Pregenerated sensors for THAP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039759Ensembl transcript IDs: ENSMUST00000036680.8, ENSMUST00000105665.3
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCTGGGACGGTGCCTCCGCAGTACTTGGGCCCCCACCCGACAACTaGCTGTCGCAGCATCCCATCCCACTCTCAAGGCACCTGCAGCAT | + |
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Preference number: 1 (lower is better) Translates to: TWDGASAVLGPPPDN*LSQHPIPLSRHLQH Trigger: ATGCTGCAGGTGCCTTGAGAGTGGGATGGGATGCTGCGACAGGCAGTTGTCGGGTGGGGGCCCAAGTACTGCGGAGGCACCGTCCCAGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| 3UTR GCA 90 bp | TGCTTCCCCACAGCTGACAGCCTCAGCCCAAGAAACCTGGGACGGTaGCTCCGCAGTACTTGGGCCCCCACCCGACAACTGCCTGTCGCA | + |
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Preference number: 1 (lower is better) Translates to: CFPTADSLSPRNLGR*LRSTWAPTRQLPVA Trigger: TGCGACAGGCAGTTGTCGGGTGGGGGCCCAAGTACTGCGGAGGCACCGTCCCAGGTTTCTTGGGCTGAGGCTGTCAGCTGTGGGGAAGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| 3UTR CCA 90 bp | GTCACTGCTGCTTCCCCACAGCTGACAGCCTCAGCCCAAGAAACCTaGGACGGTGCCTCCGCAGTACTTGGGCCCCCACCCGACAACTGC | + |
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Preference number: 1 (lower is better) Translates to: VTAASPQLTASAQET*DGASAVLGPPPDNC Trigger: GCAGTTGTCGGGTGGGGGCCCAAGTACTGCGGAGGCACCGTCCCAGGTTTCTTGGGCTGAGGCTGTCAGCTGTGGGGAAGCAGCAGTGAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| 3UTR CCA 72 bp | GCTTCCCCACAGCTGACAGCCTCAGCCCAAGAAACCTaGGACGGTGCCTCCGCAGTACTTGGGCCCCCACCC | + |
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Preference number: 3 (lower is better) Translates to: ASPQLTASAQET*DGASAVLGPPP Trigger: GGGTGGGGGCCCAAGTACTGCGGAGGCACCGTCCCAGGTTTCTTGGGCTGAGGCTGTCAGCTGTGGGGAAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| 3UTR GCA 72 bp | GGTGCCTCCGCAGTACTTGGGCCCCCACCCGACAACTaGCTGTCGCAGCATCCCATCCCACTCTCAAGGCAC | + |
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Preference number: 3 (lower is better) Translates to: GASAVLGPPPDN*LSQHPIPLSRH Trigger: GTGCCTTGAGAGTGGGATGGGATGCTGCGACAGGCAGTTGTCGGGTGGGGGCCCAAGTACTGCGGAGGCACC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| 3UTR CCA 72 bp | AGCCCAAGAAACCTGGGACGGTGCCTCCGCAGTACTTaGGCCCCCACCCGACAACTGCCTGTCGCAGCATCC | + |
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Preference number: 3 (lower is better) Translates to: SPRNLGRCLRST*APTRQLPVAAS Trigger: GGATGCTGCGACAGGCAGTTGTCGGGTGGGGGCCCAAGTACTGCGGAGGCACCGTCCCAGGTTTCTTGGGCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| 3UTR GCA 72 bp | ACAGCTGACAGCCTCAGCCCAAGAAACCTGGGACGGTaGCTCCGCAGTACTTGGGCCCCCACCCGACAACTG | + |
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Preference number: 3 (lower is better) Translates to: TADSLSPRNLGR*LRSTWAPTRQL Trigger: CAGTTGTCGGGTGGGGGCCCAAGTACTGCGGAGGCACCGTCCCAGGTTTCTTGGGCTGAGGCTGTCAGCTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| 3UTR GCA 72 bp | TCAGAAATACAGGCTGACGGGGACCCTTGCCCTGCCTaGCATCAGAATGGCTCCTATGGGGAGACAGTAAGG | + |
