCTCTGAATTACGAGATATTGTTCAAGAGTCTCATTAAAAGAAAGCCCCGATCAGTCCTGACGTaGTGCAGCACTACCTCCTTG +
Preference number: 4 (lower is better)
Translates to: KIPLNYEILFKSLIKRKPRSVLT*CSTTSL
Trigger: CAAGGAGGTAGTGCTGCAGCACGTCAGGACTGATCG...GGGCTTTCTTTTAATGAGACTCTTGAACAATATCTCGTAATTCAGAGGGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR TCA 90 bp AAGATCCCTCTGAATTACGAGATATTGTTCAAGAGTCTCATTAAAAGAAAGCCCGCCTGCAGGAAGCTGTaGAGTAAAACTCACAGAGGA +
Preference number: 4 (lower is better)
Translates to: KIPLNYEILFKSLIKRKPACRKL*SKTHRG
Trigger: TCCTCTGTGAGTTTTACTTCACAGCTTCCTGCAGGC...GGGCTTTCTTTTAATGAGACTCTTGAACAATATCTCGTAATTCAGAGGGATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR GCA 90 bp TTCCTAGCTTACTTAAAACAAAACCCTTCTGGACTCTGTGTGGCACTATCTAGAGGCACGAAGTTTCATTaGAGAACATTTCGCACTTGT +
Preference number: 4 (lower is better)
Translates to: FLAYLKQNPSGLCVALSRGTKFH*RTFRTC
Trigger: ACAAGTGCGAAATGTTCTGCAATGAAACTTCGTGCC...TCTAGATAGTGCCACACAGAGTCCAGAAGGGTTTTGTTTTAAGTAAGCTAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
3UTR CAA 72 bp GTGGCACTATCTAGAGGTGTGTACCTTCTCATTTTATaGTATCCAGAAAGCAAAGCTATGCAGAGAAAATTC +
Preference number: 4 (lower is better)
Translates to: VALSRGVYLLIL*YPESKAMQRKF
Trigger: GAATTTTCTCTGCATAGCTTTGCTTTCTGGATACAATAAAATGAGAAGGTACACACCTCTAGATAGTGCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 90 bp TCGCTTCCCAAGCCCAGTGTCCCTCTGAAGTTCCGGGCGGGGCCCTaGACACCAGCTCCAAGCCAAGGGGCTCCACCGCGGCGGAACTGC +
Preference number: 5 (lower is better)
Translates to: SLPKPSVPLKFRAGP*TPAPSQGAPPRRNC
Trigger: GCAGTTCCGCCGCGGTGGAGCCCCTTGGCTTGGAGCTGGTGTGCAGGGCCCCGCCCGGAACTTCAGAGGGACACTGGGCTTGGGAAGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 90 bp GCATGGCTTCTCTTCCCAGGCCGGCTCGCCGGGTGCAGCTTCAGTTaGTGTCGAGACCGTGACGCACAGAGGGCCGCAGAGTGGAGCCGT +
Preference number: 5 (lower is better)
Translates to: AWLLFPGRLAGCSFS*CRDRDAQRAAEWSR
Trigger: ACGGCTCCACTCTGCGGCCCTCTGTGCGTCACGGTCTCGACAGCAACTGAAGCTGCACCCGGCGAGCCGGCCTGGGAAGAGAAGCCATGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 90 bp TGGAAGCCGCGCAGGGGCCCGAGATGCACCGGGTCGTCACAGCCCTaGGGGAGCTGTAAACCGATCCAGGGCCCTAAATCCATACTGCTC +
Preference number: 5 (lower is better)
Translates to: WKPRRGPRCTGSSQP*GSCKPIQGPKSILL
Trigger: GAGCAGTATGGATTTAGGGCCCTGGATCGGTTTACAGCTCCCGCAGGGCTGTGACGACCCGGTGCATCTCGGGCCCCTGCGCGGCTTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 90 bp TGGTTATCGCCAGTAACCCACTGGAAGCCGCGCAGGGGCCCGAGATaGACCGGGTCGTCACAGCCCTGCGGGAGCTGTAAACCGATCCAG +
Preference number: 5 (lower is better)
Translates to: WLSPVTHWKPRRGPR*TGSSQPCGSCKPIQ
Trigger: CTGGATCGGTTTACAGCTCCCGCAGGGCTGTGACGACCCGGTGCATCTCGGGCCCCTGCGCGGCTTCCAGTGGGTTACTGGCGATAACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CCA 90 bp GAGGAGCGCACTGTCATCAAATGTCCTTGCAGGCGCTGGCAGGCCTaGCTGGCATCGAGGAAGGTCGCGGGGCCCTGGAAAAGCGCGAAG +
Preference number: 5 (lower is better)
Translates to: EERTVIKCPCRRWQA*LASRKVAGPWKSAK
Trigger: CTTCGCGCTTTTCCAGGGCCCCGCGACCTTCCTCGATGCCAGCCAGGCCTGCCAGCGCCTGCAAGGACATTTGATGACAGTGCGCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CCA 90 bp AGCTTCAGTTGCTGTCGAGACCGTGACGCACAGAGGGCCGCAGAGTaGAGCCGTCTGGTCGTTGGGCCGCGCCCACCTGCTGTAACTGGT +
Preference number: 5 (lower is better)
Translates to: SFSCCRDRDAQRAAE*SRLVVGPRPPAVTG
