Pregenerated sensors for THAP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020137Ensembl transcript IDs: ENSMUST00000020346.6, ENSMUST00000218842.2, ENSMUST00000218989.2
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGACAAGTGGCGGAGGTGCATAGTTAGCGTACCAAAGTGGACCTaGGCTCCAGGTCCTCTCAGCTCCCCCAGGCCCTACCTGGTACAG | + |
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Preference number: 1 (lower is better) Translates to: QDKWRRCIVSVPKWT*APGPLSSPRPYLVQ Trigger: CTGTACCAGGTAGGGCCTGGGGGAGCTGAGAGGACCTGGAGCCCAGGTCCACTTTGGTACGCTAACTATGCACCTCCGCCACTTGTCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR CCA 90 bp | CTCCAGGTCCTCTCAGCTCCCCCAGGCCCTACCTGGTACAGGGCATaGATGCCATACCCCGCCCTCTATGCTGAACTTCCCAACCTTAAA | + |
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Preference number: 1 (lower is better) Translates to: LQVLSAPPGPTWYRA*MPYPALYAELPNLK Trigger: TTTAAGGTTGGGAAGTTCAGCATAGAGGGCGGGGTATGGCATCCATGCCCTGTACCAGGTAGGGCCTGGGGGAGCTGAGAGGACCTGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR CCA 90 bp | AGTAAAACTGCAGGACTTGATTGTAGTGTAACTGTCAGAGTGCGGTaGGTGGGGACGGCAGGAGCTGGGCACTGGGTTCTGTGTGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: SKTAGLDCSVTVRVR*VGTAGAGHWVLCEE Trigger: TTCCTCACACAGAACCCAGTGCCCAGCTCCTGCCGTCCCCACCCACCGCACTCTGACAGTTACACTACAATCAAGTCCTGCAGTTTTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR TCA 90 bp | AAAAGACTGGGGATGTGGCTCCGTGGGAGCGTATACATGCATGCGTaGAGCCCTGGGTTCAATTTCCAGCACACAAACAACACAGCCCAA | + |
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Preference number: 1 (lower is better) Translates to: KRLGMWLRGSVYMHA*SPGFNFQHTNNTAQ Trigger: TTGGGCTGTGTTGTTTGTGTGCTGGAAATTGAACCCAGGGCTTCACGCATGCATGTATACGCTCCCACGGAGCCACATCCCCAGTCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR TCA 90 bp | GTAGCATGTTACTTGCTTCTAAGCTCTTCACAAAGCACGTGGCTTTaGTCCACCTTCGAGTTGCTCTGCGTTCTCTTTGCAGGCAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: VACYLLLSSSQSTWL*STFELLCVLFAGKF Trigger: AAACTTGCCTGCAAAGAGAACGCAGAGCAACTCGAAGGTGGATCAAAGCCACGTGCTTTGTGAAGAGCTTAGAAGCAAGTAACATGCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020346.6 |
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| 3UTR GCA 90 bp | GATTCTGACCCAGTAACACTGAACTCAGGTCAAACCCTAGAACTCTaGCCACCTCTCACCAGCCATTCTAAGAAAAATCCGTTTGATTTC | + |
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Preference number: 1 (lower is better) Translates to: DSDPVTLNSGQTLEL*PPLTSHSKKNPFDF Trigger: GAAATCAAACGGATTTTTCTTAGAATGGCTGGTGAGAGGTGGGCAGAGTTCTAGGGTTTGACCTGAGTTCAGTGTTACTGGGTCAGAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218842.2 |
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| 3UTR GCA 90 bp | TTCTTAGACGTTGACTATAACTCACTGGGTTTTCCCAGTCTGAGGTaGTTGGGGCCTTACCTAGTTTGGAGTTTCAAAGGTATTTCACAT | + |
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Preference number: 1 (lower is better) Translates to: FLDVDYNSLGFPSLR*LGPYLVWSFKGISH Trigger: ATGTGAAATACCTTTGAAACTCCAAACTAGGTAAGGCCCCAAGCACCTCAGACTGGGAAAACCCAGTGAGTTATAGTCAACGTCTAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR TCA 90 bp | GAATTCAAATTCCATCTCTGTGTAGGAAAGGTTTACAGTCACGTGTaGTCAGGCATGTTATGTTCATATGGTAAGCTCACAAACTTGAAG | + |
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Preference number: 1 (lower is better) Translates to: EFKFHLCVGKVYSHV*SGMLCSYGKLTNLK Trigger: CTTCAAGTTTGTGAGCTTACCATATGAACATAACATGCCTGATCACACGTGACTGTAAACCTTTCCTACACAGAGATGGAATTTGAATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR TCA 90 bp | CACAAACAACACAGCCCAAAGAAACTAAAGGCTGATGATACTGAATaGAGACTATGCAACTTTGCCAAAAGTGCTTGTATTTTACAATGC | + |
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Preference number: 1 (lower is better) Translates to: HKQHSPKKLKADDTE*RLCNFAKSACILQC Trigger: GCATTGTAAAATACAAGCACTTTTGGCAAAGTTGCATAGTCTTCATTCAGTATCATCAGCCTTTAGTTTCTTTGGGCTGTGTTGTTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR TCA 90 bp | TGTGTTTCCAAAATATCAAGTTTCAAATATTCCCGTTCTCAGCTTTaGCCTACTTCTAGCTGTGTCTTTCTTTCAGCAATCATTTCGATC | + |
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Preference number: 1 (lower is better) Translates to: CVSKISSFKYSRSQL*PTSSCVFLSAIISI Trigger: GATCGAAATGATTGCTGAAAGAAAGACACAGCTAGAAGTAGGTCAAAGCTGAGAACGGGAATATTTGAAACTTGATATTTTGGAAACACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218842.2 |
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| 3UTR CAA 90 bp | CGTGACCCTCATGTAAGGCACTTCTGCTCGGTGTCAAGCTTGTCATaGGATTTCCCACTTCCTCAGTCTCCAGAGAGTGACACTGACACT | + |
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Preference number: 2 (lower is better) Translates to: RDPHVRHFCSVSSLS*DFPLPQSPESDTDT Trigger: AGTGTCAGTGTCACTCTCTGGAGACTGAGGAAGTGGGAAATCCAATGACAAGCTTGACACCGAGCAGAAGTGCCTTACATGAGGGTCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGAGGCATTTGTCCTCTGGCTTCATCAGGCCTCACTCCATCAGTTTTCTGGTCTAGACAGTGCTGGTTaGTGGGTGGGACAGAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: LEAFVLWLHQASLHQFSGLDSAG*WVGQRG Trigger: TCCTCTCTGTCCCACCCAGCAACCAGCACTGTCTAG...ACCAGAAAACTGATGGAGTGAGGCCTGATGAAGCCAGAGGACAAATGCCTCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAAAGGAGCAAATGTTTCCAGATGTGCGGACCCACACACAAAGGACAAGAGCCTTGCTCTTCGCAGCTaGGCAAGTGACCAAAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: GKGANVSRCADPHTKDKSLALRS*ASDQSQ Trigger: CTGACTTTGGTCACTTGCCCAGCTGCGAAGAGCAAG...GCTCTTGTCCTTTGTGTGTGGGTCCGCACATCTGGAAACATTTGCTCCTTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218989.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCCCAGTCTGAGGTGCTTGGGGCCTTACCTAGTTTGGAGTTTCAAAGGTATTGCAGGAGCTGGGCACTaGGTTCTGTGTGAGGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: FPSLRCLGPYLVWSFKGIAGAGH*VLCEEN Trigger: GTTTTCCTCACACAGAACCCAGTGCCCAGCTCCTGC...AATACCTTTGAAACTCCAAACTAGGTAAGGCCCCAAGCACCTCAGACTGGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCCCAGTCTGAGGTGCTTGGGGCCTTACCTAGTTTGGAGTTTCAAAGGTATTCAAAGCACGTGGCTTTaGTCCACCTTCGAGTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: FPSLRCLGPYLVWSFKGIQSTWL*STFELL Trigger: GAGCAACTCGAAGGTGGATCAAAGCCACGTGCTTTG...AATACCTTTGAAACTCCAAACTAGGTAAGGCCCCAAGCACCTCAGACTGGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020346.6 |