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Preference number: 3 (lower is better) Translates to: SEIQADGDPCPA*HQNGSYGETVR Trigger: CCTTACTGTCTCCCCATAGGAGCCATTCTGATGGCAGGCAGGGCAAGGGTCCCCGTCAGCCTGTATTTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036680.8 |
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| 3UTR TCA 72 bp | AACCAGGCAGAAAAAGAGTCACTCAGAAATACAGGCTaGCGGGGACCCTTGCCCTGCCTGCCATCAGAATGG | + |
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Preference number: 3 (lower is better) Translates to: NQAEKESLRNTG*RGPLPCLPSEW Trigger: CCATTCTGATGGCAGGCAGGGCAAGGGTCCCCGTCAGCCTGTATTTCTGAGTGACTCTTTTTCTGCCTGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036680.8 |
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| CDS-3UTR CCA 90 bp | ACTGCTGCTTCCCCACAGCTGACAGCCTCAGCCCAAGAAACCTGGGACGGTGCCCCTGTGCCGGCCGTCTaGCCCGAGGTCCCGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: TAASPQLTASAQETWDGAPVPAV*PEVPAV Trigger: GACAGCCGGGACCTCGGGCCAGACGGCCGGCACAGG...GGCACCGTCCCAGGTTTCTTGGGCTGAGGCTGTCAGCTGTGGGGAAGCAGCAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS-3UTR CCA 90 bp | GCCCCCACCCGACAACTGCCTGTCGCAGCATCCCATCCCACTCTCAAGGCACCTTCAACCCCAGAGGGCTaGCAGGCAGGCCAGCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: APTRQLPVAASHPTLKAPSTPEG*QAGQRP Trigger: AGGCCGCTGGCCTGCCTGCCAGCCCTCTGGGGTTGA...AGGTGCCTTGAGAGTGGGATGGGATGCTGCGACAGGCAGTTGTCGGGTGGGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS-3UTR CCA 90 bp | CCCGACAACTGCCTGTCGCAGCATCCCATCCCACTCTCAAGGCACCTGCAGCATCCTGTGCCGGCCGTCTaGCCCGAGGTCCCGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: PDNCLSQHPIPLSRHLQHPVPAV*PEVPAV Trigger: GACAGCCGGGACCTCGGGCCAGACGGCCGGCACAGG...ATGCTGCAGGTGCCTTGAGAGTGGGATGGGATGCTGCGACAGGCAGTTGTCGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS-3UTR TCA 90 bp | TGCTTCCCCACAGCTGACAGCCTCAGCCCAAGAAACCTGGGACGGTGCCTCCGCCAGCCCGGCCGATGTTaGGCACCCACTCCCTCAACA | + |
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Preference number: 4 (lower is better) Translates to: CFPTADSLSPRNLGRCLRQPGRC*APTPST Trigger: TGTTGAGGGAGTGGGTGCTCAACATCGGCCGGGCTG...GCGGAGGCACCGTCCCAGGTTTCTTGGGCTGAGGCTGTCAGCTGTGGGGAAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS-3UTR CCA 90 bp | CCCACTCTCAAGGCACCTGCAGCATCAGCAGCGGGTAGAAACGCCCATAGCAGGTCAACCCCAGAGGGCTaGCAGGCAGGCCAGCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PTLKAPAASAAGRNAHSRSTPEG*QAGQRP Trigger: AGGCCGCTGGCCTGCCTGCCAGCCCTCTGGGGTTGA...CCTGCTATGGGCGTTTCTACCCGCTGCTGATGCTGCAGGTGCCTTGAGAGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS-3UTR CCA 90 bp | GCTGACAGCCTCAGCCCAAGAAACCTGGGACGGTGCCTCCGCAGTACTTGGGCCGGGGCCTTCCGGGGTTaGAGGCTGAAGTTCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: ADSLSPRNLGRCLRSTWAGAFRG*RLKFFQ Trigger: CTGGAAGAACTTCAGCCTCCAACCCCGGAAGGCCCC...GGCCCAAGTACTGCGGAGGCACCGTCCCAGGTTTCTTGGGCTGAGGCTGTCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036680.8 |
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| CDS-3UTR TCA 90 bp | GACCCTTGCCCTGCCTGCCATCAGAATGGCTCCTATGGGGAGACAGTAAGGACCCAGCCCGGCCGATGTTaGGCACCCACTCCCTCAACA | + |
