Pregenerated sensors for THAP11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036442Ensembl transcript IDs: ENSMUST00000040445.9
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAGAAGTGGTTTCCTCAAACCCACAGTCCCTTAAGAGTTCCATCTaGACCCCCTCCAGGGTAAGTTCCAAGTTCAGTGGTTCTGAAGCC | + |
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Preference number: 1 (lower is better) Translates to: EEVVSSNPQSLKSSI*TPSRVSSKFSGSEA Trigger: GGCTTCAGAACCACTGAACTTGGAACTTACCCTGGAGGGGGTGCAGATGGAACTCTTAAGGGACTGTGGGTTTGAGGAAACCACTTCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| 3UTR TCA 90 bp | TTCCATCTGCACCCCCTCCAGGGTAAGTTCCAAGTTCAGTGGTTCTaGAGCCTGTGTATAACCAGAATCTGCAACATAAACTGGGGAGTG | + |
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Preference number: 1 (lower is better) Translates to: FHLHPLQGKFQVQWF*SLCITRICNINWGV Trigger: CACTCCCCAGTTTATGTTGCAGATTCTGGTTATACACAGGCTTCAGAACCACTGAACTTGGAACTTACCCTGGAGGGGGTGCAGATGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| 3UTR CCA 90 bp | GCTAGTCCCCATCAGAATCACAGACTGCACCTGAACCGGGTAGCATaGAAAGGAGAAACGATGTTACTGAGATCTCTTATCACTACACAC | + |
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Preference number: 1 (lower is better) Translates to: ASPHQNHRLHLNRVA*KGETMLLRSLITTH Trigger: GTGTGTAGTGATAAGAGATCTCAGTAACATCGTTTCTCCTTTCCATGCTACCCGGTTCAGGTGCAGTCTGTGATTCTGATGGGGACTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| 3UTR TCA 90 bp | TTTGTAACCAGTAGCAAACATAACGAGATAAACCTAAGTCCCTGGTaGGCTGGATCTCCATCAGCAAGTCACCCAGAGCCCTCTCATAAA | + |
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Preference number: 1 (lower is better) Translates to: FVTSSKHNEINLSPW*AGSPSASHPEPSHK Trigger: TTTATGAGAGGGCTCTGGGTGACTTGCTGATGGAGATCCAGCTCACCAGGGACTTAGGTTTATCTCGTTATGTTTGCTACTGGTTACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| 3UTR GCA 90 bp | CAGAATCTGCAACATAAACTGGGGAGTGAGAGACAAAGTCATAACTaGTGGTGTCACCAGATTCTGAAGTCCCCAACTCTTACTTCACGA | + |
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Preference number: 1 (lower is better) Translates to: QNLQHKLGSERQSHN*WCHQILKSPTLTSR Trigger: TCGTGAAGTAAGAGTTGGGGACTTCAGAATCTGGTGACACCAGCAGTTATGACTTTGTCTCTCACTCCCCAGTTTATGTTGCAGATTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| 3UTR CCA 90 bp | AATCTGCAACATAAACTGGGGAGTGAGAGACAAAGTCATAACTGCTaGTGTCACCAGATTCTGAAGTCCCCAACTCTTACTTCACGAGGA | + |
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Preference number: 1 (lower is better) Translates to: NLQHKLGSERQSHNC*CHQILKSPTLTSRG Trigger: TCCTCGTGAAGTAAGAGTTGGGGACTTCAGAATCTGGTGACACCAGCAGTTATGACTTTGTCTCTCACTCCCCAGTTTATGTTGCAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| 3UTR-3UTR TCA 90 bp | CACAGATCAGCTAGTCCCCATCAGAATCACAGACTGCACCTGAACCGGGTAGCAGATTGCTGGCCAACCTaGAGAAGTGGTTTCCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: HRSASPHQNHRLHLNRVADCWPT*RSGFLK Trigger: TTTGAGGAAACCACTTCTTCAGGTTGGCCAGCAATC...TGCTACCCGGTTCAGGTGCAGTCTGTGATTCTGATGGGGACTAGCTGATCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGGTGAGCTGGATCTCCATCAGCAAGTCACCCAGAGCCCTCTCATAAATGACGCCAACCTGAAGAAGTaGTTTCCTCAAACCCACAGT | + |
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Preference number: 2 (lower is better) Translates to: PGELDLHQQVTQSPLINDANLKK*FPQTHS Trigger: ACTGTGGGTTTGAGGAAACCACTTCTTCAGGTTGGC...GTCATTTATGAGAGGGCTCTGGGTGACTTGCTGATGGAGATCCAGCTCACCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| 3UTR-3UTR GCA 90 bp | AAGCTGTCTCTGATTGCTGGCCAACCTGAAGAAGTGGTTTCCTCAAACCCACAGGGGGAGTACAACATTTaGCTGAGGATTCCTTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: KLSLIAGQPEEVVSSNPQGEYNI*LRIPWA Trigger: AGCCCAAGGAATCCTCAGGCAAATGTTGTACTCCCC...CTGTGGGTTTGAGGAAACCACTTCTTCAGGTTGGCCAGCAATCAGAGACAGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| 3UTR-3UTR TCA 90 bp | CCATCAGAATCACAGACTGCACCTGAACCGGGTAGCATGGAAAGGAGAAACGATAGTACAACATTTGCCTaGGGATTCCTTGGGCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: PSESQTAPEPGSMERRNDSTTFA*GFLGLE Trigger: TTCCAGCCCAAGGAATCCTCAGGCAAATGTTGTACT...ATCGTTTCTCCTTTCCATGCTACCCGGTTCAGGTGCAGTCTGTGATTCTGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| 3UTR-3UTR TCA 90 bp | AAGCTGTCTCTGATTGCTGGCCAACCTGAAGAAGTGGTTTCCTCAAACCCACAGCAAGTTCAGTGGTTCTaGAGCCTGTGTATAACCAGA | + |
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Preference number: 2 (lower is better) Translates to: KLSLIAGQPEEVVSSNPQQVQWF*SLCITR Trigger: TCTGGTTATACACAGGCTTCAGAACCACTGAACTTG...CTGTGGGTTTGAGGAAACCACTTCTTCAGGTTGGCCAGCAATCAGAGACAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| 3UTR-3UTR TCA 90 bp | CCTGGTGAGCTGGATCTCCATCAGCAAGTCACCCAGAGCCCTCTCATAAATGACGAGAAACGATGTTACTaGGATCTCTTATCACTACAC | + |