Trigger: ACCAGTTACAGCAGGTGGGCGCGGCCCAACGACCAGACGGCTCCACTCTGCGGCCCTCTGTGCGTCACGGTCTCGACAGCAACTGAAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 90 bp GCTGGCAATGGAGATGCCAATGAGCACGCCAGAGTGCACTGGCCTTaGAGAAGGGGGACCTGTCGGAGAGCCTGGCGTAGGGCTGACTGG +
Preference number: 5 (lower is better)
Translates to: AGNGDANEHARVHWP*RRGTCRRAWRRADW
Trigger: CCAGTCAGCCCTACGCCAGGCTCTCCGACAGGTCCCCCTTCTGCAAGGCCAGTGCACTCTGGCGTGCTCATTGGCATCTCCATTGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CCA 90 bp AGCGCACTGTCATCAAATGTCCTTGCAGGCGCTGGCAGGCCTGGCTaGCATCGAGGAAGGTCGCGGGGCCCTGGAAAAGCGCGAAGCACT +
Preference number: 5 (lower is better)
Translates to: SALSSNVLAGAGRPG*HRGRSRGPGKARST
Trigger: AGTGCTTCGCGCTTTTCCAGGGCCCCGCGACCTTCCTCGATGCCAGCCAGGCCTGCCAGCGCCTGCAAGGACATTTGATGACAGTGCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CCA 90 bp CCTTGCAGAAGGGGGACCTGTCGGAGAGCCTGGCGTAGGGCTGACTaGAGGCTCCCCAGAGCCCTCCTCTTCCTTGGTGTCTTCCCTAAC +
Preference number: 5 (lower is better)
Translates to: PCRRGTCRRAWRRAD*RLPRALLFLGVFPN
Trigger: GTTAGGGAAGACACCAAGGAAGAGGAGGGCTCTGGGGAGCCTCCAGTCAGCCCTACGCCAGGCTCTCCGACAGGTCCCCCTTCTGCAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS TCA 90 bp CCAAAAGCGCCACCACCAGGGACAGGCTGGCAATGGAGATGCCAATaGGCACGCCAGAGTGCACTGGCCTTGCAGAAGGGGGACCTGTCG +
Preference number: 5 (lower is better)
Translates to: PKAPPPGTGWQWRCQ*ARQSALALQKGDLS
Trigger: CGACAGGTCCCCCTTCTGCAAGGCCAGTGCACTCTGGCGTGCTCATTGGCATCTCCATTGCCAGCCTGTCCCTGGTGGTGGCGCTTTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS TCA 90 bp TTGTACTCCAGCTCTGCACGAGCAGCGCCCTGCTTCTTGCGCAGGTaGCAGAGAAGCGCCAAAAGCGCCACCACCAGGGACAGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: LYSSSARAAPCFLRR*QRSAKSATTRDRLA
Trigger: TGCCAGCCTGTCCCTGGTGGTGGCGCTTTTGGCGCTTCTCTGTCACCTGCGCAAGAAGCAGGGCGCTGCTCGTGCAGAGCTGGAGTACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 90 bp ACTTGTGCGGTTCATCCGGCTTGGGTGCGAAGCCTGGAGCGCAGATaGATCGGTAGTCGGTGGGGCTCACTGGCTGGCACTGAAACTCGC +
Preference number: 5 (lower is better)
Translates to: TCAVHPAWVRSLERR*IGSRWGSLAGTETR
Trigger: GCGAGTTTCAGTGCCAGCCAGTGAGCCCCACCGACTACCGATGCATCTGCGCTCCAGGCTTCGCACCCAAGCCGGATGAACCGCACAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 90 bp CCGCCCTTGGTGTTAACACAGAGCTGGGGACATGGATTGGGCCCCTaGTTACAGTCATCCACGTCCTCACACCGGTGTCCGTCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: PPLVLTQSWGHGLGP*LQSSTSSHRCPSAA
Trigger: GGCTGCAGACGGACACCGGTGTGAGGACGTGGATGACTGTAAGCAGGGGCCCAATCCATGTCCCCAGCTCTGTGTTAACACCAAGGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 90 bp ATGCGCACTTGTACTCCAGCTCTGCACGAGCAGCGCCCTGCTTCTTaGGCAGGTGACAGAGAAGCGCCAAAAGCGCCACCACCAGGGACA +
Preference number: 5 (lower is better)
Translates to: MRTCTPALHEQRPAS*AGDREAPKAPPPGT
Trigger: TGTCCCTGGTGGTGGCGCTTTTGGCGCTTCTCTGTCACCTGCGCAAGAAGCAGGGCGCTGCTCGTGCAGAGCTGGAGTACAAGTGCGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 90 bp CAGCACTACCTCCTTGGCGGAAGATGCGCACTTGTACTCCAGCTCTaGACGAGCAGCGCCCTGCTTCTTGCGCAGGTGACAGAGAAGCGC +
Preference number: 5 (lower is better)
Translates to: QHYLLGGRCALVLQL*TSSALLLAQVTEKR
Trigger: GCGCTTCTCTGTCACCTGCGCAAGAAGCAGGGCGCTGCTCGTGCAGAGCTGGAGTACAAGTGCGCATCTTCCGCCAAGGAGGTAGTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 90 bp CCGATCAGTCCTGACGTGCTGCAGCACTACCTCCTTGGCGGAAGATaGGCACTTGTACTCCAGCTCTGCACGAGCAGCGCCCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: PISPDVLQHYLLGGR*ALVLQLCTSSALLL