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Preference number: 4 (lower is better) Translates to: DPCPACHQNGSYGETVRTQPGRC*APTPST Trigger: TGTTGAGGGAGTGGGTGCTCAACATCGGCCGGGCTG...GGTCCTTACTGTCTCCCCATAGGAGCCATTCTGATGGCAGGCAGGGCAAGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036680.8 |
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| CDS-3UTR TCA 90 bp | GAAATACAGGCTGACGGGGACCCTTGCCCTGCCTGCCATCAGAATGGCTCCTATGTCCATGTTCCTCCCTaGGCTGTCCCCACCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: EIQADGDPCPACHQNGSYVHVPP*AVPTSP Trigger: GGGGCTGGTGGGGACAGCTCAGGGAGGAACATGGAC...ATAGGAGCCATTCTGATGGCAGGCAGGGCAAGGGTCCCCGTCAGCCTGTATTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036680.8 |
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| CDS-3UTR GCA 90 bp | CCCACTCTCAAGGCACCTGCAGCATCAGCAGCGGGTAGAAACGCCCATAGCAGGTCTGGTAAGACCTGCTaGACGGGGCCTTCCGGGGTT | + |
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Preference number: 4 (lower is better) Translates to: PTLKAPAASAAGRNAHSRSGKTC*TGPSGV Trigger: AACCCCGGAAGGCCCCGTGCAGCAGGTCTTACCAGA...CCTGCTATGGGCGTTTCTACCCGCTGCTGATGCTGCAGGTGCCTTGAGAGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036680.8 |
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| CDS-3UTR CCA 90 bp | CTGACGGGGACCCTTGCCCTGCCTGCCATCAGAATGGCTCCTATGGGGAGACAGCTGAAGGGGAACCGGTaGAAGGTGAGCTGCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LTGTLALPAIRMAPMGRQLKGNR*KVSCFL Trigger: CAGGAAGCAGCTCACCTTCCACCGGTTCCCCTTCAG...CTGTCTCCCCATAGGAGCCATTCTGATGGCAGGCAGGGCAAGGGTCCCCGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000036680.8 |
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| CDS-3UTR CCA 90 bp | GACAACTGCCTGTCGCAGCATCCCATCCCACTCTCAAGGCACCTGCAGCATCAGCGCAACAGCAGCCTCTaGGCTTTCAGCCGCTTCCGA | + |
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Preference number: 4 (lower is better) Translates to: DNCLSQHPIPLSRHLQHQRNSSL*AFSRFR Trigger: TCGGAAGCGGCTGAAAGCCCAGAGGCTGCTGTTGCG...CTGATGCTGCAGGTGCCTTGAGAGTGGGATGGGATGCTGCGACAGGCAGTTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS-3UTR TCA 90 bp | GACCCTTGCCCTGCCTGCCATCAGAATGGCTCCTATGGGGAGACAGTAAGGACCTCCGGGGTTGGAGGCTaGAGTTCTTCCAGTGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: DPCPACHQNGSYGETVRTSGVGG*SSSSVV Trigger: CACCACACTGGAAGAACTTCAGCCTCCAACCCCGGA...GGTCCTTACTGTCTCCCCATAGGAGCCATTCTGATGGCAGGCAGGGCAAGGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036680.8 |
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| CDS-3UTR CCA 90 bp | AAGGCACCTGCAGCATCAGCAGCGGGTAGAAACGCCCATAGCAGGCCAGAACACCTGAAGGGGAACCGGTaGAAGGTGAGCTGCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: KAPAASAAGRNAHSRPEHLKGNR*KVSCFL Trigger: CAGGAAGCAGCTCACCTTCCACCGGTTCCCCTTCAG...GTGTTCTGGCCTGCTATGGGCGTTTCTACCCGCTGCTGATGCTGCAGGTGCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS-3UTR CCA 90 bp | CCACTCTCAAGGCACCTGCAGCATCAGCAGCGGGTAGAAACGCCCATAGCAGGCCAGGGCAGACCTCTGTaGGGTTCTGAAAAGCGAACA | + |
