Pregenerated sensors for THAP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026279Ensembl transcript IDs: ENSMUST00000112905.4, ENSMUST00000187445.2, ENSMUST00000189472.2, ENSMUST00000189728.7, ENSMUST00000190116.7
Found 280 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | AGGGCGAATGGGAGGAGTGAGGAGCGCTGTCTGCTGGGTGATGCTTaGCATGTCAGGGCACCCACACAGCACAGCTCACACCCAAGGAGA | + |
Preference number: 1 (lower is better) Translates to: RANGRSEERCLLGDA*HVRAPTQHSSHPRR Trigger: TCTCCTTGGGTGTGAGCTGTGCTGTGTGGGTGCCCTGACATGTCAAGCATCACCCAGCAGACAGCGCTCCTCACTCCTCCCATTCGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CCA 90 bp | TGCTCCACATGGGGCTCCTTGGCAAAGGAGATCCTGGAGACGGAATaGGATGAGACACACAGCTCCTGCCCATTCACTTCACCCTCCTCC | + |
Preference number: 1 (lower is better) Translates to: CSTWGSLAKEILETE*DETHSSCPFTSPSS Trigger: GGAGGAGGGTGAAGTGAATGGGCAGGAGCTGTGTGTCTCATCCCATTCCGTCTCCAGGATCTCCTTTGCCAAGGAGCCCCATGTGGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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3UTR TCA 90 bp | CACATGGGGCTCCTTGGCAAAGGAGATCCTGGAGACGGAATGGGATaGGACACACAGCTCCTGCCCATTCACTTCACCCTCCTCCACTTC | + |
Preference number: 1 (lower is better) Translates to: HMGLLGKGDPGDGMG*DTQLLPIHFTLLHF Trigger: GAAGTGGAGGAGGGTGAAGTGAATGGGCAGGAGCTGTGTGTCTCATCCCATTCCGTCTCCAGGATCTCCTTTGCCAAGGAGCCCCATGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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3UTR CCA 90 bp | TCAGGCTACAGGGTAAAGGGAGAGCCTGGAGTGCAGGGGAAGTGGTaGCCTTCCCTAGCACAAGAGGATCTTTCAGCATACCCTTGGCAG | + |
Preference number: 1 (lower is better) Translates to: SGYRVKGEPGVQGKW*PSLAQEDLSAYPWQ Trigger: CTGCCAAGGGTATGCTGAAAGATCCTCTTGTGCTAGGGAAGGCCACCACTTCCCCTGCACTCCAGGCTCTCCCTTTACCCTGTAGCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CCA 90 bp | CTTTCAGGCTACAGGGTAAAGGGAGAGCCTGGAGTGCAGGGGAAGTaGTGGCCTTCCCTAGCACAAGAGGATCTTTCAGCATACCCTTGG | + |
Preference number: 1 (lower is better) Translates to: LSGYRVKGEPGVQGK*WPSLAQEDLSAYPW Trigger: CCAAGGGTATGCTGAAAGATCCTCTTGTGCTAGGGAAGGCCACCACTTCCCCTGCACTCCAGGCTCTCCCTTTACCCTGTAGCCTGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CCA 90 bp | TCATGTGCAAGCAAGGCACAGCTGCCTATAACAGGTGGAAGGGAATaGCTGGGTATTCAGGGGAGGGTTTCTCTGACCCTCCCCACCTGT | + |
Preference number: 1 (lower is better) Translates to: SCASKAQLPITGGRE*LGIQGRVSLTLPTC Trigger: ACAGGTGGGGAGGGTCAGAGAAACCCTCCCCTGAATACCCAGCCATTCCCTTCCACCTGTTATAGGCAGCTGTGCCTTGCTTGCACATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR TCA 90 bp | TGTGTTTCTGGATGGAAGGAGTTGAACGAGAAGTTGAGCATAGGCTaGCCCACGTGGGAGATGTGCACCTCCTCCAGGTACTGGAAGGGC | + |
Preference number: 1 (lower is better) Translates to: CVSGWKELNEKLSIG*PTWEMCTSSRYWKG Trigger: GCCCTTCCAGTACCTGGAGGAGGTGCACATCTCCCACGTGGGTCAGCCTATGCTCAACTTCTCGTTCAACTCCTTCCATCCAGAAACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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3UTR GCA 90 bp | GTAAGGAGTTGCTTTTCAGGGTGGGTGCTCCACTGCACCACCCACTaGACTTGGAAAGCAGACATGAAAGGGGCCTTTCCCATAGCACAC | + |
Preference number: 1 (lower is better) Translates to: VRSCFSGWVLHCTTH*TWKADMKGAFPIAH Trigger: GTGTGCTATGGGAAAGGCCCCTTTCATGTCTGCTTTCCAAGTGCAGTGGGTGGTGCAGTGGAGCACCCACCCTGAAAAGCAACTCCTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR GCA 90 bp | TACCGTGCACAGGTAAGGAGTTGCTTTTCAGGGTGGGTGCTCCACTaGACCACCCACTGCACTTGGAAAGCAGACATGAAAGGGGCCTTT | + |
Preference number: 1 (lower is better) Translates to: YRAQVRSCFSGWVLH*TTHCTWKADMKGAF Trigger: AAAGGCCCCTTTCATGTCTGCTTTCCAAGTGCAGTGGGTGGTGCAGTGGAGCACCCACCCTGAAAAGCAACTCCTTACCTGTGCACGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CCA 90 bp | GCAGAATTAGGTACAGCTTTCAGGCTACAGGGTAAAGGGAGAGCCTaGAGTGCAGGGGAAGTGGTGGCCTTCCCTAGCACAAGAGGATCT | + |
Preference number: 1 (lower is better) Translates to: AELGTAFRLQGKGRA*SAGEVVAFPSTRGS Trigger: AGATCCTCTTGTGCTAGGGAAGGCCACCACTTCCCCTGCACTCCAGGCTCTCCCTTTACCCTGTAGCCTGAAAGCTGTACCTAATTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CCA 90 bp | CTCCAGAAAGATCTAGGGCTCTGGAACCTGGGTAGACTGGAGTCTTaGACAGGCAGCCTTACCAGGTTCACAGGTCTAGGGGATAGTCTG | + |
Preference number: 1 (lower is better) Translates to: LQKDLGLWNLGRLES*TGSLTRFTGLGDSL Trigger: CAGACTATCCCCTAGACCTGTGAACCTGGTAAGGCTGCCTGTCCAAGACTCCAGTCTACCCAGGTTCCAGAGCCCTAGATCTTTCTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CCA 90 bp | CTTCCAGAGGTCATGTGCAAGCAAGGCACAGCTGCCTATAACAGGTaGAAGGGAATGGCTGGGTATTCAGGGGAGGGTTTCTCTGACCCT | + |
Preference number: 1 (lower is better) Translates to: LPEVMCKQGTAAYNR*KGMAGYSGEGFSDP Trigger: AGGGTCAGAGAAACCCTCCCCTGAATACCCAGCCATTCCCTTCCACCTGTTATAGGCAGCTGTGCCTTGCTTGCACATGACCTCTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR TCA 90 bp | CATTACAAGAACACCTGGACAACACTTCAGTGTCAGCAGAGCCTGTaGCCACACCATGTCTACCAAACAGGCTCTGGGAGTGGCTCCAGG | + |
Preference number: 1 (lower is better) Translates to: HYKNTWTTLQCQQSL*PHHVYQTGSGSGSR Trigger: CCTGGAGCCACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGTGTTGTCCAGGTGTTCTTGTAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000112905.4 ENSMUST00000187445.2 ENSMUST00000189728.7 ENSMUST00000190116.7 |
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3UTR GCA 90 bp | GTCAATGTCTTTATTGGGCTTTCTTACCGTGCACAGGTAAGGAGTTaGTTTTCAGGGTGGGTGCTCCACTGCACCACCCACTGCACTTGG | + |
Preference number: 1 (lower is better) Translates to: VNVFIGLSYRAQVRS*FSGWVLHCTTHCTW Trigger: CCAAGTGCAGTGGGTGGTGCAGTGGAGCACCCACCCTGAAAAGCAACTCCTTACCTGTGCACGGTAAGAAAGCCCAATAAAGACATTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CCA 90 bp | GAGGCGGATGAAGCCACACTCTCTGTGCATTGGCTTGTGTGTTTCTaGATGGAAGGAGTTGAACGAGAAGTTGAGCATAGGCTGACCCAC | + |
Preference number: 1 (lower is better) Translates to: EADEATLSVHWLVCF*MEGVEREVEHRLTH Trigger: GTGGGTCAGCCTATGCTCAACTTCTCGTTCAACTCCTTCCATCCAGAAACACACAAGCCAATGCACAGAGAGTGTGGCTTCATCCGCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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3UTR CCA 90 bp | CTGGTGGGGCTAATGCTCAGAGTCCTGGCTTCCAACTCCAGTACTTaGGGAAGAAGAAAAGGAGGTTGTACGCTTCAGCAAACATGCTGG | + |
Preference number: 1 (lower is better) Translates to: LVGLMLRVLASNSST*GRRKGGCTLQQTCW Trigger: CCAGCATGTTTGCTGAAGCGTACAACCTCCTTTTCTTCTTCCCCAAGTACTGGAGTTGGAAGCCAGGACTCTGAGCATTAGCCCCACCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CCA 90 bp | CAATCAGAAGGAACAGAGAACGAGACAGCCATGTGGCTGACCTTATaGTCACACACAGGACTTCCAGGGAGAAGGCTGACAGAAGGCAAG | + |
Preference number: 1 (lower is better) Translates to: QSEGTENETAMWLTL*SHTGLPGRRLTEGK Trigger: CTTGCCTTCTGTCAGCCTTCTCCCTGGAAGTCCTGTGTGTGACCATAAGGTCAGCCACATGGCTGTCTCGTTCTCTGTTCCTTCTGATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR TCA 90 bp | ACTTGGAAAGCAGACATGAAAGGGGCCTTTCCCATAGCACACAGATaGAGCTCAACTCTTCGAGTCTCCCCCAGACTAGACACTGTAGCC | + |
Preference number: 1 (lower is better) Translates to: TWKADMKGAFPIAHR*SSTLRVSPRLDTVA Trigger: GGCTACAGTGTCTAGTCTGGGGGAGACTCGAAGAGTTGAGCTTCATCTGTGTGCTATGGGAAAGGCCCCTTTCATGTCTGCTTTCCAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CCA 90 bp | TCTGCCTCCCAAGGGCTGGGATTAAAGGCGTGTGCCACCACCGCCTaGCTCTTCCTCTATATTTTTAAATGTATATGGCAGAAGCTAATG | + |
Preference number: 1 (lower is better) Translates to: SASQGLGLKACATTA*LFLYIFKCIWQKLM Trigger: CATTAGCTTCTGCCATATACATTTAAAAATATAGAGGAAGAGCCAGGCGGTGGTGGCACACGCCTTTAATCCCAGCCCTTGGGAGGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CCA 90 bp | TTAAGGGGTCACCTTCTTGTAGGTAATGTGAAGATGTTGAGTCATTaGCTGTGTAGTGGTTGCCATAGAGACCGTCTGTTCAAGTTTGCC | + |
Preference number: 1 (lower is better) Translates to: LRGHLLVGNVKMLSH*LCSGCHRDRLFKFA Trigger: GGCAAACTTGAACAGACGGTCTCTATGGCAACCACTACACAGCCAATGACTCAACATCTTCACATTACCTACAAGAAGGTGACCCCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000187445.2 |
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3UTR GCA 90 bp | AGAATTCAGCCTGAATTTCCGAGTGATAGATGTCCTGACTCCGCATaGTCAGGTAACAGGTCACATCCTCAAATACAAACATTAACAACC | + |
Preference number: 1 (lower is better) Translates to: RIQPEFPSDRCPDSA*SGNRSHPQIQTLTT Trigger: GGTTGTTAATGTTTGTATTTGAGGATGTGACCTGTTACCTGAGCATGCGGAGTCAGGACATCTATCACTCGGAAATTCAGGCTGAATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187445.2 |
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3UTR CCA 90 bp | ACATCCTCAAATACAAACATTAACAACCAAGATACACAGCATGTCTaGAGGAATCAGCACCCCACTGTAGTCTTTCATGAGAAAAGCAAT | + |
Preference number: 1 (lower is better) Translates to: TSSNTNINNQDTQHV*RNQHPTVVFHEKSN Trigger: ATTGCTTTTCTCATGAAAGACTACAGTGGGGTGCTGATTCCTCCAGACATGCTGTGTATCTTGGTTGTTAATGTTTGTATTTGAGGATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187445.2 |
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3UTR-3UTR CCA 90 bp | GCTAGGAAAGGGCGAATGGGAGGAGTGAGGAGCGCTGTCTGCTGGGTGATGCTTGGTAAAGGGAGAGCCTaGAGTGCAGGGGAAGTGGTG | + |
Preference number: 2 (lower is better) Translates to: ARKGRMGGVRSAVCWVMLGKGRA*SAGEVV Trigger: CACCACTTCCCCTGCACTCCAGGCTCTCCCTTTACC...AAGCATCACCCAGCAGACAGCGCTCCTCACTCCTCCCATTCGCCCTTTCCTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR CCA 90 bp | GCTAGGAAAGGGCGAATGGGAGGAGTGAGGAGCGCTGTCTGCTGGGTGATGCTTAGCCTGTCAGCTGCGTaGCTCAGGTGGTCAACTCTG | + |
Preference number: 2 (lower is better) Translates to: ARKGRMGGVRSAVCWVMLSLSAA*LRWSTL Trigger: CAGAGTTGACCACCTGAGCCACGCAGCTGACAGGCT...AAGCATCACCCAGCAGACAGCGCTCCTCACTCCTCCCATTCGCCCTTTCCTAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR TCA 90 bp | CACCTGGACAACACTTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAGGAGACGGAATGGGATaGGACACACAGCTCCTGCCC | + |
Preference number: 2 (lower is better) Translates to: HLDNTSVSAEPVTTPCLPGDGMG*DTQLLP Trigger: GGGCAGGAGCTGTGTGTCTCATCCCATTCCGTCTCC...TGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGTGTTGTCCAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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3UTR CAA 90 bp | TTCCCAGGTGTTCCCTCTCGAAGCTTGAGTGGTTTTGCCCAGTATTaGACCCTGTCTCTGCATGCCACACGAGGTTCCCCACACGGGTGT | + |
Preference number: 2 (lower is better) Translates to: FPGVPSRSLSGFAQY*TLSLHATRGSPHGC Trigger: ACACCCGTGTGGGGAACCTCGTGTGGCATGCAGAGACAGGGTCAAATACTGGGCAAAACCACTCAAGCTTCGAGAGGGAACACCTGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR TCA 90 bp | ACACCCAAGGAGAAAGCATTGAGTGAGCCTGTCAGCTGCGTGGCTCAGGTGGTCAACTCTGACAGCGTCTaGGAGAACCCCAGCATGACA | + |
Preference number: 2 (lower is better) Translates to: TPKEKALSEPVSCVAQVVNSDSV*ENPSMT Trigger: TGTCATGCTGGGGTTCTCTCAGACGCTGTCAGAGTT...GACCACCTGAGCCACGCAGCTGACAGGCTCACTCAATGCTTTCTCCTTGGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR TCA 90 bp | GCTGGAATGAATGGCCAGCAAACCCCAGGGATTCTCTGTCTATACCTTCCCAGCCTGCTGGGTGATGCTTaGCATGTCAGGGCACCCACA | + |
Preference number: 2 (lower is better) Translates to: AGMNGQQTPGILCLYLPSLLGDA*HVRAPT Trigger: TGTGGGTGCCCTGACATGTCAAGCATCACCCAGCAG...GCTGGGAAGGTATAGACAGAGAATCCCTGGGGTTTGCTGGCCATTCATTCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR CCA 90 bp | GTGCCACCACCGCCTGGCTCTTCCTCTATATTTTTAAATGTATATGGCAGAAGCGCGGCCTATGGCTGCTaGGGTACCAGCCCAGGGCTC | + |
Preference number: 2 (lower is better) Translates to: VPPPPGSSSIFLNVYGRSAAYGC*GTSPGL Trigger: GAGCCCTGGGCTGGTACCCCAGCAGCCATAGGCCGC...GCTTCTGCCATATACATTTAAAAATATAGAGGAAGAGCCAGGCGGTGGTGGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CAA 90 bp | TCCACTTCCACAATCCCTGTGTTCTGGGCACTGACAAAGGCCACTTaGTTGGTGTCAGGCTTGAGGCGGATGAAGCCACACTCTCTGTGC | + |
Preference number: 2 (lower is better) Translates to: STSTIPVFWALTKAT*LVSGLRRMKPHSLC Trigger: GCACAGAGAGTGTGGCTTCATCCGCCTCAAGCCTGACACCAACAAAGTGGCCTTTGTCAGTGCCCAGAACACAGGGATTGTGGAAGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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3UTR CAA 90 bp | GAGTTGCTTTTCAGGGTGGGTGCTCCACTGCACCACCCACTGCACTaGGAAAGCAGACATGAAAGGGGCCTTTCCCATAGCACACAGATG | + |
Preference number: 2 (lower is better) Translates to: ELLFRVGAPLHHPLH*ESRHERGLSHSTQM Trigger: CATCTGTGTGCTATGGGAAAGGCCCCTTTCATGTCTGCTTTCCAAGTGCAGTGGGTGGTGCAGTGGAGCACCCACCCTGAAAAGCAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR TCA 90 bp | ATCCCTGTGTTCTGGGCACTGACAAAGGCCACTTTGTTGGTGTCAGGCTTGAGGAAGTTGAGCATAGGCTaGCCCACGTGGGAGATGTGC | + |