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| 3UTR-3UTR CCA 90 bp | AAGGTCTCAAATAGCCTAAGCTGGCTATTTGAGTTTTGGGCCCTCCCACTATTCAAAAGACTGGGGATGTaGCTCCGTGGGAGCGTATAC | + |
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Preference number: 2 (lower is better) Translates to: KVSNSLSWLFEFWALPLFKRLGM*LRGSVY Trigger: GTATACGCTCCCACGGAGCCACATCCCCAGTCTTTT...GAATAGTGGGAGGGCCCAAAACTCAAATAGCCAGCTTAGGCTATTTGAGACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR CAA 90 bp | GGTAGCATGTTACTTGCTTCTAAGCTCTTCACAAAGCACGTGGCTTaGATCCACCTTCGAGTTGCTCTGCGTTCTCTTTGCAGGCAAGTT | + |
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Preference number: 2 (lower is better) Translates to: GSMLLASKLFTKHVA*IHLRVALRSLCRQV Trigger: AACTTGCCTGCAAAGAGAACGCAGAGCAACTCGAAGGTGGATCAAAGCCACGTGCTTTGTGAAGAGCTTAGAAGCAAGTAACATGCTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020346.6 |
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| 3UTR-3UTR TCA 90 bp | AGTTTTGGGCCCTCCCACTATTCCTCCAAAGCACAGGAATTAGAGGCATTTGTCTGTTTCCTAAGTCCGTaGCCCTCATGTAAGGCACTT | + |
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Preference number: 2 (lower is better) Translates to: SFGPSHYSSKAQELEAFVCFLSP*PSCKAL Trigger: AAGTGCCTTACATGAGGGTCACGGACTTAGGAAACA...GACAAATGCCTCTAATTCCTGTGCTTTGGAGGAATAGTGGGAGGGCCCAAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGCATTTGTCCTCTGGCTTCATCAGGCCTCACTCCATCAGTTTTCTGGTTTATGTTTCCTAAGTCCGTaGCCCTCATGTAAGGCACTT | + |
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Preference number: 2 (lower is better) Translates to: EAFVLWLHQASLHQFSGLCFLSP*PSCKAL Trigger: AAGTGCCTTACATGAGGGTCACGGACTTAGGAAACA...TAAACCAGAAAACTGATGGAGTGAGGCCTGATGAAGCCAGAGGACAAATGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR CCA 90 bp | GCTACCAAGGGTGATCACATCTACAAAAGAGTTTATAGAGTATTGGTCATAAGTCCCCCAGGCCCTACCTaGTACAGGGCATGGATGCCA | + |
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Preference number: 2 (lower is better) Translates to: ATKGDHIYKRVYRVLVISPPGPT*YRAWMP Trigger: TGGCATCCATGCCCTGTACCAGGTAGGGCCTGGGGG...ACTTATGACCAATACTCTATAAACTCTTTTGTAGATGTGATCACCCTTGGTAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR CCA 90 bp | GCTACCAAGGGTGATCACATCTACAAAAGAGTTTATAGAGTATTGGTCATAAGTACAGCCGGGCGGTGGTaGCACACGCCTTTAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: ATKGDHIYKRVYRVLVISTAGRW*HTPLIP Trigger: TGGGATTAAAGGCGTGTGCCACCACCGCCCGGCTGT...ACTTATGACCAATACTCTATAAACTCTTTTGTAGATGTGATCACCCTTGGTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR CCA 90 bp | ATCAGGCCTCACTCCATCAGTTTTCTGGTTTACAGTCAACTAAATAAATCTATCGTGCTGGTTGCTGGGTaGGACAGAGAGGAACAGCCC | + |
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Preference number: 2 (lower is better) Translates to: IRPHSISFLVYSQLNKSIVLVAG*DREEQP Trigger: GGGCTGTTCCTCTCTGTCCCACCCAGCAACCAGCAC...GATAGATTTATTTAGTTGACTGTAAACCAGAAAACTGATGGAGTGAGGCCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCCCAAGAGATGGCAGAGAATTCAAATTCCATCTCTGTGTAGGAAAGGTTTAGCACTGGGTTCTGTGTaGGGAAAACTTGAGTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: QPKRWQRIQIPSLCRKGLALGSV*GKLECR Trigger: TCTGCACTCAAGTTTTCCTCACACAGAACCCAGTGC...TAAACCTTTCCTACACAGAGATGGAATTTGAATTCTCTGCCATCTCTTGGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGAGGCATTTGTCCTCTGGCTTCATCAGGCCTCACTCCATCAGTTTTCTGGTGAGCCTGTTTTAACTTaGCACTATTGGGTTTCACAC | + |
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Preference number: 2 (lower is better) Translates to: LEAFVLWLHQASLHQFSGEPVLT*HYWVSH Trigger: GTGTGAAACCCAATAGTGTCAAGTTAAAACAGGCTC...ACCAGAAAACTGATGGAGTGAGGCCTGATGAAGCCAGAGGACAAATGCCTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGCATTTGTCCTCTGGCTTCATCAGGCCTCACTCCATCAGTTTTCTGGTTTATCCACAAATAGTGAATaGAAAAGACTGGGGATGTGG | + |
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Preference number: 2 (lower is better) Translates to: EAFVLWLHQASLHQFSGLSTNSE*KRLGMW Trigger: CCACATCCCCAGTCTTTTTCATTCACTATTTGTGGA...TAAACCAGAAAACTGATGGAGTGAGGCCTGATGAAGCCAGAGGACAAATGCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTTAGTGACACAAGGCCTTTTCAAGGTGCAAGTGGTTCCAGAAGAGCGATTTCAAGAGCAGAAACCCTaGTGGCAGTGTTTCCTAAGT | + |
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Preference number: 2 (lower is better) Translates to: LLVTQGLFKVQVVPEERFQEQKP*WQCFLS Trigger: ACTTAGGAAACACTGCCAGCAGGGTTTCTGCTCTTG...AAATCGCTCTTCTGGAACCACTTGCACCTTGAAAAGGCCTTGTGTCACTAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR TCA 90 bp | ACCAAGGGTGATCACATCTACAAAAGAGTTTATAGAGTATTGGTCATAAGTATCTGGGTTTTCCCAGTCTaGGGTGCTTGGGGCCTTACC | + |