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Preference number: 4 (lower is better) Translates to: PLSRHLQHQQRVETPIAGQGRPL*GSEKRT Trigger: TGTTCGCTTTTCAGAACCCCACAGAGGTCTGCCCTG...GCCTGCTATGGGCGTTTCTACCCGCTGCTGATGCTGCAGGTGCCTTGAGAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036680.8 |
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| CDS-3UTR CCA 90 bp | AGAAAAAGAGTCACTCAGAAATACAGGCTGACGGGGACCCTTGCCCTGCCTGCCCGCAACAGCAGCCTCTaGGCTTTCAGCCGCTTCCGA | + |
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Preference number: 4 (lower is better) Translates to: RKRVTQKYRLTGTLALPARNSSL*AFSRFR Trigger: TCGGAAGCGGCTGAAAGCCCAGAGGCTGCTGTTGCG...GGCAGGCAGGGCAAGGGTCCCCGTCAGCCTGTATTTCTGAGTGACTCTTTTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036680.8 |
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| CDS-3UTR CCA 90 bp | CCCGACAACTGCCTGTCGCAGCATCCCATCCCACTCTCAAGGCACCTGCAGCATGAAAAGCGAACACCGTaGGCACAGCATTGTGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: PDNCLSQHPIPLSRHLQHEKRTP*AQHCVS Trigger: TGAAACACAATGCTGTGCCCACGGTGTTCGCTTTTC...ATGCTGCAGGTGCCTTGAGAGTGGGATGGGATGCTGCGACAGGCAGTTGTCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS-3UTR GCA 90 bp | ATCCCACTCTCAAGGCACCTGCAGCATCAGCAGCGGGTAGAAACGCCCATAGCACAGATGACTGTGTGCTaGTTAGGCTTGAAGTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: IPLSRHLQHQQRVETPIAQMTVC*LGLKSA Trigger: GGCTGACTTCAAGCCTAAGCAGCACACAGTCATCTG...TGCTATGGGCGTTTCTACCCGCTGCTGATGCTGCAGGTGCCTTGAGAGTGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS-3UTR CCA 90 bp | CCAGAACACCACTTCCTGCTAAGGTGTTGCCACCACCCCCACATCCCAGAGCTTGAAAAGCGAACACCGTaGGCACAGCATTGTGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: PEHHFLLRCCHHPHIPELEKRTP*AQHCVS Trigger: TGAAACACAATGCTGTGCCCACGGTGTTCGCTTTTC...AAGCTCTGGGATGTGGGGGTGGTGGCAACACCTTAGCAGGAAGTGGTGTTCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS-3UTR CCA 90 bp | TCTCTTGAGGGGGTTGTGACGGCTCACATTTGGTCACTGCTGCTTCCCCACAGCCTGGTAAGACCTCTGTaGGGTTCTGAAAAGCGAACA | + |
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Preference number: 4 (lower is better) Translates to: SLEGVVTAHIWSLLLPHSLVRPL*GSEKRT Trigger: TGTTCGCTTTTCAGAACCCCACAGAGGTCTTACCAG...GCTGTGGGGAAGCAGCAGTGACCAAATGTGAGCCGTCACAACCCCCTCAAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105665.3 |
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| CDS-3UTR GCA 90 bp | GATTTATTCCACATCTACACGAACCAGGCAGAAAAAGAGTCACTCAGAAATACACAGATGACTGTGTGCTaGTTAGGCTTGAAGTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: DLFHIYTNQAEKESLRNTQMTVC*LGLKSA Trigger: GGCTGACTTCAAGCCTAAGCAGCACACAGTCATCTG...TGTATTTCTGAGTGACTCTTTTTCTGCCTGGTTCGTGTAGATGTGGAATAAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036680.8 |
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| CDS CCA 90 bp | GATCAGACGGCTGTCCCGGAAGGGGCCTCTTCAACCCCAGAGGGCTaGCAGGCAGGCCAGCGGCCTCCGTGGCCTCCATTGCTTCTCGAT | + |
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Preference number: 5 (lower is better) Translates to: DQTAVPEGASSTPEG*QAGQRPPWPPLLLD Trigger: ATCGAGAAGCAATGGAGGCCACGGAGGCCGCTGGCCTGCCTGCCAGCCCTCTGGGGTTGAAGAGGCCCCTTCCGGGACAGCCGTCTGATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS-3UTR CAA 90 bp | GCCCCCACCCGACAACTGCCTGTCGCAGCATCCCATCCCACTCTCAAGGCACCTGTGTGCTGCTTAGGCTaGAAGTCAGCCCGGCCGATG | + |
