Pregenerated sensors for TGS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028233Ensembl transcript IDs: ENSMUST00000052712.6
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAAGGGAAGGCAATGAACGCACAGTGAGTGCATCAATGGAGAAGTaGACCGGGGTACACTGTTATACTGCGATCTTTTCTTCAGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: QREGNERTVSASMEK*TGVHCYTAIFSSEE Trigger: TTCTTCTGAAGAAAAGATCGCAGTATAACAGTGTACCCCGGTGCACTTCTCCATTGATGCACTCACTGTGCGTTCATTGCCTTCCCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR CCA 90 bp | GACTTTAACTTGATTCCCAGGAACCCACATGGTGTAAGTAGAGAATaGACTCTAGCAAGTTGTCCTCTGACCTCTACACACACGCATGCA | + |
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Preference number: 1 (lower is better) Translates to: DFNLIPRNPHGVSRE*TLASCPLTSTHTHA Trigger: TGCATGCGTGTGTGTAGAGGTCAGAGGACAACTTGCTAGAGTCCATTCTCTACTTACACCATGTGGGTTCCTGGGAATCAAGTTAAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR TCA 90 bp | CACAGTATTAAAGAACCTAGGAAGGCCTTCCTCCTGTCTCTCACTTaGATGTCATACATCCTCACTCCACATGATCTCTCTGTGCTTTAC | + |
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Preference number: 1 (lower is better) Translates to: HSIKEPRKAFLLSLT*MSYILTPHDLSVLY Trigger: GTAAAGCACAGAGAGATCATGTGGAGTGAGGATGTATGACATTCAAGTGAGAGACAGGAGGAAGGCCTTCCTAGGTTCTTTAATACTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR GCA 90 bp | CATGATCTTTCTGAAGTGCTGGGATTGCAGGCACCACTATCACCTTaGCCTGATGCTGTTTTAAAGTGTACAACACAGATCCATTACCAT | + |
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Preference number: 1 (lower is better) Translates to: HDLSEVLGLQAPLSP*PDAVLKCTTQIHYH Trigger: ATGGTAATGGATCTGTGTTGTACACTTTAAAACAGCATCAGGGCAAGGTGATAGTGGTGCCTGCAATCCCAGCACTTCAGAAAGATCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR-3UTR GCA 90 bp | GAATGGCTTTCAAGATACTCTGATAAGCCAGGTGCAGTAGGTGGAGCCAGAAGGCTGAAGTGCTGGGATTaGAGGCACCACTATCACCTT | + |
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Preference number: 2 (lower is better) Translates to: EWLSRYSDKPGAVGGARRLKCWD*RHHYHL Trigger: AAGGTGATAGTGGTGCCTGCAATCCCAGCACTTCAG...CCTTCTGGCTCCACCTACTGCACCTGGCTTATCAGAGTATCTTGAAAGCCATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR-3UTR GCA 90 bp | GAATGGCTTTCAAGATACTCTGATAAGCCAGGTGCAGTAGGTGGAGCCAGAAGGGCATCAATGGAGAAGTaGACCGGGGTACACTGTTAT | + |
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Preference number: 2 (lower is better) Translates to: EWLSRYSDKPGAVGGARRASMEK*TGVHCY Trigger: ATAACAGTGTACCCCGGTGCACTTCTCCATTGATGC...CCTTCTGGCTCCACCTACTGCACCTGGCTTATCAGAGTATCTTGAAAGCCATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR-3UTR GCA 90 bp | GAATGGCTTTCAAGATACTCTGATAAGCCAGGTGCAGTAGGTGGAGCCAGAAGGCACGCACATCTCTCTTaGGCACAAACACATTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: EWLSRYSDKPGAVGGARRHAHLS*AQTHSL Trigger: GAGAGAATGTGTTTGTGCGCAAGAGAGATGTGCGTG...CCTTCTGGCTCCACCTACTGCACCTGGCTTATCAGAGTATCTTGAAAGCCATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR-3UTR TCA 90 bp | GAATGGCTTTCAAGATACTCTGATAAGCCAGGTGCAGTAGGTGGAGCCAGAAGGCTAATGACTTTAACTTaGTTCCCAGGAACCCACATG | + |
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Preference number: 2 (lower is better) Translates to: EWLSRYSDKPGAVGGARRLMTLT*FPGTHM Trigger: CATGTGGGTTCCTGGGAATCAAGTTAAAGTCATTAG...CCTTCTGGCTCCACCTACTGCACCTGGCTTATCAGAGTATCTTGAAAGCCATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR-3UTR CCA 90 bp | GAATGGCTTTCAAGATACTCTGATAAGCCAGGTGCAGTAGGTGGAGCCAGAAGGGGTGTAAGTAGAGAATaGACTCTAGCAAGTTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: EWLSRYSDKPGAVGGARRGVSRE*TLASCP Trigger: AGGACAACTTGCTAGAGTCCATTCTCTACTTACACC...CCTTCTGGCTCCACCTACTGCACCTGGCTTATCAGAGTATCTTGAAAGCCATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR-3UTR CCA 90 bp | GAATGGCTTTCAAGATACTCTGATAAGCCAGGTGCAGTAGGTGGAGCCAGAAGGTTAAAAAGCCCATCTTaGGCTGGAGAGAGAACTTAC | + |
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Preference number: 2 (lower is better) Translates to: EWLSRYSDKPGAVGGARRLKSPS*AGERTY Trigger: GTAAGTTCTCTCTCCAGCCCAAGATGGGCTTTTTAA...CCTTCTGGCTCCACCTACTGCACCTGGCTTATCAGAGTATCTTGAAAGCCATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR-3UTR TCA 90 bp | AATGTACAAAAGCCCAGTGGTGTAACTTCTAGAAACTTACCAACTGAAATACTTACAAAGGGAAGGCAATaGACGCACAGTGAGTGCATC | + |
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Preference number: 2 (lower is better) Translates to: NVQKPSGVTSRNLPTEILTKGRQ*THSECI Trigger: GATGCACTCACTGTGCGTTCATTGCCTTCCCTTTGT...AAGTATTTCAGTTGGTAAGTTTCTAGAAGTTACACCACTGGGCTTTTGTACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR-3UTR CAA 90 bp | CCCATCTTGGGCTGGAGAGAGAACTTACTTCCACTTCCAGAGGACCCAAGTGCAACACGCACATCTCTCTaGCGCACAAACACATTCTCT | + |
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Preference number: 3 (lower is better) Translates to: PILGWRENLLPLPEDPSATRTSL*RTNTFS Trigger: AGAGAATGTGTTTGTGCGCAAGAGAGATGTGCGTGT...TGCACTTGGGTCCTCTGGAAGTGGAAGTAAGTTCTCTCTCCAGCCCAAGATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR GCA 72 bp | GCACAGCATGAGCTTGAACTCATGATCTTTCTGAAGTaGTGGGATTGCAGGCACCACTATCACCTTGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: AQHELELMIFLK*WDCRHHYHLAL Trigger: CAGGGCAAGGTGATAGTGGTGCCTGCAATCCCAGCACTTCAGAAAGATCATGAGTTCAAGCTCATGCTGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR CCA 72 bp | CAGCATGAGCTTGAACTCATGATCTTTCTGAAGTGCTaGGATTGCAGGCACCACTATCACCTTGCCCTGATG | + |
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Preference number: 3 (lower is better) Translates to: QHELELMIFLKC*DCRHHYHLALM Trigger: CATCAGGGCAAGGTGATAGTGGTGCCTGCAATCCCAGCACTTCAGAAAGATCATGAGTTCAAGCTCATGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR TCA 72 bp | TTAAGTATCCACAAAGGGAAGGCAATGAACGCACAGTaGGTGCATCAATGGAGAAGTGCACCGGGGTACACT | + |
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Preference number: 3 (lower is better) Translates to: LSIHKGKAMNAQ*VHQWRSAPGYT Trigger: AGTGTACCCCGGTGCACTTCTCCATTGATGCACTCACTGTGCGTTCATTGCCTTCCCTTTGTGGATACTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR GCA 72 bp | GAGCTTGAACTCATGATCTTTCTGAAGTGCTGGGATTaGAGGCACCACTATCACCTTGCCCTGATGCTGTTT | + |
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Preference number: 3 (lower is better) Translates to: ELELMIFLKCWD*RHHYHLALMLF Trigger: AAACAGCATCAGGGCAAGGTGATAGTGGTGCCTGCAATCCCAGCACTTCAGAAAGATCATGAGTTCAAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR GCA 72 bp | GGCAATGAACGCACAGTGAGTGCATCAATGGAGAAGTaGACCGGGGTACACTGTTATACTGCGATCTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: GNERTVSASMEK*TGVHCYTAIFS Trigger: AGAAAAGATCGCAGTATAACAGTGTACCCCGGTGCACTTCTCCATTGATGCACTCACTGTGCGTTCATTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR CCA 72 bp | TGTAACTCCAGCTATAAGGAATCCAACACTCTTCCCTaGACTTGGGTCAAAGTAGGCGCACACACATGCACA | + |