Preference number: 2 (lower is better) Translates to: IPVFWALTKATLLVSGLRKLSIG*PTWEMC Trigger: GCACATCTCCCACGTGGGTCAGCCTATGCTCAACTT...CCTCAAGCCTGACACCAACAAAGTGGCCTTTGTCAGTGCCCAGAACACAGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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3UTR-3UTR TCA 90 bp | GAATGGCCAGCAAACCCCAGGGATTCTCTGTCTATACCTTCCCAGCACCAGAGCAGACCAAGCTGGCCTTaGACTCAGAGATCCACCTGT | + |
Preference number: 2 (lower is better) Translates to: EWPANPRDSLSIPSQHQSRPSWP*TQRSTC Trigger: ACAGGTGGATCTCTGAGTTCAAGGCCAGCTTGGTCT...GCTCTGGTGCTGGGAAGGTATAGACAGAGAATCCCTGGGGTTTGCTGGCCATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR GCA 90 bp | CCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGGCTCCAGGTTAAGAGGTACTGGAAGGGCTaGAGTGTCGGAAAGGTACCA | + |
Preference number: 2 (lower is better) Translates to: PVTTPCLPNRLWEWLQVKRYWKG*SVGKVP Trigger: TGGTACCTTTCCGACACTGCAGCCCTTCCAGTACCT...CTTAACCTGGAGCCACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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3UTR-3UTR CCA 90 bp | CCCCAGGGATTCTCTGTCTATACCTTCCCAGCACCAGAGCTGTGGACTAGTGCTTCTGATGCCAGTACTTaGGAGGCTGAGGTAGGAGGA | + |
Preference number: 2 (lower is better) Translates to: PQGFSVYTFPAPELWTSASDAST*EAEVGG Trigger: TCCTCCTACCTCAGCCTCCCAAGTACTGGCATCAGA...AGCACTAGTCCACAGCTCTGGTGCTGGGAAGGTATAGACAGAGAATCCCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CAA 90 bp | GAAGTGGTGGCCTTCCCTAGCACAAGAGGATCTTTCAGCATACCCTaGGCAGCAGAGCTGACTCTGGACACAGTCTTCATGATCAAGCGG | + |
Preference number: 2 (lower is better) Translates to: EVVAFPSTRGSFSIP*AAELTLDTVFMIKR Trigger: CCGCTTGATCATGAAGACTGTGTCCAGAGTCAGCTCTGCTGCCAAGGGTATGCTGAAAGATCCTCTTGTGCTAGGGAAGGCCACCACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR TCA 90 bp | ACTTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGCTGTGTTCTGGGCACTaGCAAAGGCCACTTTGTTGG | + |
Preference number: 2 (lower is better) Translates to: TSVSAEPVTTPCLPNRLWLCSGH*QRPLCW Trigger: CCAACAAAGTGGCCTTTGTCAGTGCCCAGAACACAG...CCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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3UTR-3UTR TCA 90 bp | GAATTAGGTACAGCTTTCAGGCTACAGGGTAAAGGGAGAGCCTGGAGTGCAGGGTGTCAGCAGAGCCTGTaGCCACACCATGTCTACCAA | + |
Preference number: 2 (lower is better) Translates to: ELGTAFRLQGKGRAWSAGCQQSL*PHHVYQ Trigger: TTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACA...CCCTGCACTCCAGGCTCTCCCTTTACCCTGTAGCCTGAAAGCTGTACCTAATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR GCA 90 bp | TCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGGCTGTGTAGTGGTTaGCATAGAGACCGTCTGTTC | + |
Preference number: 2 (lower is better) Translates to: SVSAEPVTTPCLPNRLWEWLCSG*HRDRLF Trigger: GAACAGACGGTCTCTATGGCAACCACTACACAGCCA...CTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000187445.2 |
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3UTR-3UTR GCA 90 bp | GCTAGGAAAGGGCGAATGGGAGGAGTGAGGAGCGCTGTCTGCTGGGTGATGCTTACTCAGTATAGTCTTTaGCTAGCATGGGTTGGATCC | + |
Preference number: 2 (lower is better) Translates to: ARKGRMGGVRSAVCWVMLTQYSL*LAWVGS Trigger: GGATCCAACCCATGCTAGGCAAAGACTATACTGAGT...AAGCATCACCCAGCAGACAGCGCTCCTCACTCCTCCCATTCGCCCTTTCCTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR CCA 90 bp | TCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGGATACACAGCATGTCTaGAGGAATCAGCACCCCACT | + |
Preference number: 2 (lower is better) Translates to: SVSAEPVTTPCLPNRLWEDTQHV*RNQHPT Trigger: AGTGGGGTGCTGATTCCTCCAGACATGCTGTGTATC...CTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187445.2 |
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3UTR-3UTR TCA 90 bp | GAATGGCCAGCAAACCCCAGGGATTCTCTGTCTATACCTTCCCAGCACCAGAGCCTTCAAGATGGCAGTTaGATGGCTTGGGGAAATAGC | + |
Preference number: 2 (lower is better) Translates to: EWPANPRDSLSIPSQHQSLQDGS*MAWGNS Trigger: GCTATTTCCCCAAGCCATTCAACTGCCATCTTGAAG...GCTCTGGTGCTGGGAAGGTATAGACAGAGAATCCCTGGGGTTTGCTGGCCATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR GCA 90 bp | CCCCAGGGATTCTCTGTCTATACCTTCCCAGCACCAGAGCTGTGGACTAGTGCTCTCAAGAGATCCACTTaGCTCTGTCTCCCAAGTACT | + |
Preference number: 2 (lower is better) Translates to: PQGFSVYTFPAPELWTSALKRST*LCLPST Trigger: AGTACTTGGGAGACAGAGGCAAGTGGATCTCTTGAG...AGCACTAGTCCACAGCTCTGGTGCTGGGAAGGTATAGACAGAGAATCCCTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CAA 90 bp | AGTCAATGTCTTTATTGGGCTTTCTTACCGTGCACAGGTAAGGAGTaGCTTTTCAGGGTGGGTGCTCCACTGCACCACCCACTGCACTTG | + |
Preference number: 2 (lower is better) Translates to: SQCLYWAFLPCTGKE*LFRVGAPLHHPLHL Trigger: CAAGTGCAGTGGGTGGTGCAGTGGAGCACCCACCCTGAAAAGCAACTCCTTACCTGTGCACGGTAAGAAAGCCCAATAAAGACATTGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR TCA 90 bp | GAGACAGCCATGTGGCTGACCTTATGGTCACACACAGGACTTCCAGGGAGAAGGCACACGGGTGTATTATaGAAAAAGCTTTCCAGGCCT | + |
Preference number: 2 (lower is better) Translates to: ETAMWLTLWSHTGLPGRRHTGVL*KKLSRP Trigger: AGGCCTGGAAAGCTTTTTTCATAATACACCCGTGTG...CCTTCTCCCTGGAAGTCCTGTGTGTGACCATAAGGTCAGCCACATGGCTGTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR GCA 90 bp | ATAGAGACCGTCTGTTCAAGTTTGCCTTCAGAATTCAGCCTGAATTTCCGAGTGCCCACGTGGGAGATGTaGACCTCCTCCAGGTACTGG | + |
Preference number: 2 (lower is better) Translates to: IETVCSSLPSEFSLNFRVPTWEM*TSSRYW Trigger: CCAGTACCTGGAGGAGGTGCACATCTCCCACGTGGG...CACTCGGAAATTCAGGCTGAATTCTGAAGGCAAACTTGAACAGACGGTCTCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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3UTR-3UTR GCA 90 bp | TCAAGAGATCCACTTGCCTCTGTCTCCCAAGTACTGGGATTAAAGGTATGCGCCGCACAGGTAAGGAGTTaGTTTTCAGGGTGGGTGCTC | + |
Preference number: 2 (lower is better) Translates to: SRDPLASVSQVLGLKVCAAQVRS*FSGWVL Trigger: GAGCACCCACCCTGAAAAGCAACTCCTTACCTGTGC...GGCGCATACCTTTAATCCCAGTACTTGGGAGACAGAGGCAAGTGGATCTCTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
||
3UTR-3UTR CCA 90 bp | GCTGGAATGAATGGCCAGCAAACCCCAGGGATTCTCTGTCTATACCTTCCCAGCTATAACACAAGCGCTTaGGAAGAAGAGGCAGGAGGA | + |
Preference number: 2 (lower is better) Translates to: AGMNGQQTPGILCLYLPSYNTSA*EEEAGG Trigger: TCCTCCTGCCTCTTCTTCCCAAGCGCTTGTGTTATA...GCTGGGAAGGTATAGACAGAGAATCCCTGGGGTTTGCTGGCCATTCATTCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
||
3UTR CAA 90 bp | GTGTCAGGCTTGAGGCGGATGAAGCCACACTCTCTGTGCATTGGCTaGTGTGTTTCTGGATGGAAGGAGTTGAACGAGAAGTTGAGCATA | + |
Preference number: 2 (lower is better) Translates to: VSGLRRMKPHSLCIG*CVSGWKELNEKLSI Trigger: TATGCTCAACTTCTCGTTCAACTCCTTCCATCCAGAAACACACAAGCCAATGCACAGAGAGTGTGGCTTCATCCGCCTCAAGCCTGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
||
3UTR-3UTR TCA 90 bp | GAGACAGCCATGTGGCTGACCTTATGGTCACACACAGGACTTCCAGGGAGAAGGAAGCTTGGGCTATGTTaGAAAGAAGAAGGAAGGAAG | + |
Preference number: 2 (lower is better) Translates to: ETAMWLTLWSHTGLPGRRKLGLC*KEEGRK Trigger: CTTCCTTCCTTCTTCTTTTCAACATAGCCCAAGCTT...CCTTCTCCCTGGAAGTCCTGTGTGTGACCATAAGGTCAGCCACATGGCTGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
||
3UTR-3UTR TCA 90 bp | GAATGGCCAGCAAACCCCAGGGATTCTCTGTCTATACCTTCCCAGCACCAGAGCGTGAAAAACTGCACCTaGCTAGAATTGCATGGAACT | + |
Preference number: 2 (lower is better) Translates to: EWPANPRDSLSIPSQHQSVKNCT*LELHGT Trigger: AGTTCCATGCAATTCTAGTCAGGTGCAGTTTTTCAC...GCTCTGGTGCTGGGAAGGTATAGACAGAGAATCCCTGGGGTTTGCTGGCCATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
||
3UTR-3UTR GCA 90 bp | TTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAAAGCCACACTCTCTGTaGATTGGCTTGTGTGTTTCT | + |
Preference number: 2 (lower is better) Translates to: FSVSRACDHTMSTKQALGKPHSL*IGLCVS Trigger: AGAAACACACAAGCCAATGCACAGAGAGTGTGGCTT...TCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
||
3UTR-3UTR GCA 90 bp | GAAAGCAGACATGAAAGGGGCCTTTCCCATAGCACACAGATGAAGCTCAACTCTCCTAGGATCTACCAGTaGCTGGAGACTCTCAGACAC | + |
Preference number: 2 (lower is better) Translates to: ESRHERGLSHSTQMKLNSPRIYQ*LETLRH Trigger: GTGTCTGAGAGTCTCCAGGCACTGGTAGATCCTAGG...AGAGTTGAGCTTCATCTGTGTGCTATGGGAAAGGCCCCTTTCATGTCTGCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR CCA 90 bp | CACCTGGACAACACTTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCATGGCTTGTGTGTTTCTaGATGGAAGGAGTTGAACGA | + |
Preference number: 2 (lower is better) Translates to: HLDNTSVSAEPVTTPCLPWLVCF*MEGVER Trigger: TCGTTCAACTCCTTCCATCCAGAAACACACAAGCCA...TGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGTGTTGTCCAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
||
3UTR-3UTR CCA 90 bp | GCTGGAATGAATGGCCAGCAAACCCCAGGGATTCTCTGTCTATACCTTCCCAGCAAAAAGTCAACCTCCTaGAGTGCTTCCGGCAGAATT | + |
Preference number: 2 (lower is better) Translates to: AGMNGQQTPGILCLYLPSKKSTS*SASGRI Trigger: AATTCTGCCGGAAGCACTCCAGGAGGTTGACTTTTT...GCTGGGAAGGTATAGACAGAGAATCCCTGGGGTTTGCTGGCCATTCATTCCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
||
3UTR-3UTR CCA 90 bp | TTAGGAAGCTCTTTTGCAAATAGGCACAGCTTGACTGCTTCAAGATGGCAGTTGGGAACCTGGGTAGACTaGAGTCTTGGACAGGCAGCC | + |
Preference number: 2 (lower is better) Translates to: LGSSFANRHSLTASRWQLGTWVD*SLGQAA Trigger: GGCTGCCTGTCCAAGACTCCAGTCTACCCAGGTTCC...CAACTGCCATCTTGAAGCAGTCAAGCTGTGCCTATTTGCAAAAGAGCTTCCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
||
3UTR CAA 90 bp | GGCTCCAGGTTAAGGGGTCACCTTCTTGTAGGTAATGTGAAGATGTaGAGTCATTGGCTGTGTAGTGGTTGCCATAGAGACCGTCTGTTC | + |
Preference number: 2 (lower is better) Translates to: GSRLRGHLLVGNVKM*SHWLCSGCHRDRLF Trigger: GAACAGACGGTCTCTATGGCAACCACTACACAGCCAATGACTCAACATCTTCACATTACCTACAAGAAGGTGACCCCTTAACCTGGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000187445.2 |
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3UTR-3UTR TCA 90 bp | GGCTATAGTGAACTTAGGCTCCATGAGACCTTGCTTCCAAAACAAAAACCTCCTGGTAGTACAGACCTCTaGTGCCAGTACTTGGGAGGC | + |
Preference number: 2 (lower is better) Translates to: GYSELRLHETLLPKQKPPGSTDL*CQYLGG Trigger: GCCTCCCAAGTACTGGCATCAGAGGTCTGTACTACC...AGGAGGTTTTTGTTTTGGAAGCAAGGTCTCATGGAGCCTAAGTTCACTATAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
||
3UTR-3UTR CCA 90 bp | GGCTATAGTGAACTTAGGCTCCATGAGACCTTGCTTCCAAAACAAAAACCTCCTGGTAGACTGGAGTCTTaGACAGGCAGCCTTACCAGG | + |
Preference number: 2 (lower is better) Translates to: GYSELRLHETLLPKQKPPGRLES*TGSLTR Trigger: CCTGGTAAGGCTGCCTGTCCAAGACTCCAGTCTACC...AGGAGGTTTTTGTTTTGGAAGCAAGGTCTCATGGAGCCTAAGTTCACTATAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR CCA 90 bp | TCAAGAGATCCACTTGCCTCTGTCTCCCAAGTACTGGGATTAAAGGTATGCGCCGTGTTTCCCAGGCTTTaGTCTCTATTATCACCCTCC | + |
Preference number: 2 (lower is better) Translates to: SRDPLASVSQVLGLKVCAVFPRL*SLLSPS Trigger: GGAGGGTGATAATAGAGACCAAAGCCTGGGAAACAC...GGCGCATACCTTTAATCCCAGTACTTGGGAGACAGAGGCAAGTGGATCTCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR GCA 90 bp | GCTGGAATGAATGGCCAGCAAACCCCAGGGATTCTCTGTCTATACCTTCCCAGCTTCAAGGCAGGATTCTaGCAAAATTCACTCTGGTTA | + |
Preference number: 2 (lower is better) Translates to: AGMNGQQTPGILCLYLPSFKAGF*QNSLWL Trigger: TAACCAGAGTGAATTTTGGCAGAATCCTGCCTTGAA...GCTGGGAAGGTATAGACAGAGAATCCCTGGGGTTTGCTGGCCATTCATTCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR CCA 90 bp | TCAAGAGATCCACTTGCCTCTGTCTCCCAAGTACTGGGATTAAAGGTATGCGCCAAGATGGCAGTTGAATaGCTTGGGGAAATAGCCACA | + |
Preference number: 2 (lower is better) Translates to: SRDPLASVSQVLGLKVCAKMAVE*LGEIAT Trigger: TGTGGCTATTTCCCCAAGCCATTCAACTGCCATCTT...GGCGCATACCTTTAATCCCAGTACTTGGGAGACAGAGGCAAGTGGATCTCTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR GCA 90 bp | GAATTAGGTACAGCTTTCAGGCTACAGGGTAAAGGGAGAGCCTGGAGTGCAGGGTTATTTGGTTTTCTATaGCATTACAAGAACACCTGG | + |
Preference number: 2 (lower is better) Translates to: ELGTAFRLQGKGRAWSAGLFGFL*HYKNTW Trigger: CCAGGTGTTCTTGTAATGGCATAGAAAACCAAATAA...CCCTGCACTCCAGGCTCTCCCTTTACCCTGTAGCCTGAAAGCTGTACCTAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR TCA 90 bp | GACCGTCTGTTCAAGTTTGCCTTCAGAATTCAGCCTGAATTTCCGAGTGATAGAGAAAAGCAATGTAGCTaGAGTGCAAGAGAGGACTTC | + |
Preference number: 2 (lower is better) Translates to: DRLFKFAFRIQPEFPSDREKQCS*SAREDF Trigger: GAAGTCCTCTCTTGCACTTCAGCTACATTGCTTTTC...TCTATCACTCGGAAATTCAGGCTGAATTCTGAAGGCAAACTTGAACAGACGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187445.2 |
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3UTR-3UTR TCA 90 bp | TTAGGAAGCTCTTTTGCAAATAGGCACAGCTTGACTGCTTCAAGATGGCAGTTGGGAGGTCTGAGATACTaGCAACTGTTCTATGGTAAT | + |
Preference number: 2 (lower is better) Translates to: LGSSFANRHSLTASRWQLGGLRY*QLFYGN Trigger: ATTACCATAGAACAGTTGTCAGTATCTCAGACCTCC...CAACTGCCATCTTGAAGCAGTCAAGCTGTGCCTATTTGCAAAAGAGCTTCCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR CCA 90 bp | CCTAATTTCTTTCTTGTCGTTTCTTCTTTGAGCATGACAAACTGCAACCAACCTAACGAGACAGCCATGTaGCTGACCTTATGGTCACAC | + |
