Pregenerated sensors for TGTP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078922Ensembl transcript IDs: ENSMUST00000068063.4, ENSMUST00000146439.8
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AAGGCCTGGCAGAGCCATGTTTGCCATCATGGGCTGTCTAGCTTCCCTTCAGAGGAAGCAATGTGGAGGTaGTTACATGCCTTAGTGACA | + |
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Preference number: 2 (lower is better) Translates to: KAWQSHVCHHGLSSFPSEEAMWR*LHALVT Trigger: TGTCACTAAGGCATGTAAGCACCTCCACATTGCTTC...CTCTGAAGGGAAGCTAGACAGCCCATGATGGCAAACATGGCTCTGCCAGGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| 3UTR-3UTR GCA 90 bp | GTGGGCACATCTCTCCACAGGCTCACATTCATCTTCAGGCCACAATGTAGGTGTGTGGAGGTGCTTACATaGCTTAGTGACAAAGCACCA | + |
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Preference number: 2 (lower is better) Translates to: VGTSLHRLTFIFRPQCRCVEVLT*LSDKAP Trigger: TGGTGCTTTGTCACTAAGGCATGTAAGCACCTCCAC...ACACCTACATTGTGGCCTGAAGATGAATGTGAGCCTGTGGAGAGATGTGCCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| 3UTR-3UTR GCA 90 bp | CAGCTGCTGACAACTTCTTTCTGCAAGATGTCAGCAATAGCTTTCCTCTGTGAAAGGTGTTACAAGCTCTaGCACAGGACAGAGAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: QLLTTSFCKMSAIAFLCERCYKL*HRTERQ Trigger: CTGCCTCTCTGTCCTGTGGCAGAGCTTGTAACACCT...TTCACAGAGGAAAGCTATTGCTGACATCTTGCAGAAAGAAGTTGTCAGCAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| 3UTR-3UTR GCA 90 bp | TTGACAACATGTAGAATCTCCTGGAACACCCAGTTCTGGGTCAAAACGTGTTTGCTTTGCTGTCATATTTaGACGATGTTGAAGACACTT | + |
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Preference number: 2 (lower is better) Translates to: LTTCRISWNTQFWVKTCLLCCHI*TMLKTL Trigger: AAGTGTCTTCAACATCGTGCAAATATGACAGCAAAG...CAAACACGTTTTGACCCAGAACTGGGTGTTCCAGGAGATTCTACATGTTGTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| 3UTR GCA 72 bp | ATGGAAGAGAAGGGCAAGGCCTGGCAGAGCCATGTTTaGCATCATGGGCTGTCTAGCTTCCCTTCAGAGTCC | + |
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Preference number: 3 (lower is better) Translates to: MEEKGKAWQSHV*HHGLSSFPSES Trigger: GGACTCTGAAGGGAAGCTAGACAGCCCATGATGGCAAACATGGCTCTGCCAGGCCTTGCCCTTCTCTTCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| 3UTR-3UTR CAA 90 bp | AGGAGTGTGGGTGGGCACATCTCTCCACAGGCTCACATTCATCTTCAGGCCACAGTTCTCTCACGTGAGTaGATGGTTGAACTGACTGGA | + |
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Preference number: 3 (lower is better) Translates to: RSVGGHISPQAHIHLQATVLSRE*MVELTG Trigger: TCCAGTCAGTTCAACCATCAACTCACGTGAGAGAAC...TGTGGCCTGAAGATGAATGTGAGCCTGTGGAGAGATGTGCCCACCCACACTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| 3UTR GCA 72 bp | GCCATCATGGGCTGTCTAGCTTCCCTTCAGAGTCCATaGCAGCTGCTGACAACTTCTTTCTGCAAGATGTCA | + |
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Preference number: 3 (lower is better) Translates to: AIMGCLASLQSP*QLLTTSFCKMS Trigger: TGACATCTTGCAGAAAGAAGTTGTCAGCAGCTGGCATGGACTCTGAAGGGAAGCTAGACAGCCCATGATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| 3UTR-3UTR CAA 90 bp | TGCCATCATGGGCTGTCTAGCTTCCCTTCAGAGTCCATGCCAGCTGCTGACAACCATATTTGCACGATGTaGAAGACACTTCTTTTCTAC | + |