Trigger: AAGAAGCAGGGCGCTGCTCGTGCAGAGCTGGAGTACAAGTGCGCATCTTCCGCCAAGGAGGTAGTGCTGCAGCACGTCAGGACTGATCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 90 bp GGGCCCCTGCTTACAGTCATCCACGTCCTCACACCGGTGTCCGTCTaGAGCCAACTGGTAGCCTGTCTCACACATACAGGAGTAAGAGCC +
Preference number: 5 (lower is better)
Translates to: GPLLTVIHVLTPVSV*SQLVACLTHTGVRA
Trigger: GGCTCTTACTCCTGTATGTGTGAGACAGGCTACCAGTTGGCTGCAGACGGACACCGGTGTGAGGACGTGGATGACTGTAAGCAGGGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CCA 90 bp TGCGGGAGCTGTAAACCGATCCAGGGCCCTAAATCCATACTGCTCTaGCTCAGCAGAAGGGAGATGACATCGGCAGCCACTGAGGAGCGC +
Preference number: 5 (lower is better)
Translates to: CGSCKPIQGPKSILL*LSRREMTSAATEER
Trigger: GCGCTCCTCAGTGGCTGCCGATGTCATCTCCCTTCTGCTGAGCCAGAGCAGTATGGATTTAGGGCCCTGGATCGGTTTACAGCTCCCGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR CAA 90 bp TCCAGTATCTACTTGGAAGAAACTGGGCTGTCCTGCTTCAAGTCCTCCCTACCCCCTGTGGGCTGCAGCTaGGCTAGTGCGGAGAGCCCC +
Preference number: 5 (lower is better)
Translates to: SSIYLEETGLSCFKSSLPPVGCS*ASAESP
Trigger: GGGGCTCTCCGCACTAGCCAAGCTGCAGCCCACAGG...GGGTAGGGAGGACTTGAAGCAGGACAGCCCAGTTTCTTCCAAGTAGATACTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 90 bp TTCATTGCAGAACATTTCGCACTTGTGCGGTTCATCCGGCTTGGGTaGGAAGCCTGGAGCGCAGATGCATCGGTAGTCGGTGGGGCTCAC +
Preference number: 5 (lower is better)
Translates to: FIAEHFALVRFIRLG*EAWSADASVVGGAH
Trigger: GTGAGCCCCACCGACTACCGATGCATCTGCGCTCCAGGCTTCGCACCCAAGCCGGATGAACCGCACAAGTGCGAAATGTTCTGCAATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 90 bp TCGTGCTCCTATTGCACAAGTACTCACAGCCACCATTCTCCACGCTaGAATTCCAGGCTCCTGTCGCTTCCCAAGCCCAGTGTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: SCSYCTSTHSHHSPR*NSRLLSLPKPSVPL
Trigger: CAGAGGGACACTGGGCTTGGGAAGCGACAGGAGCCTGGAATTGCAGCGTGGAGAATGGTGGCTGTGAGTACTTGTGCAATAGGAGCACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 90 bp CCTGCAGGTCCATGTCTCTGGGGCAGAGGCATCTGGGTTCATTCGTaGTCCTATTGCACAAGTACTCACAGCCACCATTCTCCACGCTGC +
Preference number: 5 (lower is better)
Translates to: PAGPCLWGRGIWVHS*SYCTSTHSHHSPRC
Trigger: GCAGCGTGGAGAATGGTGGCTGTGAGTACTTGTGCAATAGGAGCACGAATGAACCCAGATGCCTCTGCCCCAGAGACATGGACCTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CCA 90 bp AACGTCCATCGGCCTGCAGGTCCATGTCTCTGGGGCAGAGGCATCTaGGTTCATTCGTGCTCCTATTGCACAAGTACTCACAGCCACCAT +
Preference number: 5 (lower is better)
Translates to: NVHRPAGPCLWGRGI*VHSCSYCTSTHSHH
Trigger: ATGGTGGCTGTGAGTACTTGTGCAATAGGAGCACGAATGAACCCAGATGCCTCTGCCCCAGAGACATGGACCTGCAGGCCGATGGACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS TCA 90 bp TCCAGGGCCCTAAATCCATACTGCTCTGGCTCAGCAGAAGGGAGATaGCATCGGCAGCCACTGAGGAGCGCACTGTCATCAAATGTCCTT +
Preference number: 5 (lower is better)
Translates to: SRALNPYCSGSAEGR*HRQPLRSALSSNVL
Trigger: AAGGACATTTGATGACAGTGCGCTCCTCAGTGGCTGCCGATGTCATCTCCCTTCTGCTGAGCCAGAGCAGTATGGATTTAGGGCCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS TCA 90 bp CCTCAGGATCGCGAGTATTCACCGTCAGAGGCCTGCAGGAAGCTGTaGAGTAAAACTCACAGAGGAAACCCTGGGTCTCAGTCTCGCATG +
Preference number: 5 (lower is better)
Translates to: PQDREYSPSEACRKL*SKTHRGNPGSQSRM
Trigger: CATGCGAGACTGAGACCCAGGGTTTCCTCTGTGAGTTTTACTTCACAGCTTCCTGCAGGCCTCTGACGGTGAATACTCGCGATCCTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 90 bp CCATGTCTCTGGGGCAGAGGCATCTGGGTTCATTCGTGCTCCTATTaGACAAGTACTCACAGCCACCATTCTCCACGCTGCAATTCCAGG +
