Pregenerated sensors for TGM7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079103Ensembl transcript IDs: ENSMUST00000110675.3, ENSMUST00000238428.2
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AAGCACTCCAGACGTTCTCAGGTCGGGTCTGGGCGAGGAAGAAAGTaGCTCGGGTCCCCAGAAGCTCTGTGGGCTCTGGTCCTGTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: KHSRRSQVGSGRGRK*LGSPEALWALVLSQ Trigger: CTGAGACAGGACCAGAGCCCACAGAGCTTCTGGGGACCCGAGCCACTTTCTTCCTCGCCCAGACCCGACCTGAGAACGTCTGGAGTGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS GCA 90 bp | TCTCCAGAACGGTTTCCGAGTTCCACCCCCATGCAGGAGGGCCTGTaGACAAAAGCGCACCGTCAGTCCGACAGAGCCCTGAACATGGTC | + |
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Preference number: 5 (lower is better) Translates to: SPERFPSSTPMQEGL*TKAHRQSDRALNMV Trigger: GACCATGTTCAGGGCTCTGTCGGACTGACGGTGCGCTTTTGTGCACAGGCCCTCCTGCATGGGGGTGGAACTCGGAAACCGTTCTGGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS CCA 90 bp | TCTCTGACTGGCACCCTCTGGACATATAGCATGAGCGGCAGGTCCTaGCCCCACATGGGTGCCCTAACCAGGTGGAGTTGCAGCCTCACA | + |
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Preference number: 5 (lower is better) Translates to: SLTGTLWTYSMSGRS*PHMGALTRWSCSLT Trigger: TGTGAGGCTGCAACTCCACCTGGTTAGGGCACCCATGTGGGGCCAGGACCTGCCGCTCATGCTATATGTCCAGAGGGTGCCAGTCAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS GCA 90 bp | AGCGGCAGGTCCTGGCCCCACATGGGTGCCCTAACCAGGTGGAGTTaGAGCCTCACAGGCTTAGCCTTTAAGTTCTCAGACCCTAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: SGRSWPHMGALTRWS*SLTGLAFKFSDPRR Trigger: TCTCCTAGGGTCTGAGAACTTAAAGGCTAAGCCTGTGAGGCTGCAACTCCACCTGGTTAGGGCACCCATGTGGGGCCAGGACCTGCCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS CCA 90 bp | AGCATGAGCGGCAGGTCCTGGCCCCACATGGGTGCCCTAACCAGGTaGAGTTGCAGCCTCACAGGCTTAGCCTTTAAGTTCTCAGACCCT | + |
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Preference number: 5 (lower is better) Translates to: SMSGRSWPHMGALTR*SCSLTGLAFKFSDP Trigger: AGGGTCTGAGAACTTAAAGGCTAAGCCTGTGAGGCTGCAACTCCACCTGGTTAGGGCACCCATGTGGGGCCAGGACCTGCCGCTCATGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS TCA 90 bp | AGGAGGGCCTGTGCACAAAAGCGCACCGTCAGTCCGACAGAGCCCTaGACATGGTCTCTGACTGGCACCCTCTGGACATATAGCATGAGC | + |
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Preference number: 5 (lower is better) Translates to: RRACAQKRTVSPTEP*TWSLTGTLWTYSMS Trigger: GCTCATGCTATATGTCCAGAGGGTGCCAGTCAGAGACCATGTTCAGGGCTCTGTCGGACTGACGGTGCGCTTTTGTGCACAGGCCCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS CCA 90 bp | TCAATCATGAAGTCAGAAGCACTCCAGACGTTCTCAGGTCGGGTCTaGGCGAGGAAGAAAGTGGCTCGGGTCCCCAGAAGCTCTGTGGGC | + |
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Preference number: 5 (lower is better) Translates to: SIMKSEALQTFSGRV*ARKKVARVPRSSVG Trigger: GCCCACAGAGCTTCTGGGGACCCGAGCCACTTTCTTCCTCGCCCAGACCCGACCTGAGAACGTCTGGAGTGCTTCTGACTTCATGATTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS GCA 90 bp | CAGCCACACGGATCAGCCTTTCATCTGTCAGCTTGTCCCTGTAACTaGTGTAGGGCAGCAGGAACGGCCACTGTAGCTCCTTCTCAAAAT | + |