Preference number: 2 (lower is better) Translates to: PNFFLVVSSLSMTNCNQPNETAM*LTLWSH Trigger: GTGTGACCATAAGGTCAGCCACATGGCTGTCTCGTT...AGGTTGGTTGCAGTTTGTCATGCTCAAAGAAGAAACGACAAGAAAGAAATTAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR CCA 90 bp | TTAGGAAGCTCTTTTGCAAATAGGCACAGCTTGACTGCTTCAAGATGGCAGTTGCAACATAGGGGTATGTaGCCATACAGTTTTTGTGTA | + |
Preference number: 2 (lower is better) Translates to: LGSSFANRHSLTASRWQLQHRGM*PYSFCV Trigger: TACACAAAAACTGTATGGCCACATACCCCTATGTTG...CAACTGCCATCTTGAAGCAGTCAAGCTGTGCCTATTTGCAAAAGAGCTTCCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR TCA 72 bp | CTGCAGTGTCGGAAAGGTACCAACTCCTGGCGGGTCTaGCAGCCAGGTACCCAGCATCCAGGACAACGGCTC | + |
Preference number: 3 (lower is better) Translates to: LQCRKGTNSWRV*QPGTQHPGQRL Trigger: GAGCCGTTGTCCTGGATGCTGGGTACCTGGCTGTCAGACCCGCCAGGAGTTGGTACCTTTCCGACACTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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3UTR TCA 72 bp | GGGAGGAGTGAGGAGCGCTGTCTGCTGGGTGATGCTTaGCATGTCAGGGCACCCACACAGCACAGCTCACAC | + |
Preference number: 3 (lower is better) Translates to: GRSEERCLLGDA*HVRAPTQHSSH Trigger: GTGTGAGCTGTGCTGTGTGGGTGCCCTGACATGTCAAGCATCACCCAGCAGACAGCGCTCCTCACTCCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR TCA 72 bp | GTGGAGGGCTTGTCAAGCACCGGGAAGCTCTGGGGCTaGTCCTCAGCGCTGCGTAAGATCAGGCTTGGTGCA | + |
Preference number: 3 (lower is better) Translates to: VEGLSSTGKLWG*SSALRKIRLGA Trigger: TGCACCAAGCCTGATCTTACGCAGCGCTGAGGATCAGCCCCAGAGCTTCCCGGTGCTTGACAAGCCCTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR GCA 72 bp | TGGGAGATGTGCACCTCCTCCAGGTACTGGAAGGGCTaGAGTGTCGGAAAGGTACCAACTCCTGGCGGGTCT | + |
Preference number: 3 (lower is better) Translates to: WEMCTSSRYWKG*SVGKVPTPGGS Trigger: AGACCCGCCAGGAGTTGGTACCTTTCCGACACTGCAGCCCTTCCAGTACCTGGAGGAGGTGCACATCTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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3UTR GCA 72 bp | AGGAAAGGGCGAATGGGAGGAGTGAGGAGCGCTGTCTaGTGGGTGATGCTTGACATGTCAGGGCACCCACAC | + |
Preference number: 3 (lower is better) Translates to: RKGRMGGVRSAV*WVMLDMSGHPH Trigger: GTGTGGGTGCCCTGACATGTCAAGCATCACCCAGCAGACAGCGCTCCTCACTCCTCCCATTCGCCCTTTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CCA 72 bp | AAAGGGCGAATGGGAGGAGTGAGGAGCGCTGTCTGCTaGGTGATGCTTGACATGTCAGGGCACCCACACAGC | + |
Preference number: 3 (lower is better) Translates to: KGRMGGVRSAVC*VMLDMSGHPHS Trigger: GCTGTGTGGGTGCCCTGACATGTCAAGCATCACCCAGCAGACAGCGCTCCTCACTCCTCCCATTCGCCCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR CAA 90 bp | GTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGGCTCCAGGTTAAGGGGTCCACATGGGGCTCCTaGGCAAAGGAGATCCTGGAG | + |
Preference number: 3 (lower is better) Translates to: VTTPCLPNRLWEWLQVKGSTWGS*AKEILE Trigger: CTCCAGGATCTCCTTTGCCAAGGAGCCCCATGTGGA...CCCCTTAACCTGGAGCCACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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3UTR TCA 72 bp | CCCACACAGCACAGCTCACACCCAAGGAGAAAGCATTaGGTGAGCCTGTCAGCTGCGTGGCTCAGGTGGTCA | + |
Preference number: 3 (lower is better) Translates to: PTQHSSHPRRKH*VSLSAAWLRWS Trigger: TGACCACCTGAGCCACGCAGCTGACAGGCTCACTCAATGCTTTCTCCTTGGGTGTGAGCTGTGCTGTGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CCA 72 bp | GGTACAGCTTTCAGGCTACAGGGTAAAGGGAGAGCCTaGAGTGCAGGGGAAGTGGTGGCCTTCCCTAGCACA | + |
Preference number: 3 (lower is better) Translates to: GTAFRLQGKGRA*SAGEVVAFPST Trigger: TGTGCTAGGGAAGGCCACCACTTCCCCTGCACTCCAGGCTCTCCCTTTACCCTGTAGCCTGAAAGCTGTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR GCA 72 bp | TGCTTTTCAGGGTGGGTGCTCCACTGCACCACCCACTaGACTTGGAAAGCAGACATGAAAGGGGCCTTTCCC | + |
Preference number: 3 (lower is better) Translates to: CFSGWVLHCTTH*TWKADMKGAFP Trigger: GGGAAAGGCCCCTTTCATGTCTGCTTTCCAAGTGCAGTGGGTGGTGCAGTGGAGCACCCACCCTGAAAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CCA 72 bp | GATCTAGGGCTCTGGAACCTGGGTAGACTGGAGTCTTaGACAGGCAGCCTTACCAGGTTCACAGGTCTAGGG | + |
Preference number: 3 (lower is better) Translates to: DLGLWNLGRLES*TGSLTRFTGLG Trigger: CCCTAGACCTGTGAACCTGGTAAGGCTGCCTGTCCAAGACTCCAGTCTACCCAGGTTCCAGAGCCCTAGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR TCA 72 bp | GGATGGAAGGAGTTGAACGAGAAGTTGAGCATAGGCTaGCCCACGTGGGAGATGTGCACCTCCTCCAGGTAC | + |
Preference number: 3 (lower is better) Translates to: GWKELNEKLSIG*PTWEMCTSSRY Trigger: GTACCTGGAGGAGGTGCACATCTCCCACGTGGGTCAGCCTATGCTCAACTTCTCGTTCAACTCCTTCCATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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3UTR TCA 72 bp | ACCTCCTGGCTTTTGTTCATGGAAAGGGCCGGAAGTTaGGCAGTCCACACGGAGAACCTGTGTTTCCCAGGC | + |
Preference number: 3 (lower is better) Translates to: TSWLLFMERAGS*AVHTENLCFPG Trigger: GCCTGGGAAACACAGGTTCTCCGTGTGGACTGCTCAACTTCCGGCCCTTTCCATGAACAAAAGCCAGGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CCA 72 bp | TGGGGCTCCTTGGCAAAGGAGATCCTGGAGACGGAATaGGATGAGACACACAGCTCCTGCCCATTCACTTCA | + |
Preference number: 3 (lower is better) Translates to: WGSLAKEILETE*DETHSSCPFTS Trigger: TGAAGTGAATGGGCAGGAGCTGTGTGTCTCATCCCATTCCGTCTCCAGGATCTCCTTTGCCAAGGAGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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3UTR CCA 72 bp | AGCAAGGCACAGCTGCCTATAACAGGTGGAAGGGAATaGCTGGGTATTCAGGGGAGGGTTTCTCTGACCCTC | + |
Preference number: 3 (lower is better) Translates to: SKAQLPITGGRE*LGIQGRVSLTL Trigger: GAGGGTCAGAGAAACCCTCCCCTGAATACCCAGCCATTCCCTTCCACCTGTTATAGGCAGCTGTGCCTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR CAA 90 bp | GAGACAGCCATGTGGCTGACCTTATGGTCACACACAGGACTTCCAGGGAGAAGGGGTTTTGCCCAGTATTaGACCCTGTCTCTGCATGCC | + |
Preference number: 3 (lower is better) Translates to: ETAMWLTLWSHTGLPGRRGFAQY*TLSLHA Trigger: GGCATGCAGAGACAGGGTCAAATACTGGGCAAAACC...CCTTCTCCCTGGAAGTCCTGTGTGTGACCATAAGGTCAGCCACATGGCTGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CCA 72 bp | ACTTCACCCTCCTCCACTTCCACAATCCCTGTGTTCTaGGCACTGACAAAGGCCACTTTGTTGGTGTCAGGC | + |
Preference number: 3 (lower is better) Translates to: TSPSSTSTIPVF*ALTKATLLVSG Trigger: GCCTGACACCAACAAAGTGGCCTTTGTCAGTGCCCAGAACACAGGGATTGTGGAAGTGGAGGAGGGTGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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3UTR CCA 72 bp | TCTTACCGTGCACAGGTAAGGAGTTGCTTTTCAGGGTaGGTGCTCCACTGCACCACCCACTGCACTTGGAAA | + |
Preference number: 3 (lower is better) Translates to: SYRAQVRSCFSG*VLHCTTHCTWK Trigger: TTTCCAAGTGCAGTGGGTGGTGCAGTGGAGCACCCACCCTGAAAAGCAACTCCTTACCTGTGCACGGTAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR TCA 72 bp | AACACCTGGACAACACTTCAGTGTCAGCAGAGCCTGTaGCCACACCATGTCTACCAAACAGGCTCTGGGAGT | + |
Preference number: 3 (lower is better) Translates to: NTWTTLQCQQSL*PHHVYQTGSGS Trigger: ACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGTGTTGTCCAGGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000112905.4 ENSMUST00000187445.2 ENSMUST00000189728.7 ENSMUST00000190116.7 |
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3UTR TCA 72 bp | TACCAGCCCAGGGCTCTCCTCGGAGGTCTGAGATACTaGCAACTGTTCTATGGTAATGGTTCCTGTTCCCAG | + |
Preference number: 3 (lower is better) Translates to: YQPRALLGGLRY*QLFYGNGSCSQ Trigger: CTGGGAACAGGAACCATTACCATAGAACAGTTGTCAGTATCTCAGACCTCCGAGGAGAGCCCTGGGCTGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR GCA 72 bp | CTTGCCTCTGTCTCCCAAGTACTGGGATTAAAGGTATaGGCCACCACTGCCCGGCAAGGCTGTAGCATTTAT | + |
Preference number: 3 (lower is better) Translates to: LASVSQVLGLKV*ATTARQGCSIY Trigger: ATAAATGCTACAGCCTTGCCGGGCAGTGGTGGCGCATACCTTTAATCCCAGTACTTGGGAGACAGAGGCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CCA 72 bp | CCCTGGCTGTCTTGGAACTTACTCTGTAGACCAGGCTaGCCTCAAACTCAAGAGATCCACTTGCCTCTGTCT | + |
Preference number: 3 (lower is better) Translates to: PWLSWNLLCRPG*PQTQEIHLPLS Trigger: AGACAGAGGCAAGTGGATCTCTTGAGTTTGAGGCCAGCCTGGTCTACAGAGTAAGTTCCAAGACAGCCAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR CAA 90 bp | GGCTGTGTAGTGGTTGCCATAGAGACCGTCTGTTCAAGTTTGCCTTCAGAATTCTTGTTGGTGTCAGGCTaGAGGCGGATGAAGCCACAC | + |
Preference number: 3 (lower is better) Translates to: GCVVVAIETVCSSLPSEFLLVSG*RRMKPH Trigger: GTGTGGCTTCATCCGCCTCAAGCCTGACACCAACAA...GAATTCTGAAGGCAAACTTGAACAGACGGTCTCTATGGCAACCACTACACAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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3UTR-3UTR CAA 90 bp | GCTGGAATGAATGGCCAGCAAACCCCAGGGATTCTCTGTCTATACCTTCCCAGCGTGGCCATACAGTTTTaGTGTAGGTGTTCAAGGCTG | + |
Preference number: 3 (lower is better) Translates to: AGMNGQQTPGILCLYLPSVAIQF*CRCSRL Trigger: CAGCCTTGAACACCTACACAAAAACTGTATGGCCAC...GCTGGGAAGGTATAGACAGAGAATCCCTGGGGTTTGCTGGCCATTCATTCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR TCA 72 bp | TGCATGCCACACGAGGTTCCCCACACGGGTGTATTATaGAAAAAGCTTTCCAGGCCTGGTAGTACAGACCTC | + |
Preference number: 3 (lower is better) Translates to: CMPHEVPHTGVL*KKLSRPGSTDL Trigger: GAGGTCTGTACTACCAGGCCTGGAAAGCTTTTTTCATAATACACCCGTGTGGGGAACCTCGTGTGGCATGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR TCA 72 bp | TGGTCAACTCTGACAGCGTCTGAGAGAACCCCAGCATaGCAATCAGAAGGAACAGAGAACGAGACAGCCATG | + |
Preference number: 3 (lower is better) Translates to: WSTLTASERTPA*QSEGTENETAM Trigger: CATGGCTGTCTCGTTCTCTGTTCCTTCTGATTGTCATGCTGGGGTTCTCTCAGACGCTGTCAGAGTTGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR-3UTR CAA 90 bp | ATCCCTGTGTTCTGGGCACTGACAAAGGCCACTTTGTTGGTGTCAGGCTTGAGGTCTGGATGGAAGGAGTaGAACGAGAAGTTGAGCATA | + |
Preference number: 3 (lower is better) Translates to: IPVFWALTKATLLVSGLRSGWKE*NEKLSI Trigger: TATGCTCAACTTCTCGTTCAACTCCTTCCATCCAGA...CCTCAAGCCTGACACCAACAAAGTGGCCTTTGTCAGTGCCCAGAACACAGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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3UTR-3UTR CAA 90 bp | AACACTTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCCACACTCTCTGTGCATaGGCTTGTGTGTTTCTGGAT | + |
Preference number: 3 (lower is better) Translates to: NTSVSAEPVTTPCLPNRLHTLCA*ACVFLD Trigger: ATCCAGAAACACACAAGCCAATGCACAGAGAGTGTG...GAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
||
3UTR-3UTR CAA 90 bp | TCAAGAGATCCACTTGCCTCTGTCTCCCAAGTACTGGGATTAAAGGTATGCGCCAAAACCTCCTGGCTTTaGTTCATGGAAAGGGCCGGA | + |
Preference number: 3 (lower is better) Translates to: SRDPLASVSQVLGLKVCAKTSWL*FMERAG Trigger: TCCGGCCCTTTCCATGAACAAAAGCCAGGAGGTTTT...GGCGCATACCTTTAATCCCAGTACTTGGGAGACAGAGGCAAGTGGATCTCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
||
3UTR TCA 72 bp | AATCAGAAGGAACAGAGAACGAGACAGCCATGTGGCTaGCCTTATGGTCACACACAGGACTTCCAGGGAGAA | + |
Preference number: 3 (lower is better) Translates to: NQKEQRTRQPCG*PYGHTQDFQGE Trigger: TTCTCCCTGGAAGTCCTGTGTGTGACCATAAGGTCAGCCACATGGCTGTCTCGTTCTCTGTTCCTTCTGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
||
3UTR GCA 72 bp | GTAGACCAGGCTGGCCTCAAACTCAAGAGATCCACTTaGCTCTGTCTCCCAAGTACTGGGATTAAAGGTATG | + |
Preference number: 3 (lower is better) Translates to: VDQAGLKLKRST*LCLPSTGIKGM Trigger: CATACCTTTAATCCCAGTACTTGGGAGACAGAGGCAAGTGGATCTCTTGAGTTTGAGGCCAGCCTGGTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
||
3UTR CCA 72 bp | GAGGGTTTCTCTGACCCTCCCCACCTGTCCAATGAGTaGGGAATATATAGGCAACAAGTTCAGTTAGGAAGC | + |
Preference number: 3 (lower is better) Translates to: EGFSDPPHLSNE*GIYRQQVQLGS Trigger: GCTTCCTAACTGAACTTGTTGCCTATATATTCCCCACTCATTGGACAGGTGGGGAGGGTCAGAGAAACCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
||
3UTR CCA 72 bp | GAAGCCACACTCTCTGTGCATTGGCTTGTGTGTTTCTaGATGGAAGGAGTTGAACGAGAAGTTGAGCATAGG | + |
Preference number: 3 (lower is better) Translates to: EATLSVHWLVCF*MEGVEREVEHR Trigger: CCTATGCTCAACTTCTCGTTCAACTCCTTCCATCCAGAAACACACAAGCCAATGCACAGAGAGTGTGGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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3UTR CCA 72 bp | CTAATGCTCAGAGTCCTGGCTTCCAACTCCAGTACTTaGGGAAGAAGAAAAGGAGGTTGTACGCTTCAGCAA | + |
Preference number: 3 (lower is better) Translates to: LMLRVLASNSST*GRRKGGCTLQQ Trigger: TTGCTGAAGCGTACAACCTCCTTTTCTTCTTCCCCAAGTACTGGAGTTGGAAGCCAGGACTCTGAGCATTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
||