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Preference number: 3 (lower is better) Translates to: CHHGLSSFPSESMPAADNHICTM*KTLLFY Trigger: GTAGAAAAGAAGTGTCTTCAACATCGTGCAAATATG...GTTGTCAGCAGCTGGCATGGACTCTGAAGGGAAGCTAGACAGCCCATGATGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| 3UTR-3UTR CAA 90 bp | ATCTTCAGGCCACAATGTAGGTGTTACAAGCTCTGCCACAGGACAGAGAGGCAGACTTTGCTGTCATATTaGCACGATGTTGAAGACACT | + |
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Preference number: 3 (lower is better) Translates to: IFRPQCRCYKLCHRTERQTLLSY*HDVEDT Trigger: AGTGTCTTCAACATCGTGCAAATATGACAGCAAAGT...CTGCCTCTCTGTCCTGTGGCAGAGCTTGTAACACCTACATTGTGGCCTGAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| 3UTR CCA 72 bp | CTTACATGCCTTAGTGACAAAGCACCAATACTACCATaGTCAGCAAAGAGCCTGGGTTTGGTTAGCACATGG | + |
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Preference number: 3 (lower is better) Translates to: LTCLSDKAPILP*SAKSLGLVSTW Trigger: CCATGTGCTAACCAAACCCAGGCTCTTTGCTGACCATGGTAGTATTGGTGCTTTGTCACTAAGGCATGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| 3UTR GCA 72 bp | CTTCAGAGTCCATGCCAGCTGCTGACAACTTCTTTCTaGAAGATGTCAGCAATAGCTTTCCTCTGTGAAGTA | + |
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Preference number: 3 (lower is better) Translates to: LQSPCQLLTTSF*KMSAIAFLCEV Trigger: TACTTCACAGAGGAAAGCTATTGCTGACATCTTGCAGAAAGAAGTTGTCAGCAGCTGGCATGGACTCTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| 3UTR CCA 72 bp | TTCTATACTGAGTCAGGGGTTTATATTTTAGGAGTGTaGGTGGGCACATCTCTCCACAGGCTCACATTCATC | + |
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Preference number: 3 (lower is better) Translates to: FYTESGVYILGV*VGTSLHRLTFI Trigger: GATGAATGTGAGCCTGTGGAGAGATGTGCCCACCCACACTCCTAAAATATAAACCCCTGACTCAGTATAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| 3UTR CCA 72 bp | ACAAAGCACCAATACTACCATGGTCAGCAAAGAGCCTaGGTTTGGTTAGCACATGGGGTTATTAATGTTAGT | + |
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Preference number: 3 (lower is better) Translates to: TKHQYYHGQQRA*VWLAHGVINVS Trigger: ACTAACATTAATAACCCCATGTGCTAACCAAACCCAGGCTCTTTGCTGACCATGGTAGTATTGGTGCTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS-3UTR TCA 90 bp | ATCTTCAGGCCACAATGTAGGTGTTACAAGCTCTGCCACAGGACAGAGAGGCAGCCATGCGATAGTAAGTaGCTGCAGCGACTGGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: IFRPQCRCYKLCHRTERQPCDSK*LQRLAH Trigger: GTGGGCCAGTCGCTGCAGTCACTTACTATCGCATGG...CTGCCTCTCTGTCCTGTGGCAGAGCTTGTAACACCTACATTGTGGCCTGAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS-3UTR CCA 90 bp | AGGAGTGTGGGTGGGCACATCTCTCCACAGGCTCACATTCATCTTCAGGCCACACACCAAGTGGAATGGTaGCTAATGCTCCAGCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: RSVGGHISPQAHIHLQATHQVEW*LMLQPS Trigger: TGAAGGCTGGAGCATTAGCCACCATTCCACTTGGTG...TGTGGCCTGAAGATGAATGTGAGCCTGTGGAGAGATGTGCCCACCCACACTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS-3UTR GCA 90 bp | GAGAAGGGCAAGGCCTGGCAGAGCCATGTTTGCCATCATGGGCTGTCTAGCTTCGCCTCAGTAAGACTTTaGAAAGACAGTGAGAAGACG | + |