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Preference number: 5 (lower is better) Translates to: QPHGSAFHLSACPCN*CRAAGTATVAPSQN Trigger: ATTTTGAGAAGGAGCTACAGTGGCCGTTCCTGCTGCCCTACAGCAGTTACAGGGACAAGCTGACAGATGAAAGGCTGATCCGTGTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS GCA 90 bp | AAGTGGGGAGGCTCCAGAGAGAAATCTTTTAGGACCAGAATGAACTaGCCTGTCTCTTCAACCTCAGCGATGCCAGCCACACGGATCAGC | + |
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Preference number: 5 (lower is better) Translates to: KWGGSREKSFRTRMN*PVSSTSAMPATRIS Trigger: GCTGATCCGTGTGGCTGGCATCGCTGAGGTTGAAGAGACAGGGCAGTTCATTCTGGTCCTAAAAGATTTCTCTCTGGAGCCTCCCCACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS CCA 90 bp | GTGCAGTTATTCAGAGGCACCATCAGGGTGTTGGTGAGGGTGATGTaGATATCCAGAGCCTTGCCCACCTCAGCCCTTTCAAACACCTCA | + |
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Preference number: 5 (lower is better) Translates to: VQLFRGTIRVLVRVM*ISRALPTSALSNTS Trigger: TGAGGTGTTTGAAAGGGCTGAGGTGGGCAAGGCTCTGGATATCCACATCACCCTCACCAACACCCTGATGGTGCCTCTGAATAACTGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS TCA 90 bp | AGAAGCTCTGTGGGCTCTGGTCCTGTCTCAGCCACAAAGGTGAGATaGTCCTTTTGGGGCTGGAAGGGTCGACTGAAGACTATCGTTAAG | + |
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Preference number: 5 (lower is better) Translates to: RSSVGSGPVSATKVR*SFWGWKGRLKTIVK Trigger: CTTAACGATAGTCTTCAGTCGACCCTTCCAGCCCCAAAAGGATCATCTCACCTTTGTGGCTGAGACAGGACCAGAGCCCACAGAGCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS GCA 90 bp | GTGGAAGTTCCAGATTTTGTCTGGCCTCTGAGCCGTCAGCATTTCTaGGGTTCGATCATAGTAGGTGTCGATGGTCAAGTTTCCATCTGT | + |
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Preference number: 5 (lower is better) Translates to: VEVPDFVWPLSRQHF*GSIIVGVDGQVSIC Trigger: ACAGATGGAAACTTGACCATCGACACCTACTATGATCGAACCGCAGAAATGCTGACGGCTCAGAGGCCAGACAAAATCTGGAACTTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS GCA 90 bp | AGCGTTCCTTCTCGGTTCCAGCAATTTCCAGGAAGCCTTAATGAATaGAGACCGCTCCTCAGAGGATCCTTCTGGATACTTGTAGGAACT | + |
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Preference number: 5 (lower is better) Translates to: SVPSRFQQFPGSLNE*RPLLRGSFWILVGT Trigger: AGTTCCTACAAGTATCCAGAAGGATCCTCTGAGGAGCGGTCTGCATTCATTAAGGCTTCCTGGAAATTGCTGGAACCGAGAAGGAACGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS CCA 90 bp | TGTCGATGGTCAAGTTTCCATCTGTGTTGTGTGCAGAATGGAAATTaGAAACGACTCGGGTTGGAACACCTAAGCATCTCATTACCGTGC | + |
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Preference number: 5 (lower is better) Translates to: CRWSSFHLCCVQNGN*KRLGLEHLSISLPC Trigger: GCACGGTAATGAGATGCTTAGGTGTTCCAACCCGAGTCGTTTCCAATTTCCATTCTGCACACAACACAGATGGAAACTTGACCATCGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS CCA 90 bp | CCACCCTGCACACATACACCACGTTGTTTCTCTGAGAGTGGTCTTTaGATGGGTTCTTTAGAAAATAGAGGCTCTTGTTCAGGATCTCAA | + |
