Pregenerated sensors for TGM6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027403Ensembl transcript IDs: ENSMUST00000028888.5
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGCTGGCTGAGCTCTTGGGCCAGGGCTCTCAGAAATCTGGGACATaGCACTCTCCCAGCAGAAGGGTGACAAGAGTTGGAGGGTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: ELAELLGQGSQKSGT*HSPSRRVTRVGGSL Trigger: GAGGGACCCTCCAACTCTTGTCACCCTTCTGCTGGGAGAGTGGCATGTCCCAGATTTCTGAGAGCCCTGGCCCAAGAGCTCAGCCAGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR TCA 90 bp | AGGATCGGCACCGTGCAAGCCATTCTAGTTCCAAGAAGGAGTGGCTaGGTGATCTGGGGCAGTCCTGTGAACTCCAGGATGGCCAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: RIGTVQAILVPRRSG*VIWGSPVNSRMARA Trigger: AGCTCTGGCCATCCTGGAGTTCACAGGACTGCCCCAGATCACTCAGCCACTCCTTCTTGGAACTAGAATGGCTTGCACGGTGCCGATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR CCA 90 bp | GAAATCTGGGACATGCCACTCTCCCAGCAGAAGGGTGACAAGAGTTaGAGGGTCCCTCTGCTCTTACATCAGCCACTTGTCCTGAGGGTG | + |
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Preference number: 1 (lower is better) Translates to: EIWDMPLSQQKGDKS*RVPLLLHQPLVLRV Trigger: CACCCTCAGGACAAGTGGCTGATGTAAGAGCAGAGGGACCCTCCAACTCTTGTCACCCTTCTGCTGGGAGAGTGGCATGTCCCAGATTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR TCA 90 bp | AGGGCTCTCAGAAATCTGGGACATGCCACTCTCCCAGCAGAAGGGTaGCAAGAGTTGGAGGGTCCCTCTGCTCTTACATCAGCCACTTGT | + |
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Preference number: 1 (lower is better) Translates to: RALRNLGHATLPAEG*QELEGPSALTSATC Trigger: ACAAGTGGCTGATGTAAGAGCAGAGGGACCCTCCAACTCTTGTCACCCTTCTGCTGGGAGAGTGGCATGTCCCAGATTTCTGAGAGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR CCA 90 bp | AGAGATGATAGAAAGGCAAGAAGTGGTGAGTTACCTGGGCTGAGCTaGCTGAGCTCTTGGGCCAGGGCTCTCAGAAATCTGGGACATGCC | + |
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Preference number: 1 (lower is better) Translates to: RDDRKARSGELPGLS*LSSWARALRNLGHA Trigger: GGCATGTCCCAGATTTCTGAGAGCCCTGGCCCAAGAGCTCAGCCAGCTCAGCCCAGGTAACTCACCACTTCTTGCCTTTCTATCATCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR CCA 90 bp | GCCAAAGACAGAAGCAGGACCAACCTGAGACCCCTGTCTCTTATATaGGAGAAACAGACAGATGGACAAAGTCCTCCCCAGTTCCTCGTG | + |
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Preference number: 1 (lower is better) Translates to: AKDRSRTNLRPLSLI*EKQTDGQSPPQFLV Trigger: CACGAGGAACTGGGGAGGACTTTGTCCATCTGTCTGTTTCTCCCATATAAGAGACAGGGGTCTCAGGTTGGTCCTGCTTCTGTCTTTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR CCA 90 bp | GTTGGGGGACCACTTGGTTCTCAACCTTGTTTCTGCTTTGTCTTATaGCTTCAGAAAGGCTCCTCTATAATGGGGATGCTCCGGCTTGGA | + |