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Preference number: 2 (lower is better) Translates to: TKGDHIYKRVYRVLVISIWVFPV*GAWGLT Trigger: GGTAAGGCCCCAAGCACCTCAGACTGGGAAAACCCA...GATACTTATGACCAATACTCTATAAACTCTTTTGTAGATGTGATCACCCTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR GCA 90 bp | CTTAAGGCAGTTGGTAAAATCTGTTCTGAGATGCCCTTAGGTAGCATGTTACTTACCTTCGAGTTGCTCTaGGTTCTCTTTGCAGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: LKAVGKICSEMPLGSMLLTFELL*VLFAGK Trigger: CTTGCCTGCAAAGAGAACGCAGAGCAACTCGAAGGT...AAGTAACATGCTACCTAAGGGCATCTCAGAACAGATTTTACCAACTGCCTTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020346.6 |
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| 3UTR-3UTR GCA 90 bp | CAGCCCAAGAGATGGCAGAGAATTCAAATTCCATCTCTGTGTAGGAAAGGTTTACAAAGAAACAAACCTTaGCCCGTACCCCAGAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: QPKRWQRIQIPSLCRKGLQRNKP*PVPQRF Trigger: AAACCTCTGGGGTACGGGGCAAGGTTTGTTTCTTTG...TAAACCTTTCCTACACAGAGATGGAATTTGAATTCTCTGCCATCTCTTGGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR GCA 90 bp | TTCATCAGGCCTCACTCCATCAGTTTTCTGGTTTACAGTCAACTAAATAAATCTCCTCAGACATGGATATaGAGCAGCCAGACCTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: FIRPHSISFLVYSQLNKSPQTWI*SSQTWV Trigger: GACCCAGGTCTGGCTGCTGCATATCCATGTCTGAGG...AGATTTATTTAGTTGACTGTAAACCAGAAAACTGATGGAGTGAGGCCTGATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR GCA 90 bp | ATCAGGCCTCACTCCATCAGTTTTCTGGTTTACAGTCAACTAAATAAATCTATCCCTCAGACATGGATATaGAGCAGCCAGACCTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: IRPHSISFLVYSQLNKSIPQTWI*SSQTWV Trigger: GACCCAGGTCTGGCTGCTGCATATCCATGTCTGAGG...GATAGATTTATTTAGTTGACTGTAAACCAGAAAACTGATGGAGTGAGGCCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGCATTTGTCCTCTGGCTTCATCAGGCCTCACTCCATCAGTTTTCTGGTTTAGGGCCTTACCTAGTTTaGAGTTTCAAAGGTATTTCA | + |
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Preference number: 2 (lower is better) Translates to: EAFVLWLHQASLHQFSGLGPYLV*SFKGIS Trigger: TGAAATACCTTTGAAACTCCAAACTAGGTAAGGCCC...TAAACCAGAAAACTGATGGAGTGAGGCCTGATGAAGCCAGAGGACAAATGCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTACCCAATACTTAAGATAGCTACCAAGGGTGATCACATCTACAAAAGAGTTCACACCCAGGACAAGTaGCGGAGGTGCATAGTTAGC | + |
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Preference number: 2 (lower is better) Translates to: LYPILKIATKGDHIYKRVHTQDK*RRCIVS Trigger: GCTAACTATGCACCTCCGCCACTTGTCCTGGGTGTG...AACTCTTTTGTAGATGTGATCACCCTTGGTAGCTATCTTAAGTATTGGGTAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR CAA 90 bp | TTAGACGTTGACTATAACTCACTGGGTTTTCCCAGTCTGAGGTGCTaGGGGCCTTACCTAGTTTGGAGTTTCAAAGGTATTTCACATTCA | + |
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Preference number: 2 (lower is better) Translates to: LDVDYNSLGFPSLRC*GPYLVWSFKGISHS Trigger: TGAATGTGAAATACCTTTGAAACTCCAAACTAGGTAAGGCCCCAAGCACCTCAGACTGGGAAAACCCAGTGAGTTATAGTCAACGTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGAGGCATTTGTCCTCTGGCTTCATCAGGCCTCACTCCATCAGTTTTCTGGTGATTGTAGGATTCCTTaGATGTTTTTAAAAGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LEAFVLWLHQASLHQFSGDCRIP*MFLKAW Trigger: CCAGGCTTTTAAAAACATTCAAGGAATCCTACAATC...ACCAGAAAACTGATGGAGTGAGGCCTGATGAAGCCAGAGGACAAATGCCTCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR GCA 90 bp | ACCAAGGGTGATCACATCTACAAAAGAGTTTATAGAGTATTGGTCATAAGTATCCTAGACAGTGCTGGTTaGTGGGTGGGACAGAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: TKGDHIYKRVYRVLVISILDSAG*WVGQRG Trigger: TCCTCTCTGTCCCACCCAGCAACCAGCACTGTCTAG...GATACTTATGACCAATACTCTATAAACTCTTTTGTAGATGTGATCACCCTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR CCA 90 bp | GCTACCAAGGGTGATCACATCTACAAAAGAGTTTATAGAGTATTGGTCATAAGTGAGCAGAAACCCTGCTaGCAGTGTTTCCTAAGTCCG | + |
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Preference number: 2 (lower is better) Translates to: ATKGDHIYKRVYRVLVISEQKPC*QCFLSP Trigger: CGGACTTAGGAAACACTGCCAGCAGGGTTTCTGCTC...ACTTATGACCAATACTCTATAAACTCTTTTGTAGATGTGATCACCCTTGGTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAAGGGTGATCACATCTACAAAAGAGTTTATAGAGTATTGGTCATAAGTATCCACACCCAGGACAAGTaGCGGAGGTGCATAGTTAGC | + |
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Preference number: 2 (lower is better) Translates to: TKGDHIYKRVYRVLVISIHTQDK*RRCIVS Trigger: GCTAACTATGCACCTCCGCCACTTGTCCTGGGTGTG...GATACTTATGACCAATACTCTATAAACTCTTTTGTAGATGTGATCACCCTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR CCA 90 bp | TTAGAGGCATTTGTCCTCTGGCTTCATCAGGCCTCACTCCATCAGTTTTCTGGTCATTTACTGAGAGGATaGTTTATTCAATGGTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: LEAFVLWLHQASLHQFSGHLLRG*FIQWCP Trigger: TGGACACCATTGAATAAACCATCCTCTCAGTAAATG...ACCAGAAAACTGATGGAGTGAGGCCTGATGAAGCCAGAGGACAAATGCCTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR CCA 90 bp | GTTAGCTCCTACTTCACATGTTCTTTAGAATGTAATATCCCAGCTTTGGTGCGGTGTCAAGCTTGTCATTaGATTTCCCACTTCCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: VSSYFTCSLECNIPALVRCQACH*ISHFLS Trigger: ACTGAGGAAGTGGGAAATCCAATGACAAGCTTGACA...CCGCACCAAAGCTGGGATATTACATTCTAAAGAACATGTGAAGTAGGAGCTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR CCA 90 bp | ATCAGGCCTCACTCCATCAGTTTTCTGGTTTACAGTCAACTAAATAAATCTATCATTAATCTCAGTACTTaGGAGGCAGAGGCAGGCGGA | + |
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Preference number: 2 (lower is better) Translates to: IRPHSISFLVYSQLNKSIINLST*EAEAGG Trigger: TCCGCCTGCCTCTGCCTCCCAAGTACTGAGATTAAT...GATAGATTTATTTAGTTGACTGTAAACCAGAAAACTGATGGAGTGAGGCCTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR GCA 90 bp | ATCAGGCCTCACTCCATCAGTTTTCTGGTTTACAGTCAACTAAATAAATCTATCCAAGAGCAGAAACCCTaGTGGCAGTGTTTCCTAAGT | + |