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Preference number: 2 (lower is better) Translates to: PGELDLHQQVTQSPLINDEKRCY*DLLSLH Trigger: GTGTAGTGATAAGAGATCTCAGTAACATCGTTTCTC...GTCATTTATGAGAGGGCTCTGGGTGACTTGCTGATGGAGATCCAGCTCACCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| 3UTR-3UTR CCA 90 bp | AAGCTGTCTCTGATTGCTGGCCAACCTGAAGAAGTGGTTTCCTCAAACCCACAGCAAAGTCATAACTGCTaGTGTCACCAGATTCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: KLSLIAGQPEEVVSSNPQQSHNC*CHQILK Trigger: CTTCAGAATCTGGTGACACCAGCAGTTATGACTTTG...CTGTGGGTTTGAGGAAACCACTTCTTCAGGTTGGCCAGCAATCAGAGACAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| 3UTR-3UTR TCA 90 bp | CTGAACCGGGTAGCATGGAAAGGAGAAACGATGTTACTGAGATCTCTTATCACTGGTGTCACCAGATTCTaGAGTCCCCAACTCTTACTT | + |
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Preference number: 2 (lower is better) Translates to: LNRVAWKGETMLLRSLITGVTRF*SPQLLL Trigger: AAGTAAGAGTTGGGGACTTCAGAATCTGGTGACACC...AGTGATAAGAGATCTCAGTAACATCGTTTCTCCTTTCCATGCTACCCGGTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| 3UTR-3UTR CCA 90 bp | CTGAACCGGGTAGCATGGAAAGGAGAAACGATGTTACTGAGATCTCTTATCACTATCTGCAACATAAACTaGGGAGTGAGAGACAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: LNRVAWKGETMLLRSLITICNIN*GVRDKV Trigger: GACTTTGTCTCTCACTCCCCAGTTTATGTTGCAGAT...AGTGATAAGAGATCTCAGTAACATCGTTTCTCCTTTCCATGCTACCCGGTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| 3UTR-3UTR CAA 90 bp | CCATCAGAATCACAGACTGCACCTGAACCGGGTAGCATGGAAAGGAGAAACGATTGGGGAGTACAACATTaGCCTGAGGATTCCTTGGGC | + |
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Preference number: 3 (lower is better) Translates to: PSESQTAPEPGSMERRNDWGVQH*PEDSLG Trigger: GCCCAAGGAATCCTCAGGCAAATGTTGTACTCCCCA...ATCGTTTCTCCTTTCCATGCTACCCGGTTCAGGTGCAGTCTGTGATTCTGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| 3UTR GCA 72 bp | GTTTCCTCAAACCCACAGTCCCTTAAGAGTTCCATCTaGACCCCCTCCAGGGTAAGTTCCAAGTTCAGTGGT | + |
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Preference number: 3 (lower is better) Translates to: VSSNPQSLKSSI*TPSRVSSKFSG Trigger: ACCACTGAACTTGGAACTTACCCTGGAGGGGGTGCAGATGGAACTCTTAAGGGACTGTGGGTTTGAGGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| 3UTR-3UTR CAA 90 bp | GAGAGACAAAGTCATAACTGCTGGTGTCACCAGATTCTGAAGTCCCCAACTCTTTTGCCTGAGGATTCCTaGGGCTGGAAGGAGTCACGA | + |
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Preference number: 3 (lower is better) Translates to: ERQSHNCWCHQILKSPTLLPEDS*GWKESR Trigger: TCGTGACTCCTTCCAGCCCAAGGAATCCTCAGGCAA...AAGAGTTGGGGACTTCAGAATCTGGTGACACCAGCAGTTATGACTTTGTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| 3UTR TCA 72 bp | AGTAGCAAACATAACGAGATAAACCTAAGTCCCTGGTaGGCTGGATCTCCATCAGCAAGTCACCCAGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: SSKHNEINLSPW*AGSPSASHPEP Trigger: GGGCTCTGGGTGACTTGCTGATGGAGATCCAGCTCACCAGGGACTTAGGTTTATCTCGTTATGTTTGCTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| 3UTR GCA 72 bp | CAACATAAACTGGGGAGTGAGAGACAAAGTCATAACTaGTGGTGTCACCAGATTCTGAAGTCCCCAACTCTT | + |
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Preference number: 3 (lower is better) Translates to: QHKLGSERQSHN*WCHQILKSPTL Trigger: AAGAGTTGGGGACTTCAGAATCTGGTGACACCAGCAGTTATGACTTTGTCTCTCACTCCCCAGTTTATGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| 3UTR CCA 72 bp | CATAAACTGGGGAGTGAGAGACAAAGTCATAACTGCTaGTGTCACCAGATTCTGAAGTCCCCAACTCTTACT | + |
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Preference number: 3 (lower is better) Translates to: HKLGSERQSHNC*CHQILKSPTLT Trigger: AGTAAGAGTTGGGGACTTCAGAATCTGGTGACACCAGCAGTTATGACTTTGTCTCTCACTCCCCAGTTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR TCA 90 bp | CACAGATCAGCTAGTCCCCATCAGAATCACAGACTGCACCTGAACCGGGTAGCAGGAGCTTGGCCTCGGTaGGACGCAGATGGCGGATGC | + |
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Preference number: 4 (lower is better) Translates to: HRSASPHQNHRLHLNRVAGAWPR*DADGGC Trigger: GCATCCGCCATCTGCGTCTCACCGAGGCCAAGCTCC...TGCTACCCGGTTCAGGTGCAGTCTGTGATTCTGATGGGGACTAGCTGATCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR GCA 90 bp | CCATCAGAATCACAGACTGCACCTGAACCGGGTAGCATGGAAAGGAGAAACGATCTGCCTACGGCGGGCTaGCGCAGCTCCCGCAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: PSESQTAPEPGSMERRNDLPTAG*RSSRRS Trigger: AGACCTGCGGGAGCTGCGGCAGCCCGCCGTAGGCAG...ATCGTTTCTCCTTTCCATGCTACCCGGTTCAGGTGCAGTCTGTGATTCTGATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR TCA 90 bp | CACAGATCAGCTAGTCCCCATCAGAATCACAGACTGCACCTGAACCGGGTAGCATGGAGAAGCACCCACTaGCGCCAGCACGGGACACGT | + |