Preference number: 5 (lower is better)
Translates to: PCLWGRGIWVHSCSY*TSTHSHHSPRCNSR
Trigger: CCTGGAATTGCAGCGTGGAGAATGGTGGCTGTGAGTACTTGTGCAATAGGAGCACGAATGAACCCAGATGCCTCTGCCCCAGAGACATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 90 bp ACAAAAATGCTCGCAGAGTTCGTTGCACGATTGAACCACAGGTCTTaGACACGAACGTCCATCGGCCTGCAGGTCCATGTCTCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: TKMLAEFVARLNHRS*TRTSIGLQVHVSGA
Trigger: TGCCCCAGAGACATGGACCTGCAGGCCGATGGACGTTCGTGTGCAAGACCTGTGGTTCAATCGTGCAACGAACTCTGCGAGCATTTTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR CAA 90 bp TCCAGTATCTACTTGGAAGAAACTGGGCTGTCCTGCTTCAAGTCCTCCCTACCCAGCTGGGGACATGGATaGGGCCCCTGCTTACAGTCA +
Preference number: 5 (lower is better)
Translates to: SSIYLEETGLSCFKSSLPSWGHG*GPCLQS
Trigger: TGACTGTAAGCAGGGGCCCAATCCATGTCCCCAGCT...GGGTAGGGAGGACTTGAAGCAGGACAGCCCAGTTTCTTCCAAGTAGATACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR CAA 90 bp TCCAGTATCTACTTGGAAGAAACTGGGCTGTCCTGCTTCAAGTCCTCCCTACCCGAGCCCTCCTCTTCCTaGGTGTCTTCCCTAACAGGG +
Preference number: 5 (lower is better)
Translates to: SSIYLEETGLSCFKSSLPEPSSS*VSSLTG
Trigger: CCCTGTTAGGGAAGACACCAAGGAAGAGGAGGGCTC...GGGTAGGGAGGACTTGAAGCAGGACAGCCCAGTTTCTTCCAAGTAGATACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 90 bp GCCTTCAGGGCATTCACAAACAGTAGGAGAGTTAGGGTCACAGTCTaGTGGGCACGAAGTTTCATTGCAGAACATTTCGCACTTGTGCGG +
Preference number: 5 (lower is better)
Translates to: AFRAFTNSRRVRVTV*WARSFIAEHFALVR
Trigger: CCGCACAAGTGCGAAATGTTCTGCAATGAAACTTCGTGCCCAGCAGACTGTGACCCTAACTCTCCTACTGTTTGTGAATGCCCTGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CCA 90 bp TGCAGCCAACTGGTAGCCTGTCTCACACATACAGGAGTAAGAGCCTaGCACTTCAGCGTTGCTGACACAAAAATGCTCGCAGAGTTCGTT +
Preference number: 5 (lower is better)
Translates to: CSQLVACLTHTGVRA*HFSVADTKMLAEFV
Trigger: AACGAACTCTGCGAGCATTTTTGTGTCAGCAACGCTGAAGTGCCAGGCTCTTACTCCTGTATGTGTGAGACAGGCTACCAGTTGGCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS TCA 90 bp CTGTCTCACACATACAGGAGTAAGAGCCTGGCACTTCAGCGTTGCTaGCACAAAAATGCTCGCAGAGTTCGTTGCACGATTGAACCACAG +
Preference number: 5 (lower is better)
Translates to: LSHTYRSKSLALQRC*HKNARRVRCTIEPQ
Trigger: CTGTGGTTCAATCGTGCAACGAACTCTGCGAGCATTTTTGTGTCAGCAACGCTGAAGTGCCAGGCTCTTACTCCTGTATGTGTGAGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR CAA 90 bp GGCTCTTCTCTGGTTATTATACCAGCCAGGGTGCTTTTAAGTTGCCAGAGAACACCTGGCACTTCAGCGTaGCTGACACAAAAATGCTCG +
Preference number: 5 (lower is better)
Translates to: GSSLVIIPARVLLSCQRTPGTSA*LTQKCS
Trigger: CGAGCATTTTTGTGTCAGCAACGCTGAAGTGCCAGG...TGTTCTCTGGCAACTTAAAAGCACCCTGGCTGGTATAATAACCAGAGAAGAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR CAA 90 bp CACAACTCATGCTTTACTGGAAGGTGCTTCCATCTGTCAGGCTCTGATATGTTGTCATTCGTGCTCCTATaGCACAAGTACTCACAGCCA +
Preference number: 5 (lower is better)
Translates to: HNSCFTGRCFHLSGSDMLSFVLL*HKYSQP
Trigger: TGGCTGTGAGTACTTGTGCAATAGGAGCACGAATGA...CAACATATCAGAGCCTGACAGATGGAAGCACCTTCCAGTAAAGCATGAGTTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS-3UTR CAA 90 bp AGTTGTCCTGAAATGACTGGACAATGTCCCTGTGGATGTTGTCAAAATGCAGATGGGCACGAAGTTTCATaGCAGAACATTTCGCACTTG +
Preference number: 5 (lower is better)
Translates to: SCPEMTGQCPCGCCQNADGHEVS*QNISHL