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Preference number: 2 (lower is better) Translates to: IRPHSISFLVYSQLNKSIQEQKP*WQCFLS Trigger: ACTTAGGAAACACTGCCAGCAGGGTTTCTGCTCTTG...GATAGATTTATTTAGTTGACTGTAAACCAGAAAACTGATGGAGTGAGGCCTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCCCAAGAGATGGCAGAGAATTCAAATTCCATCTCTGTGTAGGAAAGGTTTAATATCCCAGCTTTGGTaGGGAATGCTTTTACTTTTA | + |
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Preference number: 2 (lower is better) Translates to: QPKRWQRIQIPSLCRKGLISQLW*GMLLLL Trigger: TAAAAGTAAAAGCATTCCGCACCAAAGCTGGGATAT...TAAACCTTTCCTACACAGAGATGGAATTTGAATTCTCTGCCATCTCTTGGGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR-3UTR TCA 90 bp | CTTTACCCAATACTTAAGATAGCTACCAAGGGTGATCACATCTACAAAAGAGTTGAGCCTGTTTTAACTTaGCACTATTGGGTTTCACAC | + |
|
Preference number: 2 (lower is better) Translates to: LYPILKIATKGDHIYKRVEPVLT*HYWVSH Trigger: GTGTGAAACCCAATAGTGTCAAGTTAAAACAGGCTC...AACTCTTTTGTAGATGTGATCACCCTTGGTAGCTATCTTAAGTATTGGGTAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCAGGCCTCACTCCATCAGTTTTCTGGTTTACAGTCAACTAAATAAATCTATCTGTCAAGCTTGTCATTaGATTTCCCACTTCCTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: IRPHSISFLVYSQLNKSICQACH*ISHFLS Trigger: ACTGAGGAAGTGGGAAATCCAATGACAAGCTTGACA...GATAGATTTATTTAGTTGACTGTAAACCAGAAAACTGATGGAGTGAGGCCTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTACCAAGGGTGATCACATCTACAAAAGAGTTTATAGAGTATTGGTCATAAGTCTTCCAGAGGAAGATTaGTTAAGGCAGTTGGTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: ATKGDHIYKRVYRVLVISLPEED*LRQLVK Trigger: TTTTACCAACTGCCTTAAGCAATCTTCCTCTGGAAG...ACTTATGACCAATACTCTATAAACTCTTTTGTAGATGTGATCACCCTTGGTAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020346.6 |
||
| 3UTR-3UTR GCA 90 bp | GCTACCAAGGGTGATCACATCTACAAAAGAGTTTATAGAGTATTGGTCATAAGTAGCTTTGGTGCGGAATaGTTTTACTTTTATGAACAT | + |
|
Preference number: 2 (lower is better) Translates to: ATKGDHIYKRVYRVLVISSFGAE*FYFYEH Trigger: ATGTTCATAAAAGTAAAAGCATTCCGCACCAAAGCT...ACTTATGACCAATACTCTATAAACTCTTTTGTAGATGTGATCACCCTTGGTAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR CCA 72 bp | CTCTCAGCTCCCCCAGGCCCTACCTGGTACAGGGCATaGATGCCATACCCCGCCCTCTATGCTGAACTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LSAPPGPTWYRA*MPYPALYAELP Trigger: GGGAAGTTCAGCATAGAGGGCGGGGTATGGCATCCATGCCCTGTACCAGGTAGGGCCTGGGGGAGCTGAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR CCA 72 bp | GACAAGTGGCGGAGGTGCATAGTTAGCGTACCAAAGTaGACCTGGGCTCCAGGTCCTCTCAGCTCCCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: DKWRRCIVSVPK*TWAPGPLSSPR Trigger: CCTGGGGGAGCTGAGAGGACCTGGAGCCCAGGTCCACTTTGGTACGCTAACTATGCACCTCCGCCACTTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR CCA 72 bp | GCAGGACTTGATTGTAGTGTAACTGTCAGAGTGCGGTaGGTGGGGACGGCAGGAGCTGGGCACTGGGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AGLDCSVTVRVR*VGTAGAGHWVL Trigger: CAGAACCCAGTGCCCAGCTCCTGCCGTCCCCACCCACCGCACTCTGACAGTTACACTACAATCAAGTCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR TCA 72 bp | GAGCGAGGCTCCCCTTGCTCTTCGCAGCTGGGCAAGTaGCCAAAGTCAGAGGACCTTGTTCTTCTGACACGA | + |
|
Preference number: 3 (lower is better) Translates to: ERGSPCSSQLGK*PKSEDLVLLTR Trigger: TCGTGTCAGAAGAACAAGGTCCTCTGACTTTGGTCACTTGCCCAGCTGCGAAGAGCAAGGGGAGCCTCGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218989.2 |
||
| 3UTR TCA 72 bp | GAGCAGAAACCCTGCTGGCAGTGTTTCCTAAGTCCGTaGCCCTCATGTAAGGCACTTCTGCTCGGTGTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: EQKPCWQCFLSP*PSCKALLLGVK Trigger: CTTGACACCGAGCAGAAGTGCCTTACATGAGGGTCACGGACTTAGGAAACACTGCCAGCAGGGTTTCTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR TCA 72 bp | GGGATGTGGCTCCGTGGGAGCGTATACATGCATGCGTaGAGCCCTGGGTTCAATTTCCAGCACACAAACAAC | + |
|
Preference number: 3 (lower is better) Translates to: GMWLRGSVYMHA*SPGFNFQHTNN Trigger: GTTGTTTGTGTGCTGGAAATTGAACCCAGGGCTTCACGCATGCATGTATACGCTCCCACGGAGCCACATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR CCA 72 bp | GCTCCGTGGGAGCGTATACATGCATGCGTGAAGCCCTaGGTTCAATTTCCAGCACACAAACAACACAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: APWERIHACVKP*VQFPAHKQHSP Trigger: TGGGCTGTGTTGTTTGTGTGCTGGAAATTGAACCCAGGGCTTCACGCATGCATGTATACGCTCCCACGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR CCA 72 bp | GAGAACTGGAAGACACATGTTCGTCCTAGCACTGCGTaGACCGCAGACATCTCCATCTCTTTGCAAGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ENWKTHVRPSTA*TADISISLQVG Trigger: TCCCACTTGCAAAGAGATGGAGATGTCTGCGGTCCACGCAGTGCTAGGACGAACATGTGTCTTCCAGTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218842.2 |
||
| 3UTR GCA 72 bp | AACTTTCCTCGGAAAAGGAGCAAATGTTTCCAGATGTaGGGACCCACACACAAAGGACAAGAGCGAGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: NFPRKRSKCFQM*GPTHKGQERGS Trigger: GGAGCCTCGCTCTTGTCCTTTGTGTGTGGGTCCGCACATCTGGAAACATTTGCTCCTTTTCCGAGGAAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218989.2 |
||
| 3UTR CCA 72 bp | ATGTTTGCAGGGAAGACAATTCTTACTAGACAGTGCTaGTTGCTGGGTGGGACAGAGAGGAACAGCCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: MFAGKTILTRQC*LLGGTERNSPR Trigger: TCTTGGGCTGTTCCTCTCTGTCCCACCCAGCAACCAGCACTGTCTAGTAAGAATTGTCTTCCCTGCAAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR GCA 72 bp | CCAGTAACACTGAACTCAGGTCAAACCCTAGAACTCTaGCCACCTCTCACCAGCCATTCTAAGAAAAATCCG | + |
|
Preference number: 3 (lower is better) Translates to: PVTLNSGQTLEL*PPLTSHSKKNP Trigger: CGGATTTTTCTTAGAATGGCTGGTGAGAGGTGGGCAGAGTTCTAGGGTTTGACCTGAGTTCAGTGTTACTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218842.2 |
||