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Preference number: 4 (lower is better) Translates to: EKGKAWQSHVCHHGLSSFASVRL*KDSEKT Trigger: CGTCTTCTCACTGTCTTTGCAAAGTCTTACTGAGGC...GAAGCTAGACAGCCCATGATGGCAAACATGGCTCTGCCAGGCCTTGCCCTTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS-3UTR CCA 90 bp | AGGAGTGTGGGTGGGCACATCTCTCCACAGGCTCACATTCATCTTCAGGCCACAATGGAGTTCTCTTCATaGTTGTCTCTATTGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: RSVGGHISPQAHIHLQATMEFSS*LSLLPQ Trigger: CTGGGGCAATAGAGACAACCATGAAGAGAACTCCAT...TGTGGCCTGAAGATGAATGTGAGCCTGTGGAGAGATGTGCCCACCCACACTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS-3UTR CCA 90 bp | ATGGTGATCTTCTGGATCAGGAGAAGGGAAAGCATGAATCCTCTGGCCTGCCACCACGTTGGGAAGCTTTaGGTGTGGGTATGGAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: MVIFWIRRRESMNPLACHHVGKL*VWVWSS Trigger: AGAACTCCATACCCACACCCAAAGCTTCCCAACGTG...GTGGCAGGCCAGAGGATTCATGCTTTCCCTTCTCCTGATCCAGAAGATCACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS-3UTR CCA 90 bp | AAGGCCTGGCAGAGCCATGTTTGCCATCATGGGCTGTCTAGCTTCCCTTCAGAGATGCTCCAGCCTTCATaGCTTCTAGGAAGACTTTTT | + |
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Preference number: 4 (lower is better) Translates to: KAWQSHVCHHGLSSFPSEMLQPS*LLGRLF Trigger: AAAAAGTCTTCCTAGAAGCCATGAAGGCTGGAGCAT...CTCTGAAGGGAAGCTAGACAGCCCATGATGGCAAACATGGCTCTGCCAGGCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| 3UTR CAA 72 bp | ACAGAGAGGCAGGTTCACTCTGTTCTCTCACGTGAGTaGATGGTTGAACTGACTGGAGAAAGGTGTCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: TERQVHSVLSRE*MVELTGERCQW Trigger: CCACTGACACCTTTCTCCAGTCAGTTCAACCATCAACTCACGTGAGAGAACAGAGTGAACCTGCCTCTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS-3UTR TCA 90 bp | AAGGCCTGGCAGAGCCATGTTTGCCATCATGGGCTGTCTAGCTTCCCTTCAGAGTGTCTATCTTGGTTCTaGCAAAGTAGAAATTCATCC | + |
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Preference number: 4 (lower is better) Translates to: KAWQSHVCHHGLSSFPSECLSWF*QSRNSS Trigger: GGATGAATTTCTACTTTGTCAGAACCAAGATAGACA...CTCTGAAGGGAAGCTAGACAGCCCATGATGGCAAACATGGCTCTGCCAGGCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS-3UTR CCA 90 bp | ATGGTGATCTTCTGGATCAGGAGAAGGGAAAGCATGAATCCTCTGGCCTGCCACTGTCAGATAGTTTTGTaGTGTGAAGTTAGTGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: MVIFWIRRRESMNPLACHCQIVL*CEVSGP Trigger: GGGACCACTAACTTCACACCACAAAACTATCTGACA...GTGGCAGGCCAGAGGATTCATGCTTTCCCTTCTCCTGATCCAGAAGATCACCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS-3UTR CCA 90 bp | ATCTTCAGGCCACAATGTAGGTGTTACAAGCTCTGCCACAGGACAGAGAGGCAGTGTTCTGCAAACAAATaGGGAAATCGAAGGTGTACC | + |
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Preference number: 4 (lower is better) Translates to: IFRPQCRCYKLCHRTERQCSANK*GNRRCT Trigger: GGTACACCTTCGATTTCCCCATTTGTTTGCAGAACA...CTGCCTCTCTGTCCTGTGGCAGAGCTTGTAACACCTACATTGTGGCCTGAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS-3UTR CCA 90 bp | ATGGTGATCTTCTGGATCAGGAGAAGGGAAAGCATGAATCCTCTGGCCTGCCACGAGCTATGGCATCATTaGCTGCAGTATCAAGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: MVIFWIRRRESMNPLACHELWHH*LQYQER Trigger: TCTTTCTTGATACTGCAGCCAATGATGCCATAGCTC...GTGGCAGGCCAGAGGATTCATGCTTTCCCTTCTCCTGATCCAGAAGATCACCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS-3UTR TCA 90 bp | GTGGGCACATCTCTCCACAGGCTCACATTCATCTTCAGGCCACAATGTAGGTGTTGGCCCACCAGTAACTaGAGAAATGTGTTTGATATA | + |