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Preference number: 5 (lower is better) Translates to: PPCTHTPRCFSESGL*MGSLENRGSCSGSQ Trigger: TTGAGATCCTGAACAAGAGCCTCTATTTTCTAAAGAACCCATCCAAAGACCACTCTCAGAGAAACAACGTGGTGTATGTGTGCAGGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS GCA 72 bp | CGGTTTCCGAGTTCCACCCCCATGCAGGAGGGCCTGTaGACAAAAGCGCACCGTCAGTCCGACAGAGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: RFPSSTPMQEGL*TKAHRQSDRAL Trigger: CAGGGCTCTGTCGGACTGACGGTGCGCTTTTGTGCACAGGCCCTCCTGCATGGGGGTGGAACTCGGAAACCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS CCA 72 bp | AGACGTTCTCAGGTCGGGTCTGGGCGAGGAAGAAAGTaGCTCGGGTCCCCAGAAGCTCTGTGGGCTCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: RRSQVGSGRGRK*LGSPEALWALV Trigger: GACCAGAGCCCACAGAGCTTCTGGGGACCCGAGCCACTTTCTTCCTCGCCCAGACCCGACCTGAGAACGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS CCA 72 bp | GGCACCCTCTGGACATATAGCATGAGCGGCAGGTCCTaGCCCCACATGGGTGCCCTAACCAGGTGGAGTTGC | + |
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Preference number: 6 (lower is better) Translates to: GTLWTYSMSGRS*PHMGALTRWSC Trigger: GCAACTCCACCTGGTTAGGGCACCCATGTGGGGCCAGGACCTGCCGCTCATGCTATATGTCCAGAGGGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS GCA 72 bp | GAAGCAAAGACCCAACACTGTCCATATTTCACAGGCTaGCCGCCCTTGGCCGACCACTGCCGCAAGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: EAKTQHCPYFTG*PPLADHCRKMA Trigger: GGCCATCTTGCGGCAGTGGTCGGCCAAGGGCGGGCAGCCTGTGAAATATGGACAGTGTTGGGTCTTTGCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS CCA 72 bp | AAGTCAGAAGCACTCCAGACGTTCTCAGGTCGGGTCTaGGCGAGGAAGAAAGTGGCTCGGGTCCCCAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: KSEALQTFSGRV*ARKKVARVPRS Trigger: GCTTCTGGGGACCCGAGCCACTTTCTTCCTCGCCCAGACCCGACCTGAGAACGTCTGGAGTGCTTCTGACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS CAA 90 bp | CCCTCCAGAACCATGGTGCAGTTATTCAGAGGCACCATCAGGGTGTaGGTGAGGGTGATGTGGATATCCAGAGCCTTGCCCACCTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: PSRTMVQLFRGTIRV*VRVMWISRALPTSA Trigger: GGCTGAGGTGGGCAAGGCTCTGGATATCCACATCACCCTCACCAACACCCTGATGGTGCCTCTGAATAACTGCACCATGGTTCTGGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS GCA 72 bp | TCCTCAGTGTGGTGGTCCTTGTTGTTCCTGGGGATCTaGAGTTCCACAGACCTGAGCTCCAAGGCTGCCACA | + |
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Preference number: 6 (lower is better) Translates to: SSVWWSLLFLGI*SSTDLSSKAAT Trigger: TGTGGCAGCCTTGGAGCTCAGGTCTGTGGAACTGCAGATCCCCAGGAACAACAAGGACCACCACACTGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110675.3 |
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| CDS GCA 72 bp | TCCTGGCCCCACATGGGTGCCCTAACCAGGTGGAGTTaGAGCCTCACAGGCTTAGCCTTTAAGTTCTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: SWPHMGALTRWS*SLTGLAFKFSD Trigger: GTCTGAGAACTTAAAGGCTAAGCCTGTGAGGCTGCAACTCCACCTGGTTAGGGCACCCATGTGGGGCCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS CCA 72 bp | GAAAGTGGCTCGGGTCCCCAGAAGCTCTGTGGGCTCTaGTCCTGTCTCAGCCACAAAGGTGAGATGATCCTT | + |