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Preference number: 4 (lower is better) Translates to: HRSASPHQNHRLHLNRVAWRSTH*RQHGTR Trigger: ACGTGTCCCGTGCTGGCGTCAGTGGGTGCTTCTCCA...TGCTACCCGGTTCAGGTGCAGTCTGTGATTCTGATGGGGACTAGCTGATCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR TCA 90 bp | CACAGATCAGCTAGTCCCCATCAGAATCACAGACTGCACCTGAACCGGGTAGCACCTACCACCACCAGCTaGGGGCCCAGAGTGCACTCA | + |
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Preference number: 4 (lower is better) Translates to: HRSASPHQNHRLHLNRVAPTTTS*GPRVHS Trigger: TGAGTGCACTCTGGGCCCTCAGCTGGTGGTGGTAGG...TGCTACCCGGTTCAGGTGCAGTCTGTGATTCTGATGGGGACTAGCTGATCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR GCA 90 bp | CACAGATCAGCTAGTCCCCATCAGAATCACAGACTGCACCTGAACCGGGTAGCACCTGAAAGTGGACGCTaGAGAGACGGTGGCCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: HRSASPHQNHRLHLNRVAPESGR*RDGGRW Trigger: CCACCGGCCACCGTCTCTGCAGCGTCCACTTTCAGG...TGCTACCCGGTTCAGGTGCAGTCTGTGATTCTGATGGGGACTAGCTGATCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR GCA 90 bp | CCTGGTGAGCTGGATCTCCATCAGCAAGTCACCCAGAGCCCTCTCATAAATGACTGTTGTTGCTGCTGCTaGTGCCTACGGCGGGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: PGELDLHQQVTQSPLINDCCCCC*CLRRAA Trigger: GGCAGCCCGCCGTAGGCAGCAGCAGCAGCAACAACA...GTCATTTATGAGAGGGCTCTGGGTGACTTGCTGATGGAGATCCAGCTCACCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR GCA 90 bp | CCTGGTGAGCTGGATCTCCATCAGCAAGTCACCCAGAGCCCTCTCATAAATGACGAGGACGGAGACGGCTaGTGCTGTTGCAGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PGELDLHQQVTQSPLINDEDGDG*CCCSCC Trigger: GCAGCAGCTGCAACAGCAGCAGCCGTCTCCGTCCTC...GTCATTTATGAGAGGGCTCTGGGTGACTTGCTGATGGAGATCCAGCTCACCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR GCA 90 bp | CCTGGTGAGCTGGATCTCCATCAGCAAGTCACCCAGAGCCCTCTCATAAATGACGCTGCTCGTTCAGCTTaGGCAGGAGCTCCTCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: PGELDLHQQVTQSPLINDAARSA*AGAPPP Trigger: CGGAGGAGGAGCTCCTGCGCAAGCTGAACGAGCAGC...GTCATTTATGAGAGGGCTCTGGGTGACTTGCTGATGGAGATCCAGCTCACCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR CCA 90 bp | CACAGATCAGCTAGTCCCCATCAGAATCACAGACTGCACCTGAACCGGGTAGCAGACGGTGGCCGGTGGTaGGTTGGAAGGTGGAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: HRSASPHQNHRLHLNRVADGGRW*VGRWRS Trigger: GCTTCTCCACCTTCCAACCCACCACCGGCCACCGTC...TGCTACCCGGTTCAGGTGCAGTCTGTGATTCTGATGGGGACTAGCTGATCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR GCA 90 bp | CACAGATCAGCTAGTCCCCATCAGAATCACAGACTGCACCTGAACCGGGTAGCAGCACCGTGTAGGTCTTaGGGCCGCCCTGAAAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: HRSASPHQNHRLHLNRVAAPCRS*GRPESG Trigger: TCCACTTTCAGGGCGGCCGCAAGACCTACACGGTGC...TGCTACCCGGTTCAGGTGCAGTCTGTGATTCTGATGGGGACTAGCTGATCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR GCA 90 bp | CACAGATCAGCTAGTCCCCATCAGAATCACAGACTGCACCTGAACCGGGTAGCAGCCAAGATGTCCCGCTaGTCGTTCAGCTTGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: HRSASPHQNHRLHLNRVAAKMSR*SFSLRR Trigger: CCTGCGCAAGCTGAACGAGCAGCGGGACATCTTGGC...TGCTACCCGGTTCAGGTGCAGTCTGTGATTCTGATGGGGACTAGCTGATCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR CCA 90 bp | CCTGGTGAGCTGGATCTCCATCAGCAAGTCACCCAGAGCCCTCTCATAAATGACTGGCCGGTGGTGGGTTaGAAGGTGGAGAAGCACCCA | + |
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Preference number: 4 (lower is better) Translates to: PGELDLHQQVTQSPLINDWPVVG*KVEKHP Trigger: TGGGTGCTTCTCCACCTTCCAACCCACCACCGGCCA...GTCATTTATGAGAGGGCTCTGGGTGACTTGCTGATGGAGATCCAGCTCACCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR CCA 90 bp | CCTGGTGAGCTGGATCTCCATCAGCAAGTCACCCAGAGCCCTCTCATAAATGACAGAGACGGTGGCCGGTaGTGGGTTGGAAGGTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: PGELDLHQQVTQSPLINDRDGGR*WVGRWR Trigger: TCTCCACCTTCCAACCCACCACCGGCCACCGTCTCT...GTCATTTATGAGAGGGCTCTGGGTGACTTGCTGATGGAGATCCAGCTCACCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR CCA 90 bp | CCTGGTGAGCTGGATCTCCATCAGCAAGTCACCCAGAGCCCTCTCATAAATGACGGAGCTCCTCCTCCGTaGTACCCGAGGACAAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: PGELDLHQQVTQSPLINDGAPPP*YPRTRS Trigger: ACTCCTTGTCCTCGGGTACCACGGAGGAGGAGCTCC...GTCATTTATGAGAGGGCTCTGGGTGACTTGCTGATGGAGATCCAGCTCACCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR TCA 90 bp | CCATCAGAATCACAGACTGCACCTGAACCGGGTAGCATGGAAAGGAGAAACGATCACGGGACACGTTCTTaGGCCAGAGGCGCCGCAACT | + |