| 3UTR CCA 72 bp | TCCTCCAAAGCACAGGAATTAGAGGCATTTGTCCTCTaGCTTCATCAGGCCTCACTCCATCAGTTTTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SSKAQELEAFVL*LHQASLHQFSG Trigger: ACCAGAAAACTGATGGAGTGAGGCCTGATGAAGCCAGAGGACAAATGCCTCTAATTCCTGTGCTTTGGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCATTTGTCCTCTGGCTTCATCAGGCCTCACTCCATCAGTTTTCTGGTTTACTGTGTGAGGAAAACTaGAGTGCAGAGAGTCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: EAFVLWLHQASLHQFSGLLCEEN*SAESLF Trigger: GAAGAGACTCTCTGCACTCAAGTTTTCCTCACACAG...TAAACCAGAAAACTGATGGAGTGAGGCCTGATGAAGCCAGAGGACAAATGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCCAGTCTGAGGTGCTTGGGGCCTTACCTAGTTTGGAGTTTCAAAGGTATTCTGTGTGAGGAAAACTaGAGTGCAGAGAGTCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FPSLRCLGPYLVWSFKGILCEEN*SAESLF Trigger: GAAGAGACTCTCTGCACTCAAGTTTTCCTCACACAG...AATACCTTTGAAACTCCAAACTAGGTAAGGCCCCAAGCACCTCAGACTGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCCAGTCTGAGGTGCTTGGGGCCTTACCTAGTTTGGAGTTTCAAAGGTATTGTGTCAAGCTTGTCATaGGATTTCCCACTTCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: FPSLRCLGPYLVWSFKGIVSSLS*DFPLPQ Trigger: CTGAGGAAGTGGGAAATCCAATGACAAGCTTGACAC...AATACCTTTGAAACTCCAAACTAGGTAAGGCCCCAAGCACCTCAGACTGGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAGAGGCATTTGTCCTCTGGCTTCATCAGGCCTCACTCCATCAGTTTTCTGGTGGGGCCTTACCTAGTTaGGAGTTTCAAAGGTATTTC | + |
|
Preference number: 3 (lower is better) Translates to: LEAFVLWLHQASLHQFSGGALPS*EFQRYF Trigger: GAAATACCTTTGAAACTCCAAACTAGGTAAGGCCCC...ACCAGAAAACTGATGGAGTGAGGCCTGATGAAGCCAGAGGACAAATGCCTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAGAGGCATTTGTCCTCTGGCTTCATCAGGCCTCACTCCATCAGTTTTCTGGTGGAAGGGCTCTTATTTaGAAGGGAGGGCTCTTATTA | + |
|
Preference number: 3 (lower is better) Translates to: LEAFVLWLHQASLHQFSGGRALI*KGGLLL Trigger: TAATAAGAGCCCTCCCTTCAAAATAAGAGCCCTTCC...ACCAGAAAACTGATGGAGTGAGGCCTGATGAAGCCAGAGGACAAATGCCTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR TCA 72 bp | CAGGAGCTGGGCACTGGGTTCTGTGTGAGGAAAACTTaGGTGCAGAGAGTCTCTTCCATTTTACATTTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QELGTGFCVRKT*VQRVSSILHLE Trigger: CTCTAAATGTAAAATGGAAGAGACTCTCTGCACTCAAGTTTTCCTCACACAGAACCCAGTGCCCAGCTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020346.6 |
||
| 3UTR GCA 72 bp | GTTGACTATAACTCACTGGGTTTTCCCAGTCTGAGGTaGTTGGGGCCTTACCTAGTTTGGAGTTTCAAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: VDYNSLGFPSLR*LGPYLVWSFKG Trigger: ACCTTTGAAACTCCAAACTAGGTAAGGCCCCAAGCACCTCAGACTGGGAAAACCCAGTGAGTTATAGTCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTTTAGTGACACAAGGCCTTTTCAAGGTGCAAGTGGTTCCAGAAGAGCGATTTTGCTCGGTGTCAAGCTaGTCATTGGATTTCCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: LLVTQGLFKVQVVPEERFCSVSS*SLDFPL Trigger: AAGTGGGAAATCCAATGACAAGCTTGACACCGAGCA...AAATCGCTCTTCTGGAACCACTTGCACCTTGAAAAGGCCTTGTGTCACTAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR-3UTR CAA 90 bp | TTAGAGGCATTTGTCCTCTGGCTTCATCAGGCCTCACTCCATCAGTTTTCTGGTCTTAGCCACAGCTTTTaGAAGGAAGGGCTCTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: LEAFVLWLHQASLHQFSGLSHSF*KEGLLF Trigger: AAATAAGAGCCCTTCCTTCAAAAAGCTGTGGCTAAG...ACCAGAAAACTGATGGAGTGAGGCCTGATGAAGCCAGAGGACAAATGCCTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCACTATTCCTCCAAAGCACAGGAATTAGAGGCATTTGTCCTCTGGCTTCATTCCCACCCTTATGTTaGCAGGGAAGACAATTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LPLFLQSTGIRGICPLASFPPLC*QGRQFL Trigger: TAAGAATTGTCTTCCCTGCAAACATAAGGGTGGGAA...TGAAGCCAGAGGACAAATGCCTCTAATTCCTGTGCTTTGGAGGAATAGTGGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR TCA 72 bp | AGTTTAAGAATTTGCTGTCAAGTCAGGCAGTGGTCATaGTGGTGCACGCCATTAATCTCAGTACTTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLRICCQVRQWS*WCTPLISVLGR Trigger: CCTCCCAAGTACTGAGATTAATGGCGTGCACCATCATGACCACTGCCTGACTTGACAGCAAATTCTTAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR TCA 72 bp | AGGATGGTTTATTCAATGGTGTCCACAAATAGTGAATaGAAAAGACTGGGGATGTGGCTCCGTGGGAGCGTA | + |
|
Preference number: 3 (lower is better) Translates to: RMVYSMVSTNSE*KRLGMWLRGSV Trigger: TACGCTCCCACGGAGCCACATCCCCAGTCTTTTTCATTCACTATTTGTGGACACCATTGAATAAACCATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR GCA 72 bp | CTTCACAAAGCACGTGGCTTTGATCCACCTTCGAGTTaGTCTGCGTTCTCTTTGCAGGCAAGTTTTCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: LHKARGFDPPSS*SAFSLQASFHF Trigger: AAAATGAAAACTTGCCTGCAAAGAGAACGCAGAGCAACTCGAAGGTGGATCAAAGCCACGTGCTTTGTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020346.6 |
||
| 3UTR CCA 72 bp | ATTCAATGGTGTCCACAAATAGTGAATGAAAAAGACTaGGGATGTGGCTCCGTGGGAGCGTATACATGCATG | + |
|
Preference number: 3 (lower is better) Translates to: IQWCPQIVNEKD*GCGSVGAYTCM Trigger: CATGCATGTATACGCTCCCACGGAGCCACATCCCCAGTCTTTTTCATTCACTATTTGTGGACACCATTGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR CCA 72 bp | AAGGTCTCAAATAGCCTAAGCTGGCTATTTGAGTTTTaGGCCCTCCCACTATTCCTCCAAAGCACAGGAATT | + |
|
Preference number: 3 (lower is better) Translates to: KVSNSLSWLFEF*ALPLFLQSTGI Trigger: AATTCCTGTGCTTTGGAGGAATAGTGGGAGGGCCCAAAACTCAAATAGCCAGCTTAGGCTATTTGAGACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCCAGTCTGAGGTGCTTGGGGCCTTACCTAGTTTGGAGTTTCAAAGGTATTTGCTCTGCGTTCTCTTaGCAGGCAAGTTTTCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: FPSLRCLGPYLVWSFKGICSAFS*QASFHF Trigger: AAAATGAAAACTTGCCTGCAAAGAGAACGCAGAGCA...AATACCTTTGAAACTCCAAACTAGGTAAGGCCCCAAGCACCTCAGACTGGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020346.6 |
||