3UTR CCA 72 bp | CAAGGGCTGGGATTAAAGGCGTGTGCCACCACCGCCTaGCTCTTCCTCTATATTTTTAAATGTATATGGCAG | + |
Preference number: 3 (lower is better) Translates to: QGLGLKACATTA*LFLYIFKCIWQ Trigger: CTGCCATATACATTTAAAAATATAGAGGAAGAGCCAGGCGGTGGTGGCACACGCCTTTAATCCCAGCCCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
||
3UTR CCA 72 bp | GGATTCTCTGTCTATACCTTCCCAGCACCAGAGCTGTaGACTAGTGCTAAAATTCCTTCACATGGGGAGACA | + |
Preference number: 3 (lower is better) Translates to: GFSVYTFPAPEL*TSAKIPSHGET Trigger: TGTCTCCCCATGTGAAGGAATTTTAGCACTAGTCCACAGCTCTGGTGCTGGGAAGGTATAGACAGAGAATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
||
3UTR-3UTR CAA 90 bp | CACCTGGACAACACTTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAAGTTCAAAGCAAGCTaGGGCTATGTTGAAAAGAAG | + |
Preference number: 3 (lower is better) Translates to: HLDNTSVSAEPVTTPCLPKFKAS*GYVEKK Trigger: CTTCTTTTCAACATAGCCCAAGCTTGCTTTGAACTT...TGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGTGTTGTCCAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
||
3UTR-3UTR CAA 90 bp | GAAAGCAGACATGAAAGGGGCCTTTCCCATAGCACACAGATGAAGCTCAACTCTTTCCAACTCCAGTACTaGGGGAAGAAGAAAAGGAGG | + |
Preference number: 3 (lower is better) Translates to: ESRHERGLSHSTQMKLNSFQLQY*GKKKRR Trigger: CCTCCTTTTCTTCTTCCCCAAGTACTGGAGTTGGAA...AGAGTTGAGCTTCATCTGTGTGCTATGGGAAAGGCCCCTTTCATGTCTGCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
||
3UTR-3UTR CAA 90 bp | CCTAGAACAATTCAAGGCAGGATTCTGCCAAAATTCACTCTGGTTAACTGTAGCTGCACAGGTAAGGAGTaGCTTTTCAGGGTGGGTGCT | + |
Preference number: 3 (lower is better) Translates to: PRTIQGRILPKFTLVNCSCTGKE*LFRVGA Trigger: AGCACCCACCCTGAAAAGCAACTCCTTACCTGTGCA...GCTACAGTTAACCAGAGTGAATTTTGGCAGAATCCTGCCTTGAATTGTTCTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR GCA 72 bp | GTAGGTGCTGGAGGGTGTAGTACTCAGTATAGTCTTTaGCTAGCATGGGTTGGATCCCCAGTATTACAAAAA | + |
Preference number: 3 (lower is better) Translates to: VGAGGCSTQYSL*LAWVGSPVLQK Trigger: TTTTTGTAATACTGGGGATCCAACCCATGCTAGGCAAAGACTATACTGAGTACTACACCCTCCAGCACCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
||
3UTR CCA 72 bp | TCCAGAATTCTCACTACTGCGAGTCAATGTCTTTATTaGGCTTTCTTACCGTGCACAGGTAAGGAGTTGCTT | + |
Preference number: 3 (lower is better) Translates to: SRILTTASQCLY*AFLPCTGKELL Trigger: AAGCAACTCCTTACCTGTGCACGGTAAGAAAGCCCAATAAAGACATTGACTCGCAGTAGTGAGAATTCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CCA 72 bp | AATACAAACATTAACAACCAAGATACACAGCATGTCTaGAGGAATCAGCACCCCACTGTAGTCTTTCATGAG | + |
Preference number: 3 (lower is better) Translates to: NTNINNQDTQHV*RNQHPTVVFHE Trigger: CTCATGAAAGACTACAGTGGGGTGCTGATTCCTCCAGACATGCTGTGTATCTTGGTTGTTAATGTTTGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187445.2 |
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3UTR TCA 72 bp | AGCATGAGGCAAATTATTCAGCTTCTTCGAATAGTCTaGAGCAGCTCCATATCCCCACATCTGGTATTAAAA | + |
Preference number: 3 (lower is better) Translates to: SMRQIIQLLRIV*SSSISPHLVLK Trigger: TTTTAATACCAGATGTGGGGATATGGAGCTGCTTCAGACTATTCGAAGAAGCTGAATAATTTGCCTCATGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR GCA 90 bp | ACCCACGTGGGAGATGTGCACCTCCTCCAGGTACTGGAAGGGCTGCAGTGTCGGCGCGTTTCTCGCCCTTaGCCTGCCTGTTGGAACAGT | + |
Preference number: 4 (lower is better) Translates to: THVGDVHLLQVLEGLQCRRVSRP*PACWNS Trigger: ACTGTTCCAACAGGCAGGGCAAGGGCGAGAAACGCG...CCGACACTGCAGCCCTTCCAGTACCTGGAGGAGGTGCACATCTCCCACGTGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR CCA 90 bp | GTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGGCTCCAGGTTAAGGGGCTGGCTGACAGCACCTaGGGTGACCTTGGGGGCTGC | + |
Preference number: 4 (lower is better) Translates to: VTTPCLPNRLWEWLQVKGLADST*GDLGGC Trigger: GCAGCCCCCAAGGTCACCCCAGGTGCTGTCAGCCAG...CCCCTTAACCTGGAGCCACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR TCA 90 bp | ACCCACGTGGGAGATGTGCACCTCCTCCAGGTACTGGAAGGGCTGCAGTGTCGGAGGGGTTGCTGTAAGTaGGGAACTTGGGGGACTCTG | + |
Preference number: 4 (lower is better) Translates to: THVGDVHLLQVLEGLQCRRGCCK*GTWGTL Trigger: CAGAGTCCCCCAAGTTCCTCACTTACAGCAACCCCT...CCGACACTGCAGCCCTTCCAGTACCTGGAGGAGGTGCACATCTCCCACGTGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR TCA 90 bp | GAGACAGCCATGTGGCTGACCTTATGGTCACACACAGGACTTCCAGGGAGAAGGAGTGCAGGGAGTCGATaGGCTTGCAGGCCCCCGAGG | + |
Preference number: 4 (lower is better) Translates to: ETAMWLTLWSHTGLPGRRSAGSR*ACRPPR Trigger: CCTCGGGGGCCTGCAAGCTCATCGACTCCCTGCACT...CCTTCTCCCTGGAAGTCCTGTGTGTGACCATAAGGTCAGCCACATGGCTGTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR GCA 90 bp | TCGGAAAGGTACCAACTCCTGGCGGGTCTGACAGCCAGGTACCCAGCATCCAGGTGTAGCAGACGCTTGTaGCTCTTCCTGGCCTCTGGC | + |
Preference number: 4 (lower is better) Translates to: SERYQLLAGLTARYPASRCSRRL*LFLASG Trigger: GCCAGAGGCCAGGAAGAGGCACAAGCGTCTGCTACA...CCTGGATGCTGGGTACCTGGCTGTCAGACCCGCCAGGAGTTGGTACCTTTCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR GCA 90 bp | GTACCAACTCCTGGCGGGTCTGACAGCCAGGTACCCAGCATCCAGGACAACGGCACTCTGCACGGCTTCTaGTGCTGGCTTAGGGGTTAC | + |
Preference number: 4 (lower is better) Translates to: VPTPGGSDSQVPSIQDNGTLHGF*CWLRGY Trigger: GTAACCCCTAAGCCAGCAGCAGAAGCCGTGCAGAGT...GCCGTTGTCCTGGATGCTGGGTACCTGGCTGTCAGACCCGCCAGGAGTTGGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR TCA 90 bp | GTGTCAGGCTTGAGGCGGATGAAGCCACACTCTCTGTGCATTGGCTTGTGTGTTAGTGCAGGGAGTCGATaGGCTTGCAGGCCCCCGAGG | + |
Preference number: 4 (lower is better) Translates to: VSGLRRMKPHSLCIGLCVSAGSR*ACRPPR Trigger: CCTCGGGGGCCTGCAAGCTCATCGACTCCCTGCACT...AACACACAAGCCAATGCACAGAGAGTGTGGCTTCATCCGCCTCAAGCCTGACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR TCA 90 bp | TCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGGCTCGGAGACGGAATGGGATaGGACACACAGCTCCTGCCC | + |
Preference number: 4 (lower is better) Translates to: SAEPVTTPCLPNRLWEWLGDGMG*DTQLLP Trigger: GGGCAGGAGCTGTGTGTCTCATCCCATTCCGTCTCC...GAGCCACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000187445.2 ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR GCA 90 bp | GTACCAACTCCTGGCGGGTCTGACAGCCAGGTACCCAGCATCCAGGACAACGGCTTCTTCTTCTCAACCTaGTCCCGCAGGCAGCATACC | + |
Preference number: 4 (lower is better) Translates to: VPTPGGSDSQVPSIQDNGFFFST*SRRQHT Trigger: GGTATGCTGCCTGCGGGAGCAGGTTGAGAAGAAGAA...GCCGTTGTCCTGGATGCTGGGTACCTGGCTGTCAGACCCGCCAGGAGTTGGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR GCA 90 bp | GTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGGCCCACGTGGGAGATGTaGACCTCCTCCAGGTACTGG | + |
Preference number: 4 (lower is better) Translates to: VSAEPVTTPCLPNRLWEWPTWEM*TSSRYW Trigger: CCAGTACCTGGAGGAGGTGCACATCTCCCACGTGGG...CCACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | GCTAGGAAAGGGCGAATGGGAGGAGTGAGGAGCGCTGTCTGCTGGGTGATGCTTGTCTTTCTCCTAGCATaGCCATGTCCTCCAGCCCCC | + |
Preference number: 4 (lower is better) Translates to: ARKGRMGGVRSAVCWVMLVFLLA*PCPPAP Trigger: GGGGGCTGGAGGACATGGCCATGCTAGGAGAAAGAC...AAGCATCACCCAGCAGACAGCGCTCCTCACTCCTCCCATTCGCCCTTTCCTAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | TTGGTGCACACAGCTATAACACAAGCGCTTGGGAAGAAGAGGCAGGAGGACCAGCTGGCTGACAGCACCTaGGGTGACCTTGGGGGCTGC | + |
Preference number: 4 (lower is better) Translates to: LVHTAITQALGKKRQEDQLADST*GDLGGC Trigger: GCAGCCCCCAAGGTCACCCCAGGTGCTGTCAGCCAG...CTGGTCCTCCTGCCTCTTCTTCCCAAGCGCTTGTGTTATAGCTGTGTGCACCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | GTGTCAGGCTTGAGGCGGATGAAGCCACACTCTCTGTGCATTGGCTTGTGTGTTCCTCTTCCTGGCCTCTaGCCAATGGGGCAGCCGGGT | + |
Preference number: 4 (lower is better) Translates to: VSGLRRMKPHSLCIGLCVPLPGL*PMGQPG Trigger: ACCCGGCTGCCCCATTGGCCAGAGGCCAGGAAGAGG...AACACACAAGCCAATGCACAGAGAGTGTGGCTTCATCCGCCTCAAGCCTGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR CCA 90 bp | GAATTAGGTACAGCTTTCAGGCTACAGGGTAAAGGGAGAGCCTGGAGTGCAGGGCCTCTTCCTGGCCTCTaGCCAATGGGGCAGCCGGGT | + |
Preference number: 4 (lower is better) Translates to: ELGTAFRLQGKGRAWSAGPLPGL*PMGQPG Trigger: ACCCGGCTGCCCCATTGGCCAGAGGCCAGGAAGAGG...CCCTGCACTCCAGGCTCTCCCTTTACCCTGTAGCCTGAAAGCTGTACCTAATTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | ACTTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGTGGGAGGCTCGTGGCTaGGGGGCAGCAGGCCACTTA | + |
Preference number: 4 (lower is better) Translates to: TSVSAEPVTTPCLPNRLWWEARG*GAAGHL Trigger: TAAGTGGCCTGCTGCCCCCCAGCCACGAGCCTCCCA...CCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR TCA 90 bp | GGCGGGTCTGACAGCCAGGTACCCAGCATCCAGGACAACGGCTCCACCACTGGACTCACTACAGAGGAATaGATACTTAGTCGGGGTCCA | + |
Preference number: 4 (lower is better) Translates to: GGSDSQVPSIQDNGSTTGLTTEE*ILSRGP Trigger: TGGACCCCGACTAAGTATTCATTCCTCTGTAGTGAG...TCCAGTGGTGGAGCCGTTGTCCTGGATGCTGGGTACCTGGCTGTCAGACCCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR TCA 90 bp | TCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGGGAGACGGAATGGGATaGGACACACAGCTCCTGCCC | + |
Preference number: 4 (lower is better) Translates to: SVSAEPVTTPCLPNRLWEGDGMG*DTQLLP Trigger: GGGCAGGAGCTGTGTGTCTCATCCCATTCCGTCTCC...CTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000187445.2 ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR GCA 90 bp | GCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGGCTCCAGTTCTCGCCCTTGCCCTaGCTGTTGGAACAGTTCACG | + |
Preference number: 4 (lower is better) Translates to: AEPVTTPCLPNRLWEWLQFSPLP*LLEQFT Trigger: CGTGAACTGTTCCAACAGGCAGGGCAAGGGCGAGAA...CTGGAGCCACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | AGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGCGCAGGCAGCATACCTaGCTCTTGTTCTGCCGAGCG | + |
Preference number: 4 (lower is better) Translates to: SVSRACDHTMSTKQALGVRRQHT*LLFCRA Trigger: CGCTCGGCAGAACAAGAGCCAGGTATGCTGCCTGCG...CACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | GTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGGCTCAACGGCTCCACCACTaGATTCAGCTTGGGAGGCTC | + |
Preference number: 4 (lower is better) Translates to: VSRACDHTMSTKQALGVAQRLHH*IQLGRL Trigger: GAGCCTCCCAAGCTGAATCCAGTGGTGGAGCCGTTG...AGCCACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | ACACCCAAGGAGAAAGCATTGAGTGAGCCTGTCAGCTGCGTGGCTCAGGTGGTCCAACGGCTCCACCACTaGATTCAGCTTGGGAGGCTC | + |
Preference number: 4 (lower is better) Translates to: TPKEKALSEPVSCVAQVVQRLHH*IQLGRL Trigger: GAGCCTCCCAAGCTGAATCCAGTGGTGGAGCCGTTG...GACCACCTGAGCCACGCAGCTGACAGGCTCACTCAATGCTTTCTCCTTGGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CAA 72 bp | ACCCACACAGCACAGCTCACACCCAAGGAGAAAGCATaGAGTGAGCCTGTCAGCTGCGTGGCTCAGGTGGTC | + |
Preference number: 4 (lower is better) Translates to: THTAQLTPKEKA*SEPVSCVAQVV Trigger: GACCACCTGAGCCACGCAGCTGACAGGCTCACTCAATGCTTTCTCCTTGGGTGTGAGCTGTGCTGTGTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR TCA 90 bp | TCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGGCTCAGGGGTTGCTGTAAGTaGGGAACTTGGGGGACTCTG | + |
Preference number: 4 (lower is better) Translates to: SAEPVTTPCLPNRLWEWLRGCCK*GTWGTL Trigger: CAGAGTCCCCCAAGTTCCTCACTTACAGCAACCCCT...GAGCCACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS-3UTR TCA 90 bp | TCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGGCTCAAGTTGAGCATAGGCTaGCCCACGTGGGAGATGTGC | + |
Preference number: 4 (lower is better) Translates to: SAEPVTTPCLPNRLWEWLKLSIG*PTWEMC Trigger: GCACATCTCCCACGTGGGTCAGCCTATGCTCAACTT...GAGCCACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR TCA 90 bp | GCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGGCTCCAGCTGTGTTCTGGGCACTaGCAAAGGCCACTTTGTTGG | + |
Preference number: 4 (lower is better) Translates to: AEPVTTPCLPNRLWEWLQLCSGH*QRPLCW Trigger: CCAACAAAGTGGCCTTTGTCAGTGCCCAGAACACAG...CTGGAGCCACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR GCA 90 bp | CACTTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGCCCACGTGGGAGATGTaGACCTCCTCCAGGTACTGG | + |
Preference number: 4 (lower is better) Translates to: HFSVSRACDHTMSTKQALPTWEM*TSSRYW Trigger: CCAGTACCTGGAGGAGGTGCACATCTCCCACGTGGG...CAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | AAGGGCTGCAGTGTCGGAAAGGTACCAACTCCTGGCGGGTCTGACAGCCAGGTATTCAGCAGGCGATGCTaGTCCTCCAGTCTTTTGGAG | + |
Preference number: 4 (lower is better) Translates to: KGCSVGKVPTPGGSDSQVFSRRC*SSSLLE Trigger: CTCCAAAAGACTGGAGGACCAGCATCGCCTGCTGAA...TACCTGGCTGTCAGACCCGCCAGGAGTTGGTACCTTTCCGACACTGCAGCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR CCA 90 bp | ACACCCAAGGAGAAAGCATTGAGTGAGCCTGTCAGCTGCGTGGCTCAGGTGGTCGTGATCTGCTCCACATaGGGCTCCTTGGCAAAGGAG | + |