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Preference number: 5 (lower is better) Translates to: APTRQLPVAASHPTLKAPVCCLG*KSARPM Trigger: CATCGGCCGGGCTGACTTCAAGCCTAAGCAGCACAC...AGGTGCCTTGAGAGTGGGATGGGATGCTGCGACAGGCAGTTGTCGGGTGGGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS-3UTR CAA 90 bp | GCACCTGCAGCATCAGCAGCGGGTAGAAACGCCCATAGCAGGCCAGAACACCACTCAGCCCGGCCGATGTaGAGCACCCACTCCCTCAAC | + |
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Preference number: 5 (lower is better) Translates to: APAASAAGRNAHSRPEHHSARPM*STHSLN Trigger: GTTGAGGGAGTGGGTGCTCAACATCGGCCGGGCTGA...GTGGTGTTCTGGCCTGCTATGGGCGTTTCTACCCGCTGCTGATGCTGCAGGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS-3UTR CAA 90 bp | GGGCCCCCACCCGACAACTGCCTGTCGCAGCATCCCATCCCACTCTCAAGGCACTTGTGTTTCAGGTTCTaGCGGTTCCCAAAGGCGCTG | + |
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Preference number: 5 (lower is better) Translates to: GPPPDNCLSQHPIPLSRHLCFRF*RFPKAL Trigger: CAGCGCCTTTGGGAACCGCAAGAACCTGAAACACAA...GTGCCTTGAGAGTGGGATGGGATGCTGCGACAGGCAGTTGTCGGGTGGGGGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS-3UTR CAA 90 bp | CACTCAGAAATACAGGCTGACGGGGACCCTTGCCCTGCCTGCCATCAGAATGGCGTGTGCTGCTTAGGCTaGAAGTCAGCCCGGCCGATG | + |
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Preference number: 5 (lower is better) Translates to: HSEIQADGDPCPACHQNGVCCLG*KSARPM Trigger: CATCGGCCGGGCTGACTTCAAGCCTAAGCAGCACAC...GCCATTCTGATGGCAGGCAGGGCAAGGGTCCCCGTCAGCCTGTATTTCTGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036680.8 |
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| CDS-3UTR CAA 90 bp | CCTGTCGCAGCATCCCATCCCACTCTCAAGGCACCTGCAGCATCAGCAGCGGGTACCGTGGGCACAGCATaGTGTTTCAGGTTCTTGCGG | + |
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Preference number: 5 (lower is better) Translates to: PVAASHPTLKAPAASAAGTVGTA*CFRFLR Trigger: CCGCAAGAACCTGAAACACAATGCTGTGCCCACGGT...ACCCGCTGCTGATGCTGCAGGTGCCTTGAGAGTGGGATGGGATGCTGCGACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS-3UTR CAA 90 bp | ACTGCTGCTTCCCCACAGCTGACAGCCTCAGCCCAAGAAACCTGGGACGGTGCCCCTCCGTGGCCTCCATaGCTTCTCGATCTGGTAAGA | + |
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Preference number: 5 (lower is better) Translates to: TAASPQLTASAQETWDGAPPWPP*LLDLVR Trigger: TCTTACCAGATCGAGAAGCAATGGAGGCCACGGAGG...GGCACCGTCCCAGGTTTCTTGGGCTGAGGCTGTCAGCTGTGGGGAAGCAGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS GCA 90 bp | GCGCTGAAGCACTCGGGTCTGAAGTGTTCCGAGCAGATGACTGTGTaGTGCTTAGGCTTGAAGTCAGCCCGGCCGATGTTGAGCACCCAC | + |
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Preference number: 5 (lower is better) Translates to: ALKHSGLKCSEQMTV*CLGLKSARPMLSTH Trigger: GTGGGTGCTCAACATCGGCCGGGCTGACTTCAAGCCTAAGCAGCACACAGTCATCTGCTCGGAACACTTCAGACCCGAGTGCTTCAGCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS GCA 90 bp | CTGAAGCACTCGGGTCTGAAGTGTTCCGAGCAGATGACTGTGTGCTaGTTAGGCTTGAAGTCAGCCCGGCCGATGTTGAGCACCCACTCC | + |