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Preference number: 4 (lower is better) Translates to: PSESQTAPEPGSMERRNDHGTRS*ARGAAT Trigger: AGTTGCGGCGCCTCTGGCTCAAGAACGTGTCCCGTG...ATCGTTTCTCCTTTCCATGCTACCCGGTTCAGGTGCAGTCTGTGATTCTGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR TCA 90 bp | AAGCTGTCTCTGATTGCTGGCCAACCTGAAGAAGTGGTTTCCTCAAACCCACAGGTCTTGCGGCCGCCCTaGAAGTGGACGCTGCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: KLSLIAGQPEEVVSSNPQVLRPP*KWTLQR Trigger: TCTCTGCAGCGTCCACTTTCAGGGCGGCCGCAAGAC...CTGTGGGTTTGAGGAAACCACTTCTTCAGGTTGGCCAGCAATCAGAGACAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR GCA 90 bp | CCTGGTGAGCTGGATCTCCATCAGCAAGTCACCCAGAGCCCTCTCATAAATGACTGCTGTTGTTGTTGCTaGTGCTGCTGCCTACGGCGG | + |
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Preference number: 4 (lower is better) Translates to: PGELDLHQQVTQSPLINDCCCCC*CCCLRR Trigger: CCGCCGTAGGCAGCAGCAGCAGCAACAACAACAGCA...GTCATTTATGAGAGGGCTCTGGGTGACTTGCTGATGGAGATCCAGCTCACCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR TCA 90 bp | AAGCTGTCTCTGATTGCTGGCCAACCTGAAGAAGTGGTTTCCTCAAACCCACAGCGCCTTGTCCCGGTGTaGATTGTTGTAGCAGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: KLSLIAGQPEEVVSSNPQRLVPV*IVVAAR Trigger: CCGGGCTGCTACAACAATTCACACCGGGACAAGGCG...CTGTGGGTTTGAGGAAACCACTTCTTCAGGTTGGCCAGCAATCAGAGACAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR TCA 90 bp | CCTGGTGAGCTGGATCTCCATCAGCAAGTCACCCAGAGCCCTCTCATAAATGACCGTGCTTCTTACGGATaGCAGCCATGGCAAGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: PGELDLHQQVTQSPLINDRASYG*QPWQAD Trigger: GTCTGCTTGCCATGGCTGTCATCCGTAAGAAGCACG...GTCATTTATGAGAGGGCTCTGGGTGACTTGCTGATGGAGATCCAGCTCACCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR GCA 90 bp | GAGAGACAAAGTCATAACTGCTGGTGTCACCAGATTCTGAAGTCCCCAACTCTTTGTTGCTGCTGCTGCTaGCTACGGCGGGCTGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: ERQSHNCWCHQILKSPTLCCCCC*LRRAAA Trigger: TGCGGCAGCCCGCCGTAGGCAGCAGCAGCAGCAACA...AAGAGTTGGGGACTTCAGAATCTGGTGACACCAGCAGTTATGACTTTGTCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR GCA 90 bp | AAGCTGTCTCTGATTGCTGGCCAACCTGAAGAAGTGGTTTCCTCAAACCCACAGGACGGAGACGGCTGCTaGTGTTGCAGCTGCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: KLSLIAGQPEEVVSSNPQDGDGC*CCSCCC Trigger: ACAGCAGCAGCTGCAACAGCAGCAGCCGTCTCCGTC...CTGTGGGTTTGAGGAAACCACTTCTTCAGGTTGGCCAGCAATCAGAGACAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR CCA 90 bp | CCATCAGAATCACAGACTGCACCTGAACCGGGTAGCATGGAAAGGAGAAACGATCACGCAGCGGGAAAATaGTGGGAACGCGCACCGTGT | + |
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Preference number: 4 (lower is better) Translates to: PSESQTAPEPGSMERRNDHAAGK*WERAPC Trigger: ACACGGTGCGCGTTCCCACCATTTTCCCGCTGCGTG...ATCGTTTCTCCTTTCCATGCTACCCGGTTCAGGTGCAGTCTGTGATTCTGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR CCA 90 bp | CCTGGTGAGCTGGATCTCCATCAGCAAGTCACCCAGAGCCCTCTCATAAATGACTCGGTGAGACGCAGATaGCGGATGCTACCCTTCATC | + |
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Preference number: 4 (lower is better) Translates to: PGELDLHQQVTQSPLINDSVRRR*RMLPFI Trigger: GATGAAGGGTAGCATCCGCCATCTGCGTCTCACCGA...GTCATTTATGAGAGGGCTCTGGGTGACTTGCTGATGGAGATCCAGCTCACCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR GCA 90 bp | AAGCTGTCTCTGATTGCTGGCCAACCTGAAGAAGTGGTTTCCTCAAACCCACAGTGTTGTTGTTGCTGCTaGTGCTGCCTACGGCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: KLSLIAGQPEEVVSSNPQCCCCC*CCLRRA Trigger: AGCCCGCCGTAGGCAGCAGCAGCAGCAACAACAACA...CTGTGGGTTTGAGGAAACCACTTCTTCAGGTTGGCCAGCAATCAGAGACAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR CCA 90 bp | CTGAACCGGGTAGCATGGAAAGGAGAAACGATGTTACTGAGATCTCTTATCACTGGGTGGTCTGGGCAGTaGAGGAGGACGGAGACGGCT | + |
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Preference number: 4 (lower is better) Translates to: LNRVAWKGETMLLRSLITGWSGQ*RRTETA Trigger: AGCCGTCTCCGTCCTCCTCCACTGCCCAGACCACCC...AGTGATAAGAGATCTCAGTAACATCGTTTCTCCTTTCCATGCTACCCGGTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR CCA 90 bp | CTGAACCGGGTAGCATGGAAAGGAGAAACGATGTTACTGAGATCTCTTATCACTACGGATCCCGGAGCCTaGTTGCTGTCTACGGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: LNRVAWKGETMLLRSLITTDPGA*LLSTAA Trigger: GGCCGCCGTAGACAGCAACCAGGCTCCGGGATCCGT...AGTGATAAGAGATCTCAGTAACATCGTTTCTCCTTTCCATGCTACCCGGTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR GCA 90 bp | GAGAGACAAAGTCATAACTGCTGGTGTCACCAGATTCTGAAGTCCCCAACTCTTGACACCAGGTTCGGCTaGAACTGGGTGGTCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ERQSHNCWCHQILKSPTLDTRFG*NWVVWA Trigger: TGCCCAGACCACCCAGTTGCAGCCGAACCTGGTGTC...AAGAGTTGGGGACTTCAGAATCTGGTGACACCAGCAGTTATGACTTTGTCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR GCA 90 bp | GAGAGACAAAGTCATAACTGCTGGTGTCACCAGATTCTGAAGTCCCCAACTCTTATCCCGGAGCCTGGTTaGTGTCTACGGCGGCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ERQSHNCWCHQILKSPTLIPEPG*CLRRPE Trigger: TTCAGGCCGCCGTAGACAGCAACCAGGCTCCGGGAT...AAGAGTTGGGGACTTCAGAATCTGGTGACACCAGCAGTTATGACTTTGTCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR GCA 90 bp | CCATCAGAATCACAGACTGCACCTGAACCGGGTAGCATGGAAAGGAGAAACGATGCTGCAAACTCGACTTaGACTGTGAGGTCGATGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSESQTAPEPGSMERRNDAANST*TVRSMG Trigger: GCCCATCGACCTCACAGTGCAAGTCGAGTTTGCAGC...ATCGTTTCTCCTTTCCATGCTACCCGGTTCAGGTGCAGTCTGTGATTCTGATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR CCA 90 bp | CTGAACCGGGTAGCATGGAAAGGAGAAACGATGTTACTGAGATCTCTTATCACTACGCTGCAGAGACGGTaGCCGGTGGTGGGTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LNRVAWKGETMLLRSLITTLQRR*PVVGWK Trigger: CTTCCAACCCACCACCGGCCACCGTCTCTGCAGCGT...AGTGATAAGAGATCTCAGTAACATCGTTTCTCCTTTCCATGCTACCCGGTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR CCA 90 bp | CTGAACCGGGTAGCATGGAAAGGAGAAACGATGTTACTGAGATCTCTTATCACTTGCAACTGGGTGGTCTaGGCAGTGGAGGAGGACGGA | + |
|
Preference number: 4 (lower is better) Translates to: LNRVAWKGETMLLRSLITCNWVV*AVEEDG Trigger: TCCGTCCTCCTCCACTGCCCAGACCACCCAGTTGCA...AGTGATAAGAGATCTCAGTAACATCGTTTCTCCTTTCCATGCTACCCGGTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR CCA 90 bp | CTGAACCGGGTAGCATGGAAAGGAGAAACGATGTTACTGAGATCTCTTATCACTAGGTTCGGCTGCAACTaGGTGGTCTGGGCAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LNRVAWKGETMLLRSLITRFGCN*VVWAVE Trigger: CTCCACTGCCCAGACCACCCAGTTGCAGCCGAACCT...AGTGATAAGAGATCTCAGTAACATCGTTTCTCCTTTCCATGCTACCCGGTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR TCA 90 bp | GAGAGACAAAGTCATAACTGCTGGTGTCACCAGATTCTGAAGTCCCCAACTCTTCTACTTTGCGCTCATTaGCGCCACGCAGCGGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ERQSHNCWCHQILKSPTLLLCAH*RHAAGK Trigger: TTTTCCCGCTGCGTGGCGTCAATGAGCGCAAAGTAG...AAGAGTTGGGGACTTCAGAATCTGGTGACACCAGCAGTTATGACTTTGTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR CCA 90 bp | GAGAGACAAAGTCATAACTGCTGGTGTCACCAGATTCTGAAGTCCCCAACTCTTGACAAGGAGTACGAGTaGTCAGAGCCAGTGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ERQSHNCWCHQILKSPTLDKEYE*SEPVSG Trigger: CCCTGACACTGGCTCTGACCACTCGTACTCCTTGTC...AAGAGTTGGGGACTTCAGAATCTGGTGACACCAGCAGTTATGACTTTGTCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR TCA 90 bp | GAGAGACAAAGTCATAACTGCTGGTGTCACCAGATTCTGAAGTCCCCAACTCTTACTCGACTTGCACTGTaGGGTCGATGGGCTTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: ERQSHNCWCHQILKSPTLTRLAL*GRWASH Trigger: ATGTGAAGCCCATCGACCTCACAGTGCAAGTCGAGT...AAGAGTTGGGGACTTCAGAATCTGGTGACACCAGCAGTTATGACTTTGTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR GCA 90 bp | GAGAGACAAAGTCATAACTGCTGGTGTCACCAGATTCTGAAGTCCCCAACTCTTCGTAAGAAGCACAGCTaGAGAGGCAGACACCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ERQSHNCWCHQILKSPTLRKKHS*RGRHQV Trigger: AACCTGGTGTCTGCCTCTGCAGCTGTGCTTCTTACG...AAGAGTTGGGGACTTCAGAATCTGGTGACACCAGCAGTTATGACTTTGTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR CCA 90 bp | GAGAGACAAAGTCATAACTGCTGGTGTCACCAGATTCTGAAGTCCCCAACTCTTGCAACTCAGCGTCCTTaGGAAACGTGTAGAAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ERQSHNCWCHQILKSPTLATQRP*ETCRSA Trigger: TGCACTTCTACACGTTTCCCAAGGACGCTGAGTTGC...AAGAGTTGGGGACTTCAGAATCTGGTGACACCAGCAGTTATGACTTTGTCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS GCA 90 bp | CGCCACGCAGCGGGAAAATGGTGGGAACGCGCACCGTGTAGGTCTTaGGGCCGCCCTGAAAGTGGACGCTGCAGAGACGGTGGCCGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RHAAGKWWERAPCRS*GRPESGRCRDGGRW Trigger: CCACCGGCCACCGTCTCTGCAGCGTCCACTTTCAGGGCGGCCGCAAGACCTACACGGTGCGCGTTCCCACCATTTTCCCGCTGCGTGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS TCA 90 bp | GGGCTGCCGCAGCTCCCGCAGGTCTCCGAGCTACTTTGCGCTCATTaGCGCCACGCAGCGGGAAAATGGTGGGAACGCGCACCGTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLPQLPQVSELLCAH*RHAAGKWWERAPCR Trigger: CCTACACGGTGCGCGTTCCCACCATTTTCCCGCTGCGTGGCGTCAATGAGCGCAAAGTAGCTCGGAGACCTGCGGGAGCTGCGGCAGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS GCA 90 bp | GAACGCGCACCGTGTAGGTCTTGCGGCCGCCCTGAAAGTGGACGCTaGAGAGACGGTGGCCGGTGGTGGGTTGGAAGGTGGAGAAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: ERAPCRSCGRPESGR*RDGGRWWVGRWRST Trigger: GGTGCTTCTCCACCTTCCAACCCACCACCGGCCACCGTCTCTGCAGCGTCCACTTTCAGGGCGGCCGCAAGACCTACACGGTGCGCGTTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS GCA 90 bp | GCGGCGGCAGCGGCGGCTGCCCCTTCAGCAGCTGCAAACTCGACTTaGACTGTGAGGTCGATGGGCTTCACATCATCTCCCGAGGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: AAAAAAAPSAAANST*TVRSMGFTSSPEGV Trigger: GACTCCCTCGGGAGATGATGTGAAGCCCATCGACCTCACAGTGCAAGTCGAGTTTGCAGCTGCTGAAGGGGCAGCCGCCGCTGCCGCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS CCA 90 bp | ACAGCTGCAGAGGCAGACACCAGGTTCGGCTGCAACTGGGTGGTCTaGGCAGTGGAGGAGGACGGAGACGGCTGCTGCTGTTGCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TAAEADTRFGCNWVV*AVEEDGDGCCCCSC