Preference number: 4 (lower is better) Translates to: TPKEKALSEPVSCVAQVVVICST*GSLAKE Trigger: CTCCTTTGCCAAGGAGCCCCATGTGGAGCAGATCAC...GACCACCTGAGCCACGCAGCTGACAGGCTCACTCAATGCTTTCTCCTTGGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CAA 72 bp | TTCAGGGTGGGTGCTCCACTGCACCACCCACTGCACTaGGAAAGCAGACATGAAAGGGGCCTTTCCCATAGC | + |
Preference number: 4 (lower is better) Translates to: FRVGAPLHHPLH*ESRHERGLSHS Trigger: GCTATGGGAAAGGCCCCTTTCATGTCTGCTTTCCAAGTGCAGTGGGTGGTGCAGTGGAGCACCCACCCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR GCA 90 bp | TTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGATGTAGCAGACGCTTGTaGCTCTTCCTGGCCTCTGGC | + |
Preference number: 4 (lower is better) Translates to: FSVSRACDHTMSTKQALGCSRRL*LFLASG Trigger: GCCAGAGGCCAGGAAGAGGCACAAGCGTCTGCTACA...TCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS-3UTR GCA 90 bp | GTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGGCTAGGTACTGGAAGGGCTaGAGTGTCGGAAAGGTACCA | + |
Preference number: 4 (lower is better) Translates to: VSRACDHTMSTKQALGVARYWKG*SVGKVP Trigger: TGGTACCTTTCCGACACTGCAGCCCTTCCAGTACCT...AGCCACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | GTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGGCTATCCTGGAGACGGAATaGGATGAGACACACAGCTCC | + |
Preference number: 4 (lower is better) Translates to: VSRACDHTMSTKQALGVAILETE*DETHSS Trigger: GGAGCTGTGTGTCTCATCCCATTCCGTCTCCAGGAT...AGCCACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000187445.2 ENSMUST00000189728.7 ENSMUST00000190116.7 |
||
CDS-3UTR CCA 90 bp | ACACCCAAGGAGAAAGCATTGAGTGAGCCTGTCAGCTGCGTGGCTCAGGTGGTCATCCTGGAGACGGAATaGGATGAGACACACAGCTCC | + |
Preference number: 4 (lower is better) Translates to: TPKEKALSEPVSCVAQVVILETE*DETHSS Trigger: GGAGCTGTGTGTCTCATCCCATTCCGTCTCCAGGAT...GACCACCTGAGCCACGCAGCTGACAGGCTCACTCAATGCTTTCTCCTTGGGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CAA 72 bp | TGGGCACTGACAAAGGCCACTTTGTTGGTGTCAGGCTaGAGGCGGATGAAGCCACACTCTCTGTGCATTGGC | + |
Preference number: 4 (lower is better) Translates to: WALTKATLLVSG*RRMKPHSLCIG Trigger: GCCAATGCACAGAGAGTGTGGCTTCATCCGCCTCAAGCCTGACACCAACAAAGTGGCCTTTGTCAGTGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR GCA 90 bp | ACTTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGTCCTTTCCCTGTCTCTaGGCTTGTGTGGCCCCTCAT | + |
Preference number: 4 (lower is better) Translates to: TSVSAEPVTTPCLPNRLWSFPCL*ACVAPH Trigger: ATGAGGGGCCACACAAGCGCAGAGACAGGGAAAGGA...CCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS-3UTR GCA 90 bp | CCGGCAGAATTAGGTACAGCTTTCAGGCTACAGGGTAAAGGGAGAGCCTGGAGTACTCTGCACGGCTTCTaGTGCTGGCTTAGGGGTTAC | + |
Preference number: 4 (lower is better) Translates to: PAELGTAFRLQGKGRAWSTLHGF*CWLRGY Trigger: GTAACCCCTAAGCCAGCAGCAGAAGCCGTGCAGAGT...ACTCCAGGCTCTCCCTTTACCCTGTAGCCTGAAAGCTGTACCTAATTCTGCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR GCA 90 bp | GAGACAGCCATGTGGCTGACCTTATGGTCACACACAGGACTTCCAGGGAGAAGGTTCTTCTTCTCAACCTaGTCCCGCAGGCAGCATACC | + |
Preference number: 4 (lower is better) Translates to: ETAMWLTLWSHTGLPGRRFFFST*SRRQHT Trigger: GGTATGCTGCCTGCGGGAGCAGGTTGAGAAGAAGAA...CCTTCTCCCTGGAAGTCCTGTGTGTGACCATAAGGTCAGCCACATGGCTGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | GGCTGTGTAGTGGTTGCCATAGAGACCGTCTGTTCAAGTTTGCCTTCAGAATTCCCTTGCCCTGCCTGTTaGAACAGTTCACGGCCGCGC | + |
Preference number: 4 (lower is better) Translates to: GCVVVAIETVCSSLPSEFPCPAC*NSSRPR Trigger: GCGCGGCCGTGAACTGTTCCAACAGGCAGGGCAAGG...GAATTCTGAAGGCAAACTTGAACAGACGGTCTCTATGGCAACCACTACACAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR CCA 90 bp | GCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGGCTCCAGACTGGATCAGTCGTTTaGAGTCCTTTAGGGGAAACC | + |
Preference number: 4 (lower is better) Translates to: AEPVTTPCLPNRLWEWLQTGSVV*SPLGET Trigger: GGTTTCCCCTAAAGGACTCCAAACGACTGATCCAGT...CTGGAGCCACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | TCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGGCTCTGGCAAAGGAGATCCTaGAGACGGAATGGGATGAGA | + |
Preference number: 4 (lower is better) Translates to: SAEPVTTPCLPNRLWEWLWQRRS*RRNGMR Trigger: TCTCATCCCATTCCGTCTCCAGGATCTCCTTTGCCA...GAGCCACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000187445.2 ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | GTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGGCTACAATCCCTGTGTTCTaGGCACTGACAAAGGCCACT | + |
Preference number: 4 (lower is better) Translates to: VSRACDHTMSTKQALGVATIPVF*ALTKAT Trigger: AGTGGCCTTTGTCAGTGCCCAGAACACAGGGATTGT...AGCCACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | CACTTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGTGATCTGCTCCACATaGGGCTCCTTGGCAAAGGAG | + |
Preference number: 4 (lower is better) Translates to: HFSVSRACDHTMSTKQALVICST*GSLAKE Trigger: CTCCTTTGCCAAGGAGCCCCATGTGGAGCAGATCAC...CAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189728.7 ENSMUST00000190116.7 |
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3UTR CAA 72 bp | CTGAATTTCCGAGTGATCTGCTCCACATGGGGCTCCTaGGCAAAGGAGATCCTGGAGACGGAATGGGATGAG | + |
Preference number: 4 (lower is better) Translates to: LNFRVICSTWGS*AKEILETEWDE Trigger: CTCATCCCATTCCGTCTCCAGGATCTCCTTTGCCAAGGAGCCCCATGTGGAGCAGATCACTCGGAAATTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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3UTR CAA 72 bp | GTTCCCTCTCGAAGCTTGAGTGGTTTTGCCCAGTATTaGACCCTGTCTCTGCATGCCACACGAGGTTCCCCA | + |
Preference number: 4 (lower is better) Translates to: VPSRSLSGFAQY*TLSLHATRGSP Trigger: TGGGGAACCTCGTGTGGCATGCAGAGACAGGGTCAAATACTGGGCAAAACCACTCAAGCTTCGAGAGGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR TCA 90 bp | AACACTTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCAAGTTGAGCATAGGCTaGCCCACGTGGGAGATGTGC | + |
Preference number: 4 (lower is better) Translates to: NTSVSAEPVTTPCLPNRLKLSIG*PTWEMC Trigger: GCACATCTCCCACGTGGGTCAGCCTATGCTCAACTT...GAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR TCA 90 bp | GCTGGAATGAATGGCCAGCAAACCCCAGGGATTCTCTGTCTATACCTTCCCAGCCTGTGTTCTGGGCACTaGCAAAGGCCACTTTGTTGG | + |
Preference number: 4 (lower is better) Translates to: AGMNGQQTPGILCLYLPSLCSGH*QRPLCW Trigger: CCAACAAAGTGGCCTTTGTCAGTGCCCAGAACACAG...GCTGGGAAGGTATAGACAGAGAATCCCTGGGGTTTGCTGGCCATTCATTCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR GCA 90 bp | AGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGGGCCTCTCTCGCGTGTaGTTGGAGGAGAAACTATAT | + |
Preference number: 4 (lower is better) Translates to: SVSRACDHTMSTKQALGVGLSRV*LEEKLY Trigger: ATATAGTTTCTCCTCCAAGCACACGCGAGAGAGGCC...CACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS-3UTR GCA 90 bp | CACTTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGCCACACTATTCCCACTaGACCTTGGCTCCATCTCTC | + |
Preference number: 4 (lower is better) Translates to: HFSVSRACDHTMSTKQALPHYSH*TLAPSL Trigger: GAGAGATGGAGCCAAGGTGCAGTGGGAATAGTGTGG...CAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | GCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGGCTCCAGACAGTGAAGATCCTATaGTTCCTTTCCCTGTCTCTG | + |
Preference number: 4 (lower is better) Translates to: AEPVTTPCLPNRLWEWLQTVKIL*FLSLSL Trigger: CAGAGACAGGGAAAGGAACCATAGGATCTTCACTGT...CTGGAGCCACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | TCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGGCAAAGGAGATCCTaGAGACGGAATGGGATGAGA | + |
Preference number: 4 (lower is better) Translates to: SVSAEPVTTPCLPNRLWEWQRRS*RRNGMR Trigger: TCTCATCCCATTCCGTCTCCAGGATCTCCTTTGCCA...CTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000187445.2 ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | CCCCAGGGATTCTCTGTCTATACCTTCCCAGCACCAGAGCTGTGGACTAGTGCTACAATCCCTGTGTTCTaGGCACTGACAAAGGCCACT | + |
Preference number: 4 (lower is better) Translates to: PQGFSVYTFPAPELWTSATIPVF*ALTKAT Trigger: AGTGGCCTTTGTCAGTGCCCAGAACACAGGGATTGT...AGCACTAGTCCACAGCTCTGGTGCTGGGAAGGTATAGACAGAGAATCCCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CAA 72 bp | GCCTTCCCTAGCACAAGAGGATCTTTCAGCATACCCTaGGCAGCAGAGCTGACTCTGGACACAGTCTTCATG | + |
Preference number: 4 (lower is better) Translates to: AFPSTRGSFSIP*AAELTLDTVFM Trigger: CATGAAGACTGTGTCCAGAGTCAGCTCTGCTGCCAAGGGTATGCTGAAAGATCCTCTTGTGCTAGGGAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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3UTR CAA 72 bp | CTTTATTGGGCTTTCTTACCGTGCACAGGTAAGGAGTaGCTTTTCAGGGTGGGTGCTCCACTGCACCACCCA | + |
Preference number: 4 (lower is better) Translates to: LYWAFLPCTGKE*LFRVGAPLHHP Trigger: TGGGTGGTGCAGTGGAGCACCCACCCTGAAAAGCAACTCCTTACCTGTGCACGGTAAGAAAGCCCAATAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR GCA 90 bp | ACTTCCACAATCCCTGTGTTCTGGGCACTGACAAAGGCCACTTTGTTGGTGTCATTCTCGCCCTTGCCCTaGCTGTTGGAACAGTTCACG | + |
Preference number: 4 (lower is better) Translates to: TSTIPVFWALTKATLLVSFSPLP*LLEQFT Trigger: CGTGAACTGTTCCAACAGGCAGGGCAAGGGCGAGAA...TGACACCAACAAAGTGGCCTTTGTCAGTGCCCAGAACACAGGGATTGTGGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR GCA 90 bp | TCAAGAGATCCACTTGCCTCTGTCTCCCAAGTACTGGGATTAAAGGTATGCGCCGGCTTCAGCAGGCGATaGTGGTCCTCCAGTCTTTTG | + |
Preference number: 4 (lower is better) Translates to: SRDPLASVSQVLGLKVCAGFSRR*WSSSLL Trigger: CAAAAGACTGGAGGACCAGCATCGCCTGCTGAAGCC...GGCGCATACCTTTAATCCCAGTACTTGGGAGACAGAGGCAAGTGGATCTCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR GCA 90 bp | GTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGGCTAAGCCACACTCTCTGTaGATTGGCTTGTGTGTTTCT | + |
Preference number: 4 (lower is better) Translates to: VSRACDHTMSTKQALGVAKPHSL*IGLCVS Trigger: AGAAACACACAAGCCAATGCACAGAGAGTGTGGCTT...AGCCACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR GCA 90 bp | CACCTGGACAACACTTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCATGGCTGTGTAGTGGTTaGCATAGAGACCGTCTGTTC | + |
Preference number: 4 (lower is better) Translates to: HLDNTSVSAEPVTTPCLPWLCSG*HRDRLF Trigger: GAACAGACGGTCTCTATGGCAACCACTACACAGCCA...TGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGTGTTGTCCAGGTG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | GGCACTGACAAAGGCCACTTTGTTGGTGTCAGGCTTGAGGCGGATGAAGCCACAGGCTGCATCATCTTGTaGAGAAGCTCGCTTCAACTT | + |
Preference number: 4 (lower is better) Translates to: GTDKGHFVGVRLEADEATGCIIL*RSSLQL Trigger: AAGTTGAAGCGAGCTTCTCCACAAGATGATGCAGCC...TGTGGCTTCATCCGCCTCAAGCCTGACACCAACAAAGTGGCCTTTGTCAGTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR CCA 90 bp | TTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGATGGCAAAGGAGATCCTaGAGACGGAATGGGATGAGA | + |
Preference number: 4 (lower is better) Translates to: FSVSRACDHTMSTKQALGWQRRS*RRNGMR Trigger: TCTCATCCCATTCCGTCTCCAGGATCTCCTTTGCCA...TCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000187445.2 ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | TCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGGCTCTGGCTTGTGTGTTTCTaGATGGAAGGAGTTGAACGA | + |
Preference number: 4 (lower is better) Translates to: SAEPVTTPCLPNRLWEWLWLVCF*MEGVER Trigger: TCGTTCAACTCCTTCCATCCAGAAACACACAAGCCA...GAGCCACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR GCA 90 bp | GGCTGTGTAGTGGTTGCCATAGAGACCGTCTGTTCAAGTTTGCCTTCAGAATTCGGCTTCAGCAGGCGATaGTGGTCCTCCAGTCTTTTG | + |
Preference number: 4 (lower is better) Translates to: GCVVVAIETVCSSLPSEFGFSRR*WSSSLL Trigger: CAAAAGACTGGAGGACCAGCATCGCCTGCTGAAGCC...GAATTCTGAAGGCAAACTTGAACAGACGGTCTCTATGGCAACCACTACACAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR CCA 90 bp | CACTTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGACTGGATCAGTCGTTTaGAGTCCTTTAGGGGAAACC | + |
Preference number: 4 (lower is better) Translates to: HFSVSRACDHTMSTKQALTGSVV*SPLGET Trigger: GGTTTCCCCTAAAGGACTCCAAACGACTGATCCAGT...CAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | GAGACAGCCATGTGGCTGACCTTATGGTCACACACAGGACTTCCAGGGAGAAGGTTCTTCTCTGACAGGTaGAAAATAGAGGGTACAGCC | + |
Preference number: 4 (lower is better) Translates to: ETAMWLTLWSHTGLPGRRFFSDR*KIEGTA Trigger: GGCTGTACCCTCTATTTTCCACCTGTCAGAGAAGAA...CCTTCTCCCTGGAAGTCCTGTGTGTGACCATAAGGTCAGCCACATGGCTGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | GTGTCAGGCTTGAGGCGGATGAAGCCACACTCTCTGTGCATTGGCTTGTGTGTTTTCGGGACTCTGGCTTaGCCATCAAGTTATCACTTG | + |