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Preference number: 3 (lower is better) Translates to: CNSSYKESNTLP*TWVKVGAHTCT Trigger: TGTGCATGTGTGTGCGCCTACTTTGACCCAAGTCCAGGGAAGAGTGTTGGATTCCTTATAGCTGGAGTTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR-3UTR CAA 90 bp | GAATGGCTTTCAAGATACTCTGATAAGCCAGGTGCAGTAGGTGGAGCCAGAAGGATTAAAAAGCCCATCTaGGGCTGGAGAGAGAACTTA | + |
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Preference number: 3 (lower is better) Translates to: EWLSRYSDKPGAVGGARRIKKPI*GWRENL Trigger: TAAGTTCTCTCTCCAGCCCAAGATGGGCTTTTTAAT...CCTTCTGGCTCCACCTACTGCACCTGGCTTATCAGAGTATCTTGAAAGCCATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR TCA 72 bp | CCAGAGGACCCAAGTGCATTTCCCAGTACCCACATTTaGCAGCTCATAACCATCTGTAACTCCAGCTATAAG | + |
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Preference number: 3 (lower is better) Translates to: PEDPSAFPSTHI*QLITICNSSYK Trigger: CTTATAGCTGGAGTTACAGATGGTTATGAGCTGTCAAATGTGGGTACTGGGAAATGCACTTGGGTCCTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR CCA 72 bp | TTGATTCCCAGGAACCCACATGGTGTAAGTAGAGAATaGACTCTAGCAAGTTGTCCTCTGACCTCTACACAC | + |
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Preference number: 3 (lower is better) Translates to: LIPRNPHGVSRE*TLASCPLTSTH Trigger: GTGTGTAGAGGTCAGAGGACAACTTGCTAGAGTCCATTCTCTACTTACACCATGTGGGTTCCTGGGAATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR TCA 72 bp | AAAGAACCTAGGAAGGCCTTCCTCCTGTCTCTCACTTaGATGTCATACATCCTCACTCCACATGATCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: KEPRKAFLLSLT*MSYILTPHDLS Trigger: AGAGAGATCATGTGGAGTGAGGATGTATGACATTCAAGTGAGAGACAGGAGGAAGGCCTTCCTAGGTTCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR TCA 72 bp | AGTGCTGGGATTGCAGGCACCACTATCACCTTGCCCTaGTGCTGTTTTAAAGTGTACAACACAGATCCATTA | + |
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Preference number: 3 (lower is better) Translates to: SAGIAGTTITLP*CCFKVYNTDPL Trigger: TAATGGATCTGTGTTGTACACTTTAAAACAGCATCAGGGCAAGGTGATAGTGGTGCCTGCAATCCCAGCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR TCA 72 bp | TTTTGTGGCAAGATCTCATGTAGCTCAGGCCAGCCTTaGTTTGTTAGGAAGCACAGCATGAGCTTGAACTCA | + |
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Preference number: 3 (lower is better) Translates to: FCGKISCSSGQP*FVRKHSMSLNS Trigger: TGAGTTCAAGCTCATGCTGTGCTTCCTAACAAATCAAGGCTGGCCTGAGCTACATGAGATCTTGCCACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR CCA 72 bp | AAAGCAAAAACACTGATTAAAAAGCCCATCTTGGGCTaGAGAGAGAACTTACTTCCACTTCCAGAGGACCCA | + |
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Preference number: 3 (lower is better) Translates to: KAKTLIKKPILG*RENLLPLPEDP Trigger: TGGGTCCTCTGGAAGTGGAAGTAAGTTCTCTCTCCAGCCCAAGATGGGCTTTTTAATCAGTGTTTTTGCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| 3UTR CCA 72 bp | GCGATCTTTTCTTCAGAAGAATTAAGAGGGGACCAATaGGTTGGCTCAGTAGGTAAAGGCTCTGGTTATAAA | + |
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Preference number: 3 (lower is better) Translates to: AIFSSEELRGDQ*VGSVGKGSGYK Trigger: TTTATAACCAGAGCCTTTACCTACTGAGCCAACCCATTGGTCCCCTCTTAATTCTTCTGAAGAAAAGATCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR CCA 90 bp | CCCATCTTGGGCTGGAGAGAGAACTTACTTCCACTTCCAGAGGACCCAAGTGCAAAGAGCCTGTATCTCTaGGCCCAGTATTTAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PILGWRENLLPLPEDPSAKSLYL*AQYLAS Trigger: GCTGGCTAAATACTGGGCCCAGAGATACAGGCTCTT...TGCACTTGGGTCCTCTGGAAGTGGAAGTAAGTTCTCTCTCCAGCCCAAGATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR GCA 90 bp | ACTCATGATCTTTCTGAAGTGCTGGGATTGCAGGCACCACTATCACCTTGCCCTTTCTCCTGCCAGCTTTaGCACAACAGCCCTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: THDLSEVLGLQAPLSPCPFSCQL*HNSPSP Trigger: TGGAGAAGGGCTGTTGTGGCAAAGCTGGCAGGAGAA...AGGGCAAGGTGATAGTGGTGCCTGCAATCCCAGCACTTCAGAAAGATCATGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR CCA 90 bp | GGAAGGCCTTCCTCCTGTCTCTCACTTGAATGTCATACATCCTCACTCCACATGGGGCTTATGCTCAGGTaGGTCATCGTCACTCTCATG | + |
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Preference number: 4 (lower is better) Translates to: GRPSSCLSLECHTSSLHMGLMLR*VIVTLM Trigger: CATGAGAGTGACGATGACCCACCTGAGCATAAGCCC...CATGTGGAGTGAGGATGTATGACATTCAAGTGAGAGACAGGAGGAAGGCCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR CCA 90 bp | GGAAGGCCTTCCTCCTGTCTCTCACTTGAATGTCATACATCCTCACTCCACATGCCGCTTCAGAAGTGCTaGTCTTCAGAAGTGCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: GRPSSCLSLECHTSSLHMPLQKC*SSEVLV Trigger: GACCAGCACTTCTGAAGACCAGCACTTCTGAAGCGG...CATGTGGAGTGAGGATGTATGACATTCAAGTGAGAGACAGGAGGAAGGCCTTCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR TCA 90 bp | GAATGGCTTTCAAGATACTCTGATAAGCCAGGTGCAGTAGGTGGAGCCAGAAGGCTTCTCAGGAGTGACTaGAAACCAGCCCTCTTTGTC | + |
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Preference number: 4 (lower is better) Translates to: EWLSRYSDKPGAVGGARRLLRSD*KPALFV Trigger: GACAAAGAGGGCTGGTTTTCAGTCACTCCTGAGAAG...CCTTCTGGCTCCACCTACTGCACCTGGCTTATCAGAGTATCTTGAAAGCCATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR CCA 90 bp | GGAAGGCCTTCCTCCTGTCTCTCACTTGAATGTCATACATCCTCACTCCACATGAGCATTTCGGCCACATaGTTCCACTTCTCGCAACAC | + |
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Preference number: 4 (lower is better) Translates to: GRPSSCLSLECHTSSLHMSISAT*FHFSQH Trigger: GTGTTGCGAGAAGTGGAACCATGTGGCCGAAATGCT...CATGTGGAGTGAGGATGTATGACATTCAAGTGAGAGACAGGAGGAAGGCCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR CCA 90 bp | GAATGGCTTTCAAGATACTCTGATAAGCCAGGTGCAGTAGGTGGAGCCAGAAGGCAGGTTCTGGATCTCTaGTCTCCATCAGGTTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: EWLSRYSDKPGAVGGARRQVLDL*SPSGCQ Trigger: CTGACAACCTGATGGAGACCAGAGATCCAGAACCTG...CCTTCTGGCTCCACCTACTGCACCTGGCTTATCAGAGTATCTTGAAAGCCATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR TCA 90 bp | TCTGAAGTGCTGGGATTGCAGGCACCACTATCACCTTGCCCTGATGCTGTTTTACATGTCTTGTTCCTCTaGGTCACTGCTTGTGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: SEVLGLQAPLSPCPDAVLHVLFL*VTACAS Trigger: ACTTGCACAAGCAGTGACTCAGAGGAACAAGACATG...TAAAACAGCATCAGGGCAAGGTGATAGTGGTGCCTGCAATCCCAGCACTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR TCA 90 bp | ACTCATGATCTTTCTGAAGTGCTGGGATTGCAGGCACCACTATCACCTTGCCCTCAATCTTCTCAGGAGTaGCTGAAAACCAGCCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: THDLSEVLGLQAPLSPCPQSSQE*LKTSPL Trigger: AAGAGGGCTGGTTTTCAGTCACTCCTGAGAAGATTG...AGGGCAAGGTGATAGTGGTGCCTGCAATCCCAGCACTTCAGAAAGATCATGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR TCA 90 bp | AATGGAGAAGTGCACCGGGGTACACTGTTATACTGCGATCTTTTCTTCAGAAGATCACATCTGAAGGCCTaGCTGACACGGCCAGCAATG | + |