Trigger: GCAGCTGCAACAGCAGCAGCCGTCTCCGTCCTCCTCCACTGCCCAGACCACCCAGTTGCAGCCGAACCTGGTGTCTGCCTCTGCAGCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS GCA 90 bp | CTGCTGCTGCTGTTGTTGTTGCTGCTGCTGCTGCCTACGGCGGGCTaGCGCAGCTCCCGCAGGTCTCCGAGCTACTTTGCGCTCATTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLLLLLLLLLLPTAG*RSSRRSPSYFALID Trigger: GTCAATGAGCGCAAAGTAGCTCGGAGACCTGCGGGAGCTGCGGCAGCCCGCCGTAGGCAGCAGCAGCAGCAACAACAACAGCAGCAGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS CCA 90 bp | GAAGCACAGCTGCAGAGGCAGACACCAGGTTCGGCTGCAACTGGGTaGTCTGGGCAGTGGAGGAGGACGGAGACGGCTGCTGCTGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: EAQLQRQTPGSAATG*SGQWRRTETAAAVA Trigger: TGCAACAGCAGCAGCCGTCTCCGTCCTCCTCCACTGCCCAGACCACCCAGTTGCAGCCGAACCTGGTGTCTGCCTCTGCAGCTGTGCTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS CCA 90 bp | CGCAGGAGCTCCTCCTCCGTGGTACCCGAGGACAAGGAGTACGAGTaGTCAGAGCCAGTGTCAGGGAAGCCCTCTTCCCCTACCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: RRSSSSVVPEDKEYE*SEPVSGKPSSPTTT Trigger: GGTGGTGGTAGGGGAAGAGGGCTTCCCTGACACTGGCTCTGACCACTCGTACTCCTTGTCCTCGGGTACCACGGAGGAGGAGCTCCTGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS GCA 90 bp | TGGGTGGTCTGGGCAGTGGAGGAGGACGGAGACGGCTGCTGCTGTTaGAGCTGCTGCTGTTGCTGCTGCTGCTGTTGTTGTTGCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WVVWAVEEDGDGCCC*SCCCCCCCCCCCCC Trigger: GCAGCAGCAACAACAACAGCAGCAGCAGCAACAGCAGCAGCTGCAACAGCAGCAGCCGTCTCCGTCCTCCTCCACTGCCCAGACCACCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS GCA 90 bp | AGCCTGGTTGCTGTCTACGGCGGCCTGAAGCGTAAGAAGCACAGCTaGAGAGGCAGACACCAGGTTCGGCTGCAACTGGGTGGTCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLVAVYGGLKRKKHS*RGRHQVRLQLGGLG Trigger: GCCCAGACCACCCAGTTGCAGCCGAACCTGGTGTCTGCCTCTGCAGCTGTGCTTCTTACGCTTCAGGCCGCCGTAGACAGCAACCAGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS GCA 90 bp | TGCAACTGGGTGGTCTGGGCAGTGGAGGAGGACGGAGACGGCTGCTaGTGTTGCAGCTGCTGCTGTTGCTGCTGCTGCTGTTGTTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CNWVVWAVEEDGDGC*CCSCCCCCCCCCCC Trigger: GCAACAACAACAGCAGCAGCAGCAACAGCAGCAGCTGCAACAGCAGCAGCCGTCTCCGTCCTCCTCCACTGCCCAGACCACCCAGTTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS CCA 90 bp | AGATGTCCCGCTGCTCGTTCAGCTTGCGCAGGAGCTCCTCCTCCGTaGTACCCGAGGACAAGGAGTACGAGTGGTCAGAGCCAGTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RCPAARSACAGAPPP*YPRTRSTSGQSQCQ Trigger: CTGACACTGGCTCTGACCACTCGTACTCCTTGTCCTCGGGTACCACGGAGGAGGAGCTCCTGCGCAAGCTGAACGAGCAGCGGGACATCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS GCA 90 bp | TCTTCACTTCCATCAGGGCCAAGATGTCCCGCTGCTCGTTCAGCTTaGGCAGGAGCTCCTCCTCCGTGGTACCCGAGGACAAGGAGTACG | + |
|
Preference number: 5 (lower is better) Translates to: SSLPSGPRCPAARSA*AGAPPPWYPRTRST Trigger: CGTACTCCTTGTCCTCGGGTACCACGGAGGAGGAGCTCCTGCGCAAGCTGAACGAGCAGCGGGACATCTTGGCCCTGATGGAAGTGAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR CAA 90 bp | CACAGATCAGCTAGTCCCCATCAGAATCACAGACTGCACCTGAACCGGGTAGCAGTGGCCGGTGGTGGGTaGGAAGGTGGAGAAGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: HRSASPHQNHRLHLNRVAVAGGG*EGGEAP Trigger: GGGTGCTTCTCCACCTTCCAACCCACCACCGGCCAC...TGCTACCCGGTTCAGGTGCAGTCTGTGATTCTGATGGGGACTAGCTGATCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR CAA 90 bp | CCATCAGAATCACAGACTGCACCTGAACCGGGTAGCATGGAAAGGAGAAACGATGCACGGGACACGTTCTaGAGCCAGAGGCGCCGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: PSESQTAPEPGSMERRNDARDTF*SQRRRN Trigger: GTTGCGGCGCCTCTGGCTCAAGAACGTGTCCCGTGC...ATCGTTTCTCCTTTCCATGCTACCCGGTTCAGGTGCAGTCTGTGATTCTGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR CAA 90 bp | CACAGATCAGCTAGTCCCCATCAGAATCACAGACTGCACCTGAACCGGGTAGCAAGTTCTTCACGGAGCTaGGCCTCGGTGAGACGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HRSASPHQNHRLHLNRVASSSRS*ASVRRR Trigger: TCTGCGTCTCACCGAGGCCAAGCTCCGTGAAGAACT...TGCTACCCGGTTCAGGTGCAGTCTGTGATTCTGATGGGGACTAGCTGATCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR CAA 90 bp | CTGAACCGGGTAGCATGGAAAGGAGAAACGATGTTACTGAGATCTCTTATCACTGGTCTCCGAGCTACTTaGCGCTCATTGACGCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: LNRVAWKGETMLLRSLITGLRAT*RSLTPR Trigger: GCGTGGCGTCAATGAGCGCAAAGTAGCTCGGAGACC...AGTGATAAGAGATCTCAGTAACATCGTTTCTCCTTTCCATGCTACCCGGTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR CAA 90 bp | CTGAACCGGGTAGCATGGAAAGGAGAAACGATGTTACTGAGATCTCTTATCACTGCTACTTTGCGCTCATaGACGCCACGCAGCGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LNRVAWKGETMLLRSLITATLRS*TPRSGK Trigger: TTTCCCGCTGCGTGGCGTCAATGAGCGCAAAGTAGC...AGTGATAAGAGATCTCAGTAACATCGTTTCTCCTTTCCATGCTACCCGGTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS-3UTR CAA 90 bp | CTGAACCGGGTAGCATGGAAAGGAGAAACGATGTTACTGAGATCTCTTATCACTAGCTGCAAACTCGACTaGCACTGTGAGGTCGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: LNRVAWKGETMLLRSLITSCKLD*HCEVDG Trigger: CCCATCGACCTCACAGTGCAAGTCGAGTTTGCAGCT...AGTGATAAGAGATCTCAGTAACATCGTTTCTCCTTTCCATGCTACCCGGTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS CAA 90 bp | TGCCTACGGCGGGCTGCCGCAGCTCCCGCAGGTCTCCGAGCTACTTaGCGCTCATTGACGCCACGCAGCGGGAAAATGGTGGGAACGCGC | + |