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Preference number: 6 (lower is better) Translates to: ESGSGPQKLCGL*SCLSHKGEMIL Trigger: AAGGATCATCTCACCTTTGTGGCTGAGACAGGACCAGAGCCCACAGAGCTTCTGGGGACCCGAGCCACTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS CAA 90 bp | CGCAGGATGAGCTTCGACAAGCCCAAATCCTCAGTGTGGTGGTCCTaGTTGTTCCTGGGGATCTGCAGTTCCACAGACCTGAGCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: RRMSFDKPKSSVWWS*LFLGICSSTDLSSK Trigger: CTTGGAGCTCAGGTCTGTGGAACTGCAGATCCCCAGGAACAACAAGGACCACCACACTGAGGATTTGGGCTTGTCGAAGCTCATCCTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS TCA 72 bp | GTGGGCTCTGGTCCTGTCTCAGCCACAAAGGTGAGATaGTCCTTTTGGGGCTGGAAGGGTCGACTGAAGACT | + |
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Preference number: 6 (lower is better) Translates to: VGSGPVSATKVR*SFWGWKGRLKT Trigger: AGTCTTCAGTCGACCCTTCCAGCCCCAAAAGGATCATCTCACCTTTGTGGCTGAGACAGGACCAGAGCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS TCA 72 bp | TGTGCACAAAAGCGCACCGTCAGTCCGACAGAGCCCTaGACATGGTCTCTGACTGGCACCCTCTGGACATAT | + |
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Preference number: 6 (lower is better) Translates to: CAQKRTVSPTEP*TWSLTGTLWTY Trigger: ATATGTCCAGAGGGTGCCAGTCAGAGACCATGTTCAGGGCTCTGTCGGACTGACGGTGCGCTTTTGTGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS GCA 72 bp | GGATCAGCCTTTCATCTGTCAGCTTGTCCCTGTAACTaGTGTAGGGCAGCAGGAACGGCCACTGTAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: GSAFHLSACPCN*CRAAGTATVAP Trigger: AGGAGCTACAGTGGCCGTTCCTGCTGCCCTACAGCAGTTACAGGGACAAGCTGACAGATGAAAGGCTGATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS GCA 72 bp | TGTCCGGCCATCAGAGTCCCAAGGTCTTTTGTCATCTaGCCATTGATGAGGCCACTCCCCTCCAGAACCATG | + |
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Preference number: 6 (lower is better) Translates to: CPAIRVPRSFVI*PLMRPLPSRTM Trigger: CATGGTTCTGGAGGGGAGTGGCCTCATCAATGGGCAGATGACAAAAGACCTTGGGACTCTGATGGCCGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS CAA 90 bp | AGGATGAGCTTCGACAAGCCCAAATCCTCAGTGTGGTGGTCCTTGTaGTTCCTGGGGATCTGCAGTTCCACAGACCTGAGCTCCAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: RMSFDKPKSSVWWSL*FLGICSSTDLSSKA Trigger: AGCCTTGGAGCTCAGGTCTGTGGAACTGCAGATCCCCAGGAACAACAAGGACCACCACACTGAGGATTTGGGCTTGTCGAAGCTCATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS CAA 72 bp | TTCGACAAGCCCAAATCCTCAGTGTGGTGGTCCTTGTaGTTCCTGGGGATCTGCAGTTCCACAGACCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: FDKPKSSVWWSL*FLGICSSTDLS Trigger: GCTCAGGTCTGTGGAACTGCAGATCCCCAGGAACAACAAGGACCACCACACTGAGGATTTGGGCTTGTCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS CAA 72 bp | AGCTTCGACAAGCCCAAATCCTCAGTGTGGTGGTCCTaGTTGTTCCTGGGGATCTGCAGTTCCACAGACCTG | + |
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Preference number: 6 (lower is better) Translates to: SFDKPKSSVWWS*LFLGICSSTDL Trigger: CAGGTCTGTGGAACTGCAGATCCCCAGGAACAACAAGGACCACCACACTGAGGATTTGGGCTTGTCGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS CAA 72 bp | ACCATGGTGCAGTTATTCAGAGGCACCATCAGGGTGTaGGTGAGGGTGATGTGGATATCCAGAGCCTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: TMVQLFRGTIRV*VRVMWISRALP Trigger: GGGCAAGGCTCTGGATATCCACATCACCCTCACCAACACCCTGATGGTGCCTCTGAATAACTGCACCATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS TCA 72 bp | AGTTCCCCTGAAGCACACCACTGTCGTCATTGCTGTTaGTCATGGCGCTTACCACCCTGCACACATACACCA | + |