Preference number: 4 (lower is better) Translates to: VSGLRRMKPHSLCIGLCVFGTLA*PSSYHL Trigger: CAAGTGATAACTTGATGGCCAAGCCAGAGTCCCGAA...AACACACAAGCCAATGCACAGAGAGTGTGGCTTCATCCGCCTCAAGCCTGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR CCA 90 bp | CCGGCAGAATTAGGTACAGCTTTCAGGCTACAGGGTAAAGGGAGAGCCTGGAGTCAACTTTCGGGACTCTaGCTTGGCCATCAAGTTATC | + |
Preference number: 4 (lower is better) Translates to: PAELGTAFRLQGKGRAWSQLSGL*LGHQVI Trigger: GATAACTTGATGGCCAAGCCAGAGTCCCGAAAGTTG...ACTCCAGGCTCTCCCTTTACCCTGTAGCCTGAAAGCTGTACCTAATTCTGCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | CACTTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGCTGCATCATCTTGTaGAGAAGCTCGCTTCAACTT | + |
Preference number: 4 (lower is better) Translates to: HFSVSRACDHTMSTKQALGCIIL*RSSLQL Trigger: AAGTTGAAGCGAGCTTCTCCACAAGATGATGCAGCC...CAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS-3UTR TCA 90 bp | TCCGCATGCTCAGGTAACAGGTCACATCCTCAAATACAAACATTAACAACCAAGGGAGACGGAATGGGATaGGACACACAGCTCCTGCCC | + |
Preference number: 4 (lower is better) Translates to: SACSGNRSHPQIQTLTTKGDGMG*DTQLLP Trigger: GGGCAGGAGCTGTGTGTCTCATCCCATTCCGTCTCC...CTTGGTTGTTAATGTTTGTATTTGAGGATGTGACCTGTTACCTGAGCATGCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187445.2 |
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CDS-3UTR GCA 90 bp | TTAGGAAGCTCTTTTGCAAATAGGCACAGCTTGACTGCTTCAAGATGGCAGTTGCGCGTTTCTCGCCCTTaGCCTGCCTGTTGGAACAGT | + |
Preference number: 4 (lower is better) Translates to: LGSSFANRHSLTASRWQLRVSRP*PACWNS Trigger: ACTGTTCCAACAGGCAGGGCAAGGGCGAGAAACGCG...CAACTGCCATCTTGAAGCAGTCAAGCTGTGCCTATTTGCAAAAGAGCTTCCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR GCA 90 bp | CCTAGAACAATTCAAGGCAGGATTCTGCCAAAATTCACTCTGGTTAACTGTAGCGCTTCTCCCGCAGCTTaGGCACCTGGCTGTCAGATC | + |
Preference number: 4 (lower is better) Translates to: PRTIQGRILPKFTLVNCSASPAA*APGCQI Trigger: GATCTGACAGCCAGGTGCGCAAGCTGCGGGAGAAGC...GCTACAGTTAACCAGAGTGAATTTTGGCAGAATCCTGCCTTGAATTGTTCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR GCA 90 bp | GAAAGCAGACATGAAAGGGGCCTTTCCCATAGCACACAGATGAAGCTCAACTCTAGGTACTGGAAGGGCTaGAGTGTCGGAAAGGTACCA | + |
Preference number: 4 (lower is better) Translates to: ESRHERGLSHSTQMKLNSRYWKG*SVGKVP Trigger: TGGTACCTTTCCGACACTGCAGCCCTTCCAGTACCT...AGAGTTGAGCTTCATCTGTGTGCTATGGGAAAGGCCCCTTTCATGTCTGCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR GCA 90 bp | ACTTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGAAGCCACACTCTCTGTaGATTGGCTTGTGTGTTTCT | + |
Preference number: 4 (lower is better) Translates to: TSVSAEPVTTPCLPNRLWKPHSL*IGLCVS Trigger: AGAAACACACAAGCCAATGCACAGAGAGTGTGGCTT...CCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR GCA 90 bp | TCAAGAGATCCACTTGCCTCTGTCTCCCAAGTACTGGGATTAAAGGTATGCGCCTGGCTGTGTAGTGGTTaGCATAGAGACCGTCTGTTC | + |
Preference number: 4 (lower is better) Translates to: SRDPLASVSQVLGLKVCAWLCSG*HRDRLF Trigger: GAACAGACGGTCTCTATGGCAACCACTACACAGCCA...GGCGCATACCTTTAATCCCAGTACTTGGGAGACAGAGGCAAGTGGATCTCTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | CATGTCTACCAAACAGGCTCTGGGAGTGGCTCCAGGTTAAGGGGTCACCTTCTTACAGCTTTTAACCACTaGATCAGTCGTTTGGAGTCC | + |
Preference number: 4 (lower is better) Translates to: HVYQTGSGSGSRLRGHLLTAFNH*ISRLES Trigger: GGACTCCAAACGACTGATCCAGTGGTTAAAAGCTGT...AAGAAGGTGACCCCTTAACCTGGAGCCACTCCCAGAGCCTGTTTGGTAGACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR CCA 90 bp | ATAGAGACCGTCTGTTCAAGTTTGCCTTCAGAATTCAGCCTGAATTTCCGAGTGGTCTTTCTCCTAGCATaGCCATGTCCTCCAGCCCCC | + |
Preference number: 4 (lower is better) Translates to: IETVCSSLPSEFSLNFRVVFLLA*PCPPAP Trigger: GGGGGCTGGAGGACATGGCCATGCTAGGAGAAAGAC...CACTCGGAAATTCAGGCTGAATTCTGAAGGCAAACTTGAACAGACGGTCTCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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3UTR CAA 72 bp | GCTAATGCTCAGAGTCCTGGCTTCCAACTCCAGTACTaGGGGAAGAAGAAAAGGAGGTTGTACGCTTCAGCA | + |
Preference number: 4 (lower is better) Translates to: ANAQSPGFQLQY*GKKKRRLYASA Trigger: TGCTGAAGCGTACAACCTCCTTTTCTTCTTCCCCAAGTACTGGAGTTGGAAGCCAGGACTCTGAGCATTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR TCA 90 bp | TCAAGAGATCCACTTGCCTCTGTCTCCCAAGTACTGGGATTAAAGGTATGCGCCCTCACTACAGAGGAATaGATACTTAGTCGGGGTCCA | + |
Preference number: 4 (lower is better) Translates to: SRDPLASVSQVLGLKVCALTTEE*ILSRGP Trigger: TGGACCCCGACTAAGTATTCATTCCTCTGTAGTGAG...GGCGCATACCTTTAATCCCAGTACTTGGGAGACAGAGGCAAGTGGATCTCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR GCA 90 bp | TCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGGCTCCTGTCTTTGGTAAAATaGTCACTACAGAGGAATGAA | + |
Preference number: 4 (lower is better) Translates to: SAEPVTTPCLPNRLWEWLLSLVK*SLQRNE Trigger: TTCATTCCTCTGTAGTGAGCATTTTACCAAAGACAG...GAGCCACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | CCTAATTTCTTTCTTGTCGTTTCTTCTTTGAGCATGACAAACTGCAACCAACCTCCTTGCCCTGCCTGTTaGAACAGTTCACGGCCGCGC | + |
Preference number: 4 (lower is better) Translates to: PNFFLVVSSLSMTNCNQPPCPAC*NSSRPR Trigger: GCGCGGCCGTGAACTGTTCCAACAGGCAGGGCAAGG...AGGTTGGTTGCAGTTTGTCATGCTCAAAGAAGAAACGACAAGAAAGAAATTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | AACACTTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTTCTTCTCTGACAGGTaGAAAATAGAGGGTACAGCC | + |
Preference number: 4 (lower is better) Translates to: NTSVSAEPVTTPCLPNRLFFSDR*KIEGTA Trigger: GGCTGTACCCTCTATTTTCCACCTGTCAGAGAAGAA...GAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | AGTTTGCCTTCAGAATTCAGCCTGAATTTCCGAGTGATCTGCTCCACATGGGGCCAACTTTCGGGACTCTaGCTTGGCCATCAAGTTATC | + |
Preference number: 4 (lower is better) Translates to: SLPSEFSLNFRVICSTWGQLSGL*LGHQVI Trigger: GATAACTTGATGGCCAAGCCAGAGTCCCGAAAGTTG...GCCCCATGTGGAGCAGATCACTCGGAAATTCAGGCTGAATTCTGAAGGCAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR CCA 90 bp | TTGGTGCACACAGCTATAACACAAGCGCTTGGGAAGAAGAGGCAGGAGGACCAGTCTCTCGCGTGTGCTTaGAGGAGAAACTATATGAAT | + |
Preference number: 4 (lower is better) Translates to: LVHTAITQALGKKRQEDQSLACA*RRNYMN Trigger: ATTCATATAGTTTCTCCTCCAAGCACACGCGAGAGA...CTGGTCCTCCTGCCTCTTCTTCCCAAGCGCTTGTGTTATAGCTGTGTGCACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | CACTTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGTTGTGTGTTTCTGGATaGAAGGAGTTGAACGAGAAG | + |
Preference number: 4 (lower is better) Translates to: HFSVSRACDHTMSTKQALLCVSG*KELNEK Trigger: CTTCTCGTTCAACTCCTTCCATCCAGAAACACACAA...CAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | AACACTTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGCTTGTGTGTTTCTaGATGGAAGGAGTTGAACGA | + |
Preference number: 4 (lower is better) Translates to: NTSVSAEPVTTPCLPNRLWLVCF*MEGVER Trigger: TCGTTCAACTCCTTCCATCCAGAAACACACAAGCCA...GAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR TCA 90 bp | ACTTCCACAATCCCTGTGTTCTGGGCACTGACAAAGGCCACTTTGTTGGTGTCAGTCCAATTATCCCTCTaGACAGCTTTTAACCACTGG | + |
Preference number: 4 (lower is better) Translates to: TSTIPVFWALTKATLLVSVQLSL*TAFNHW Trigger: CCAGTGGTTAAAAGCTGTTCAGAGGGATAATTGGAC...TGACACCAACAAAGTGGCCTTTGTCAGTGCCCAGAACACAGGGATTGTGGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR TCA 90 bp | TCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGGAGAAACTATATGAATaGAGTGAGCCAATGAACTTG | + |
Preference number: 4 (lower is better) Translates to: SVSAEPVTTPCLPNRLWEEKLYE*SEPMNL Trigger: CAAGTTCATTGGCTCACTTCATTCATATAGTTTCTC...CTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS-3UTR GCA 90 bp | CCTAGAACAATTCAAGGCAGGATTCTGCCAAAATTCACTCTGGTTAACTGTAGCTCCTTTCCCTGTCTCTaGGCTTGTGTGGCCCCTCAT | + |
Preference number: 4 (lower is better) Translates to: PRTIQGRILPKFTLVNCSSFPCL*ACVAPH Trigger: ATGAGGGGCCACACAAGCGCAGAGACAGGGAAAGGA...GCTACAGTTAACCAGAGTGAATTTTGGCAGAATCCTGCCTTGAATTGTTCTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR GCA 90 bp | ATAGAGACCGTCTGTTCAAGTTTGCCTTCAGAATTCAGCCTGAATTTCCGAGTGCCACACTATTCCCACTaGACCTTGGCTCCATCTCTC | + |
Preference number: 4 (lower is better) Translates to: IETVCSSLPSEFSLNFRVPHYSH*TLAPSL Trigger: GAGAGATGGAGCCAAGGTGCAGTGGGAATAGTGTGG...CACTCGGAAATTCAGGCTGAATTCTGAAGGCAAACTTGAACAGACGGTCTCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR CCA 90 bp | GGCTATAGTGAACTTAGGCTCCATGAGACCTTGCTTCCAAAACAAAAACCTCCTTTCAGCAGGCGATGCTaGTCCTCCAGTCTTTTGGAG | + |
Preference number: 4 (lower is better) Translates to: GYSELRLHETLLPKQKPPFSRRC*SSSLLE Trigger: CTCCAAAAGACTGGAGGACCAGCATCGCCTGCTGAA...AGGAGGTTTTTGTTTTGGAAGCAAGGTCTCATGGAGCCTAAGTTCACTATAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | TCAAGAGATCCACTTGCCTCTGTCTCCCAAGTACTGGGATTAAAGGTATGCGCCACAGTGAAGATCCTATaGTTCCTTTCCCTGTCTCTG | + |
Preference number: 4 (lower is better) Translates to: SRDPLASVSQVLGLKVCATVKIL*FLSLSL Trigger: CAGAGACAGGGAAAGGAACCATAGGATCTTCACTGT...GGCGCATACCTTTAATCCCAGTACTTGGGAGACAGAGGCAAGTGGATCTCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | CCTAATTTCTTTCTTGTCGTTTCTTCTTTGAGCATGACAAACTGCAACCAACCTCGCAGGCAGCATACCTaGCTCTTGTTCTGCCGAGCG | + |
Preference number: 4 (lower is better) Translates to: PNFFLVVSSLSMTNCNQPRRQHT*LLFCRA Trigger: CGCTCGGCAGAACAAGAGCCAGGTATGCTGCCTGCG...AGGTTGGTTGCAGTTTGTCATGCTCAAAGAAGAAACGACAAGAAAGAAATTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | AACACTTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTTGTGTGTTTCTGGATaGAAGGAGTTGAACGAGAAG | + |
Preference number: 4 (lower is better) Translates to: NTSVSAEPVTTPCLPNRLLCVSG*KELNEK Trigger: CTTCTCGTTCAACTCCTTCCATCCAGAAACACACAA...GAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR GCA 90 bp | GGCTATAGTGAACTTAGGCTCCATGAGACCTTGCTTCCAAAACAAAAACCTCCTGGCCTCTCTCGCGTGTaGTTGGAGGAGAAACTATAT | + |
Preference number: 4 (lower is better) Translates to: GYSELRLHETLLPKQKPPGLSRV*LEEKLY Trigger: ATATAGTTTCTCCTCCAAGCACACGCGAGAGAGGCC...AGGAGGTTTTTGTTTTGGAAGCAAGGTCTCATGGAGCCTAAGTTCACTATAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR TCA 90 bp | TTAGGAAGCTCTTTTGCAAATAGGCACAGCTTGACTGCTTCAAGATGGCAGTTGGTCCAATTATCCCTCTaGACAGCTTTTAACCACTGG | + |
Preference number: 4 (lower is better) Translates to: LGSSFANRHSLTASRWQLVQLSL*TAFNHW Trigger: CCAGTGGTTAAAAGCTGTTCAGAGGGATAATTGGAC...CAACTGCCATCTTGAAGCAGTCAAGCTGTGCCTATTTGCAAAAGAGCTTCCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | CCTAGAACAATTCAAGGCAGGATTCTGCCAAAATTCACTCTGGTTAACTGTAGCTTCGGGACTCTGGCTTaGCCATCAAGTTATCACTTG | + |
Preference number: 4 (lower is better) Translates to: PRTIQGRILPKFTLVNCSFGTLA*PSSYHL Trigger: CAAGTGATAACTTGATGGCCAAGCCAGAGTCCCGAA...GCTACAGTTAACCAGAGTGAATTTTGGCAGAATCCTGCCTTGAATTGTTCTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR CCA 90 bp | ATAGAGACCGTCTGTTCAAGTTTGCCTTCAGAATTCAGCCTGAATTTCCGAGTGTCTCTCGCGTGTGCTTaGAGGAGAAACTATATGAAT | + |
Preference number: 4 (lower is better) Translates to: IETVCSSLPSEFSLNFRVSLACA*RRNYMN Trigger: ATTCATATAGTTTCTCCTCCAAGCACACGCGAGAGA...CACTCGGAAATTCAGGCTGAATTCTGAAGGCAAACTTGAACAGACGGTCTCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR CCA 90 bp | AACAGGTCACATCCTCAAATACAAACATTAACAACCAAGATACACAGCATGTCTATCCTGGAGACGGAATaGGATGAGACACACAGCTCC | + |
Preference number: 4 (lower is better) Translates to: NRSHPQIQTLTTKIHSMSILETE*DETHSS Trigger: GGAGCTGTGTGTCTCATCCCATTCCGTCTCCAGGAT...AGACATGCTGTGTATCTTGGTTGTTAATGTTTGTATTTGAGGATGTGACCTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187445.2 |
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CDS CCA 90 bp | CTCTTGTCTGCCCCCTCAGCGTCGGTGGAGGAAGAGGCCTTCTGGTaGTCAGCCTCTGTAGCAGACGCTTGTGCCTCTTCCTGGCCTCTG | + |
Preference number: 5 (lower is better) Translates to: LLSAPSASVEEEAFW*SASVADACASSWPL Trigger: CAGAGGCCAGGAAGAGGCACAAGCGTCTGCTACAGAGGCTGACCACCAGAAGGCCTCTTCCTCCACCGACGCTGAGGGGGCAGACAAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS-3UTR CAA 90 bp | TGGGAGATGTGCACCTCCTCCAGGTACTGGAAGGGCTGCAGTGTCGGAAAGGTAAGGGAGTCGATGAGCTaGCAGGCCCCCGAGGCCGAC | + |
Preference number: 5 (lower is better) Translates to: WEMCTSSRYWKGCSVGKVRESMS*QAPEAD Trigger: GTCGGCCTCGGGGGCCTGCAAGCTCATCGACTCCCT...TACCTTTCCGACACTGCAGCCCTTCCAGTACCTGGAGGAGGTGCACATCTCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR CAA 90 bp | GAGACAGCCATGTGGCTGACCTTATGGTCACACACAGGACTTCCAGGGAGAAGGAGGGAGTCGATGAGCTaGCAGGCCCCCGAGGCCGAC | + |