| 3UTR-3UTR CAA 90 bp | GTTAGCTCCTACTTCACATGTTCTTTAGAATGTAATATCCCAGCTTTGGTGCGGGTGTCAAGCTTGTCATaGGATTTCCCACTTCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VSSYFTCSLECNIPALVRVSSLS*DFPLPQ Trigger: CTGAGGAAGTGGGAAATCCAATGACAAGCTTGACAC...CCGCACCAAAGCTGGGATATTACATTCTAAAGAACATGTGAAGTAGGAGCTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCCAGTCTGAGGTGCTTGGGGCCTTACCTAGTTTGGAGTTTCAAAGGTATTGATTGCTTAAGGCAGTaGGTAAAATCTGTTCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: FPSLRCLGPYLVWSFKGIDCLRQ*VKSVLR Trigger: TCTCAGAACAGATTTTACCAACTGCCTTAAGCAATC...AATACCTTTGAAACTCCAAACTAGGTAAGGCCCCAAGCACCTCAGACTGGGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020346.6 |
||
| 3UTR-3UTR CAA 90 bp | TTAGAGGCATTTGTCCTCTGGCTTCATCAGGCCTCACTCCATCAGTTTTCTGGTGAAGACTATGCAACTTaGCCAAAAGTGCTTGTATTT | + |
|
Preference number: 3 (lower is better) Translates to: LEAFVLWLHQASLHQFSGEDYAT*PKVLVF Trigger: AAATACAAGCACTTTTGGCAAAGTTGCATAGTCTTC...ACCAGAAAACTGATGGAGTGAGGCCTGATGAAGCCAGAGGACAAATGCCTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCCCACCTCTCACCAGCCATTCTAAGAAAAATCCGTTTGATTTCAAAAGGATTTCGACGCTTTCCATaGAGTTTCAACTCAACAGCG | + |
|
Preference number: 3 (lower is better) Translates to: SAHLSPAILRKIRLISKGFRRFP*SFNSTA Trigger: CGCTGTTGAGTTGAAACTCAATGGAAAGCGTCGAAA...TCCTTTTGAAATCAAACGGATTTTTCTTAGAATGGCTGGTGAGAGGTGGGCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218842.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCCAAGAGATGGCAGAGAATTCAAATTCCATCTCTGTGTAGGAAAGGTTTAGATCAGTTTAAGAATTaGCTGTCAAGTCAGGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: QPKRWQRIQIPSLCRKGLDQFKN*LSSQAV Trigger: CACTGCCTGACTTGACAGCAAATTCTTAAACTGATC...TAAACCTTTCCTACACAGAGATGGAATTTGAATTCTCTGCCATCTCTTGGGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR TCA 72 bp | TTCCATCTCTGTGTAGGAAAGGTTTACAGTCACGTGTaGTCAGGCATGTTATGTTCATATGGTAAGCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: FHLCVGKVYSHV*SGMLCSYGKLT Trigger: TGTGAGCTTACCATATGAACATAACATGCCTGATCACACGTGACTGTAAACCTTTCCTACACAGAGATGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR TCA 72 bp | CTAGGCAGCCATTTTAAAGGTGGACAGATGTGTTATTaGTACAGTCATGTAAAGAGGCTTTGCAGCATGCTA | + |
|
Preference number: 3 (lower is better) Translates to: LGSHFKGGQMCY*YSHVKRLCSML Trigger: TAGCATGCTGCAAAGCCTCTTTACATGACTGTATCAATAACACATCTGTCCACCTTTAAAATGGCTGCCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCAAGGGTGATCACATCTACAAAAGAGTTTATAGAGTATTGGTCATAAGTATCACAAAGCACGTGGCTTaGATCCACCTTCGAGTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: TKGDHIYKRVYRVLVISITKHVA*IHLRVA Trigger: AGCAACTCGAAGGTGGATCAAAGCCACGTGCTTTGT...GATACTTATGACCAATACTCTATAAACTCTTTTGTAGATGTGATCACCCTTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020346.6 |
||
| 3UTR-3UTR CAA 90 bp | TTCATCAGGCCTCACTCCATCAGTTTTCTGGTTTACAGTCAACTAAATAAATCTTGCTCGGTGTCAAGCTaGTCATTGGATTTCCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: FIRPHSISFLVYSQLNKSCSVSS*SLDFPL Trigger: AAGTGGGAAATCCAATGACAAGCTTGACACCGAGCA...AGATTTATTTAGTTGACTGTAAACCAGAAAACTGATGGAGTGAGGCCTGATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCCAAGAGATGGCAGAGAATTCAAATTCCATCTCTGTGTAGGAAAGGTTTAGGTAAGCTCACAAACTaGAAGAAGAACTACATAACT | + |
|
Preference number: 3 (lower is better) Translates to: QPKRWQRIQIPSLCRKGLGKLTN*KKNYIT Trigger: AGTTATGTAGTTCTTCTTCAAGTTTGTGAGCTTACC...TAAACCTTTCCTACACAGAGATGGAATTTGAATTCTCTGCCATCTCTTGGGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR TCA 72 bp | ATATCCCAGCTTTGGTGCGGAATGCTTTTACTTTTATaGACATATCACTTGTCATTCCTATTTGACAGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: ISQLWCGMLLLL*TYHLSFLFDSS Trigger: GCTGCTGTCAAATAGGAATGACAAGTGATATGTTCATAAAAGTAAAAGCATTCCGCACCAAAGCTGGGATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR GCA 72 bp | GTACCGAAGCATCTTACACCTATTTCGTTCATAGAATaGATCTCATATTCTAATAAGCACCGTTCTTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VPKHLTPISFIE*ISYSNKHRSFG Trigger: CCCAAAAGAACGGTGCTTATTAGAATATGAGATGCATTCTATGAACGAAATAGGTGTAAGATGCTTCGGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218842.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCAAGGGTGATCACATCTACAAAAGAGTTTATAGAGTATTGGTCATAAGTATCTTCCCACCCTTATGTTaGCAGGGAAGACAATTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: TKGDHIYKRVYRVLVISIFPPLC*QGRQFL Trigger: TAAGAATTGTCTTCCCTGCAAACATAAGGGTGGGAA...GATACTTATGACCAATACTCTATAAACTCTTTTGTAGATGTGATCACCCTTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
||
| 3UTR GCA 72 bp | CTTGTTCAAGACTTTTTAAATCTTCCAGAGGAAGATTaGTTAAGGCAGTTGGTAAAATCTGTTCTGAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: LVQDFLNLPEED*LRQLVKSVLRC Trigger: GCATCTCAGAACAGATTTTACCAACTGCCTTAAGCAATCTTCCTCTGGAAGATTTAAAAAGTCTTGAACAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020346.6 |
||
| 3UTR TCA 72 bp | AAAATATCAAGTTTCAAATATTCCCGTTCTCAGCTTTaGCCTACTTCTAGCTGTGTCTTTCTTTCAGCAATC | + |
|
Preference number: 3 (lower is better) Translates to: KISSFKYSRSQL*PTSSCVFLSAI Trigger: GATTGCTGAAAGAAAGACACAGCTAGAAGTAGGTCAAAGCTGAGAACGGGAATATTTGAAACTTGATATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218842.2 |
||
| CDS-3UTR CCA 90 bp | TTCGCAGCTGGGCAAGTGACCAAAGTCAGAGGACCTTGTTCTTCTGACACGACCCCGCCGCGGCGCAATTaGTCGGCATTTCCCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FAAGQVTKVRGPCSSDTTPPRRN*SAFPRA Trigger: GGCCCGGGGAAATGCCGACCAATTGCGCCGCGGCGG...GGTCGTGTCAGAAGAACAAGGTCCTCTGACTTTGGTCACTTGCCCAGCTGCGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218989.2 |
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| 3UTR CAA 72 bp | CGGACCCACACACAAAGGACAAGAGCGAGGCTCCCCTaGCTCTTCGCAGCTGGGCAAGTGACCAAAGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: RTHTQRTRARLP*LFAAGQVTKVR Trigger: TCTGACTTTGGTCACTTGCCCAGCTGCGAAGAGCAAGGGGAGCCTCGCTCTTGTCCTTTGTGTGTGGGTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218989.2 |