|
Preference number: 6 (lower is better) Translates to: CLRRAAAAPAGLRAT*RSLTPRSGKMVGTR Trigger: GCGCGTTCCCACCATTTTCCCGCTGCGTGGCGTCAATGAGCGCAAAGTAGCTCGGAGACCTGCGGGAGCTGCGGCAGCCCGCCGTAGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS GCA 72 bp | CCGTGTAGGTCTTGCGGCCGCCCTGAAAGTGGACGCTaGAGAGACGGTGGCCGGTGGTGGGTTGGAAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PCRSCGRPESGR*RDGGRWWVGRW Trigger: CCACCTTCCAACCCACCACCGGCCACCGTCTCTGCAGCGTCCACTTTCAGGGCGGCCGCAAGACCTACACGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS CAA 90 bp | GCCGCCCTGAAAGTGGACGCTGCAGAGACGGTGGCCGGTGGTGGGTaGGAAGGTGGAGAAGCACCCACTGACGCCAGCACGGGACACGTT | + |
|
Preference number: 6 (lower is better) Translates to: AALKVDAAETVAGGG*EGGEAPTDASTGHV Trigger: AACGTGTCCCGTGCTGGCGTCAGTGGGTGCTTCTCCACCTTCCAACCCACCACCGGCCACCGTCTCTGCAGCGTCCACTTTCAGGGCGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS GCA 72 bp | TGTTGCTGCTGCTGCTGTTGTTGTTGCTGCTGCTGCTaGCTACGGCGGGCTGCCGCAGCTCCCGCAGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: CCCCCCCCCCCC*LRRAAAAPAGL Trigger: GAGACCTGCGGGAGCTGCGGCAGCCCGCCGTAGGCAGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAACA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS GCA 72 bp | TGCTGTTGCTGCTGCTGCTGTTGTTGTTGCTGCTGCTaGTGCCTACGGCGGGCTGCCGCAGCTCCCGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: CCCCCCCCCCCC*CLRRAAAAPAG Trigger: ACCTGCGGGAGCTGCGGCAGCCCGCCGTAGGCAGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAACAGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS GCA 72 bp | TGGGTGGTCTGGGCAGTGGAGGAGGACGGAGACGGCTaGTGCTGTTGCAGCTGCTGCTGTTGCTGCTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: WVVWAVEEDGDG*CCCSCCCCCCC Trigger: GCAGCAGCAGCAACAGCAGCAGCTGCAACAGCAGCAGCCGTCTCCGTCCTCCTCCACTGCCCAGACCACCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS CCA 72 bp | AAGTGGACGCTGCAGAGACGGTGGCCGGTGGTGGGTTaGAAGGTGGAGAAGCACCCACTGACGCCAGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: KWTLQRRWPVVG*KVEKHPLTPAR Trigger: CCGTGCTGGCGTCAGTGGGTGCTTCTCCACCTTCCAACCCACCACCGGCCACCGTCTCTGCAGCGTCCACTT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS CCA 72 bp | GAGGCAGACACCAGGTTCGGCTGCAACTGGGTGGTCTaGGCAGTGGAGGAGGACGGAGACGGCTGCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: EADTRFGCNWVV*AVEEDGDGCCC Trigger: ACAGCAGCAGCCGTCTCCGTCCTCCTCCACTGCCCAGACCACCCAGTTGCAGCCGAACCTGGTGTCTGCCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS CCA 72 bp | CTGCAGAGGCAGACACCAGGTTCGGCTGCAACTGGGTaGTCTGGGCAGTGGAGGAGGACGGAGACGGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LQRQTPGSAATG*SGQWRRTETAA Trigger: AGCAGCCGTCTCCGTCCTCCTCCACTGCCCAGACCACCCAGTTGCAGCCGAACCTGGTGTCTGCCTCTGCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS CAA 72 bp | CGGGCTGCCGCAGCTCCCGCAGGTCTCCGAGCTACTTaGCGCTCATTGACGCCACGCAGCGGGAAAATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RAAAAPAGLRAT*RSLTPRSGKMV Trigger: CACCATTTTCCCGCTGCGTGGCGTCAATGAGCGCAAAGTAGCTCGGAGACCTGCGGGAGCTGCGGCAGCCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS CAA 90 bp | GGCGGCGGCAGCGGCGGCTGCCCCTTCAGCAGCTGCAAACTCGACTaGCACTGTGAGGTCGATGGGCTTCACATCATCTCCCGAGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GGGSGGCPFSSCKLD*HCEVDGLHIISRGS Trigger: ACTCCCTCGGGAGATGATGTGAAGCCCATCGACCTCACAGTGCAAGTCGAGTTTGCAGCTGCTGAAGGGGCAGCCGCCGCTGCCGCCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS GCA 72 bp | GCGGGAAAATGGTGGGAACGCGCACCGTGTAGGTCTTaGGGCCGCCCTGAAAGTGGACGCTGCAGAGACGGT | + |
|
Preference number: 6 (lower is better) Translates to: AGKWWERAPCRS*GRPESGRCRDG Trigger: ACCGTCTCTGCAGCGTCCACTTTCAGGGCGGCCGCAAGACCTACACGGTGCGCGTTCCCACCATTTTCCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS GCA 72 bp | GTGGTCTGGGCAGTGGAGGAGGACGGAGACGGCTGCTaGTGTTGCAGCTGCTGCTGTTGCTGCTGCTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VVWAVEEDGDGC*CCSCCCCCCCC Trigger: ACAGCAGCAGCAGCAACAGCAGCAGCTGCAACAGCAGCAGCCGTCTCCGTCCTCCTCCACTGCCCAGACCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
||