Trigger: CAAGTGCGAAATGTTCTGCAATGAAACTTCGTGCCC...ATCTGCATTTTGACAACATCCACAGGGACATTGTCCAGTCATTTCAGGACAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CCA 72 bp TGCTGTCGAGACCGTGACGCACAGAGGGCCGCAGAGTaGAGCCGTCTGGTCGTTGGGCCGCGCCCACCTGCT +
Preference number: 6 (lower is better)
Translates to: CCRDRDAQRAAE*SRLVVGPRPPA
Trigger: AGCAGGTGGGCGCGGCCCAACGACCAGACGGCTCCACTCTGCGGCCCTCTGTGCGTCACGGTCTCGACAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 72 bp CTCTTCCCAGGCCGGCTCGCCGGGTGCAGCTTCAGTTaGTGTCGAGACCGTGACGCACAGAGGGCCGCAGAG +
Preference number: 6 (lower is better)
Translates to: LFPGRLAGCSFS*CRDRDAQRAAE
Trigger: CTCTGCGGCCCTCTGTGCGTCACGGTCTCGACAGCAACTGAAGCTGCACCCGGCGAGCCGGCCTGGGAAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CCA 72 bp CACTGGCCTTGCAGAAGGGGGACCTGTCGGAGAGCCTaGCGTAGGGCTGACTGGAGGCTCCCCAGAGCCCTC +
Preference number: 6 (lower is better)
Translates to: HWPCRRGTCRRA*RRADWRLPRAL
Trigger: GAGGGCTCTGGGGAGCCTCCAGTCAGCCCTACGCCAGGCTCTCCGACAGGTCCCCCTTCTGCAAGGCCAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS TCA 72 bp GGCTCCACCGCGGCGGAACTGCCTACCGGCAGCGTTTaGAAGTCCGCACCACTGACCCCGAACGGGGTGTTG +
Preference number: 6 (lower is better)
Translates to: GSTAAELPTGSV*KSAPLTPNGVL
Trigger: CAACACCCCGTTCGGGGTCAGTGGTGCGGACTTTCAAACGCTGCCGGTAGGCAGTTCCGCCGCGGTGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS TCA 72 bp CCAGGCTCCTGTCGCTTCCCAAGCCCAGTGTCCCTCTaGAGTTCCGGGCGGGGCCCTGCACACCAGCTCCAA +
Preference number: 6 (lower is better)
Translates to: PGSCRFPSPVSL*SSGRGPAHQLQ
Trigger: TTGGAGCTGGTGTGCAGGGCCCCGCCCGGAACTTCAGAGGGACACTGGGCTTGGGAAGCGACAGGAGCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 72 bp CGCAGGGGCCCGAGATGCACCGGGTCGTCACAGCCCTaGGGGAGCTGTAAACCGATCCAGGGCCCTAAATCC +
Preference number: 6 (lower is better)
Translates to: RRGPRCTGSSQP*GSCKPIQGPKS
Trigger: GGATTTAGGGCCCTGGATCGGTTTACAGCTCCCGCAGGGCTGTGACGACCCGGTGCATCTCGGGCCCCTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 72 bp CCAGTAACCCACTGGAAGCCGCGCAGGGGCCCGAGATaGACCGGGTCGTCACAGCCCTGCGGGAGCTGTAAA +
Preference number: 6 (lower is better)
Translates to: PVTHWKPRRGPR*TGSSQPCGSCK
Trigger: TTTACAGCTCCCGCAGGGCTGTGACGACCCGGTGCATCTCGGGCCCCTGCGCGGCTTCCAGTGGGTTACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CAA 72 bp GGGCTCCACCGCGGCGGAACTGCCTACCGGCAGCGTTaGAAAGTCCGCACCACTGACCCCGAACGGGGTGTT +
Preference number: 6 (lower is better)
Translates to: GLHRGGTAYRQR*KVRTTDPERGV
Trigger: AACACCCCGTTCGGGGTCAGTGGTGCGGACTTTCAAACGCTGCCGGTAGGCAGTTCCGCCGCGGTGGAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CCA 72 bp CGCACAGAGGGCCGCAGAGTGGAGCCGTCTGGTCGTTaGGCCGCGCCCACCTGCTGTAACTGGTGTGGTTAT +
Preference number: 6 (lower is better)
Translates to: RTEGRRVEPSGR*AAPTCCNWCGY
Trigger: ATAACCACACCAGTTACAGCAGGTGGGCGCGGCCCAACGACCAGACGGCTCCACTCTGCGGCCCTCTGTGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS TCA 72 bp AGCTCTGCACGAGCAGCGCCCTGCTTCTTGCGCAGGTaGCAGAGAAGCGCCAAAAGCGCCACCACCAGGGAC +
Preference number: 6 (lower is better)
Translates to: SSARAAPCFLRR*QRSAKSATTRD
Trigger: GTCCCTGGTGGTGGCGCTTTTGGCGCTTCTCTGTCACCTGCGCAAGAAGCAGGGCGCTGCTCGTGCAGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 72 bp GGAGATGCCAATGAGCACGCCAGAGTGCACTGGCCTTaGAGAAGGGGGACCTGTCGGAGAGCCTGGCGTAGG +
Preference number: 6 (lower is better)
Translates to: GDANEHARVHWP*RRGTCRRAWRR