Preference number: 5 (lower is better) Translates to: ETAMWLTLWSHTGLPGRRRESMS*QAPEAD Trigger: GTCGGCCTCGGGGGCCTGCAAGCTCATCGACTCCCT...CCTTCTCCCTGGAAGTCCTGTGTGTGACCATAAGGTCAGCCACATGGCTGTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS GCA 90 bp | CCTTTAGGGGAAACCTGTGGAAGGAGACAGCGCGTTTCTCGCCCTTaGCCTGCCTGTTGGAACAGTTCACGGCCGCGCAGCAGATCACCA | + |
Preference number: 5 (lower is better) Translates to: PLGETCGRRQRVSRP*PACWNSSRPRSRSP Trigger: TGGTGATCTGCTGCGCGGCCGTGAACTGTTCCAACAGGCAGGGCAAGGGCGAGAAACGCGCTGTCTCCTTCCACAGGTTTCCCCTAAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS GCA 90 bp | CTGACCCTGCTCCTGGCTGACAGCACCTGGGGTGACCTTGGGGGCTaGATCATCTTGTGGAGAAGCTCGCTTCAACTTTCGGGACTCTGG | + |
Preference number: 5 (lower is better) Translates to: LTLLLADSTWGDLGG*IILWRSSLQLSGLW Trigger: CCAGAGTCCCGAAAGTTGAAGCGAGCTTCTCCACAAGATGATGCAGCCCCCAAGGTCACCCCAGGTGCTGTCAGCCAGGAGCAGGGTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS GCA 90 bp | AGATCCCGGAGGTGTGAAGTCGTCCATAGAAATGCCGCTCTTGTCTaGCCCCTCAGCGTCGGTGGAGGAAGAGGCCTTCTGGTGGTCAGC | + |
Preference number: 5 (lower is better) Translates to: RSRRCEVVHRNAALV*PLSVGGGRGLLVVS Trigger: GCTGACCACCAGAAGGCCTCTTCCTCCACCGACGCTGAGGGGGCAGACAAGAGCGGCATTTCTATGGACGACTTCACACCTCCGGGATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS CCA 90 bp | GCCTTCTGGTGGTCAGCCTCTGTAGCAGACGCTTGTGCCTCTTCCTaGCCTCTGGCCAATGGGGCAGCCGGGTCATCTCCTGGAGTTTTT | + |
Preference number: 5 (lower is better) Translates to: AFWWSASVADACASS*PLANGAAGSSPGVF Trigger: AAAAACTCCAGGAGATGACCCGGCTGCCCCATTGGCCAGAGGCCAGGAAGAGGCACAAGCGTCTGCTACAGAGGCTGACCACCAGAAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS-3UTR CAA 90 bp | GGCTCTGGGAGTGGCTCCAGGTTAAGGGGTCACCTTCTTGTAGGTAATGTGAAGTCCCTGTCTCTGCGCTaGTGTGGCCCCTCATGGCCG | + |
Preference number: 5 (lower is better) Translates to: GSGSGSRLRGHLLVGNVKSLSLR*CGPSWP Trigger: CGGCCATGAGGGGCCACACAAGCGCAGAGACAGGGA...CTTCACATTACCTACAAGAAGGTGACCCCTTAACCTGGAGCCACTCCCAGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR CAA 90 bp | GCTGGAATGAATGGCCAGCAAACCCCAGGGATTCTCTGTCTATACCTTCCCAGCTCCCTGTCTCTGCGCTaGTGTGGCCCCTCATGGCCG | + |
Preference number: 5 (lower is better) Translates to: AGMNGQQTPGILCLYLPSSLSLR*CGPSWP Trigger: CGGCCATGAGGGGCCACACAAGCGCAGAGACAGGGA...GCTGGGAAGGTATAGACAGAGAATCCCTGGGGTTTGCTGGCCATTCATTCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR CAA 90 bp | ACACCCAAGGAGAAAGCATTGAGTGAGCCTGTCAGCTGCGTGGCTCAGGTGGTCGCACCTGGGGTGACCTaGGGGGCTGCATCATCTTGT | + |
Preference number: 5 (lower is better) Translates to: TPKEKALSEPVSCVAQVVAPGVT*GAASSC Trigger: ACAAGATGATGCAGCCCCCAAGGTCACCCCAGGTGC...GACCACCTGAGCCACGCAGCTGACAGGCTCACTCAATGCTTTCTCCTTGGGTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS CCA 90 bp | CTGGCTGACAGCACCTGGGGTGACCTTGGGGGCTGCATCATCTTGTaGAGAAGCTCGCTTCAACTTTCGGGACTCTGGCTTGGCCATCAA | + |
Preference number: 5 (lower is better) Translates to: LADSTWGDLGGCIIL*RSSLQLSGLWLGHQ Trigger: TTGATGGCCAAGCCAGAGTCCCGAAAGTTGAAGCGAGCTTCTCCACAAGATGATGCAGCCCCCAAGGTCACCCCAGGTGCTGTCAGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS CCA 90 bp | CTGGGCTCACCTGCTCCACATGGGGCTCCTTGGCAAAGGAGATCCTaGAGACGGAATGGGATGAGACACACAGCTCCTGCCCATTCACTT | + |
Preference number: 5 (lower is better) Translates to: LGSPAPHGAPWQRRS*RRNGMRHTAPAHSL Trigger: AAGTGAATGGGCAGGAGCTGTGTGTCTCATCCCATTCCGTCTCCAGGATCTCCTTTGCCAAGGAGCCCCATGTGGAGCAGGTGAGCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189472.2 |
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CDS-3UTR CAA 90 bp | CCTTCAGAATTCAGCCTGAATTTCCGAGTGATCTGCTCCACATGGGGCTCCTTGCCCTTGCCCTGCCTGTaGGAACAGTTCACGGCCGCG | + |
Preference number: 5 (lower is better) Translates to: PSEFSLNFRVICSTWGSLPLPCL*EQFTAA Trigger: CGCGGCCGTGAACTGTTCCAACAGGCAGGGCAAGGG...CAAGGAGCCCCATGTGGAGCAGATCACTCGGAAATTCAGGCTGAATTCTGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR CAA 90 bp | GAGACAGCCATGTGGCTGACCTTATGGTCACACACAGGACTTCCAGGGAGAAGGTCCACATGGGGCTCCTaGGCAAAGGAGATCCTGGAG | + |
Preference number: 5 (lower is better) Translates to: ETAMWLTLWSHTGLPGRRSTWGS*AKEILE Trigger: CTCCAGGATCTCCTTTGCCAAGGAGCCCCATGTGGA...CCTTCTCCCTGGAAGTCCTGTGTGTGACCATAAGGTCAGCCACATGGCTGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR CAA 90 bp | GTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGGTTGTTGGTGTCAGGCTaGAGGCGGATGAAGCCACAC | + |
Preference number: 5 (lower is better) Translates to: VSAEPVTTPCLPNRLWEWLLVSG*RRMKPH Trigger: GTGTGGCTTCATCCGCCTCAAGCCTGACACCAACAA...CCACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS CCA 90 bp | GACAGTGAAGATCCTATGGTTCCTTTCCCTGTCTCTGCGCTTGTGTaGCCCCTCATGGCCGCTGTGGTCTTTCTCCTAGCATGGCCATGT | + |
Preference number: 5 (lower is better) Translates to: DSEDPMVPFPVSALV*PLMAAVVFLLAWPC Trigger: ACATGGCCATGCTAGGAGAAAGACCACAGCGGCCATGAGGGGCCACACAAGCGCAGAGACAGGGAAAGGAACCATAGGATCTTCACTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS-3UTR CAA 90 bp | TTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGATCCACATGGGGCTCCTaGGCAAAGGAGATCCTGGAG | + |
Preference number: 5 (lower is better) Translates to: FSVSRACDHTMSTKQALGSTWGS*AKEILE Trigger: CTCCAGGATCTCCTTTGCCAAGGAGCCCCATGTGGA...TCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000187445.2 ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS GCA 90 bp | ATGACCTCGTTGATGGACATGGGACTGGCATCACTATGCTCACTCTaGACGGCTTCTGCTGCTGGCTTAGGGGTTACATCAGTTGGAGGG | + |
Preference number: 5 (lower is better) Translates to: MTSLMDMGLASLCSL*TASAAGLGVTSVGG Trigger: CCCTCCAACTGATGTAACCCCTAAGCCAGCAGCAGAAGCCGTGCAGAGTGAGCATAGTGATGCCAGTCCCATGTCCATCAACGAGGTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS GCA 90 bp | GCCGACAGAATGACCTCGTTGATGGACATGGGACTGGCATCACTATaGTCACTCTGCACGGCTTCTGCTGCTGGCTTAGGGGTTACATCA | + |
Preference number: 5 (lower is better) Translates to: ADRMTSLMDMGLASL*SLCTASAAGLGVTS Trigger: TGATGTAACCCCTAAGCCAGCAGCAGAAGCCGTGCAGAGTGAGCATAGTGATGCCAGTCCCATGTCCATCAACGAGGTCATTCTGTCGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS-3UTR CAA 90 bp | TGGGAGATGTGCACCTCCTCCAGGTACTGGAAGGGCTGCAGTGTCGGAAAGGTACACTGGATCAGTCGTTaGGAGTCCTTTAGGGGAAAC | + |
Preference number: 5 (lower is better) Translates to: WEMCTSSRYWKGCSVGKVHWISR*ESFRGN Trigger: GTTTCCCCTAAAGGACTCCAAACGACTGATCCAGTG...TACCTTTCCGACACTGCAGCCCTTCCAGTACCTGGAGGAGGTGCACATCTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR CAA 90 bp | ACTTCCACAATCCCTGTGTTCTGGGCACTGACAAAGGCCACTTTGTTGGTGTCAGCACCTGGGGTGACCTaGGGGGCTGCATCATCTTGT | + |
Preference number: 5 (lower is better) Translates to: TSTIPVFWALTKATLLVSAPGVT*GAASSC Trigger: ACAAGATGATGCAGCCCCCAAGGTCACCCCAGGTGC...TGACACCAACAAAGTGGCCTTTGTCAGTGCCCAGAACACAGGGATTGTGGAAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR CAA 90 bp | GGCACTGACAAAGGCCACTTTGTTGGTGTCAGGCTTGAGGCGGATGAAGCCACAGACAGAATGACCTCGTaGATGGACATGGGACTGGCA | + |
Preference number: 5 (lower is better) Translates to: GTDKGHFVGVRLEADEATDRMTS*MDMGLA Trigger: TGCCAGTCCCATGTCCATCAACGAGGTCATTCTGTC...TGTGGCTTCATCCGCCTCAAGCCTGACACCAACAAAGTGGCCTTTGTCAGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR CAA 90 bp | GAATGGCCAGCAAACCCCAGGGATTCTCTGTCTATACCTTCCCAGCACCAGAGCGACAGAATGACCTCGTaGATGGACATGGGACTGGCA | + |
Preference number: 5 (lower is better) Translates to: EWPANPRDSLSIPSQHQSDRMTS*MDMGLA Trigger: TGCCAGTCCCATGTCCATCAACGAGGTCATTCTGTC...GCTCTGGTGCTGGGAAGGTATAGACAGAGAATCCCTGGGGTTTGCTGGCCATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR CAA 90 bp | ACTTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGTTGTTGGTGTCAGGCTaGAGGCGGATGAAGCCACAC | + |
Preference number: 5 (lower is better) Translates to: TSVSAEPVTTPCLPNRLWLLVSG*RRMKPH Trigger: GTGTGGCTTCATCCGCCTCAAGCCTGACACCAACAA...CCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR CAA 90 bp | TTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAACAAAGGCCACTTTGTaGGTGTCAGGCTTGAGGCGG | + |
Preference number: 5 (lower is better) Translates to: FSVSRACDHTMSTKQALGTKATL*VSGLRR Trigger: CCGCCTCAAGCCTGACACCAACAAAGTGGCCTTTGT...TCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR CAA 90 bp | TCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGCACTGGATCAGTCGTTaGGAGTCCTTTAGGGGAAAC | + |
Preference number: 5 (lower is better) Translates to: SVSAEPVTTPCLPNRLWEHWISR*ESFRGN Trigger: GTTTCCCCTAAAGGACTCCAAACGACTGATCCAGTG...CTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS-3UTR CAA 90 bp | ACACCCAAGGAGAAAGCATTGAGTGAGCCTGTCAGCTGCGTGGCTCAGGTGGTCTTTCGGGACTCTGGCTaGGCCATCAAGTTATCACTT | + |
Preference number: 5 (lower is better) Translates to: TPKEKALSEPVSCVAQVVFRDSG*AIKLSL Trigger: AAGTGATAACTTGATGGCCAAGCCAGAGTCCCGAAA...GACCACCTGAGCCACGCAGCTGACAGGCTCACTCAATGCTTTCTCCTTGGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR CAA 90 bp | ACACCCAAGGAGAAAGCATTGAGTGAGCCTGTCAGCTGCGTGGCTCAGGTGGTCCTCTCTCGCGTGTGCTaGGAGGAGAAACTATATGAA | + |
Preference number: 5 (lower is better) Translates to: TPKEKALSEPVSCVAQVVLSRVC*EEKLYE Trigger: TTCATATAGTTTCTCCTCCAAGCACACGCGAGAGAG...GACCACCTGAGCCACGCAGCTGACAGGCTCACTCAATGCTTTCTCCTTGGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR CAA 90 bp | GCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGTGGCTCCAGTCTGGATGGAAGGAGTaGAACGAGAAGTTGAGCATA | + |
Preference number: 5 (lower is better) Translates to: AEPVTTPCLPNRLWEWLQSGWKE*NEKLSI Trigger: TATGCTCAACTTCTCGTTCAACTCCTTCCATCCAGA...CTGGAGCCACTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR CAA 90 bp | CCTGGACAACACTTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAAACAAAGGCCACTTTGTaGGTGTCAGGCTTGAGGCGG | + |
Preference number: 5 (lower is better) Translates to: PGQHFSVSRACDHTMSTKTKATL*VSGLRR Trigger: CCGCCTCAAGCCTGACACCAACAAAGTGGCCTTTGT...TTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGTGTTGTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR CAA 90 bp | ACTTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGCTGACAAAGGCCACTTaGTTGGTGTCAGGCTTGAGG | + |
Preference number: 5 (lower is better) Translates to: TSVSAEPVTTPCLPNRLWLTKAT*LVSGLR Trigger: CCTCAAGCCTGACACCAACAAAGTGGCCTTTGTCAG...CCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR CAA 90 bp | CACTTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGCTGACAAAGGCCACTTaGTTGGTGTCAGGCTTGAGG | + |
Preference number: 5 (lower is better) Translates to: HFSVSRACDHTMSTKQALLTKAT*LVSGLR Trigger: CCTCAAGCCTGACACCAACAAAGTGGCCTTTGTCAG...CAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS TCA 90 bp | ACAGACGGCCTCTCTCGCGTGTGCTTGGAGGAGAAACTATATGAATaGAGTGAGCCAATGAACTTGCAAGCTCCAGATCCCGGAGGTGTG | + |
Preference number: 5 (lower is better) Translates to: TDGLSRVCLEEKLYE*SEPMNLQAPDPGGV Trigger: CACACCTCCGGGATCTGGAGCTTGCAAGTTCATTGGCTCACTTCATTCATATAGTTTCTCCTCCAAGCACACGCGAGAGAGGCCGTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS-3UTR CAA 90 bp | CCTAGAACAATTCAAGGCAGGATTCTGCCAAAATTCACTCTGGTTAACTGTAGCCCCTTGCCCTGCCTGTaGGAACAGTTCACGGCCGCG | + |
Preference number: 5 (lower is better) Translates to: PRTIQGRILPKFTLVNCSPLPCL*EQFTAA Trigger: CGCGGCCGTGAACTGTTCCAACAGGCAGGGCAAGGG...GCTACAGTTAACCAGAGTGAATTTTGGCAGAATCCTGCCTTGAATTGTTCTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR CAA 90 bp | TCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACAGGCTCTGGGAGCTCTCTCGCGTGTGCTaGGAGGAGAAACTATATGAA | + |
Preference number: 5 (lower is better) Translates to: SVSAEPVTTPCLPNRLWELSRVC*EEKLYE Trigger: TTCATATAGTTTCTCCTCCAAGCACACGCGAGAGAG...CTCCCAGAGCCTGTTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS-3UTR CAA 90 bp | GAGACAGCCATGTGGCTGACCTTATGGTCACACACAGGACTTCCAGGGAGAAGGTCTGGATGGAAGGAGTaGAACGAGAAGTTGAGCATA | + |
Preference number: 5 (lower is better) Translates to: ETAMWLTLWSHTGLPGRRSGWKE*NEKLSI Trigger: TATGCTCAACTTCTCGTTCAACTCCTTCCATCCAGA...CCTTCTCCCTGGAAGTCCTGTGTGTGACCATAAGGTCAGCCACATGGCTGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS-3UTR CAA 90 bp | CCTTCAGAATTCAGCCTGAATTTCCGAGTGATCTGCTCCACATGGGGCTCCTTGTTTCGGGACTCTGGCTaGGCCATCAAGTTATCACTT | + |
Preference number: 5 (lower is better) Translates to: PSEFSLNFRVICSTWGSLFRDSG*AIKLSL Trigger: AAGTGATAACTTGATGGCCAAGCCAGAGTCCCGAAA...CAAGGAGCCCCATGTGGAGCAGATCACTCGGAAATTCAGGCTGAATTCTGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR CAA 90 bp | CCTGGACAACACTTCAGTGTCAGCAGAGCCTGTGACCACACCATGTCTACCAAACACACTCTCTGTGCATaGGCTTGTGTGTTTCTGGAT | + |