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Preference number: 5 (lower is better) Translates to: LKHSGLKCSEQMTVC*LGLKSARPMLSTHS Trigger: GGAGTGGGTGCTCAACATCGGCCGGGCTGACTTCAAGCCTAAGCAGCACACAGTCATCTGCTCGGAACACTTCAGACCCGAGTGCTTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS CCA 90 bp | CCACCTCAGGGCAGACCTCTGTGGGGTTCTGAAAAGCGAACACCGTaGGCACAGCATTGTGTTTCAGGTTCTTGCGGTTCCCAAAGGCGC | + |
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Preference number: 5 (lower is better) Translates to: PPQGRPLWGSEKRTP*AQHCVSGSCGSQRR Trigger: GCGCCTTTGGGAACCGCAAGAACCTGAAACACAATGCTGTGCCCACGGTGTTCGCTTTTCAGAACCCCACAGAGGTCTGCCCTGAGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036680.8 |
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| CDS-3UTR CAA 90 bp | GACAACTGCCTGTCGCAGCATCCCATCCCACTCTCAAGGCACCTGCAGCATCAGACCGTGGGCACAGCATaGTGTTTCAGGTTCTTGCGG | + |
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Preference number: 5 (lower is better) Translates to: DNCLSQHPIPLSRHLQHQTVGTA*CFRFLR Trigger: CCGCAAGAACCTGAAACACAATGCTGTGCCCACGGT...CTGATGCTGCAGGTGCCTTGAGAGTGGGATGGGATGCTGCGACAGGCAGTTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS-3UTR CAA 90 bp | AGGCACCTGCAGCATCAGCAGCGGGTAGAAACGCCCATAGCAGGCCAGAACACCCGCTTCCGAAGCCTCTaGTTTTCCTTCAGTGTGAGA | + |
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Preference number: 5 (lower is better) Translates to: RHLQHQQRVETPIAGQNTRFRSL*FSFSVR Trigger: TCTCACACTGAAGGAAAACAAGAGGCTTCGGAAGCG...GGTGTTCTGGCCTGCTATGGGCGTTTCTACCCGCTGCTGATGCTGCAGGTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS CCA 90 bp | CGGCCTCCGTGGCCTCCATTGCTTCTCGATCTGGTAAGACCTCTGTaGGGTTCTGAAAAGCGAACACCGTGGGCACAGCATTGTGTTTCA | + |
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Preference number: 5 (lower is better) Translates to: RPPWPPLLLDLVRPL*GSEKRTPWAQHCVS Trigger: TGAAACACAATGCTGTGCCCACGGTGTTCGCTTTTCAGAACCCCACAGAGGTCTTACCAGATCGAGAAGCAATGGAGGCCACGGAGGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105665.3 |
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| CDS-3UTR CAA 90 bp | CCTGCAGCATCAGCAGCGGGTAGAAACGCCCATAGCAGGCCAGAACACCACTTCCGCTTCCGAAGCCTCTaGTTTTCCTTCAGTGTGAGA | + |
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Preference number: 5 (lower is better) Translates to: PAASAAGRNAHSRPEHHFRFRSL*FSFSVR Trigger: TCTCACACTGAAGGAAAACAAGAGGCTTCGGAAGCG...GAAGTGGTGTTCTGGCCTGCTATGGGCGTTTCTACCCGCTGCTGATGCTGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS CCA 90 bp | CTCGATCTGGTAAGACCTCTGTGGGGTTCTGAAAAGCGAACACCGTaGGCACAGCATTGTGTTTCAGGTTCTTGCGGTTCCCAAAGGCGC | + |
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Preference number: 5 (lower is better) Translates to: LDLVRPLWGSEKRTP*AQHCVSGSCGSQRR Trigger: GCGCCTTTGGGAACCGCAAGAACCTGAAACACAATGCTGTGCCCACGGTGTTCGCTTTTCAGAACCCCACAGAGGTCTTACCAGATCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105665.3 |
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| CDS-3UTR CAA 90 bp | ACACGAACCAGGCAGAAAAAGAGTCACTCAGAAATACAGGCTGACGGGGACCCTCCTCCGTGGCCTCCATaGCTTCTCGATCTGGTAAGA | + |