Trigger: CCTACGCCAGGCTCTCCGACAGGTCCCCCTTCTGCAAGGCCAGTGCACTCTGGCGTGCTCATTGGCATCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CCA 72 bp TCATCAAATGTCCTTGCAGGCGCTGGCAGGCCTGGCTaGCATCGAGGAAGGTCGCGGGGCCCTGGAAAAGCG +
Preference number: 6 (lower is better)
Translates to: SSNVLAGAGRPG*HRGRSRGPGKA
Trigger: CGCTTTTCCAGGGCCCCGCGACCTTCCTCGATGCCAGCCAGGCCTGCCAGCGCCTGCAAGGACATTTGATGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CAA 90 bp GTCCTGACGTGCTGCAGCACTACCTCCTTGGCGGAAGATGCGCACTaGTACTCCAGCTCTGCACGAGCAGCGCCCTGCTTCTTGCGCAGG +
Preference number: 6 (lower is better)
Translates to: VLTCCSTTSLAEDAH*YSSSARAAPCFLRR
Trigger: CCTGCGCAAGAAGCAGGGCGCTGCTCGTGCAGAGCTGGAGTACAAGTGCGCATCTTCCGCCAAGGAGGTAGTGCTGCAGCACGTCAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS TCA 72 bp CCACCACCAGGGACAGGCTGGCAATGGAGATGCCAATaGGCACGCCAGAGTGCACTGGCCTTGCAGAAGGGG +
Preference number: 6 (lower is better)
Translates to: PPPGTGWQWRCQ*ARQSALALQKG
Trigger: CCCCTTCTGCAAGGCCAGTGCACTCTGGCGTGCTCATTGGCATCTCCATTGCCAGCCTGTCCCTGGTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 72 bp GCAGCCACTGAGGAGCGCACTGTCATCAAATGTCCTTaGAGGCGCTGGCAGGCCTGGCTGGCATCGAGGAAG +
Preference number: 6 (lower is better)
Translates to: AATEERTVIKCP*RRWQAWLASRK
Trigger: CTTCCTCGATGCCAGCCAGGCCTGCCAGCGCCTGCAAGGACATTTGATGACAGTGCGCTCCTCAGTGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 72 bp CCTGACGTGCTGCAGCACTACCTCCTTGGCGGAAGATaGGCACTTGTACTCCAGCTCTGCACGAGCAGCGCC +
Preference number: 6 (lower is better)
Translates to: PDVLQHYLLGGR*ALVLQLCTSSA
Trigger: GGCGCTGCTCGTGCAGAGCTGGAGTACAAGTGCGCATCTTCCGCCAAGGAGGTAGTGCTGCAGCACGTCAGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CCA 72 bp ACTGTCATCAAATGTCCTTGCAGGCGCTGGCAGGCCTaGCTGGCATCGAGGAAGGTCGCGGGGCCCTGGAAA +
Preference number: 6 (lower is better)
Translates to: TVIKCPCRRWQA*LASRKVAGPWK
Trigger: TTTCCAGGGCCCCGCGACCTTCCTCGATGCCAGCCAGGCCTGCCAGCGCCTGCAAGGACATTTGATGACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CCA 72 bp AAACTCACAGAGGAAACCCTGGGTCTCAGTCTCGCATaGCTTCTCTTCCCAGGCCGGCTCGCCGGGTGCAGC +
Preference number: 6 (lower is better)
Translates to: KLTEETLGLSLA*LLFPGRLAGCS
Trigger: GCTGCACCCGGCGAGCCGGCCTGGGAAGAGAAGCCATGCGAGACTGAGACCCAGGGTTTCCTCTGTGAGTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CCA 72 bp GGCAATGGAGATGCCAATGAGCACGCCAGAGTGCACTaGCCTTGCAGAAGGGGGACCTGTCGGAGAGCCTGG +
Preference number: 6 (lower is better)
Translates to: GNGDANEHARVH*PCRRGTCRRAW
Trigger: CCAGGCTCTCCGACAGGTCCCCCTTCTGCAAGGCCAGTGCACTCTGGCGTGCTCATTGGCATCTCCATTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS TCA 72 bp CCCTGGAAAAGCGCGAAGCACTCATGCTCCACGCATTaGCTGCCTGTGGGCTGCAGCTTGGCTAGTGCGGAG +
Preference number: 6 (lower is better)
Translates to: PWKSAKHSCSTH*LPVGCSLASAE
Trigger: CTCCGCACTAGCCAAGCTGCAGCCCACAGGCAGTCAATGCGTGGAGCATGAGTGCTTCGCGCTTTTCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 72 bp TGTACTCCAGCTCTGCACGAGCAGCGCCCTGCTTCTTaGGCAGGTGACAGAGAAGCGCCAAAAGCGCCACCA +
Preference number: 6 (lower is better)
Translates to: CTPALHEQRPAS*AGDREAPKAPP
Trigger: TGGTGGCGCTTTTGGCGCTTCTCTGTCACCTGCGCAAGAAGCAGGGCGCTGCTCGTGCAGAGCTGGAGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 72 bp CTCCTTGGCGGAAGATGCGCACTTGTACTCCAGCTCTaGACGAGCAGCGCCCTGCTTCTTGCGCAGGTGACA +
Preference number: 6 (lower is better)
Translates to: LLGGRCALVLQL*TSSALLLAQVT