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Preference number: 4 (lower is better) Translates to: VGTSLHRLTFIFRPQCRCWPTSN*RNVFDI Trigger: TATATCAAACACATTTCTTCAGTTACTGGTGGGCCA...ACACCTACATTGTGGCCTGAAGATGAATGTGAGCCTGTGGAGAGATGTGCCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS-3UTR TCA 90 bp | TTGACAACATGTAGAATCTCCTGGAACACCCAGTTCTGGGTCAAAACGTGTTTGATCGAAGGTGTACCTTaGAGTCATCCACAGACATGT | + |
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Preference number: 4 (lower is better) Translates to: LTTCRISWNTQFWVKTCLIEGVP*SHPQTC Trigger: ACATGTCTGTGGATGACTTCAAGGTACACCTTCGAT...CAAACACGTTTTGACCCAGAACTGGGTGTTCCAGGAGATTCTACATGTTGTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS-3UTR CCA 90 bp | TTGACAACATGTAGAATCTCCTGGAACACCCAGTTCTGGGTCAAAACGTGTTTGCTTTGGGTGTGGGTATaGAGTTCTCTTCATGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: LTTCRISWNTQFWVKTCLLWVWV*SSLHGC Trigger: ACAACCATGAAGAGAACTCCATACCCACACCCAAAG...CAAACACGTTTTGACCCAGAACTGGGTGTTCCAGGAGATTCTACATGTTGTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS-3UTR TCA 90 bp | TCAAATAAACAAGATAGGCCTTGGAGGCTAGCTTTAGGAATAGAATGTAATGGGGGCAATGTTTTCCAGTaGAGCATCATCCAGCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: SNKQDRPWRLALGIECNGGNVFQ*SIIQPK Trigger: TTTGGGCTGGATGATGCTTCACTGGAAAACATTGCC...CCCATTACATTCTATTCCTAAAGCTAGCCTCCAAGGCCTATCTTGTTTATTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS-3UTR CCA 90 bp | CAGCTGCTGACAACTTCTTTCTGCAAGATGTCAGCAATAGCTTTCCTCTGTGAAGACATGTTCAAATCCTaGGCAATGTTTTCCAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: QLLTTSFCKMSAIAFLCEDMFKS*AMFSSE Trigger: TTCACTGGAAAACATTGCCCAGGATTTGAACATGTC...TTCACAGAGGAAAGCTATTGCTGACATCTTGCAGAAAGAAGTTGTCAGCAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS-3UTR TCA 90 bp | CAGCTGCTGACAACTTCTTTCTGCAAGATGTCAGCAATAGCTTTCCTCTGTGAATTTGAAACGTGTAGCTaGGATGATAATGAAGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: QLLTTSFCKMSAIAFLCEFETCS*DDNEEV Trigger: GACTTCTTCATTATCATCTCAGCTACACGTTTCAAA...TTCACAGAGGAAAGCTATTGCTGACATCTTGCAGAAAGAAGTTGTCAGCAGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS-3UTR CCA 90 bp | TCAAATAAACAAGATAGGCCTTGGAGGCTAGCTTTAGGAATAGAATGTAATGGGTTTAGTTTCCAGCTTTaGGAAGTCATACTTCGATAT | + |
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Preference number: 4 (lower is better) Translates to: SNKQDRPWRLALGIECNGFSFQL*EVILRY Trigger: ATATCGAAGTATGACTTCCCAAAGCTGGAAACTAAA...CCCATTACATTCTATTCCTAAAGCTAGCCTCCAAGGCCTATCTTGTTTATTTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS CCA 90 bp | AGGCAGGTCCCATATTGTCACGTTGGGAAGCTTTGGGTGTGGGTATaGAGTTCTCTTCATGGTTGTCTCTATTGCCCCAGTGGGGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: RQVPYCHVGKLWVWV*SSLHGCLYCPSGGC Trigger: GCAGCCCCCACTGGGGCAATAGAGACAACCATGAAGAGAACTCCATACCCACACCCAAAGCTTCCCAACGTGACAATATGGGACCTGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068063.4 ENSMUST00000146439.8 |