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Preference number: 5 (lower is better) Translates to: TRTRQKKSHSEIQADGDPPPWPP*LLDLVR Trigger: TCTTACCAGATCGAGAAGCAATGGAGGCCACGGAGG...AGGGTCCCCGTCAGCCTGTATTTCTGAGTGACTCTTTTTCTGCCTGGTTCGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036680.8 |
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| CDS TCA 90 bp | GTGGCCTCCATTGCTTCTCGATCTGGTAAGACCTCTGTGGGGTTCTaGAAAGCGAACACCGTGGGCACAGCATTGTGTTTCAGGTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: VASIASRSGKTSVGF*KANTVGTALCFRFL Trigger: CAAGAACCTGAAACACAATGCTGTGCCCACGGTGTTCGCTTTTCAGAACCCCACAGAGGTCTTACCAGATCGAGAAGCAATGGAGGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105665.3 |
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| CDS-3UTR CAA 90 bp | TTCAAAAGATTTATTCCACATCTACACGAACCAGGCAGAAAAAGAGTCACTCAGTCAGCCCGGCCGATGTaGAGCACCCACTCCCTCAAC | + |
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Preference number: 5 (lower is better) Translates to: FKRFIPHLHEPGRKRVTQSARPM*STHSLN Trigger: GTTGAGGGAGTGGGTGCTCAACATCGGCCGGGCTGA...CTGAGTGACTCTTTTTCTGCCTGGTTCGTGTAGATGTGGAATAAATCTTTTGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036680.8 |
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| CDS CCA 72 bp | GCTGTCCCGGAAGGGGCCTCTTCAACCCCAGAGGGCTaGCAGGCAGGCCAGCGGCCTCCGTGGCCTCCATTG | + |
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Preference number: 6 (lower is better) Translates to: AVPEGASSTPEG*QAGQRPPWPPL Trigger: CAATGGAGGCCACGGAGGCCGCTGGCCTGCCTGCCAGCCCTCTGGGGTTGAAGAGGCCCCTTCCGGGACAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS CCA 72 bp | ACCCCAGAGGGCTGGCAGGCAGGCCAGCGGCCTCCGTaGCCTCCATTGCTTCTCGATCTGGTAAGACCTGCT | + |
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Preference number: 6 (lower is better) Translates to: TPEGWQAGQRPP*PPLLLDLVRPA Trigger: AGCAGGTCTTACCAGATCGAGAAGCAATGGAGGCCACGGAGGCCGCTGGCCTGCCTGCCAGCCCTCTGGGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036680.8 |
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| CDS CCA 72 bp | ACCCCAGAGGGCTGGCAGGCAGGCCAGCGGCCTCCGTaGCCTCCATTGCTTCTCGATCTGGTAAGACCTCTG | + |
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Preference number: 6 (lower is better) Translates to: TPEGWQAGQRPP*PPLLLDLVRPL Trigger: CAGAGGTCTTACCAGATCGAGAAGCAATGGAGGCCACGGAGGCCGCTGGCCTGCCTGCCAGCCCTCTGGGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105665.3 |
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| CDS CAA 72 bp | GTGTGCTGCTTAGGCTTGAAGTCAGCCCGGCCGATGTaGAGCACCCACTCCCTCAACAGCTCCGGGCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: VCCLGLKSARPM*STHSLNSSGRL Trigger: CAGCCGCCCGGAGCTGTTGAGGGAGTGGGTGCTCAACATCGGCCGGGCTGACTTCAAGCCTAAGCAGCACAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS CAA 90 bp | CAGATGACTGTGTGCTGCTTAGGCTTGAAGTCAGCCCGGCCGATGTaGAGCACCCACTCCCTCAACAGCTCCGGGCGGCTGAAGGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: QMTVCCLGLKSARPM*STHSLNSSGRLKGN Trigger: GTTCCCCTTCAGCCGCCCGGAGCTGTTGAGGGAGTGGGTGCTCAACATCGGCCGGGCTGACTTCAAGCCTAAGCAGCACACAGTCATCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS CCA 72 bp | CTCAGGCGGCCACATGTCCTCCGCAACAGCAGCCTCTaGGCTTTCAGCCGCTTCCGAAGCCTCTTGTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LRRPHVLRNSSL*AFSRFRSLLFS Trigger: GGAAAACAAGAGGCTTCGGAAGCGGCTGAAAGCCCAGAGGCTGCTGTTGCGGAGGACATGTGGCCGCCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS CAA 90 bp | TCGGGTCTGAAGTGTTCCGAGCAGATGACTGTGTGCTGCTTAGGCTaGAAGTCAGCCCGGCCGATGTTGAGCACCCACTCCCTCAACAGC | + |