Trigger: TGTCACCTGCGCAAGAAGCAGGGCGCTGCTCGTGCAGAGCTGGAGTACAAGTGCGCATCTTCCGCCAAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CAA 72 bp TGCTGCAGCACTACCTCCTTGGCGGAAGATGCGCACTaGTACTCCAGCTCTGCACGAGCAGCGCCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: CCSTTSLAEDAH*YSSSARAAPCF
Trigger: GAAGCAGGGCGCTGCTCGTGCAGAGCTGGAGTACAAGTGCGCATCTTCCGCCAAGGAGGTAGTGCTGCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CAA 90 bp TTCTGCAGCGTCCGATCAGTCCTGACGTGCTGCAGCACTACCTCCTaGGCGGAAGATGCGCACTTGTACTCCAGCTCTGCACGAGCAGCG +
Preference number: 6 (lower is better)
Translates to: FCSVRSVLTCCSTTS*AEDAHLYSSSARAA
Trigger: CGCTGCTCGTGCAGAGCTGGAGTACAAGTGCGCATCTTCCGCCAAGGAGGTAGTGCTGCAGCACGTCAGGACTGATCGGACGCTGCAGAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 72 bp GTGTTAACACAGAGCTGGGGACATGGATTGGGCCCCTaGTTACAGTCATCCACGTCCTCACACCGGTGTCCG +
Preference number: 6 (lower is better)
Translates to: VLTQSWGHGLGP*LQSSTSSHRCP
Trigger: CGGACACCGGTGTGAGGACGTGGATGACTGTAAGCAGGGGCCCAATCCATGTCCCCAGCTCTGTGTTAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 72 bp CAGAACTTCTGCAGCGTCCGATCAGTCCTGACGTGCTaGAGCACTACCTCCTTGGCGGAAGATGCGCACTTG +
Preference number: 6 (lower is better)
Translates to: QNFCSVRSVLTC*STTSLAEDAHL
Trigger: CAAGTGCGCATCTTCCGCCAAGGAGGTAGTGCTGCAGCACGTCAGGACTGATCGGACGCTGCAGAAGTTCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CAA 72 bp GTCCGATCAGTCCTGACGTGCTGCAGCACTACCTCCTaGGCGGAAGATGCGCACTTGTACTCCAGCTCTGCA +
Preference number: 6 (lower is better)
Translates to: VRSVLTCCSTTS*AEDAHLYSSSA
Trigger: TGCAGAGCTGGAGTACAAGTGCGCATCTTCCGCCAAGGAGGTAGTGCTGCAGCACGTCAGGACTGATCGGAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CCA 72 bp CGGCCTGCAGGTCCATGTCTCTGGGGCAGAGGCATCTaGGTTCATTCGTGCTCCTATTGCACAAGTACTCAC +
Preference number: 6 (lower is better)
Translates to: RPAGPCLWGRGI*VHSCSYCTSTH
Trigger: GTGAGTACTTGTGCAATAGGAGCACGAATGAACCCAGATGCCTCTGCCCCAGAGACATGGACCTGCAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CCA 72 bp TGGAGCGCAGATGCATCGGTAGTCGGTGGGGCTCACTaGCTGGCACTGAAACTCGCAGTTAGATCCGAAACA +
Preference number: 6 (lower is better)
Translates to: WSADASVVGGAH*LALKLAVRSET
Trigger: TGTTTCGGATCTAACTGCGAGTTTCAGTGCCAGCCAGTGAGCCCCACCGACTACCGATGCATCTGCGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CAA 90 bp CACAAAAATGCTCGCAGAGTTCGTTGCACGATTGAACCACAGGTCTaGCACACGAACGTCCATCGGCCTGCAGGTCCATGTCTCTGGGGC +
Preference number: 6 (lower is better)
Translates to: HKNARRVRCTIEPQV*HTNVHRPAGPCLWG
Trigger: GCCCCAGAGACATGGACCTGCAGGCCGATGGACGTTCGTGTGCAAGACCTGTGGTTCAATCGTGCAACGAACTCTGCGAGCATTTTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS TCA 72 bp TCCCTAACAGGGATGGGGTCACAGTCTTTGCTAATCTaGCCAGCAAGGGCTGTGTCAGGCCCGCAGATACAC +
Preference number: 6 (lower is better)
Translates to: SLTGMGSQSLLI*PARAVSGPQIH
Trigger: GTGTATCTGCGGGCCTGACACAGCCCTTGCTGGTCAGATTAGCAAAGACTGTGACCCCATCCCTGTTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 72 bp TGGGGCAGAGGCATCTGGGTTCATTCGTGCTCCTATTaGACAAGTACTCACAGCCACCATTCTCCACGCTGC +
Preference number: 6 (lower is better)
Translates to: WGRGIWVHSCSY*TSTHSHHSPRC
Trigger: GCAGCGTGGAGAATGGTGGCTGTGAGTACTTGTGCAATAGGAGCACGAATGAACCCAGATGCCTCTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 72 bp CTTACAGTCATCCACGTCCTCACACCGGTGTCCGTCTaGAGCCAACTGGTAGCCTGTCTCACACATACAGGA +
Preference number: 6 (lower is better)