Preference number: 5 (lower is better) Translates to: PGQHFSVSRACDHTMSTKHTLCA*ACVFLD Trigger: ATCCAGAAACACACAAGCCAATGCACAGAGAGTGTG...TTTGGTAGACATGGTGTGGTCACAGGCTCTGCTGACACTGAAGTGTTGTCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000189728.7 ENSMUST00000190116.7 |
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CDS-3UTR CAA 90 bp | GGCTCTGGGAGTGGCTCCAGGTTAAGGGGTCACCTTCTTGTAGGTAATGTGAAGTTGGAGAAGCTGTCTTaGGTAAAATGCTCACTACAG | + |
Preference number: 5 (lower is better) Translates to: GSGSGSRLRGHLLVGNVKLEKLS*VKCSLQ Trigger: CTGTAGTGAGCATTTTACCAAAGACAGCTTCTCCAA...CTTCACATTACCTACAAGAAGGTGACCCCTTAACCTGGAGCCACTCCCAGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR CAA 90 bp | CTACCAAACAGGCTCTGGGAGTGGCTCCAGGTTAAGGGGTCACCTTCTTGTAGGCCATCAAGTTATCACTaGAAGACAGTGAAGATCCTA | + |
Preference number: 5 (lower is better) Translates to: LPNRLWEWLQVKGSPSCRPSSYH*KTVKIL Trigger: TAGGATCTTCACTGTCTTCAAGTGATAACTTGATGG...CCTACAAGAAGGTGACCCCTTAACCTGGAGCCACTCCCAGAGCCTGTTTGGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112905.4 |
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CDS-3UTR CAA 90 bp | TCCGCATGCTCAGGTAACAGGTCACATCCTCAAATACAAACATTAACAACCAAGTCCACATGGGGCTCCTaGGCAAAGGAGATCCTGGAG | + |
Preference number: 5 (lower is better) Translates to: SACSGNRSHPQIQTLTTKSTWGS*AKEILE Trigger: CTCCAGGATCTCCTTTGCCAAGGAGCCCCATGTGGA...CTTGGTTGTTAATGTTTGTATTTGAGGATGTGACCTGTTACCTGAGCATGCGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187445.2 |
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CDS CCA 90 bp | CATCATCTTGTGGAGAAGCTCGCTTCAACTTTCGGGACTCTGGCTTaGCCATCAAGTTATCACTTGAAGACAGTGAAGATCCTATGGTTC | + |
Preference number: 5 (lower is better) Translates to: HHLVEKLASTFGTLA*PSSYHLKTVKILWF Trigger: GAACCATAGGATCTTCACTGTCTTCAAGTGATAACTTGATGGCCAAGCCAGAGTCCCGAAAGTTGAAGCGAGCTTCTCCACAAGATGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS TCA 90 bp | TCACTACAGAGGAATGAATACTTAGTCGGGGTCCAATTATCCCTCTaGACAGCTTTTAACCACTGGATCAGTCGTTTGGAGTCCTTTAGG | + |
Preference number: 5 (lower is better) Translates to: SLQRNEYLVGVQLSL*TAFNHWISRLESFR Trigger: CCTAAAGGACTCCAAACGACTGATCCAGTGGTTAAAAGCTGTTCAGAGGGATAATTGGACCCCGACTAAGTATTCATTCCTCTGTAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS-3UTR CAA 90 bp | GTGCCACCACCGCCTGGCTCTTCCTCTATATTTTTAAATGTATATGGCAGAAGCCCATCAAGTTATCACTaGAAGACAGTGAAGATCCTA | + |
Preference number: 5 (lower is better) Translates to: VPPPPGSSSIFLNVYGRSPSSYH*KTVKIL Trigger: TAGGATCTTCACTGTCTTCAAGTGATAACTTGATGG...GCTTCTGCCATATACATTTAAAAATATAGAGGAAGAGCCAGGCGGTGGTGGCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190116.7 |
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CDS GCA 72 bp | GGCCTTCTGGTGGTCAGCCTCTGTAGCAGACGCTTGTaGCTCTTCCTGGCCTCTGGCCAATGGGGCAGCCGG | + |
Preference number: 6 (lower is better) Translates to: GLLVVSLCSRRL*LFLASGQWGSR Trigger: CCGGCTGCCCCATTGGCCAGAGGCCAGGAAGAGGCACAAGCGTCTGCTACAGAGGCTGACCACCAGAAGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS GCA 72 bp | CTGTGGAAGGAGACAGCGCGTTTCTCGCCCTTGCCCTaGCTGTTGGAACAGTTCACGGCCGCGCAGCAGATC | + |
Preference number: 6 (lower is better) Translates to: LWKETARFSPLP*LLEQFTAAQQI Trigger: GATCTGCTGCGCGGCCGTGAACTGTTCCAACAGGCAGGGCAAGGGCGAGAAACGCGCTGTCTCCTTCCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS GCA 72 bp | GAAACCTGTGGAAGGAGACAGCGCGTTTCTCGCCCTTaGCCTGCCTGTTGGAACAGTTCACGGCCGCGCAGC | + |
Preference number: 6 (lower is better) Translates to: ETCGRRQRVSRP*PACWNSSRPRS Trigger: GCTGCGCGGCCGTGAACTGTTCCAACAGGCAGGGCAAGGGCGAGAAACGCGCTGTCTCCTTCCACAGGTTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS CCA 72 bp | TGGTCAGCCTCTGTAGCAGACGCTTGTGCCTCTTCCTaGCCTCTGGCCAATGGGGCAGCCGGGTCATCTCCT | + |
Preference number: 6 (lower is better) Translates to: WSASVADACASS*PLANGAAGSSP Trigger: AGGAGATGACCCGGCTGCCCCATTGGCCAGAGGCCAGGAAGAGGCACAAGCGTCTGCTACAGAGGCTGACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS CCA 72 bp | TCTGCCCCCTCAGCGTCGGTGGAGGAAGAGGCCTTCTaGTGGTCAGCCTCTGTAGCAGACGCTTGTGCCTCT | + |
Preference number: 6 (lower is better) Translates to: SAPSASVEEEAF*WSASVADACAS Trigger: AGAGGCACAAGCGTCTGCTACAGAGGCTGACCACCAGAAGGCCTCTTCCTCCACCGACGCTGAGGGGGCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS CAA 72 bp | GGAAACCTGTGGAAGGAGACAGCGCGTTTCTCGCCCTaGCCCTGCCTGTTGGAACAGTTCACGGCCGCGCAG | + |
Preference number: 6 (lower is better) Translates to: GNLWKETARFSP*PCLLEQFTAAQ Trigger: CTGCGCGGCCGTGAACTGTTCCAACAGGCAGGGCAAGGGCGAGAAACGCGCTGTCTCCTTCCACAGGTTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS CAA 72 bp | CCCGGAGGTGTGAAGTCGTCCATAGAAATGCCGCTCTaGTCTGCCCCCTCAGCGTCGGTGGAGGAAGAGGCC | + |
Preference number: 6 (lower is better) Translates to: PGGVKSSIEMPL*SAPSASVEEEA Trigger: GGCCTCTTCCTCCACCGACGCTGAGGGGGCAGACAAGAGCGGCATTTCTATGGACGACTTCACACCTCCGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS CAA 90 bp | GCTCCAGATCCCGGAGGTGTGAAGTCGTCCATAGAAATGCCGCTCTaGTCTGCCCCCTCAGCGTCGGTGGAGGAAGAGGCCTTCTGGTGG | + |
Preference number: 6 (lower is better) Translates to: APDPGGVKSSIEMPL*SAPSASVEEEAFWW Trigger: CCACCAGAAGGCCTCTTCCTCCACCGACGCTGAGGGGGCAGACAAGAGCGGCATTTCTATGGACGACTTCACACCTCCGGGATCTGGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS CAA 90 bp | TCCTTTAGGGGAAACCTGTGGAAGGAGACAGCGCGTTTCTCGCCCTaGCCCTGCCTGTTGGAACAGTTCACGGCCGCGCAGCAGATCACC | + |
Preference number: 6 (lower is better) Translates to: SFRGNLWKETARFSP*PCLLEQFTAAQQIT Trigger: GGTGATCTGCTGCGCGGCCGTGAACTGTTCCAACAGGCAGGGCAAGGGCGAGAAACGCGCTGTCTCCTTCCACAGGTTTCCCCTAAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS CAA 90 bp | CTCCTGGCTGACAGCACCTGGGGTGACCTTGGGGGCTGCATCATCTaGTGGAGAAGCTCGCTTCAACTTTCGGGACTCTGGCTTGGCCAT | + |
Preference number: 6 (lower is better) Translates to: LLADSTWGDLGGCII*WRSSLQLSGLWLGH Trigger: ATGGCCAAGCCAGAGTCCCGAAAGTTGAAGCGAGCTTCTCCACAAGATGATGCAGCCCCCAAGGTCACCCCAGGTGCTGTCAGCCAGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS CAA 90 bp | GAGTCGATGAGCTTGCAGGCCCCCGAGGCCGACAGAATGACCTCGTaGATGGACATGGGACTGGCATCACTATGCTCACTCTGCACGGCT | + |
Preference number: 6 (lower is better) Translates to: ESMSLQAPEADRMTS*MDMGLASLCSLCTA Trigger: AGCCGTGCAGAGTGAGCATAGTGATGCCAGTCCCATGTCCATCAACGAGGTCATTCTGTCGGCCTCGGGGGCCTGCAAGCTCATCGACTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS GCA 72 bp | AGGTGTGAAGTCGTCCATAGAAATGCCGCTCTTGTCTaGCCCCTCAGCGTCGGTGGAGGAAGAGGCCTTCTG | + |
Preference number: 6 (lower is better) Translates to: RCEVVHRNAALV*PLSVGGGRGLL Trigger: CAGAAGGCCTCTTCCTCCACCGACGCTGAGGGGGCAGACAAGAGCGGCATTTCTATGGACGACTTCACACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS GCA 72 bp | GGGACTGGCATCACTATGCTCACTCTGCACGGCTTCTaGTGCTGGCTTAGGGGTTACATCAGTTGGAGGGGC | + |
Preference number: 6 (lower is better) Translates to: GTGITMLTLHGF*CWLRGYISWRG Trigger: GCCCCTCCAACTGATGTAACCCCTAAGCCAGCAGCAGAAGCCGTGCAGAGTGAGCATAGTGATGCCAGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS CAA 72 bp | GACAGCACCTGGGGTGACCTTGGGGGCTGCATCATCTaGTGGAGAAGCTCGCTTCAACTTTCGGGACTCTGG | + |
Preference number: 6 (lower is better) Translates to: DSTWGDLGGCII*WRSSLQLSGLW Trigger: CCAGAGTCCCGAAAGTTGAAGCGAGCTTCTCCACAAGATGATGCAGCCCCCAAGGTCACCCCAGGTGCTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS CAA 72 bp | AGCTTGCAGGCCCCCGAGGCCGACAGAATGACCTCGTaGATGGACATGGGACTGGCATCACTATGCTCACTC | + |
Preference number: 6 (lower is better) Translates to: SLQAPEADRMTS*MDMGLASLCSL Trigger: GAGTGAGCATAGTGATGCCAGTCCCATGTCCATCAACGAGGTCATTCTGTCGGCCTCGGGGGCCTGCAAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS GCA 72 bp | ACTGGCATCACTATGCTCACTCTGCACGGCTTCTGCTaGTGGCTTAGGGGTTACATCAGTTGGAGGGGCGGA | + |
Preference number: 6 (lower is better) Translates to: TGITMLTLHGFC*WLRGYISWRGG Trigger: TCCGCCCCTCCAACTGATGTAACCCCTAAGCCAGCAGCAGAAGCCGTGCAGAGTGAGCATAGTGATGCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS CCA 72 bp | AGCACCTGGGGTGACCTTGGGGGCTGCATCATCTTGTaGAGAAGCTCGCTTCAACTTTCGGGACTCTGGCTT | + |
Preference number: 6 (lower is better) Translates to: STWGDLGGCIIL*RSSLQLSGLWL Trigger: AAGCCAGAGTCCCGAAAGTTGAAGCGAGCTTCTCCACAAGATGATGCAGCCCCCAAGGTCACCCCAGGTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS GCA 72 bp | AGGAACTTGGGGGACTCTGGGCCACACTATTCCCACTaGACCTTGGCTCCATCTCTCTCTTCAGCCTCTTTC | + |
Preference number: 6 (lower is better) Translates to: RNLGDSGPHYSH*TLAPSLSSASF Trigger: GAAAGAGGCTGAAGAGAGAGATGGAGCCAAGGTGCAGTGGGAATAGTGTGGCCCAGAGTCCCCCAAGTTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS CCA 72 bp | ATAGAGGGTACAGCCGTGGGCTTCAGCAGGCGATGCTaGTCCTCCAGTCTTTTGGAGAAGCTGTCTTTGGTA | + |
Preference number: 6 (lower is better) Translates to: IEGTAVGFSRRC*SSSLLEKLSLV Trigger: TACCAAAGACAGCTTCTCCAAAAGACTGGAGGACCAGCATCGCCTGCTGAAGCCCACGGCTGTACCCTCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS GCA 72 bp | AAAATAGAGGGTACAGCCGTGGGCTTCAGCAGGCGATaGTGGTCCTCCAGTCTTTTGGAGAAGCTGTCTTTG | + |
Preference number: 6 (lower is better) Translates to: KIEGTAVGFSRR*WSSSLLEKLSL Trigger: CAAAGACAGCTTCTCCAAAAGACTGGAGGACCAGCATCGCCTGCTGAAGCCCACGGCTGTACCCTCTATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS GCA 72 bp | TTGATGGACATGGGACTGGCATCACTATGCTCACTCTaGACGGCTTCTGCTGCTGGCTTAGGGGTTACATCA | + |
Preference number: 6 (lower is better) Translates to: LMDMGLASLCSL*TASAAGLGVTS Trigger: TGATGTAACCCCTAAGCCAGCAGCAGAAGCCGTGCAGAGTGAGCATAGTGATGCCAGTCCCATGTCCATCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS CAA 90 bp | CTCGCTTCAACTTTCGGGACTCTGGCTTGGCCATCAAGTTATCACTaGAAGACAGTGAAGATCCTATGGTTCCTTTCCCTGTCTCTGCGC | + |
Preference number: 6 (lower is better) Translates to: LASTFGTLAWPSSYH*KTVKILWFLSLSLR Trigger: GCGCAGAGACAGGGAAAGGAACCATAGGATCTTCACTGTCTTCAAGTGATAACTTGATGGCCAAGCCAGAGTCCCGAAAGTTGAAGCGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS CCA 72 bp | CCCTCTGAACAGCTTTTAACCACTGGATCAGTCGTTTaGAGTCCTTTAGGGGAAACCTGTGGAAGGAGACAG | + |
Preference number: 6 (lower is better) Translates to: PSEQLLTTGSVV*SPLGETCGRRQ Trigger: CTGTCTCCTTCCACAGGTTTCCCCTAAAGGACTCCAAACGACTGATCCAGTGGTTAAAAGCTGTTCAGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS CCA 72 bp | CCATCAAGTTATCACTTGAAGACAGTGAAGATCCTATaGTTCCTTTCCCTGTCTCTGCGCTTGTGTGGCCCC | + |
Preference number: 6 (lower is better) Translates to: PSSYHLKTVKIL*FLSLSLRLCGP Trigger: GGGGCCACACAAGCGCAGAGACAGGGAAAGGAACCATAGGATCTTCACTGTCTTCAAGTGATAACTTGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS TCA 72 bp | CTCTCTCGCGTGTGCTTGGAGGAGAAACTATATGAATaGAGTGAGCCAATGAACTTGCAAGCTCCAGATCCC | + |
Preference number: 6 (lower is better) Translates to: LSRVCLEEKLYE*SEPMNLQAPDP Trigger: GGGATCTGGAGCTTGCAAGTTCATTGGCTCACTTCATTCATATAGTTTCTCCTCCAAGCACACGCGAGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS CAA 90 bp | GCATCATCTTGTGGAGAAGCTCGCTTCAACTTTCGGGACTCTGGCTaGGCCATCAAGTTATCACTTGAAGACAGTGAAGATCCTATGGTT | + |
Preference number: 6 (lower is better) Translates to: ASSCGEARFNFRDSG*AIKLSLEDSEDPMV Trigger: AACCATAGGATCTTCACTGTCTTCAAGTGATAACTTGATGGCCAAGCCAGAGTCCCGAAAGTTGAAGCGAGCTTCTCCACAAGATGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS CAA 72 bp | TGTGGAGAAGCTCGCTTCAACTTTCGGGACTCTGGCTaGGCCATCAAGTTATCACTTGAAGACAGTGAAGAT | + |
Preference number: 6 (lower is better) Translates to: CGEARFNFRDSG*AIKLSLEDSED Trigger: ATCTTCACTGTCTTCAAGTGATAACTTGATGGCCAAGCCAGAGTCCCGAAAGTTGAAGCGAGCTTCTCCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS TCA 72 bp | AGGAATGAATACTTAGTCGGGGTCCAATTATCCCTCTaGACAGCTTTTAACCACTGGATCAGTCGTTTGGAG | + |
Preference number: 6 (lower is better) Translates to: RNEYLVGVQLSL*TAFNHWISRLE Trigger: CTCCAAACGACTGATCCAGTGGTTAAAAGCTGTTCAGAGGGATAATTGGACCCCGACTAAGTATTCATTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS TCA 72 bp | GAAGCTGTCTTTGGTAAAATGCTCACTACAGAGGAATaGATACTTAGTCGGGGTCCAATTATCCCTCTGAAC | + |
Preference number: 6 (lower is better) Translates to: EAVFGKMLTTEE*ILSRGPIIPLN Trigger: GTTCAGAGGGATAATTGGACCCCGACTAAGTATTCATTCCTCTGTAGTGAGCATTTTACCAAAGACAGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |
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CDS CAA 72 bp | CGATGCTGGTCCTCCAGTCTTTTGGAGAAGCTGTCTTaGGTAAAATGCTCACTACAGAGGAATGAATACTTA | + |
Preference number: 6 (lower is better) Translates to: RCWSSSLLEKLS*VKCSLQRNEYL Trigger: TAAGTATTCATTCCTCTGTAGTGAGCATTTTACCAAAGACAGCTTCTCCAAAAGACTGGAGGACCAGCATCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112905.4 ENSMUST00000190116.7 |