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| CDS CCA 90 bp | AATGCCAGGCAGGTCCCATATTGTCACGTTGGGAAGCTTTGGGTGTaGGTATGGAGTTCTCTTCATGGTTGTCTCTATTGCCCCAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: NARQVPYCHVGKLWV*VWSSLHGCLYCPSG Trigger: CCCACTGGGGCAATAGAGACAACCATGAAGAGAACTCCATACCCACACCCAAAGCTTCCCAACGTGACAATATGGGACCTGCCTGGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068063.4 ENSMUST00000146439.8 |
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| CDS CCA 90 bp | GCCTCAGTAAGACTTTGCAAAGACAGTGAGAAGACGTGGCGCTTGTaGGCTGGGAGATCCTGTAGGAGTTTAGTTTCCAGCTTTGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: ASVRLCKDSEKTWRL*AGRSCRSLVSSFGK Trigger: CTTCCCAAAGCTGGAAACTAAACTCCTACAGGATCTCCCAGCCCACAAGCGCCACGTCTTCTCACTGTCTTTGCAAAGTCTTACTGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS CCA 90 bp | TTAATGGTGGCCTCAGTAAGACTTTGCAAAGACAGTGAGAAGACGTaGCGCTTGTGGGCTGGGAGATCCTGTAGGAGTTTAGTTTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: LMVASVRLCKDSEKT*RLWAGRSCRSLVSS Trigger: GCTGGAAACTAAACTCCTACAGGATCTCCCAGCCCACAAGCGCCACGTCTTCTCACTGTCTTTGCAAAGTCTTACTGAGGCCACCATTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS CCA 90 bp | GTCCCACCTTCTTCTCAAAAAGTGCTTTACTATTCAGAAGAGCTATaGCATCATTGGCTGCAGTATCAAGAAAGAGATTCTGCAAATAAT | + |
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Preference number: 5 (lower is better) Translates to: VPPSSQKVLYYSEEL*HHWLQYQERDSANN Trigger: ATTATTTGCAGAATCTCTTTCTTGATACTGCAGCCAATGATGCCATAGCTCTTCTGAATAGTAAAGCACTTTTTGAGAAGAAGGTGGGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS GCA 90 bp | CTCAAAAAGTGCTTTACTATTCAGAAGAGCTATGGCATCATTGGCTaGAGTATCAAGAAAGAGATTCTGCAAATAATAAGCCATGCGATA | + |
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Preference number: 5 (lower is better) Translates to: LKKCFTIQKSYGIIG*SIKKEILQIISHAI Trigger: TATCGCATGGCTTATTATTTGCAGAATCTCTTTCTTGATACTGCAGCCAATGATGCCATAGCTCTTCTGAATAGTAAAGCACTTTTTGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS CCA 90 bp | TCTTCTCAAAAAGTGCTTTACTATTCAGAAGAGCTATGGCATCATTaGCTGCAGTATCAAGAAAGAGATTCTGCAAATAATAAGCCATGC | + |
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Preference number: 5 (lower is better) Translates to: SSQKVLYYSEELWHH*LQYQERDSANNKPC Trigger: GCATGGCTTATTATTTGCAGAATCTCTTTCTTGATACTGCAGCCAATGATGCCATAGCTCTTCTGAATAGTAAAGCACTTTTTGAGAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS CCA 72 bp | TGGGAAGCTTTGGGTGTGGGTATGGAGTTCTCTTCATaGTTGTCTCTATTGCCCCAGTGGGGGCTGCACCTT | + |
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Preference number: 6 (lower is better) Translates to: WEALGVGMEFSS*LSLLPQWGLHL Trigger: AAGGTGCAGCCCCCACTGGGGCAATAGAGACAACCATGAAGAGAACTCCATACCCACACCCAAAGCTTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068063.4 ENSMUST00000146439.8 |
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| CDS TCA 72 bp | GTTAATGGTGGCCTCAGTAAGACTTTGCAAAGACAGTaGGAAGACGTGGCGCTTGTGGGCTGGGAGATCCTG | + |