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Preference number: 1 (lower is better) Translates to: VGGPLGSQPCFCFVL*LQKGSSIMGMLRLG Trigger: TCCAAGCCGGAGCATCCCCATTATAGAGGAGCCTTTCTGAAGCCATAAGACAAAGCAGAAACAAGGTTGAGAACCAAGTGGTCCCCCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR TCA 90 bp | TCTAGTGGCATATTCTTCATGGCCTTGTTGTGTCTACTCTGGTCCTaGTTCCAGGCATCCATGTCCTGCTTTGACTCCAAGTGTAGGATC | + |
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Preference number: 1 (lower is better) Translates to: SSGIFFMALLCLLWS*FQASMSCFDSKCRI Trigger: GATCCTACACTTGGAGTCAAAGCAGGACATGGATGCCTGGAATCAGGACCAGAGTAGACACAACAAGGCCATGAAGAATATGCCACTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR-3UTR CCA 90 bp | TTTGGGAGGAGGGTGTACATGCAGCAGGTAAGTGTGGGTGCCCACAGAGACCAGAGTTCCAAGAAGGAGTaGCTGAGTGATCTGGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: FGRRVYMQQVSVGAHRDQSSKKE*LSDLGQ Trigger: CTGCCCCAGATCACTCAGCCACTCCTTCTTGGAACT...CTGGTCTCTGTGGGCACCCACACTTACCTGCTGCATGTACACCCTCCTCCCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR-3UTR TCA 90 bp | TTTGGGAGGAGGGTGTACATGCAGCAGGTAAGTGTGGGTGCCCACAGAGACCAGGCTCTTTTAAGAACATaGGTTGGGGGACCACTTGGT | + |
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Preference number: 2 (lower is better) Translates to: FGRRVYMQQVSVGAHRDQALLRT*VGGPLG Trigger: ACCAAGTGGTCCCCCAACTCATGTTCTTAAAAGAGC...CTGGTCTCTGTGGGCACCCACACTTACCTGCTGCATGTACACCCTCCTCCCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR-3UTR CCA 90 bp | TTTGGGAGGAGGGTGTACATGCAGCAGGTAAGTGTGGGTGCCCACAGAGACCAGAGTTGGGGGACCACTTaGTTCTCAACCTTGTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: FGRRVYMQQVSVGAHRDQSWGTT*FSTLFL Trigger: CAGAAACAAGGTTGAGAACCAAGTGGTCCCCCAACT...CTGGTCTCTGTGGGCACCCACACTTACCTGCTGCATGTACACCCTCCTCCCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR-3UTR CCA 90 bp | AGGCTCCTCTATAATGGGGATGCTCCGGCTTGGAGAATTCTTGGGTCCAAATGTGGAGAAACAGACAGATaGACAAAGTCCTCCCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: RLLYNGDAPAWRILGSKCGETDR*TKSSPV Trigger: AACTGGGGAGGACTTTGTCCATCTGTCTGTTTCTCC...ACATTTGGACCCAAGAATTCTCCAAGCCGGAGCATCCCCATTATAGAGGAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR-3UTR CCA 90 bp | GAACATGAGTTGGGGGACCACTTGGTTCTCAACCTTGTTTCTGCTTTGTCTTATGGGCTCTCAGAAATCTaGGACATGCCACTCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: EHELGDHLVLNLVSALSYGLSEI*DMPLSQ Trigger: CTGGGAGAGTGGCATGTCCCAGATTTCTGAGAGCCC...ATAAGACAAAGCAGAAACAAGGTTGAGAACCAAGTGGTCCCCCAACTCATGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR-3UTR TCA 90 bp | GAACATGAGTTGGGGGACCACTTGGTTCTCAACCTTGTTTCTGCTTTGTCTTATAAAGGCAAGAAGTGGTaGGTTACCTGGGCTGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: EHELGDHLVLNLVSALSYKGKKW*VTWAEL Trigger: CAGCTCAGCCCAGGTAACTCACCACTTCTTGCCTTT...ATAAGACAAAGCAGAAACAAGGTTGAGAACCAAGTGGTCCCCCAACTCATGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR-3UTR