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Preference number: 6 (lower is better) Translates to: SSPEAHHCRHCC*SWRLPPCTHTP Trigger: TGGTGTATGTGTGCAGGGTGGTAAGCGCCATGATCAACAGCAATGACGACAGTGGTGTGCTTCAGGGGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS TCA 72 bp | CCTCAGAGGATCCTTCTGGATACTTGTAGGAACTGGTaGTGTCCAGGCGCTCATCTGACCCTACCATCTTGG | + |
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Preference number: 6 (lower is better) Translates to: PQRILLDTCRNW*CPGAHLTLPSW Trigger: CCAAGATGGTAGGGTCAGATGAGCGCCTGGACATCACCAGTTCCTACAAGTATCCAGAAGGATCCTCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS TCA 72 bp | GGGGAGGCTCCAGAGAGAAATCTTTTAGGACCAGAATaGACTGCCCTGTCTCTTCAACCTCAGCGATGCCAG | + |
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Preference number: 6 (lower is better) Translates to: GEAPERNLLGPE*TALSLQPQRCQ Trigger: CTGGCATCGCTGAGGTTGAAGAGACAGGGCAGTTCATTCTGGTCCTAAAAGATTTCTCTCTGGAGCCTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS TCA 72 bp | CTTCAGGGTGTAGTGGCCAATGACCGCACTAGCCGGTaGGAAAATCGAGACTTGGAGAGAGTTGCTGTCAAT | + |
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Preference number: 6 (lower is better) Translates to: LQGVVANDRTSR*ENRDLERVAVN Trigger: ATTGACAGCAACTCTCTCCAAGTCTCGATTTTCTCACCGGCTAGTGCGGTCATTGGCCACTACACCCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS CCA 72 bp | CTTAATGAATGCAGACCGCTCCTCAGAGGATCCTTCTaGATACTTGTAGGAACTGGTGATGTCCAGGCGCTC | + |
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Preference number: 6 (lower is better) Translates to: LNECRPLLRGSF*ILVGTGDVQAL Trigger: GAGCGCCTGGACATCACCAGTTCCTACAAGTATCCAGAAGGATCCTCTGAGGAGCGGTCTGCATTCATTAAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS CAA 90 bp | CCAATGACCGCACTAGCCGGTGAGAAAATCGAGACTTGGAGAGAGTaGCTGTCAATCATGAAGTCAGAAGCACTCCAGACGTTCTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: PMTALAGEKIETWRE*LSIMKSEALQTFSG Trigger: ACCTGAGAACGTCTGGAGTGCTTCTGACTTCATGATTGACAGCAACTCTCTCCAAGTCTCGATTTTCTCACCGGCTAGTGCGGTCATTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS GCA 72 bp | CCAGATTTTGTCTGGCCTCTGAGCCGTCAGCATTTCTaGGGTTCGATCATAGTAGGTGTCGATGGTCAAGTT | + |
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Preference number: 6 (lower is better) Translates to: PDFVWPLSRQHF*GSIIVGVDGQV Trigger: AACTTGACCATCGACACCTACTATGATCGAACCGCAGAAATGCTGACGGCTCAGAGGCCAGACAAAATCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS TCA 72 bp | AGAAAATCGAGACTTGGAGAGAGTTGCTGTCAATCATaGAGTCAGAAGCACTCCAGACGTTCTCAGGTCGGG | + |
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Preference number: 6 (lower is better) Translates to: RKSRLGESCCQS*SQKHSRRSQVG Trigger: CCCGACCTGAGAACGTCTGGAGTGCTTCTGACTTCATGATTGACAGCAACTCTCTCCAAGTCTCGATTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS GCA 72 bp | TCTCGGTTCCAGCAATTTCCAGGAAGCCTTAATGAATaGAGACCGCTCCTCAGAGGATCCTTCTGGATACTT | + |