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Preference number: 6 (lower is better) Translates to: VNGGLSKTLQRQ*EDVALVGWEIL Trigger: CAGGATCTCCCAGCCCACAAGCGCCACGTCTTCTCACTGTCTTTGCAAAGTCTTACTGAGGCCACCATTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS CCA 72 bp | GCCAGGCAGGTCCCATATTGTCACGTTGGGAAGCTTTaGGTGTGGGTATGGAGTTCTCTTCATGGTTGTCTC | + |
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Preference number: 6 (lower is better) Translates to: ARQVPYCHVGKL*VWVWSSLHGCL Trigger: GAGACAACCATGAAGAGAACTCCATACCCACACCCAAAGCTTCCCAACGTGACAATATGGGACCTGCCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068063.4 ENSMUST00000146439.8 |
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| CDS CAA 90 bp | GTGGCCTCAGTAAGACTTTGCAAAGACAGTGAGAAGACGTGGCGCTaGTGGGCTGGGAGATCCTGTAGGAGTTTAGTTTCCAGCTTTGGG | + |
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Preference number: 6 (lower is better) Translates to: VASVRLCKDSEKTWR*WAGRSCRSLVSSFG Trigger: CCCAAAGCTGGAAACTAAACTCCTACAGGATCTCCCAGCCCACAAGCGCCACGTCTTCTCACTGTCTTTGCAAAGTCTTACTGAGGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS CCA 72 bp | AGACTTTGCAAAGACAGTGAGAAGACGTGGCGCTTGTaGGCTGGGAGATCCTGTAGGAGTTTAGTTTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RLCKDSEKTWRL*AGRSCRSLVSS Trigger: GCTGGAAACTAAACTCCTACAGGATCTCCCAGCCCACAAGCGCCACGTCTTCTCACTGTCTTTGCAAAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS CCA 72 bp | GCCTCAGTAAGACTTTGCAAAGACAGTGAGAAGACGTaGCGCTTGTGGGCTGGGAGATCCTGTAGGAGTTTA | + |
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Preference number: 6 (lower is better) Translates to: ASVRLCKDSEKT*RLWAGRSCRSL Trigger: TAAACTCCTACAGGATCTCCCAGCCCACAAGCGCCACGTCTTCTCACTGTCTTTGCAAAGTCTTACTGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS CAA 72 bp | GAAGCTTTGGGTGTGGGTATGGAGTTCTCTTCATGGTaGTCTCTATTGCCCCAGTGGGGGCTGCACCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: EALGVGMEFSSW*SLLPQWGLHLF Trigger: AAAAAGGTGCAGCCCCCACTGGGGCAATAGAGACAACCATGAAGAGAACTCCATACCCACACCCAAAGCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000068063.4 ENSMUST00000146439.8 |
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| CDS CAA 72 bp | TGCCAGGCAGGTCCCATATTGTCACGTTGGGAAGCTTaGGGTGTGGGTATGGAGTTCTCTTCATGGTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: CQAGPILSRWEA*GVGMEFSSWLS Trigger: AGACAACCATGAAGAGAACTCCATACCCACACCCAAAGCTTCCCAACGTGACAATATGGGACCTGCCTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000068063.4 ENSMUST00000146439.8 |
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| CDS CAA 72 bp | GTAAGACTTTGCAAAGACAGTGAGAAGACGTGGCGCTaGTGGGCTGGGAGATCCTGTAGGAGTTTAGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: VRLCKDSEKTWR*WAGRSCRSLVS Trigger: GGAAACTAAACTCCTACAGGATCTCCCAGCCCACAAGCGCCACGTCTTCTCACTGTCTTTGCAAAGTCTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS CCA 72 bp | CCATATTGTCACGTTGGGAAGCTTTGGGTGTGGGTATaGAGTTCTCTTCATGGTTGTCTCTATTGCCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: PYCHVGKLWVWV*SSLHGCLYCPS Trigger: ACTGGGGCAATAGAGACAACCATGAAGAGAACTCCATACCCACACCCAAAGCTTCCCAACGTGACAATATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000068063.4 ENSMUST00000146439.8 |