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Preference number: 4 (lower is better) Translates to: NGEVHRGTLLYCDLFFRRSHLKA*LTRPAM Trigger: CATTGCTGGCCGTGTCAGTCAGGCCTTCAGATGTGA...TCTTCTGAAGAAAAGATCGCAGTATAACAGTGTACCCCGGTGCACTTCTCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR TCA 90 bp | CCCATCTTGGGCTGGAGAGAGAACTTACTTCCACTTCCAGAGGACCCAAGTGCATCTTCTGGGAAAGCCTaGAAATTTCAAAGCCATCAG | + |
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Preference number: 4 (lower is better) Translates to: PILGWRENLLPLPEDPSASSGKA*KFQSHQ Trigger: CTGATGGCTTTGAAATTTTCAGGCTTTCCCAGAAGA...TGCACTTGGGTCCTCTGGAAGTGGAAGTAAGTTCTCTCTCCAGCCCAAGATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR CCA 90 bp | GGAAGGCCTTCCTCCTGTCTCTCACTTGAATGTCATACATCCTCACTCCACATGTTCTCTTCACTTTGCTaGGCTTATGCTCAGGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: GRPSSCLSLECHTSSLHMFSSLC*AYAQVG Trigger: ACCCACCTGAGCATAAGCCCAGCAAAGTGAAGAGAA...CATGTGGAGTGAGGATGTATGACATTCAAGTGAGAGACAGGAGGAAGGCCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR TCA 90 bp | ACTCATGATCTTTCTGAAGTGCTGGGATTGCAGGCACCACTATCACCTTGCCCTTTCATTTGGGCTATGTaGTTCTGCAGTGCCATTGGA | + |
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Preference number: 4 (lower is better) Translates to: THDLSEVLGLQAPLSPCPFIWAM*FCSAIG Trigger: TCCAATGGCACTGCAGAATCACATAGCCCAAATGAA...AGGGCAAGGTGATAGTGGTGCCTGCAATCCCAGCACTTCAGAAAGATCATGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR TCA 90 bp | CCCATCTTGGGCTGGAGAGAGAACTTACTTCCACTTCCAGAGGACCCAAGTGCAGAACCTGCTTTGCTTTaGATTTCACATGTTCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: PILGWRENLLPLPEDPSAEPALL*ISHVLL Trigger: CAACAGAACATGTGAAATTCAAAGCAAAGCAGGTTC...TGCACTTGGGTCCTCTGGAAGTGGAAGTAAGTTCTCTCTCCAGCCCAAGATGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR TCA 90 bp | GGAAGGCCTTCCTCCTGTCTCTCACTTGAATGTCATACATCCTCACTCCACATGAGAAAGAGAATCCTGTaGTGTCTCCTCATCTACTCG | + |
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Preference number: 4 (lower is better) Translates to: GRPSSCLSLECHTSSLHMRKRIL*CLLIYS Trigger: CGAGTAGATGAGGAGACATCACAGGATTCTCTTTCT...CATGTGGAGTGAGGATGTATGACATTCAAGTGAGAGACAGGAGGAAGGCCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR TCA 90 bp | ACTCATGATCTTTCTGAAGTGCTGGGATTGCAGGCACCACTATCACCTTGCCCTCCGGTTAAGGCAAACTaGATGGTATTTCCTCCAACT | + |
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Preference number: 4 (lower is better) Translates to: THDLSEVLGLQAPLSPCPPVKAN*MVFPPT Trigger: AGTTGGAGGAAATACCATTCAGTTTGCCTTAACCGG...AGGGCAAGGTGATAGTGGTGCCTGCAATCCCAGCACTTCAGAAAGATCATGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR GCA 90 bp | CCCATCTTGGGCTGGAGAGAGAACTTACTTCCACTTCCAGAGGACCCAAGTGCATTTTGTCCTGAGCCATaGTTGAATCCTAGAAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: PILGWRENLLPLPEDPSAFCPEP*LNPRRK Trigger: TTTCCTTCTAGGATTCAAGCATGGCTCAGGACAAAA...TGCACTTGGGTCCTCTGGAAGTGGAAGTAAGTTCTCTCTCCAGCCCAAGATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR TCA 90 bp | AATGGAGAAGTGCACCGGGGTACACTGTTATACTGCGATCTTTTCTTCAGAAGAGCAGTGCCATTGGAATaGCCATCTTCCTCCTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: NGEVHRGTLLYCDLFFRRAVPLE*PSSSSS Trigger: AGAAGAGGAGGAAGATGGTCATTCCAATGGCACTGC...TCTTCTGAAGAAAAGATCGCAGTATAACAGTGTACCCCGGTGCACTTCTCCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR TCA 90 bp | TCTGAAGTGCTGGGATTGCAGGCACCACTATCACCTTGCCCTGATGCTGTTTTATTTATCACAGTTTTGTaGGGCAGTAAAAGTCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SEVLGLQAPLSPCPDAVLFITVL*GSKSPA Trigger: GGCTGGACTTTTACTGCCTCACAAAACTGTGATAAA...TAAAACAGCATCAGGGCAAGGTGATAGTGGTGCCTGCAATCCCAGCACTTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR TCA 90 bp | GGAAGGCCTTCCTCCTGTCTCTCACTTGAATGTCATACATCCTCACTCCACATGTTTAGCTGGTTGGTCTaGGCTTCTGTTCTCAGATAT | + |
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Preference number: 4 (lower is better) Translates to: GRPSSCLSLECHTSSLHMFSWLV*ASVLRY Trigger: ATATCTGAGAACAGAAGCTCAGACCAACCAGCTAAA...CATGTGGAGTGAGGATGTATGACATTCAAGTGAGAGACAGGAGGAAGGCCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR TCA 90 bp | TCTGAAGTGCTGGGATTGCAGGCACCACTATCACCTTGCCCTGATGCTGTTTTACCTCTTTGTCCAATTTaGTTCCATCATCAAAGCGAG | + |
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Preference number: 4 (lower is better) Translates to: SEVLGLQAPLSPCPDAVLPLCPI*FHHQSE Trigger: CTCGCTTTGATGATGGAATCAAATTGGACAAAGAGG...TAAAACAGCATCAGGGCAAGGTGATAGTGGTGCCTGCAATCCCAGCACTTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR GCA 90 bp | GGAAGGCCTTCCTCCTGTCTCTCACTTGAATGTCATACATCCTCACTCCACATGTGTACCTTGGTCTCCTaGATTATTGCCACTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GRPSSCLSLECHTSSLHMCTLVS*IIATAF Trigger: AAAAGCAGTGGCAATAATGCAGGAGACCAAGGTACA...CATGTGGAGTGAGGATGTATGACATTCAAGTGAGAGACAGGAGGAAGGCCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR GCA 90 bp | ACTCATGATCTTTCTGAAGTGCTGGGATTGCAGGCACCACTATCACCTTGCCCTAAAAGTCATTACATCTaGTTTCAGGCTGCTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: THDLSEVLGLQAPLSPCPKSHYI*FQAALS Trigger: GCTGAGAGCAGCCTGAAAGCAGATGTAATGACTTTT...AGGGCAAGGTGATAGTGGTGCCTGCAATCCCAGCACTTCAGAAAGATCATGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR CCA 90 bp | GGAAGGCCTTCCTCCTGTCTCTCACTTGAATGTCATACATCCTCACTCCACATGAACTCTTTAGCTGGTTaGTCTGAGCTTCTGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRPSSCLSLECHTSSLHMNSLAG*SELLFS Trigger: TGAGAACAGAAGCTCAGACCAACCAGCTAAAGAGTT...CATGTGGAGTGAGGATGTATGACATTCAAGTGAGAGACAGGAGGAAGGCCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR CCA 90 bp | CCCATCTTGGGCTGGAGAGAGAACTTACTTCCACTTCCAGAGGACCCAAGTGCAAGCCCCATTATGGTGTaGTCTATGTTTACCTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: PILGWRENLLPLPEDPSASPIMV*SMFTFI Trigger: AATAAAGGTAAACATAGACCACACCATAATGGGGCT...TGCACTTGGGTCCTCTGGAAGTGGAAGTAAGTTCTCTCTCCAGCCCAAGATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR CCA 90 bp | ACTCATGATCTTTCTGAAGTGCTGGGATTGCAGGCACCACTATCACCTTGCCCTACATTTTTCAGGTTCTaGATCTCTGGTCTCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: THDLSEVLGLQAPLSPCPTFFRF*ISGLHQ Trigger: CTGATGGAGACCAGAGATCCAGAACCTGAAAAATGT...AGGGCAAGGTGATAGTGGTGCCTGCAATCCCAGCACTTCAGAAAGATCATGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR CCA 90 bp | GAATGGCTTTCAAGATACTCTGATAAGCCAGGTGCAGTAGGTGGAGCCAGAAGGGTATTTAGCCAGCTCTaGAACAGAAGCTATTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EWLSRYSDKPGAVGGARRVFSQL*NRSYFR Trigger: CCTGAAATAGCTTCTGTTCCAGAGCTGGCTAAATAC...CCTTCTGGCTCCACCTACTGCACCTGGCTTATCAGAGTATCTTGAAAGCCATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR TCA 90 bp | GAATGGCTTTCAAGATACTCTGATAAGCCAGGTGCAGTAGGTGGAGCCAGAAGGTGGTATTTCTTCAGTTaGACAGTTCTCTGGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: EWLSRYSDKPGAVGGARRWYFFS*TVLWNS Trigger: ACTGTTCCAGAGAACTGTTCAACTGAAGAAATACCA...CCTTCTGGCTCCACCTACTGCACCTGGCTTATCAGAGTATCTTGAAAGCCATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR TCA 90 bp | AATGGAGAAGTGCACCGGGGTACACTGTTATACTGCGATCTTTTCTTCAGAAGAGAAGTGCTGGTCTTCTaGTCAGGTCACCAAAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: NGEVHRGTLLYCDLFFRREVLVF*SGHQSM Trigger: CATACTTTGGTGACCTGATCAGAAGACCAGCACTTC...TCTTCTGAAGAAAAGATCGCAGTATAACAGTGTACCCCGGTGCACTTCTCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR GCA 90 bp | ACTCATGATCTTTCTGAAGTGCTGGGATTGCAGGCACCACTATCACCTTGCCCTTATGTGATTCTGCAGTaGCATTGGAATGACCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: THDLSEVLGLQAPLSPCPYVILQ*HWNDHL Trigger: AAGATGGTCATTCCAATGGCACTGCAGAATCACATA...AGGGCAAGGTGATAGTGGTGCCTGCAATCCCAGCACTTCAGAAAGATCATGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR GCA 90 bp | AATGGAGAAGTGCACCGGGGTACACTGTTATACTGCGATCTTTTCTTCAGAAGAGTTCCTGAAGACTCCTaGAACTCTTTAGCTGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NGEVHRGTLLYCDLFFRRVPEDS*NSLAGW Trigger: CCAACCAGCTAAAGAGTTGCAGGAGTCTTCAGGAAC...TCTTCTGAAGAAAAGATCGCAGTATAACAGTGTACCCCGGTGCACTTCTCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR CCA 90 bp | GGAAGGCCTTCCTCCTGTCTCTCACTTGAATGTCATACATCCTCACTCCACATGTCAACATCCAATTCATaGCTTCTCTTCACTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRPSSCLSLECHTSSLHMSTSNS*LLFTLL Trigger: CAGCAAAGTGAAGAGAAGCCATGAATTGGATGTTGA...CATGTGGAGTGAGGATGTATGACATTCAAGTGAGAGACAGGAGGAAGGCCTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR TCA 90 bp | GGAAGGCCTTCCTCCTGTCTCTCACTTGAATGTCATACATCCTCACTCCACATGTATTGCCACTGCTTTTaGCATAGTAGCCTTTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: GRPSSCLSLECHTSSLHMYCHCF*HSSLLI Trigger: GATTAAAAGGCTACTATGTCAAAAGCAGTGGCAATA...CATGTGGAGTGAGGATGTATGACATTCAAGTGAGAGACAGGAGGAAGGCCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR TCA 90 bp | GAATGGCTTTCAAGATACTCTGATAAGCCAGGTGCAGTAGGTGGAGCCAGAAGGCTCAAAATTCTCATGTaGAGACATTCTACCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: EWLSRYSDKPGAVGGARRLKILM*RHSTKL Trigger: CAGTTTGGTAGAATGTCTTCACATGAGAATTTTGAG...CCTTCTGGCTCCACCTACTGCACCTGGCTTATCAGAGTATCTTGAAAGCCATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR TCA 90 bp | ACTCATGATCTTTCTGAAGTGCTGGGATTGCAGGCACCACTATCACCTTGCCCTATTGTCATCAACTTCTaGATCTGGGTTTTCATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: THDLSEVLGLQAPLSPCPIVINF*IWVFIN Trigger: GTTGATGAAAACCCAGATTCAGAAGTTGATGACAAT...AGGGCAAGGTGATAGTGGTGCCTGCAATCCCAGCACTTCAGAAAGATCATGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR GCA 90 bp | ACTCATGATCTTTCTGAAGTGCTGGGATTGCAGGCACCACTATCACCTTGCCCTCTGTTCTACTTTCTCTaGACTCACAGTTATGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: THDLSEVLGLQAPLSPCPLFYFL*THSYVV Trigger: AACAACATAACTGTGAGTGCAGAGAAAGTAGAACAG...AGGGCAAGGTGATAGTGGTGCCTGCAATCCCAGCACTTCAGAAAGATCATGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR CCA 90 bp | AATGGAGAAGTGCACCGGGGTACACTGTTATACTGCGATCTTTTCTTCAGAAGATCCTCTTCTGTACCTTaGTCTCCTGCATTATTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NGEVHRGTLLYCDLFFRRSSSVP*SPALLP Trigger: TGGCAATAATGCAGGAGACCAAGGTACAGAAGAGGA...TCTTCTGAAGAAAAGATCGCAGTATAACAGTGTACCCCGGTGCACTTCTCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR CCA 90 bp | AATGGAGAAGTGCACCGGGGTACACTGTTATACTGCGATCTTTTCTTCAGAAGAGCCAAGGATGCCACCTaGTCAATATCAGCATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NGEVHRGTLLYCDLFFRRAKDAT*SISAFL Trigger: AAGAAATGCTGATATTGACCAGGTGGCATCCTTGGC...TCTTCTGAAGAAAAGATCGCAGTATAACAGTGTACCCCGGTGCACTTCTCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR TCA 90 bp | AATGGAGAAGTGCACCGGGGTACACTGTTATACTGCGATCTTTTCTTCAGAAGACAGTGGCTGAAGAGATaGTCTGACATTTTTCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NGEVHRGTLLYCDLFFRRQWLKR*SDIFQV Trigger: AACCTGAAAAATGTCAGATCATCTCTTCAGCCACTG...TCTTCTGAAGAAAAGATCGCAGTATAACAGTGTACCCCGGTGCACTTCTCCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR GCA 90 bp | TCTGAAGTGCTGGGATTGCAGGCACCACTATCACCTTGCCCTGATGCTGTTTTATTCTACTTCAGAACCTaGTTTGCTTTGAATTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SEVLGLQAPLSPCPDAVLFYFRT*FALNFT Trigger: TGTGAAATTCAAAGCAAAGCAGGTTCTGAAGTAGAA...TAAAACAGCATCAGGGCAAGGTGATAGTGGTGCCTGCAATCCCAGCACTTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR CCA 90 bp | TCTGAAGTGCTGGGATTGCAGGCACCACTATCACCTTGCCCTGATGCTGTTTTATCGATGGCTGAAATTTaGAATTCCACCATATTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SEVLGLQAPLSPCPDAVLSMAEI*NSTIFL Trigger: CAAAAATATGGTGGAATTCCAAATTTCAGCCATCGA...TAAAACAGCATCAGGGCAAGGTGATAGTGGTGCCTGCAATCCCAGCACTTCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR TCA 90 bp | AATGGAGAAGTGCACCGGGGTACACTGTTATACTGCGATCTTTTCTTCAGAAGAACCTTTATTTGTTCCTaGAGACTCCTGCAACTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NGEVHRGTLLYCDLFFRRTFICS*RLLQLF Trigger: AAAGAGTTGCAGGAGTCTTCAGGAACAAATAAAGGT...TCTTCTGAAGAAAAGATCGCAGTATAACAGTGTACCCCGGTGCACTTCTCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR GCA 90 bp | AATGTACAAAAGCCCAGTGGTGTAACTTCTAGAAACTTACCAACTGAAATACTTTCTGGATACTTCTCCTaGCAGCTTTGCCACAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NVQKPSGVTSRNLPTEILSGYFS*QLCHNS Trigger: GCTGTTGTGGCAAAGCTGGCAGGAGAAGTATCCAGA...AAGTATTTCAGTTGGTAAGTTTCTAGAAGTTACACCACTGGGCTTTTGTACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR GCA 90 bp | AATGTACAAAAGCCCAGTGGTGTAACTTCTAGAAACTTACCAACTGAAATACTTGGCTTCTCTTCACTTTaGTGGGCTTATGCTCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NVQKPSGVTSRNLPTEILGFSSL*WAYAQV Trigger: CACCTGAGCATAAGCCCAGCAAAGTGAAGAGAAGCC...AAGTATTTCAGTTGGTAAGTTTCTAGAAGTTACACCACTGGGCTTTTGTACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR CCA 90 bp | AATGTACAAAAGCCCAGTGGTGTAACTTCTAGAAACTTACCAACTGAAATACTTGGTCTTCAGAAGTGCTaGTCTTCTGATCAGGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: NVQKPSGVTSRNLPTEILGLQKC*SSDQVT Trigger: GGTGACCTGATCAGAAGACCAGCACTTCTGAAGACC...AAGTATTTCAGTTGGTAAGTTTCTAGAAGTTACACCACTGGGCTTTTGTACATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR GCA 90 bp | AATGTACAAAAGCCCAGTGGTGTAACTTCTAGAAACTTACCAACTGAAATACTTGTTCCTCTGAGTCACTaGTTGTGCAAGTGTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NVQKPSGVTSRNLPTEILVPLSH*LCKCLA Trigger: TGCAAGACACTTGCACAAGCAGTGACTCAGAGGAAC...AAGTATTTCAGTTGGTAAGTTTCTAGAAGTTACACCACTGGGCTTTTGTACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR TCA 90 bp | AATGTACAAAAGCCCAGTGGTGTAACTTCTAGAAACTTACCAACTGAAATACTTGTCCCATACTTCTCATaGGTTTGGCCTCAGAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: NVQKPSGVTSRNLPTEILVPYFS*VWPQNQ Trigger: TTGATTCTGAGGCCAAACTCATGAGAAGTATGGGAC...AAGTATTTCAGTTGGTAAGTTTCTAGAAGTTACACCACTGGGCTTTTGTACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR TCA 90 bp | AATGTACAAAAGCCCAGTGGTGTAACTTCTAGAAACTTACCAACTGAAATACTTGCTGAAGAGATGATCTaGCATTTTTCAGGTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NVQKPSGVTSRNLPTEILAEEMI*HFSGSG Trigger: TCCAGAACCTGAAAAATGTCAGATCATCTCTTCAGC...AAGTATTTCAGTTGGTAAGTTTCTAGAAGTTACACCACTGGGCTTTTGTACATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR GCA 90 bp | AATGTACAAAAGCCCAGTGGTGTAACTTCTAGAAACTTACCAACTGAAATACTTCTGAGTCACTGCTTGTaGAAGTGTCTTGCATTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NVQKPSGVTSRNLPTEILLSHCL*KCLAFC Trigger: ACAAAATGCAAGACACTTGCACAAGCAGTGACTCAG...AAGTATTTCAGTTGGTAAGTTTCTAGAAGTTACACCACTGGGCTTTTGTACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR TCA 90 bp | AATGTACAAAAGCCCAGTGGTGTAACTTCTAGAAACTTACCAACTGAAATACTTTTCAAGTTCAGTGGCTaGAGAGATGATCTGACATTT | + |