| CDS CCA 72 bp | GGTCGATGGGCTTCACATCATCTCCCGAGGGAGTCGTaGACACGGGAACCACGGATCCCGGAGCCTGGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GRWASHHLPRES*TREPRIPEPGC Trigger: GCAACCAGGCTCCGGGATCCGTGGTTCCCGTGTCCACGACTCCCTCGGGAGATGATGTGAAGCCCATCGACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
||
| CDS CAA 72 bp | GAGAAGCACCCACTGACGCCAGCACGGGACACGTTCTaGAGCCAGAGGCGCCGCAACTCAGCGTCCTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: EKHPLTPARDTF*SQRRRNSASLG Trigger: TCCCAAGGACGCTGAGTTGCGGCGCCTCTGGCTCAAGAACGTGTCCCGTGCTGGCGTCAGTGGGTGCTTCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
||
| CDS CAA 72 bp | AAAGTGGACGCTGCAGAGACGGTGGCCGGTGGTGGGTaGGAAGGTGGAGAAGCACCCACTGACGCCAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: KVDAAETVAGGG*EGGEAPTDAST Trigger: CGTGCTGGCGTCAGTGGGTGCTTCTCCACCTTCCAACCCACCACCGGCCACCGTCTCTGCAGCGTCCACTTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
||
| CDS CAA 72 bp | GCAGCTCCCGCAGGTCTCCGAGCTACTTTGCGCTCATaGACGCCACGCAGCGGGAAAATGGTGGGAACGCGC | + |
|
Preference number: 6 (lower is better) Translates to: AAPAGLRATLRS*TPRSGKMVGTR Trigger: GCGCGTTCCCACCATTTTCCCGCTGCGTGGCGTCAATGAGCGCAAAGTAGCTCGGAGACCTGCGGGAGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
||
| CDS CAA 72 bp | TCCATCAGGGCCAAGATGTCCCGCTGCTCGTTCAGCTaGCGCAGGAGCTCCTCCTCCGTGGTACCCGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SIRAKMSRCSFS*RRSSSSVVPED Trigger: GTCCTCGGGTACCACGGAGGAGGAGCTCCTGCGCAAGCTGAACGAGCAGCGGGACATCTTGGCCCTGATGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS CAA 90 bp | CTGGGTGGTCTGGGCAGTGGAGGAGGACGGAGACGGCTGCTGCTGTaGCAGCTGCTGCTGTTGCTGCTGCTGCTGTTGTTGTTGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LGGLGSGGGRRRLLL*QLLLLLLLLLLLLL Trigger: CAGCAGCAACAACAACAGCAGCAGCAGCAACAGCAGCAGCTGCAACAGCAGCAGCCGTCTCCGTCCTCCTCCACTGCCCAGACCACCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS TCA 72 bp | CAGCTCCCGCAGGTCTCCGAGCTACTTTGCGCTCATTaGCGCCACGCAGCGGGAAAATGGTGGGAACGCGCA | + |
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Preference number: 6 (lower is better) Translates to: QLPQVSELLCAH*RHAAGKWWERA Trigger: TGCGCGTTCCCACCATTTTCCCGCTGCGTGGCGTCAATGAGCGCAAAGTAGCTCGGAGACCTGCGGGAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS CCA 72 bp | GCTGCTCGTTCAGCTTGCGCAGGAGCTCCTCCTCCGTaGTACCCGAGGACAAGGAGTACGAGTGGTCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: AARSACAGAPPP*YPRTRSTSGQS Trigger: GCTCTGACCACTCGTACTCCTTGTCCTCGGGTACCACGGAGGAGGAGCTCCTGCGCAAGCTGAACGAGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS CCA 72 bp | TCCTCCTCCGTGGTACCCGAGGACAAGGAGTACGAGTaGTCAGAGCCAGTGTCAGGGAAGCCCTCTTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: SSSVVPEDKEYE*SEPVSGKPSSP Trigger: AGGGGAAGAGGGCTTCCCTGACACTGGCTCTGACCACTCGTACTCCTTGTCCTCGGGTACCACGGAGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS CAA 72 bp | AGCGGCGGCTGCCCCTTCAGCAGCTGCAAACTCGACTaGCACTGTGAGGTCGATGGGCTTCACATCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: SGGCPFSSCKLD*HCEVDGLHIIS Trigger: GGAGATGATGTGAAGCCCATCGACCTCACAGTGCAAGTCGAGTTTGCAGCTGCTGAAGGGGCAGCCGCCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS CAA 90 bp | ATCTTCACTTCCATCAGGGCCAAGATGTCCCGCTGCTCGTTCAGCTaGCGCAGGAGCTCCTCCTCCGTGGTACCCGAGGACAAGGAGTAC | + |
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Preference number: 6 (lower is better) Translates to: IFTSIRAKMSRCSFS*RRSSSSVVPEDKEY Trigger: GTACTCCTTGTCCTCGGGTACCACGGAGGAGGAGCTCCTGCGCAAGCTGAACGAGCAGCGGGACATCTTGGCCCTGATGGAAGTGAAGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS CAA 90 bp | GCCATGGCAAGCAGACGATCCTTCTCTCGAAGTTCTTCACGGAGCTaGGCCTCGGTGAGACGCAGATGGCGGATGCTACCCTTCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: AMASRRSFSRSSSRS*ASVRRRWRMLPFIS Trigger: GGAGATGAAGGGTAGCATCCGCCATCTGCGTCTCACCGAGGCCAAGCTCCGTGAAGAACTTCGAGAGAAGGATCGTCTGCTTGCCATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS CAA 72 bp | AGCAGACGATCCTTCTCTCGAAGTTCTTCACGGAGCTaGGCCTCGGTGAGACGCAGATGGCGGATGCTACCC | + |
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Preference number: 6 (lower is better) Translates to: SRRSFSRSSSRS*ASVRRRWRMLP Trigger: GGGTAGCATCCGCCATCTGCGTCTCACCGAGGCCAAGCTCCGTGAAGAACTTCGAGAGAAGGATCGTCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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| CDS TCA 72 bp | GGGAAACGTGTAGAAGTGCAGCGCCTTGTCCCGGTGTaGATTGTTGTAGCAGCCCGGAACGCAGCACGTAAA | + |
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Preference number: 6 (lower is better) Translates to: GKRVEVQRLVPV*IVVAARNAARK Trigger: TTTACGTGCTGCGTTCCGGGCTGCTACAACAATTCACACCGGGACAAGGCGCTGCACTTCTACACGTTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040445.9 |
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