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| CDS-3UTR CCA 90 bp | AAGATAGCTACCAAGGGTGATCACATCTACAAAAGAGTTTATAGAGTATTGGTCCCGCCGCGGCGCAATTaGTCGGCATTTCCCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: KIATKGDHIYKRVYRVLVPPRRN*SAFPRA Trigger: GGCCCGGGGAAATGCCGACCAATTGCGCCGCGGCGG...GACCAATACTCTATAAACTCTTTTGTAGATGTGATCACCCTTGGTAGCTATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020346.6 |
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| 3UTR CAA 72 bp | GACCCTCATGTAAGGCACTTCTGCTCGGTGTCAAGCTaGTCATTGGATTTCCCACTTCCTCAGTCTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: DPHVRHFCSVSS*SLDFPLPQSPE Trigger: CTCTGGAGACTGAGGAAGTGGGAAATCCAATGACAAGCTTGACACCGAGCAGAAGTGCCTTACATGAGGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR CAA 72 bp | CATGTAAGGCACTTCTGCTCGGTGTCAAGCTTGTCATaGGATTTCCCACTTCCTCAGTCTCCAGAGAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: HVRHFCSVSSLS*DFPLPQSPESD Trigger: GTCACTCTCTGGAGACTGAGGAAGTGGGAAATCCAATGACAAGCTTGACACCGAGCAGAAGTGCCTTACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR CAA 72 bp | TTTGCAGGGAAGACAATTCTTACTAGACAGTGCTGGTaGCTGGGTGGGACAGAGAGGAACAGCCCAAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: FAGKTILTRQCW*LGGTERNSPRD Trigger: ATCTCTTGGGCTGTTCCTCTCTGTCCCACCCAGCAACCAGCACTGTCTAGTAAGAATTGTCTTCCCTGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| CDS-3UTR TCA 90 bp | AAAGCACGTGGCTTTGATCCACCTTCGAGTTGCTCTGCGTTCTCTTTGCAGGCAGAAGATTCCTTGACTTaGGTTTCTGTGGAAGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: KARGFDPPSSCSAFSLQAEDSLT*VSVEAD Trigger: ATCAGCTTCCACAGAAACTCAAGTCAAGGAATCTTC...TGCCTGCAAAGAGAACGCAGAGCAACTCGAAGGTGGATCAAAGCCACGTGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020346.6 |
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| CDS-3UTR CCA 90 bp | GGAAAAGGAGCAAATGTTTCCAGATGTGCGGACCCACACACAAAGGACAAGAGCTCCCAGGTTTACCTGTaGAAGCTGATGTTAATGTGC | + |
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Preference number: 4 (lower is better) Translates to: GKGANVSRCADPHTKDKSSQVYL*KLMLMC Trigger: GCACATTAACATCAGCTTCCACAGGTAAACCTGGGA...GCTCTTGTCCTTTGTGTGTGGGTCCGCACATCTGGAAACATTTGCTCCTTTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218989.2 |
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| CDS-3UTR GCA 90 bp | CTTTTAGTGACACAAGGCCTTTTCAAGGTGCAAGTGGTTCCAGAAGAGCGATTTACCTTCGAGTTGCTCTaGGTTCTCTTTGCAGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: LLVTQGLFKVQVVPEERFTFELL*VLFAGK Trigger: CTTGCCTGCAAAGAGAACGCAGAGCAACTCGAAGGT...AAATCGCTCTTCTGGAACCACTTGCACCTTGAAAAGGCCTTGTGTCACTAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218842.2 |
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| 3UTR CAA 72 bp | TTACTTGCTTCTAAGCTCTTCACAAAGCACGTGGCTTaGATCCACCTTCGAGTTGCTCTGCGTTCTCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: LLASKLFTKHVA*IHLRVALRSLC Trigger: GCAAAGAGAACGCAGAGCAACTCGAAGGTGGATCAAAGCCACGTGCTTTGTGAAGAGCTTAGAAGCAAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020346.6 |
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| CDS-3UTR CCA 90 bp | GAGGCATTTGTCCTCTGGCTTCATCAGGCCTCACTCCATCAGTTTTCTGGTTTATCCAAAGGAAACCTGTaGAAGCTGATGTTAATGTGC | + |
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Preference number: 4 (lower is better) Translates to: EAFVLWLHQASLHQFSGLSKGNL*KLMLMC Trigger: GCACATTAACATCAGCTTCCACAGGTTTCCTTTGGA...TAAACCAGAAAACTGATGGAGTGAGGCCTGATGAAGCCAGAGGACAAATGCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218842.2 |
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| 3UTR CAA 72 bp | GACTATAACTCACTGGGTTTTCCCAGTCTGAGGTGCTaGGGGCCTTACCTAGTTTGGAGTTTCAAAGGTATT | + |
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Preference number: 4 (lower is better) Translates to: DYNSLGFPSLRC*GPYLVWSFKGI Trigger: AATACCTTTGAAACTCCAAACTAGGTAAGGCCCCAAGCACCTCAGACTGGGAAAACCCAGTGAGTTATAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| 3UTR CAA 72 bp | CGAGTAAACAAAGAGATCTTCTCGTGTAAATCCAGCTaGGAAGGAGGAAGGCAGAGATCGGAAAACAACTGT | + |
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Preference number: 4 (lower is better) Translates to: RVNKEIFSCKSS*EGGRQRSENNC Trigger: ACAGTTGTTTTCCGATCTCTGCCTTCCTCCTTCCAAGCTGGATTTACACGAGAAGATCTCTTTGTTTACTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218842.2 |
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| CDS-3UTR TCA 90 bp | TCTGCCCACCTCTCACCAGCCATTCTAAGAAAAATCCGTTTGATTTCAAAAGGAGGCTTCAAAGTGCTTTaGGCAAAGAAAAGTGTGTTT | + |
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Preference number: 4 (lower is better) Translates to: SAHLSPAILRKIRLISKGGFKVL*AKKSVF Trigger: AAACACACTTTTCTTTGCTCAAAGCACTTTGAAGCC...TCCTTTTGAAATCAAACGGATTTTTCTTAGAATGGCTGGTGAGAGGTGGGCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000218842.2 |
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| 3UTR CAA 72 bp | GGAAGGCAGAGATCGGAAAACAACTGTTTCATGATTTaGCTCAGAAACCTATCAATAGGGTTATGTGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: GRQRSENNCFMI*LRNLSIGLCVS Trigger: GGAAACACATAACCCTATTGATAGGTTTCTGAGCAAAATCATGAAACAGTTGTTTTCCGATCTCTGCCTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218842.2 |