Translates to: LTVIHVLTPVSV*SQLVACLTHTG
Trigger: TCCTGTATGTGTGAGACAGGCTACCAGTTGGCTGCAGACGGACACCGGTGTGAGGACGTGGATGACTGTAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CCA 72 bp AAGCATTCGAAGCCGCCCTTGGTGTTAACACAGAGCTaGGGACATGGATTGGGCCCCTGCTTACAGTCATCC +
Preference number: 6 (lower is better)
Translates to: KHSKPPLVLTQS*GHGLGPCLQSS
Trigger: GGATGACTGTAAGCAGGGGCCCAATCCATGTCCCCAGCTCTGTGTTAACACCAAGGGCGGCTTCGAATGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CAA 72 bp CTGGGGCAGAGGCATCTGGGTTCATTCGTGCTCCTATaGCACAAGTACTCACAGCCACCATTCTCCACGCTG +
Preference number: 6 (lower is better)
Translates to: LGQRHLGSFVLL*HKYSQPPFSTL
Trigger: CAGCGTGGAGAATGGTGGCTGTGAGTACTTGTGCAATAGGAGCACGAATGAACCCAGATGCCTCTGCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS TCA 72 bp CTAAATCCATACTGCTCTGGCTCAGCAGAAGGGAGATaGCATCGGCAGCCACTGAGGAGCGCACTGTCATCA +
Preference number: 6 (lower is better)
Translates to: LNPYCSGSAEGR*HRQPLRSALSS
Trigger: TGATGACAGTGCGCTCCTCAGTGGCTGCCGATGTCATCTCCCTTCTGCTGAGCCAGAGCAGTATGGATTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS TCA 72 bp CGCGAGTATTCACCGTCAGAGGCCTGCAGGAAGCTGTaGAGTAAAACTCACAGAGGAAACCCTGGGTCTCAG +
Preference number: 6 (lower is better)
Translates to: REYSPSEACRKL*SKTHRGNPGSQ
Trigger: CTGAGACCCAGGGTTTCCTCTGTGAGTTTTACTTCACAGCTTCCTGCAGGCCTCTGACGGTGAATACTCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 72 bp TATTGCACAAGTACTCACAGCCACCATTCTCCACGCTaGAATTCCAGGCTCCTGTCGCTTCCCAAGCCCAGT +
Preference number: 6 (lower is better)
Translates to: YCTSTHSHHSPR*NSRLLSLPKPS
Trigger: ACTGGGCTTGGGAAGCGACAGGAGCCTGGAATTGCAGCGTGGAGAATGGTGGCTGTGAGTACTTGTGCAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CAA 90 bp TCCATGTCTCTGGGGCAGAGGCATCTGGGTTCATTCGTGCTCCTATaGCACAAGTACTCACAGCCACCATTCTCCACGCTGCAATTCCAG +
Preference number: 6 (lower is better)
Translates to: SMSLGQRHLGSFVLL*HKYSQPPFSTLQFQ
Trigger: CTGGAATTGCAGCGTGGAGAATGGTGGCTGTGAGTACTTGTGCAATAGGAGCACGAATGAACCCAGATGCCTCTGCCCCAGAGACATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS GCA 72 bp CCATGTCTCTGGGGCAGAGGCATCTGGGTTCATTCGTaGTCCTATTGCACAAGTACTCACAGCCACCATTCT +
Preference number: 6 (lower is better)
Translates to: PCLWGRGIWVHS*SYCTSTHSHHS
Trigger: AGAATGGTGGCTGTGAGTACTTGTGCAATAGGAGCACGAATGAACCCAGATGCCTCTGCCCCAGAGACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CAA 90 bp ATAGGAGCCAGGGAAGTTTCGACATTCACTGGTGAAGCATTCGCCTaGACTGCACTCATCAATGTCCGTGCATACGGAACCCTCGTCCAG +
Preference number: 6 (lower is better)
Translates to: IGAREVSTFTGEAFA*TALINVRAYGTLVQ
Trigger: CTGGACGAGGGTTCCGTATGCACGGACATTGATGAGTGCAGTCAAGGCGAATGCTTCACCAGTGAATGTCGAAACTTCCCTGGCTCCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS CCA 72 bp CTGGTAGCCTGTCTCACACATACAGGAGTAAGAGCCTaGCACTTCAGCGTTGCTGACACAAAAATGCTCGCA +
Preference number: 6 (lower is better)
Translates to: LVACLTHTGVRA*HFSVADTKMLA
Trigger: TGCGAGCATTTTTGTGTCAGCAACGCTGAAGTGCCAGGCTCTTACTCCTGTATGTGTGAGACAGGCTACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5
CDS TCA 72 bp ACATACAGGAGTAAGAGCCTGGCACTTCAGCGTTGCTaGCACAAAAATGCTCGCAGAGTTCGTTGCACGATT +
Preference number: 6 (lower is better)
Translates to: TYRSKSLALQRC*HKNARRVRCTI
Trigger: AATCGTGCAACGAACTCTGCGAGCATTTTTGTGTCAGCAACGCTGAAGTGCCAGGCTCTTACTCCTGTATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099270.5