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Preference number: 6 (lower is better) Translates to: SRFQQFPGSLNE*RPLLRGSFWIL Trigger: AAGTATCCAGAAGGATCCTCTGAGGAGCGGTCTGCATTCATTAAGGCTTCCTGGAAATTGCTGGAACCGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS CAA 90 bp | GTGTCGATGGTCAAGTTTCCATCTGTGTTGTGTGCAGAATGGAAATaGGAAACGACTCGGGTTGGAACACCTAAGCATCTCATTACCGTG | + |
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Preference number: 6 (lower is better) Translates to: VSMVKFPSVLCAEWK*ETTRVGTPKHLITV Trigger: CACGGTAATGAGATGCTTAGGTGTTCCAACCCGAGTCGTTTCCAATTTCCATTCTGCACACAACACAGATGGAAACTTGACCATCGACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS TCA 72 bp | ATACTTGTAGGAACTGGTGATGTCCAGGCGCTCATCTaGCCCTACCATCTTGGTGCTAATTGCTTTCCCAAT | + |
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Preference number: 6 (lower is better) Translates to: ILVGTGDVQALI*PYHLGANCFPN Trigger: ATTGGGAAAGCAATTAGCACCAAGATGGTAGGGTCAGATGAGCGCCTGGACATCACCAGTTCCTACAAGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS CCA 72 bp | TCAGCATTTCTGCGGTTCGATCATAGTAGGTGTCGATaGTCAAGTTTCCATCTGTGTTGTGTGCAGAATGGA | + |
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Preference number: 6 (lower is better) Translates to: SAFLRFDHSRCR*SSFHLCCVQNG Trigger: TCCATTCTGCACACAACACAGATGGAAACTTGACCATCGACACCTACTATGATCGAACCGCAGAAATGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS CAA 90 bp | TTCAAACTGCCCATAGTTCCAAGGCCTGGAGGTAATGGAATTTGTTaGACCCTTGTAGATAAAGCCGTAGTCACTCATGATATACTCCCG | + |
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Preference number: 6 (lower is better) Translates to: FKLPIVPRPGGNGIC*TLVDKAVVTHDILP Trigger: CGGGAGTATATCATGAGTGACTACGGCTTTATCTACAAGGGTCAAACAAATTCCATTACCTCCAGGCCTTGGAACTATGGGCAGTTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS CCA 72 bp | TCAAGTTTCCATCTGTGTTGTGTGCAGAATGGAAATTaGAAACGACTCGGGTTGGAACACCTAAGCATCTCA | + |
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Preference number: 6 (lower is better) Translates to: SSFHLCCVQNGN*KRLGLEHLSIS Trigger: TGAGATGCTTAGGTGTTCCAACCCGAGTCGTTTCCAATTTCCATTCTGCACACAACACAGATGGAAACTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS CAA 72 bp | CCCATAGTTCCAAGGCCTGGAGGTAATGGAATTTGTTaGACCCTTGTAGATAAAGCCGTAGTCACTCATGAT | + |
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Preference number: 6 (lower is better) Translates to: PIVPRPGGNGIC*TLVDKAVVTHD Trigger: ATCATGAGTGACTACGGCTTTATCTACAAGGGTCAAACAAATTCCATTACCTCCAGGCCTTGGAACTATGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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| CDS CCA 72 bp | ACACATACACCACGTTGTTTCTCTGAGAGTGGTCTTTaGATGGGTTCTTTAGAAAATAGAGGCTCTTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: THTPRCFSESGL*MGSLENRGSCS Trigger: TGAACAAGAGCCTCTATTTTCTAAAGAACCCATCCAAAGACCACTCTCAGAGAAACAACGTGGTGTATGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110675.3 ENSMUST00000238428.2 |
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