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| CDS-3UTR GCA 90 bp | GCTACCAAGGGTGATCACATCTACAAAAGAGTTTATAGAGTATTGGTCATAAGTCAGGAGGCTTCAAAGTaGTTTGAGCAAAGAAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: ATKGDHIYKRVYRVLVISQEASK*FEQRKV Trigger: CACTTTTCTTTGCTCAAAGCACTTTGAAGCCTCCTG...ACTTATGACCAATACTCTATAAACTCTTTTGTAGATGTGATCACCCTTGGTAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218842.2 |
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| CDS-3UTR TCA 90 bp | ATCAGGCCTCACTCCATCAGTTTTCTGGTTTACAGTCAACTAAATAAATCTATCCTTCAGAAGATTCCTTaGCTTGAGTTTCAGAGACTT | + |
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Preference number: 4 (lower is better) Translates to: IRPHSISFLVYSQLNKSILQKIP*LEFQRL Trigger: AAGTCTCTGAAACTCAAGTCAAGGAATCTTCTGAAG...GATAGATTTATTTAGTTGACTGTAAACCAGAAAACTGATGGAGTGAGGCCTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218842.2 |
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| CDS-3UTR GCA 90 bp | ATCAGGCCTCACTCCATCAGTTTTCTGGTTTACAGTCAACTAAATAAATCTATCCTTCCAGAGGAAGATTaGTTAAGGCAGTTGGTAAAA | + |
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Preference number: 4 (lower is better) Translates to: IRPHSISFLVYSQLNKSILPEED*LRQLVK Trigger: TTTTACCAACTGCCTTAAGCAATCTTCCTCTGGAAG...GATAGATTTATTTAGTTGACTGTAAACCAGAAAACTGATGGAGTGAGGCCTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218842.2 |
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| CDS-3UTR CAA 90 bp | CTCGGAAAAGGAGCAAATGTTTCCAGATGTGCGGACCCACACACAAAGGACAAGCCCGCCGCGGCGCAATaGGTCGGCATTTCCCCGGGC | + |
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Preference number: 5 (lower is better) Translates to: LGKGANVSRCADPHTKDKPAAAQ*VGISPG Trigger: GCCCGGGGAAATGCCGACCAATTGCGCCGCGGCGGG...CTTGTCCTTTGTGTGTGGGTCCGCACATCTGGAAACATTTGCTCCTTTTCCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218989.2 |
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| CDS-3UTR CAA 90 bp | CAGCCCAAGAGATGGCAGAGAATTCAAATTCCATCTCTGTGTAGGAAAGGTTTACCCGCCGCGGCGCAATaGGTCGGCATTTCCCCGGGC | + |
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Preference number: 5 (lower is better) Translates to: QPKRWQRIQIPSLCRKGLPAAAQ*VGISPG Trigger: GCCCGGGGAAATGCCGACCAATTGCGCCGCGGCGGG...TAAACCTTTCCTACACAGAGATGGAATTTGAATTCTCTGCCATCTCTTGGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020346.6 |
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| CDS-3UTR CAA 90 bp | GAGGCATTTGTCCTCTGGCTTCATCAGGCCTCACTCCATCAGTTTTCTGGTTTAACAAAGCACGTGGCTTaGATCCACCTTCGAGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: EAFVLWLHQASLHQFSGLTKHVA*IHLRVA Trigger: AGCAACTCGAAGGTGGATCAAAGCCACGTGCTTTGT...TAAACCAGAAAACTGATGGAGTGAGGCCTGATGAAGCCAGAGGACAAATGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218842.2 |
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| CDS-3UTR CAA 90 bp | ACCAAGGGTGATCACATCTACAAAAGAGTTTATAGAGTATTGGTCATAAGTATCCCTGGCACAAAATTTTaGCGCCTAACCAGGCGAACC | + |
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Preference number: 5 (lower is better) Translates to: TKGDHIYKRVYRVLVISIPGTKF*RLTRRT Trigger: GGTTCGCCTGGTTAGGCGCAAAAATTTTGTGCCAGG...GATACTTATGACCAATACTCTATAAACTCTTTTGTAGATGTGATCACCCTTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000218842.2 |
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| CDS-3UTR CAA 90 bp | GTTAGCTCCTACTTCACATGTTCTTTAGAATGTAATATCCCAGCTTTGGTGCGGGTTGGAGGAAAACTGTaGTTTGTCTTCAGAAGATTC | + |
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Preference number: 5 (lower is better) Translates to: VSSYFTCSLECNIPALVRVGGKL*FVFRRF Trigger: GAATCTTCTGAAGACAAACAACAGTTTTCCTCCAAC...CCGCACCAAAGCTGGGATATTACATTCTAAAGAACATGTGAAGTAGGAGCTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| CDS-3UTR CAA 90 bp | TCTGCCCACCTCTCACCAGCCATTCTAAGAAAAATCCGTTTGATTTCAAAAGGAGATTGCTTAAGGCAGTaGGTAAAATCTGTTCTGAGA | + |
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Preference number: 5 (lower is better) Translates to: SAHLSPAILRKIRLISKGDCLRQ*VKSVLR Trigger: TCTCAGAACAGATTTTACCAACTGCCTTAAGCAATC...TCCTTTTGAAATCAAACGGATTTTTCTTAGAATGGCTGGTGAGAGGTGGGCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000218842.2 |
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| CDS-3UTR CAA 90 bp | ATCAGGCCTCACTCCATCAGTTTTCTGGTTTACAGTCAACTAAATAAATCTATCGTTGGAGGAAAACTGTaGTTTGTCTTCAGAAGATTC | + |
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Preference number: 5 (lower is better) Translates to: IRPHSISFLVYSQLNKSIVGGKL*FVFRRF Trigger: GAATCTTCTGAAGACAAACAACAGTTTTCCTCCAAC...GATAGATTTATTTAGTTGACTGTAAACCAGAAAACTGATGGAGTGAGGCCTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020346.6 ENSMUST00000218842.2 |
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| CDS-3UTR CAA 90 bp | AAGATAGCTACCAAGGGTGATCACATCTACAAAAGAGTTTATAGAGTATTGGTCAATTACATGGTCCAGTaGGAGGAAAACTGTTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: KIATKGDHIYKRVYRVLVNYMVQ*EENCCL Trigger: CAAACAACAGTTTTCCTCCAACTGGACCATGTAATT...GACCAATACTCTATAAACTCTTTTGTAGATGTGATCACCCTTGGTAGCTATCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218842.2 |
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| CDS-3UTR CAA 90 bp | ACCAAGGGTGATCACATCTACAAAAGAGTTTATAGAGTATTGGTCATAAGTATCTGCTCTGCGTTCTCTTaGCAGGCAAGTTTTCATTTT | + |
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Preference number: 5 (lower is better) Translates to: TKGDHIYKRVYRVLVISICSAFS*QASFHF Trigger: AAAATGAAAACTTGCCTGCAAAGAGAACGCAGAGCA...GATACTTATGACCAATACTCTATAAACTCTTTTGTAGATGTGATCACCCTTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218842.2 |
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