|
Preference number: 4 (lower is better) Translates to: NVQKPSGVTSRNLPTEILFKFSG*RDDLTF Trigger: AAATGTCAGATCATCTCTTCAGCCACTGAACTTGAA...AAGTATTTCAGTTGGTAAGTTTCTAGAAGTTACACCACTGGGCTTTTGTACATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR CCA 90 bp | AATGTACAAAAGCCCAGTGGTGTAACTTCTAGAAACTTACCAACTGAAATACTTACTTCTGTTTCTGCATaGGGAGAGTTTGGTATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NVQKPSGVTSRNLPTEILTSVSA*GEFGIS Trigger: AGAAATACCAAACTCTCCCCATGCAGAAACAGAAGT...AAGTATTTCAGTTGGTAAGTTTCTAGAAGTTACACCACTGGGCTTTTGTACATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR CCA 90 bp | AATGTACAAAAGCCCAGTGGTGTAACTTCTAGAAACTTACCAACTGAAATACTTTTAAGGCAAACTGAATaGTATTTCCTCCAACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NVQKPSGVTSRNLPTEILLRQTE*YFLQLH Trigger: GTGGAGTTGGAGGAAATACCATTCAGTTTGCCTTAA...AAGTATTTCAGTTGGTAAGTTTCTAGAAGTTACACCACTGGGCTTTTGTACATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR GCA 90 bp | AATGTACAAAAGCCCAGTGGTGTAACTTCTAGAAACTTACCAACTGAAATACTTCTTCAGAACCTGCTTTaGTTTGAATTTCACATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NVQKPSGVTSRNLPTEILLQNLL*FEFHMF Trigger: GAACATGTGAAATTCAAAGCAAAGCAGGTTCTGAAG...AAGTATTTCAGTTGGTAAGTTTCTAGAAGTTACACCACTGGGCTTTTGTACATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS TCA 90 bp | GGGAGCAGAGGCAAAGGATCTTGTACTCCTCCTCGCGGTCTTCAATaGAGAGCAGCATTTCGGCCACATGGTTCCACTTCTCGCAACACA | + |
|
Preference number: 5 (lower is better) Translates to: GSRGKGSCTPPRGLQ*RAAFRPHGSTSRNT Trigger: TGTGTTGCGAGAAGTGGAACCATGTGGCCGAAATGCTGCTCTTCATTGAAGACCGCGAGGAGGAGTACAAGATCCTTTGCCTCTGCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR CAA 90 bp | TCTGAAGTGCTGGGATTGCAGGCACCACTATCACCTTGCCCTGATGCTGTTTTACTTCTCCTGCCAGCTTaGCCACAACAGCCCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SEVLGLQAPLSPCPDAVLLLLPA*PQQPFS Trigger: GGAGAAGGGCTGTTGTGGCAAAGCTGGCAGGAGAAG...TAAAACAGCATCAGGGCAAGGTGATAGTGGTGCCTGCAATCCCAGCACTTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR CAA 90 bp | CCCATCTTGGGCTGGAGAGAGAACTTACTTCCACTTCCAGAGGACCCAAGTGCATGTCCTGAGCCATGCTaGAATCCTAGAAGGAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: PILGWRENLLPLPEDPSACPEPC*NPRRKP Trigger: TGGTTTCCTTCTAGGATTCAAGCATGGCTCAGGACA...TGCACTTGGGTCCTCTGGAAGTGGAAGTAAGTTCTCTCTCCAGCCCAAGATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR CAA 90 bp | TCTGAAGTGCTGGGATTGCAGGCACCACTATCACCTTGCCCTGATGCTGTTTTAGTGAACAGGATGTGCTaGCTCTTCACAGGCATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SEVLGLQAPLSPCPDAVLVNRMC*LFTGIC Trigger: GCAGATGCCTGTGAAGAGCAAGCACATCCTGTTCAC...TAAAACAGCATCAGGGCAAGGTGATAGTGGTGCCTGCAATCCCAGCACTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS TCA 90 bp | CCAACTCCACAGAAAGCATCTACTACAACGTCACATCTGAAGGCCTaGCTGACACGGCCAGCAATGTGTTCAGCAATCTTCTCAGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PTPQKASTTTSHLKA*LTRPAMCSAIFSGV Trigger: CACTCCTGAGAAGATTGCTGAACACATTGCTGGCCGTGTCAGTCAGGCCTTCAGATGTGACGTTGTAGTAGATGCTTTCTGTGGAGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS GCA 90 bp | AGGTTCCAAGGCTCAGAAGACAGTGTCTGGTCTGGATACTTCTCCTaGCAGCTTTGCCACAACAGCCCTTCTCCATATTCATTCCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RFQGSEDSVWSGYFS*QLCHNSPSPYSFQY Trigger: GTACTGGAATGAATATGGAGAAGGGCTGTTGTGGCAAAGCTGGCAGGAGAAGTATCCAGACCAGACACTGTCTTCTGAGCCTTGGAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS CCA 90 bp | ATCCAATTCATGGCTTCTCTTCACTTTGCTGGGCTTATGCTCAGGTaGGTCATCGTCACTCTCATGTCCATCAGCCCCATTATGGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: IQFMASLHFAGLMLR*VIVTLMSISPIMVW Trigger: CCACACCATAATGGGGCTGATGGACATGAGAGTGACGATGACCCACCTGAGCATAAGCCCAGCAAAGTGAAGAGAAGCCATGAATTGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR CAA 90 bp | TCTGAAGTGCTGGGATTGCAGGCACCACTATCACCTTGCCCTGATGCTGTTTTACTCCTCTTCTGTACCTaGGTCTCCTGCATTATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SEVLGLQAPLSPCPDAVLLLFCT*VSCIIA Trigger: GGCAATAATGCAGGAGACCAAGGTACAGAAGAGGAG...TAAAACAGCATCAGGGCAAGGTGATAGTGGTGCCTGCAATCCCAGCACTTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR CAA 90 bp | GAATGGCTTTCAAGATACTCTGATAAGCCAGGTGCAGTAGGTGGAGCCAGAAGGTGGCTTCTCTTCACTTaGCTGGGCTTATGCTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: EWLSRYSDKPGAVGGARRWLLFT*LGLCSG Trigger: ACCTGAGCATAAGCCCAGCAAAGTGAAGAGAAGCCA...CCTTCTGGCTCCACCTACTGCACCTGGCTTATCAGAGTATCTTGAAAGCCATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS-3UTR CAA 90 bp | GGAAGGCCTTCCTCCTGTCTCTCACTTGAATGTCATACATCCTCACTCCACATGCTGTTCTATTTCCACTaGTCCTCCAAGCCCAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GRPSSCLSLECHTSSLHMLFYFH*SSKPSQ Trigger: TTGGCTGGGCTTGGAGGACAAGTGGAAATAGAACAG...CATGTGGAGTGAGGATGTATGACATTCAAGTGAGAGACAGGAGGAAGGCCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS GCA 90 bp | GGCTCAGAAGACAGTGTCTGGTCTGGATACTTCTCCTGCCAGCTTTaGCACAACAGCCCTTCTCCATATTCATTCCAGTACTTTTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GSEDSVWSGYFSCQL*HNSPSPYSFQYFSQ Trigger: TTGGGAAAAGTACTGGAATGAATATGGAGAAGGGCTGTTGTGGCAAAGCTGGCAGGAGAAGTATCCAGACCAGACACTGTCTTCTGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS TCA 90 bp | TACCTTACTCCGTACTTTACTCTTACACACGACAAAAGGTTTCCCTaGGTCCTCGGTGAACAGGATGTGCTTGCTCTTCACAGGCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: YLTPYFTLTHDKRFP*VLGEQDVLALHRHL Trigger: CAGATGCCTGTGAAGAGCAAGCACATCCTGTTCACCGAGGACTCAGGGAAACCTTTTGTCGTGTGTAAGAGTAAAGTACGGAGTAAGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS GCA 90 bp | TCATCAACATCCAATTCATGGCTTCTCTTCACTTTGCTGGGCTTATaGTCAGGTGGGTCATCGTCACTCTCATGTCCATCAGCCCCATTA | + |
|
Preference number: 5 (lower is better) Translates to: SSTSNSWLLFTLLGL*SGGSSSLSCPSAPL Trigger: TAATGGGGCTGATGGACATGAGAGTGACGATGACCCACCTGAGCATAAGCCCAGCAAAGTGAAGAGAAGCCATGAATTGGATGTTGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
||