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Preference number: 6 (lower is better) Translates to: SGLKCSEQMTVCCLG*KSARPMLSTHSLNS Trigger: GCTGTTGAGGGAGTGGGTGCTCAACATCGGCCGGGCTGACTTCAAGCCTAAGCAGCACACAGTCATCTGCTCGGAACACTTCAGACCCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS GCA 72 bp | TCGGGTCTGAAGTGTTCCGAGCAGATGACTGTGTGCTaGTTAGGCTTGAAGTCAGCCCGGCCGATGTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: SGLKCSEQMTVC*LGLKSARPMLS Trigger: GCTCAACATCGGCCGGGCTGACTTCAAGCCTAAGCAGCACACAGTCATCTGCTCGGAACACTTCAGACCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS GCA 72 bp | CACTCGGGTCTGAAGTGTTCCGAGCAGATGACTGTGTaGTGCTTAGGCTTGAAGTCAGCCCGGCCGATGTTG | + |
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Preference number: 6 (lower is better) Translates to: HSGLKCSEQMTV*CLGLKSARPML Trigger: CAACATCGGCCGGGCTGACTTCAAGCCTAAGCAGCACACAGTCATCTGCTCGGAACACTTCAGACCCGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS CAA 72 bp | AAGTGTTCCGAGCAGATGACTGTGTGCTGCTTAGGCTaGAAGTCAGCCCGGCCGATGTTGAGCACCCACTCC | + |
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Preference number: 6 (lower is better) Translates to: KCSEQMTVCCLG*KSARPMLSTHS Trigger: GGAGTGGGTGCTCAACATCGGCCGGGCTGACTTCAAGCCTAAGCAGCACACAGTCATCTGCTCGGAACACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036680.8 ENSMUST00000105665.3 |
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| CDS CCA 72 bp | GGCAGACCTCTGTGGGGTTCTGAAAAGCGAACACCGTaGGCACAGCATTGTGTTTCAGGTTCTTGCGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: GRPLWGSEKRTP*AQHCVSGSCGS Trigger: GGAACCGCAAGAACCTGAAACACAATGCTGTGCCCACGGTGTTCGCTTTTCAGAACCCCACAGAGGTCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036680.8 |
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| CDS CCA 72 bp | TGGCCTCCATTGCTTCTCGATCTGGTAAGACCTCTGTaGGGTTCTGAAAAGCGAACACCGTGGGCACAGCAT | + |
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Preference number: 6 (lower is better) Translates to: WPPLLLDLVRPL*GSEKRTPWAQH Trigger: ATGCTGTGCCCACGGTGTTCGCTTTTCAGAACCCCACAGAGGTCTTACCAGATCGAGAAGCAATGGAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105665.3 |
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| CDS CCA 72 bp | GTAAGACCTCTGTGGGGTTCTGAAAAGCGAACACCGTaGGCACAGCATTGTGTTTCAGGTTCTTGCGGTTCC | + |
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Preference number: 6 (lower is better) Translates to: VRPLWGSEKRTP*AQHCVSGSCGS Trigger: GGAACCGCAAGAACCTGAAACACAATGCTGTGCCCACGGTGTTCGCTTTTCAGAACCCCACAGAGGTCTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105665.3 |
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