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| CDS CCA 72 bp | CACCAAGTGGAATGGTGGCTAATGCTCCAGCCTTCATaGCTTCTAGGAAGACTTTTTGCTTCAGGGAATCTC | + |
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Preference number: 6 (lower is better) Translates to: HQVEWWLMLQPS*LLGRLFASGNL Trigger: GAGATTCCCTGAAGCAAAAAGTCTTCCTAGAAGCCATGAAGGCTGGAGCATTAGCCACCATTCCACTTGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS CCA 72 bp | GTACTCACCAAACTTCATTTCTGTCAGATAGTTTTGTaGTGTGAAGTTAGTGGTCCCAATGCCAGGCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: VLTKLHFCQIVL*CEVSGPNARQV Trigger: GACCTGCCTGGCATTGGGACCACTAACTTCACACCACAAAACTATCTGACAGAAATGAAGTTTGGTGAGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS CCA 72 bp | TGTACCTTGAAGTCATCCACAGACATGTTCAAATCCTaGGCAATGTTTTCCAGTGAAGCATCATCCAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: CTLKSSTDMFKS*AMFSSEASSSP Trigger: TGGGCTGGATGATGCTTCACTGGAAAACATTGCCCAGGATTTGAACATGTCTGTGGATGACTTCAAGGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS CAA 72 bp | TGTTCTGCAAACAAATGGGGAAATCGAAGGTGTACCTaGAAGTCATCCACAGACATGTTCAAATCCTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: CSANKWGNRRCT*KSSTDMFKSWA Trigger: TGCCCAGGATTTGAACATGTCTGTGGATGACTTCAAGGTACACCTTCGATTTCCCCATTTGTTTGCAGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS CAA 72 bp | TGTGCAATGGCTTTGGCCAGTTGTGCATCATTTTCTTaGAAACGTGTAGCTGAGATGATAATGAAGAAGTCG | + |
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Preference number: 6 (lower is better) Translates to: CAMALASCASFS*KRVAEMIMKKS Trigger: CGACTTCTTCATTATCATCTCAGCTACACGTTTCAAAGAAAATGATGCACAACTGGCCAAAGCCATTGCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS TCA 72 bp | TCTGTTCATTATCTAAGTCGCTGTCTATCTTGGTTCTaGCAAAGTAGAAATTCATCCCCATCTGTGCAATGG | + |
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Preference number: 6 (lower is better) Translates to: SVHYLSRCLSWF*QSRNSSPSVQW Trigger: CCATTGCACAGATGGGGATGAATTTCTACTTTGTCAGAACCAAGATAGACAGCGACTTAGATAATGAACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS CCA 72 bp | TCTTCTCAAAAAGTGCTTTACTATTCAGAAGAGCTATaGCATCATTGGCTGCAGTATCAAGAAAGAGATTCT | + |
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Preference number: 6 (lower is better) Translates to: SSQKVLYYSEEL*HHWLQYQERDS Trigger: AGAATCTCTTTCTTGATACTGCAGCCAATGATGCCATAGCTCTTCTGAATAGTAAAGCACTTTTTGAGAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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| CDS CCA 72 bp | AAAGTGCTTTACTATTCAGAAGAGCTATGGCATCATTaGCTGCAGTATCAAGAAAGAGATTCTGCAAATAAT | + |
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Preference number: 6 (lower is better) Translates to: KVLYYSEELWHH*LQYQERDSANN Trigger: ATTATTTGCAGAATCTCTTTCTTGATACTGCAGCCAATGATGCCATAGCTCTTCTGAATAGTAAAGCACTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068063.4 |
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