| CDS CCA 90 bp | TGCTCAGGTGGGTCATCGTCACTCTCATGTCCATCAGCCCCATTATaGTGTGGTCTATGTTTACCTTTATTTGTTCCTGAAGACTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSGGSSSLSCPSAPL*CGLCLPLFVPEDSC Trigger: GCAGGAGTCTTCAGGAACAAATAAAGGTAAACATAGACCACACCATAATGGGGCTGATGGACATGAGAGTGACGATGACCCACCTGAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR CAA 90 bp | GAATGGCTTTCAAGATACTCTGATAAGCCAGGTGCAGTAGGTGGAGCCAGAAGGCAAGGTCACTTTCATTaGGGCTATGTGATTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EWLSRYSDKPGAVGGARRQGHFH*GYVILQ Trigger: CTGCAGAATCACATAGCCCAAATGAAAGTGACCTTG...CCTTCTGGCTCCACCTACTGCACCTGGCTTATCAGAGTATCTTGAAAGCCATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR CAA 90 bp | ACTCATGATCTTTCTGAAGTGCTGGGATTGCAGGCACCACTATCACCTTGCCCTCTGCATGGGGAGAGTTaGGTATTTCTTCAGTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: THDLSEVLGLQAPLSPCPLHGES*VFLQLN Trigger: GTTCAACTGAAGAAATACCAAACTCTCCCCATGCAG...AGGGCAAGGTGATAGTGGTGCCTGCAATCCCAGCACTTCAGAAAGATCATGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS TCA 90 bp | ACTGACACGGCCAGCAATGTGTTCAGCAATCTTCTCAGGAGTGACTaGAAACCAGCCCTCTTTGTCCAATTTGATTCCATCATCAAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TDTASNVFSNLLRSD*KPALFVQFDSIIKA Trigger: CGCTTTGATGATGGAATCAAATTGGACAAAGAGGGCTGGTTTTCAGTCACTCCTGAGAAGATTGCTGAACACATTGCTGGCCGTGTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS GCA 90 bp | CCTCAGAATCAAGGTCACTTTCATTTGGGCTATGTGATTCTGCAGTaGCATTGGAATGACCATCTTCCTCCTCTTCTGTACCTTGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PQNQGHFHLGYVILQ*HWNDHLPPLLYLGL Trigger: GAGACCAAGGTACAGAAGAGGAGGAAGATGGTCATTCCAATGGCACTGCAGAATCACATAGCCCAAATGAAAGTGACCTTGATTCTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR CAA 90 bp | GAATGGCTTTCAAGATACTCTGATAAGCCAGGTGCAGTAGGTGGAGCCAGAAGGTGTGGTCATTATCATTaGAGCCAGGGATTTCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: EWLSRYSDKPGAVGGARRCGHYH*SQGFHP Trigger: AGGATGAAATCCCTGGCTCAAATGATAATGACCACA...CCTTCTGGCTCCACCTACTGCACCTGGCTTATCAGAGTATCTTGAAAGCCATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR CAA 90 bp | CCCATCTTGGGCTGGAGAGAGAACTTACTTCCACTTCCAGAGGACCCAAGTGCAGATATATCATTTTCTTaGGGTGTTCCATTACAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PILGWRENLLPLPEDPSADISFS*GVPLQE Trigger: CTCCTGTAATGGAACACCCAAAGAAAATGATATATC...TGCACTTGGGTCCTCTGGAAGTGGAAGTAAGTTCTCTCTCCAGCCCAAGATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS TCA 90 bp | AGGTCACTTTCATTTGGGCTATGTGATTCTGCAGTGCCATTGGAATaGCCATCTTCCTCCTCTTCTGTACCTTGGTCTCCTGCATTATTG | + |
|
Preference number: 5 (lower is better) Translates to: RSLSFGLCDSAVPLE*PSSSSSVPWSPALL Trigger: CAATAATGCAGGAGACCAAGGTACAGAAGAGGAGGAAGATGGTCATTCCAATGGCACTGCAGAATCACATAGCCCAAATGAAAGTGACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS CCA 90 bp | AATCAAGGTCACTTTCATTTGGGCTATGTGATTCTGCAGTGCCATTaGAATGACCATCTTCCTCCTCTTCTGTACCTTGGTCTCCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: NQGHFHLGYVILQCH*NDHLPPLLYLGLLH Trigger: ATGCAGGAGACCAAGGTACAGAAGAGGAGGAAGATGGTCATTCCAATGGCACTGCAGAATCACATAGCCCAAATGAAAGTGACCTTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS CCA 90 bp | TCCAATTTGATTCCATCATCAAAGCGAGAGAAGAGCCTGTATCTCTaGGCCCAGTATTTAGCCAGCTCTGGAACAGAAGCTATTTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SNLIPSSKREKSLYL*AQYLASSGTEAISG Trigger: ACCTGAAATAGCTTCTGTTCCAGAGCTGGCTAAATACTGGGCCCAGAGATACAGGCTCTTCTCTCGCTTTGATGATGGAATCAAATTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR CAA 90 bp | GAATGGCTTTCAAGATACTCTGATAAGCCAGGTGCAGTAGGTGGAGCCAGAAGGAAGCTGACTGTAATGTaGTTCCCATTCTTCCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: EWLSRYSDKPGAVGGARRKLTVM*FPFFLC Trigger: ACAAAGGAAGAATGGGAACAACATTACAGTCAGCTT...CCTTCTGGCTCCACCTACTGCACCTGGCTTATCAGAGTATCTTGAAAGCCATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR CAA 90 bp | GAATGGCTTTCAAGATACTCTGATAAGCCAGGTGCAGTAGGTGGAGCCAGAAGGGCTTGTGCAAGTGTCTaGCATTTTGTTTTGAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: EWLSRYSDKPGAVGGARRACASV*HFVLRK Trigger: CTTTCTCAAAACAAAATGCAAGACACTTGCACAAGC...CCTTCTGGCTCCACCTACTGCACCTGGCTTATCAGAGTATCTTGAAAGCCATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR CAA 90 bp | AATGGAGAAGTGCACCGGGGTACACTGTTATACTGCGATCTTTTCTTCAGAAGACCTCTGAGTCACTGCTaGTGCAAGTGTCTTGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: NGEVHRGTLLYCDLFFRRPLSHC*CKCLAF Trigger: AAATGCAAGACACTTGCACAAGCAGTGACTCAGAGG...TCTTCTGAAGAAAAGATCGCAGTATAACAGTGTACCCCGGTGCACTTCTCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS TCA 90 bp | CTCCATCAGGTTGTCAGCTTTCTCCAAGGACATGTCTTGTTCCTCTaGGTCACTGCTTGTGCAAGTGTCTTGCATTTTGTTTTGAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LHQVVSFLQGHVLFL*VTACASVLHFVLRK Trigger: CTTTCTCAAAACAAAATGCAAGACACTTGCACAAGCAGTGACTCAGAGGAACAAGACATGTCCTTGGAGAAAGCTGACAACCTGATGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR CAA 90 bp | TCTGAAGTGCTGGGATTGCAGGCACCACTATCACCTTGCCCTGATGCTGTTTTAGCAGATCCAGGTACTTaGATTTGTATTTCACATTCT | + |
|
Preference number: 5 (lower is better) Translates to: SEVLGLQAPLSPCPDAVLADPGT*ICISHS Trigger: AGAATGTGAAATACAAATCAAAGTACCTGGATCTGC...TAAAACAGCATCAGGGCAAGGTGATAGTGGTGCCTGCAATCCCAGCACTTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS TCA 90 bp | ACTTCACTCTTTTCTGCTTCAAGTTCAGTGGCTGAAGAGATGATCTaGCATTTTTCAGGTTCTGGATCTCTGGTCTCCATCAGGTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TSLFSASSSVAEEMI*HFSGSGSLVSIRLS Trigger: TGACAACCTGATGGAGACCAGAGATCCAGAACCTGAAAAATGTCAGATCATCTCTTCAGCCACTGAACTTGAAGCAGAAAAGAGTGAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS TCA 90 bp | GGGTCGATATCAATAGCAATCACTCTTTTCCCGGTTAAGGCAAACTaGATGGTATTTCCTCCAACTCCACAGAAAGCATCTACTACAACG | + |
|
Preference number: 5 (lower is better) Translates to: GSISIAITLFPVKAN*MVFPPTPQKASTTT Trigger: CGTTGTAGTAGATGCTTTCTGTGGAGTTGGAGGAAATACCATTCAGTTTGCCTTAACCGGGAAAAGAGTGATTGCTATTGATATCGACCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS GCA 90 bp | CAGCTTTCTCCAAGGACATGTCTTGTTCCTCTGAGTCACTGCTTGTaGAAGTGTCTTGCATTTTGTTTTGAGAAAGAGAATCCTGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: QLSPRTCLVPLSHCL*KCLAFCFEKENPVM Trigger: CATCACAGGATTCTCTTTCTCAAAACAAAATGCAAGACACTTGCACAAGCAGTGACTCAGAGGAACAAGACATGTCCTTGGAGAAAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR CAA 90 bp | AATGTACAAAAGCCCAGTGGTGTAACTTCTAGAAACTTACCAACTGAAATACTTGTTCCCATTCTTCCTTaGTATCAGGGAGGTTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: NVQKPSGVTSRNLPTEILVPILP*YQGGSK Trigger: CTTGGAACCTCCCTGATACAAAGGAAGAATGGGAAC...AAGTATTTCAGTTGGTAAGTTTCTAGAAGTTACACCACTGGGCTTTTGTACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS GCA 90 bp | CCAGTGTATTTTCAACAGGAAGGTTTTCTACTTCAGAACCTGCTTTaGTTTGAATTTCACATGTTCTGTTGTTCTCACAGTGTTCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: PVYFQQEGFLLQNLL*FEFHMFCCSHSVQL Trigger: CAGTTGAACACTGTGAGAACAACAGAACATGTGAAATTCAAAGCAAAGCAGGTTCTGAAGTAGAAAACCTTCCTGTTGAAAATACACTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS CCA 90 bp | TTTGATTTGTATTTCACATTCTTCTCTAGATACCTGACCTGTCGATaGCTGAAATTTGGAATTCCACCATATTTTTGTCCTGAGCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: FDLYFTFFSRYLTCR*LKFGIPPYFCPEPC Trigger: GCATGGCTCAGGACAAAAATATGGTGGAATTCCAAATTTCAGCCATCGACAGGTCAGGTATCTAGAGAAGAATGTGAAATACAAATCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS TCA 90 bp | TTCATAGACATCTCAAAATTCTCATGTGAAGACATTCTACCAAACTaGATTGGTAGTCCCATACTTCTCATGAGTTTGGCCTCAGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: FIDISKFSCEDILPN*IGSPILLMSLASES Trigger: TGATTCTGAGGCCAAACTCATGAGAAGTATGGGACTACCAATTCAGTTTGGTAGAATGTCTTCACATGAGAATTTTGAGATGTCTATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR CAA 90 bp | AATGTACAAAAGCCCAGTGGTGTAACTTCTAGAAACTTACCAACTGAAATACTTATACTTCTCATGAGTTaGGCCTCAGAATCAAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: NVQKPSGVTSRNLPTEILILLMS*ASESRS Trigger: TGACCTTGATTCTGAGGCCAAACTCATGAGAAGTAT...AAGTATTTCAGTTGGTAAGTTTCTAGAAGTTACACCACTGGGCTTTTGTACATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS-3UTR CAA 90 bp | AATGTACAAAAGCCCAGTGGTGTAACTTCTAGAAACTTACCAACTGAAATACTTCCTAGAAGGAAACCATaGTCATCAACTTCTGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: NVQKPSGVTSRNLPTEILPRRKP*SSTSES Trigger: AGATTCAGAAGTTGATGACAATGGTTTCCTTCTAGG...AAGTATTTCAGTTGGTAAGTTTCTAGAAGTTACACCACTGGGCTTTTGTACATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS CAA 72 bp | TCTTCCACAAATGCCCGGGAGCAGAGGCAAAGGATCTaGTACTCCTCCTCGCGGTCTTCAATGAAGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSTNAREQRQRI*YSSSRSSMKSS Trigger: GCTGCTCTTCATTGAAGACCGCGAGGAGGAGTACAAGATCCTTTGCCTCTGCTCCCGGGCATTTGTGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS GCA 72 bp | ACAAAAGGTTTCCCTGAGTCCTCGGTGAACAGGATGTaGTTGCTCTTCACAGGCATCTGCTTGCGCAGATCC | + |
|
Preference number: 6 (lower is better) Translates to: TKGFPESSVNRM*LLFTGICLRRS Trigger: GGATCTGCGCAAGCAGATGCCTGTGAAGAGCAAGCACATCCTGTTCACCGAGGACTCAGGGAAACCTTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS CAA 90 bp | AATTTTCGATCTTCCACAAATGCCCGGGAGCAGAGGCAAAGGATCTaGTACTCCTCCTCGCGGTCTTCAATGAAGAGCAGCATTTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: NFRSSTNAREQRQRI*YSSSRSSMKSSISA Trigger: GGCCGAAATGCTGCTCTTCATTGAAGACCGCGAGGAGGAGTACAAGATCCTTTGCCTCTGCTCCCGGGCATTTGTGGAAGATCGAAAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS CCA 72 bp | ATGGCTTCTCTTCACTTTGCTGGGCTTATGCTCAGGTaGGTCATCGTCACTCTCATGTCCATCAGCCCCATT | + |
|
Preference number: 6 (lower is better) Translates to: MASLHFAGLMLR*VIVTLMSISPI Trigger: AATGGGGCTGATGGACATGAGAGTGACGATGACCCACCTGAGCATAAGCCCAGCAAAGTGAAGAGAAGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS TCA 72 bp | TCTTACACACGACAAAAGGTTTCCCTGAGTCCTCGGTaGACAGGATGTGCTTGCTCTTCACAGGCATCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SYTRQKVSLSPR*TGCACSSQASA Trigger: AGCAGATGCCTGTGAAGAGCAAGCACATCCTGTTCACCGAGGACTCAGGGAAACCTTTTGTCGTGTGTAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS CAA 90 bp | AGGCTCAGAAGACAGTGTCTGGTCTGGATACTTCTCCTGCCAGCTTaGCCACAACAGCCCTTCTCCATATTCATTCCAGTACTTTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RLRRQCLVWILLLPA*PQQPFSIFIPVLFP Trigger: TGGGAAAAGTACTGGAATGAATATGGAGAAGGGCTGTTGTGGCAAAGCTGGCAGGAGAAGTATCCAGACCAGACACTGTCTTCTGAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS TCA 72 bp | CAGAAAGCATCTACTACAACGTCACATCTGAAGGCCTaGCTGACACGGCCAGCAATGTGTTCAGCAATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QKASTTTSHLKA*LTRPAMCSAIF Trigger: GAAGATTGCTGAACACATTGCTGGCCGTGTCAGTCAGGCCTTCAGATGTGACGTTGTAGTAGATGCTTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS GCA 72 bp | TCACACTTCCGCTTCAGAAGTGCTGGTCTTCAGAAGTaGTGGTCTTCTGATCAGGTCACCAAAGTATGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SHFRFRSAGLQK*WSSDQVTKVCS Trigger: ACTGCATACTTTGGTGACCTGATCAGAAGACCAGCACTTCTGAAGACCAGCACTTCTGAAGCGGAAGTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS CCA 72 bp | ATTCCATCATCAAAGCGAGAGAAGAGCCTGTATCTCTaGGCCCAGTATTTAGCCAGCTCTGGAACAGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: IPSSKREKSLYL*AQYLASSGTEA Trigger: AGCTTCTGTTCCAGAGCTGGCTAAATACTGGGCCCAGAGATACAGGCTCTTCTCTCGCTTTGATGATGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS CCA 72 bp | CACTTCCGCTTCAGAAGTGCTGGTCTTCAGAAGTGCTaGTCTTCTGATCAGGTCACCAAAGTATGCAGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: HFRFRSAGLQKC*SSDQVTKVCSD Trigger: ATCACTGCATACTTTGGTGACCTGATCAGAAGACCAGCACTTCTGAAGACCAGCACTTCTGAAGCGGAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS CAA 90 bp | TTAGCTGGTTGGTCTGAGCTTCTGTTCTCAGATATATCATTTTCTTaGGGTGTTCCATTACAGGAGTCACTTCCTCCAGAGGCAGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LAGWSELLFSDISFS*GVPLQESLPPEAGH Trigger: GTGCCCTGCCTCTGGAGGAAGTGACTCCTGTAATGGAACACCCAAAGAAAATGATATATCTGAGAACAGAAGCTCAGACCAACCAGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS TCA 72 bp | TCATTTGGGCTATGTGATTCTGCAGTGCCATTGGAATaGCCATCTTCCTCCTCTTCTGTACCTTGGTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SFGLCDSAVPLE*PSSSSSVPWSP Trigger: AGGAGACCAAGGTACAGAAGAGGAGGAAGATGGTCATTCCAATGGCACTGCAGAATCACATAGCCCAAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS TCA 72 bp | TTCCCAGTGATTTCACTGAGCGGCTCGTCACAGTGTTaGGAGGAATCTAACTGGCTCTGTTCTACTTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: FPVISLSGSSQC*EESNWLCSTFS Trigger: AGAGAAAGTAGAACAGAGCCAGTTAGATTCCTCTCAACACTGTGACGAGCCGCTCAGTGAAATCACTGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS GCA 72 bp | TCGGTGAACAGGATGTGCTTGCTCTTCACAGGCATCTaGTTGCGCAGATCCAGGTACTTTGATTTGTATTTC | + |
|
Preference number: 6 (lower is better) Translates to: SVNRMCLLFTGI*LRRSRYFDLYF Trigger: GAAATACAAATCAAAGTACCTGGATCTGCGCAAGCAGATGCCTGTGAAGAGCAAGCACATCCTGTTCACCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS CCA 72 bp | CATCAACATCCAATTCATGGCTTCTCTTCACTTTGCTaGGCTTATGCTCAGGTGGGTCATCGTCACTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: HQHPIHGFSSLC*AYAQVGHRHSH Trigger: ATGAGAGTGACGATGACCCACCTGAGCATAAGCCCAGCAAAGTGAAGAGAAGCCATGAATTGGATGTTGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS CAA 90 bp | TTCTGCAGTGCCATTGGAATGACCATCTTCCTCCTCTTCTGTACCTaGGTCTCCTGCATTATTGCCACTGCTTTTGACATAGTAGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: FCSAIGMTIFLLFCT*VSCIIATAFDIVAF Trigger: AAAGGCTACTATGTCAAAAGCAGTGGCAATAATGCAGGAGACCAAGGTACAGAAGAGGAGGAAGATGGTCATTCCAATGGCACTGCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS CAA 90 bp | TTGCTCTTCACAGGCATCTGCTTGCGCAGATCCAGGTACTTTGATTaGTATTTCACATTCTTCTCTAGATACCTGACCTGTCGATGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLFTGICLRRSRYFD*YFTFFSRYLTCRWL Trigger: CAGCCATCGACAGGTCAGGTATCTAGAGAAGAATGTGAAATACAAATCAAAGTACCTGGATCTGCGCAAGCAGATGCCTGTGAAGAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS CCA 72 bp | CACTTTCATTTGGGCTATGTGATTCTGCAGTGCCATTaGAATGACCATCTTCCTCCTCTTCTGTACCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: HFHLGYVILQCH*NDHLPPLLYLG Trigger: ACCAAGGTACAGAAGAGGAGGAAGATGGTCATTCCAATGGCACTGCAGAATCACATAGCCCAAATGAAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS CAA 72 bp | GTGAACAGGATGTGCTTGCTCTTCACAGGCATCTGCTaGCGCAGATCCAGGTACTTTGATTTGTATTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: VNRMCLLFTGIC*RRSRYFDLYFT Trigger: TGTGAAATACAAATCAAAGTACCTGGATCTGCGCAAGCAGATGCCTGTGAAGAGCAAGCACATCCTGTTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS CAA 72 bp | CATTTTTCAGGTTCTGGATCTCTGGTCTCCATCAGGTaGTCAGCTTTCTCCAAGGACATGTCTTGTTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: HFSGSGSLVSIR*SAFSKDMSCSS Trigger: AGAGGAACAAGACATGTCCTTGGAGAAAGCTGACAACCTGATGGAGACCAGAGATCCAGAACCTGAAAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS TCA 72 bp | GTTGTCAGCTTTCTCCAAGGACATGTCTTGTTCCTCTaGGTCACTGCTTGTGCAAGTGTCTTGCATTTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: VVSFLQGHVLFL*VTACASVLHFV Trigger: AACAAAATGCAAGACACTTGCACAAGCAGTGACTCAGAGGAACAAGACATGTCCTTGGAGAAAGCTGACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS GCA 72 bp | ATGACCATCTTCCTCCTCTTCTGTACCTTGGTCTCCTaGATTATTGCCACTGCTTTTGACATAGTAGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: MTIFLLFCTLVS*IIATAFDIVAF Trigger: AAAGGCTACTATGTCAAAAGCAGTGGCAATAATGCAGGAGACCAAGGTACAGAAGAGGAGGAAGATGGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS CCA 72 bp | GGGTCATCGTCACTCTCATGTCCATCAGCCCCATTATaGTGTGGTCTATGTTTACCTTTATTTGTTCCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: GSSSLSCPSAPL*CGLCLPLFVPE Trigger: TTCAGGAACAAATAAAGGTAAACATAGACCACACCATAATGGGGCTGATGGACATGAGAGTGACGATGACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS CAA 90 bp | GGGGAGAGTTTGGTATTTCTTCAGTTGAACAGTTCTCTGGAACAGTaGCTACTAAGGAGCCTACTTCACTCTTTTCTGCTTCAAGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: GESLVFLQLNSSLEQ*LLRSLLHSFLLQVQ Trigger: CTGAACTTGAAGCAGAAAAGAGTGAAGTAGGCTCCTTAGTAGCAACTGTTCCAGAGAACTGTTCAACTGAAGAAATACCAAACTCTCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS TCA 72 bp | TTTTCTGCTTCAAGTTCAGTGGCTGAAGAGATGATCTaGCATTTTTCAGGTTCTGGATCTCTGGTCTCCATC | + |
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Preference number: 6 (lower is better) Translates to: FSASSSVAEEMI*HFSGSGSLVSI Trigger: GATGGAGACCAGAGATCCAGAACCTGAAAAATGTCAGATCATCTCTTCAGCCACTGAACTTGAAGCAGAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS TCA 72 bp | GCCTACTTCACTCTTTTCTGCTTCAAGTTCAGTGGCTaGAGAGATGATCTGACATTTTTCAGGTTCTGGATC | + |
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Preference number: 6 (lower is better) Translates to: AYFTLFCFKFSG*RDDLTFFRFWI Trigger: GATCCAGAACCTGAAAAATGTCAGATCATCTCTTCAGCCACTGAACTTGAAGCAGAAAAGAGTGAAGTAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS GCA 72 bp | GTGAAGATGAAAAAGTCATTACATCTGCTTTCAGGCTaGTCTCAGCATTCTGGTCTACTTCTGTGTGAGATG | + |
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Preference number: 6 (lower is better) Translates to: VKMKKSLHLLSG*SQHSGLLLCEM Trigger: CATCTCACACAGAAGTAGACCAGAATGCTGAGAGCAGCCTGAAAGCAGATGTAATGACTTTTTCATCTTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS GCA 72 bp | GGTCTATGTTTACCTTTATTTGTTCCTGAAGACTCCTaGAACTCTTTAGCTGGTTGGTCTGAGCTTCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: GLCLPLFVPEDS*NSLAGWSELLF Trigger: GAACAGAAGCTCAGACCAACCAGCTAAAGAGTTGCAGGAGTCTTCAGGAACAAATAAAGGTAAACATAGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS TCA 72 bp | TCAATAGCAATCACTCTTTTCCCGGTTAAGGCAAACTaGATGGTATTTCCTCCAACTCCACAGAAAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: SIAITLFPVKAN*MVFPPTPQKAS Trigger: AGATGCTTTCTGTGGAGTTGGAGGAAATACCATTCAGTTTGCCTTAACCGGGAAAAGAGTGATTGCTATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS CAA 90 bp | GGTCTTCTGATCAGGTCACCAAAGTATGCAGTGATGGTCTTTAACTaGTTGTTAAGAAAGTTCTGTTCTATTTCCACTTGTCCTCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: GLLIRSPKYAVMVFN*LLRKFCSISTCPPS Trigger: GCTTGGAGGACAAGTGGAAATAGAACAGAACTTTCTTAACAACAAGTTAAAGACCATCACTGCATACTTTGGTGACCTGATCAGAAGACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS CCA 72 bp | TTTGTTCCTGAAGACTCCTGCAACTCTTTAGCTGGTTaGTCTGAGCTTCTGTTCTCAGATATATCATTTTCT | + |
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Preference number: 6 (lower is better) Translates to: FVPEDSCNSLAG*SELLFSDISFS Trigger: AGAAAATGATATATCTGAGAACAGAAGCTCAGACCAACCAGCTAAAGAGTTGCAGGAGTCTTCAGGAACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS CAA 90 bp | CCATATTTTTGTCCTGAGCCATGCTTGAATCCTAGAAGGAAACCATaGTCATCAACTTCTGAATCTGGGTTTTCATCAACATCCAATTCA | + |
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Preference number: 6 (lower is better) Translates to: PYFCPEPCLNPRRKP*SSTSESGFSSTSNS Trigger: TGAATTGGATGTTGATGAAAACCCAGATTCAGAAGTTGATGACAATGGTTTCCTTCTAGGATTCAAGCATGGCTCAGGACAAAAATATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS TCA 72 bp | ATCTCAAAATTCTCATGTGAAGACATTCTACCAAACTaGATTGGTAGTCCCATACTTCTCATGAGTTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: ISKFSCEDILPN*IGSPILLMSLA Trigger: GGCCAAACTCATGAGAAGTATGGGACTACCAATTCAGTTTGGTAGAATGTCTTCACATGAGAATTTTGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS CAA 72 bp | TTTGGAATTCCACCATATTTTTGTCCTGAGCCATGCTaGAATCCTAGAAGGAAACCATTGTCATCAACTTCT | + |
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Preference number: 6 (lower is better) Translates to: FGIPPYFCPEPC*NPRRKPLSSTS Trigger: AGAAGTTGATGACAATGGTTTCCTTCTAGGATTCAAGCATGGCTCAGGACAAAAATATGGTGGAATTCCAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS TCA 72 bp | AGTGTCTTGCATTTTGTTTTGAGAAAGAGAATCCTGTaGTGTCTCCTCATCTACTCGTTCATTAACCCATTT | + |
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Preference number: 6 (lower is better) Translates to: SVLHFVLRKRIL*CLLIYSFINPF Trigger: AAATGGGTTAATGAACGAGTAGATGAGGAGACATCACAGGATTCTCTTTCTCAAAACAAAATGCAAGACACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS CAA 90 bp | TTCTCTGCACTCACAGTTATGTTGTTAATCGCAGTAATAATTTCATaGTGGTCATTATCATTTGAGCCAGGGATTTCATCCTCAACTATA | + |
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Preference number: 6 (lower is better) Translates to: FSALTVMLLIAVIIS*WSLSFEPGISSSTI Trigger: TATAGTTGAGGATGAAATCCCTGGCTCAAATGATAATGACCACAATGAAATTATTACTGCGATTAACAACATAACTGTGAGTGCAGAGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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| CDS CAA 72 bp | TGGCTCTGTTCTACTTTCTCTGCACTCACAGTTATGTaGTTAATCGCAGTAATAATTTCATTGTGGTCATTA | + |
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Preference number: 6 (lower is better) Translates to: WLCSTFSALTVM*LIAVIISLWSL Trigger: TAATGACCACAATGAAATTATTACTGCGATTAACAACATAACTGTGAGTGCAGAGAAAGTAGAACAGAGCCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052712.6 |
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