CCA 90 bp | GTCTTCTTCAGCTGTTCTCAGGCAGTTTTAGCTCCATCACCCAAATCCAGAGTCGGCTTGGAGAATTCTTaGGTCCAAATGTGGTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: VFFSCSQAVLAPSPKSRVGLENS*VQMWSG Trigger: TCCTGACCACATTTGGACCCAAGAATTCTCCAAGCC...GACTCTGGATTTGGGTGATGGAGCTAAAACTGCCTGAGAACAGCTGAAGAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR CAA 90 bp | GTACTCTTAACAGCTGAGCCATCTCTGCAATTCCCTCACCGTCATTaGTATCCAAGAGGCACTGAGTTGCAGATGCACCTGTTGTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: VLLTAEPSLQFPHRH*YPRGTELQMHLLFV Trigger: AACAAACAACAGGTGCATCTGCAACTCAGTGCCTCTTGGATACAAATGACGGTGAGGGAATTGCAGAGATGGCTCAGCTGTTAAGAGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR-3UTR GCA 90 bp | AATGTGGTCAGGACATTTGAAGAGATGATAGAAAGGCAAGAAGTGGTGAGTTACCAGAAATCTGGGACATaGCACTCTCCCAGCAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: NVVRTFEEMIERQEVVSYQKSGT*HSPSRR Trigger: CCTTCTGCTGGGAGAGTGGCATGTCCCAGATTTCTG...GTAACTCACCACTTCTTGCCTTTCTATCATCTCTTCAAATGTCCTGACCACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR-3UTR CCA 90 bp | GTCTTCTTCAGCTGTTCTCAGGCAGTTTTAGCTCCATCACCCAAATCCAGAGTCTCTTGGGTCCAAATGTaGTCAGGACATTTGAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: VFFSCSQAVLAPSPKSRVSWVQM*SGHLKR Trigger: TCTCTTCAAATGTCCTGACCACATTTGGACCCAAGA...GACTCTGGATTTGGGTGATGGAGCTAAAACTGCCTGAGAACAGCTGAAGAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR-3UTR GCA 90 bp | GATTTATTTTATTTTAATTGCATGTGTTTGGGAGGAGGGTGTACATGCAGCAGGGTTGGAGGGTCCCTCTaGTCTTACATCAGCCACTTG | + |
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Preference number: 2 (lower is better) Translates to: DLFYFNCMCLGGGCTCSRVGGSL*SYISHL Trigger: CAAGTGGCTGATGTAAGAGCAGAGGGACCCTCCAAC...CCTGCTGCATGTACACCCTCCTCCCAAACACATGCAATTAAAATAAAATAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR-3UTR CCA 90 bp | TTTAAGAACATGAGTTGGGGGACCACTTGGTTCTCAACCTTGTTTCTGCTTTGTCCCCTGTCTCTTATATaGGAGAAACAGACAGATGGA | + |
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Preference number: 2 (lower is better) Translates to: FKNMSWGTTWFSTLFLLCPLSLI*EKQTDG Trigger: TCCATCTGTCTGTTTCTCCCATATAAGAGACAGGGG...ACAAAGCAGAAACAAGGTTGAGAACCAAGTGGTCCCCCAACTCATGTTCTTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR GCA 72 bp | GAGCTCTTGGGCCAGGGCTCTCAGAAATCTGGGACATaGCACTCTCCCAGCAGAAGGGTGACAAGAGTTGGA | + |
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Preference number: 3 (lower is better) Translates to: ELLGQGSQKSGT*HSPSRRVTRVG Trigger: TCCAACTCTTGTCACCCTTCTGCTGGGAGAGTGGCATGTCCCAGATTTCTGAGAGCCCTGGCCCAAGAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR GCA 72 bp | TGGGAGGAGGGTGTACATGCAGCAGGTAAGTGTGGGTaGCCACAGAGACCAGAAATGTTGGAGCCCTGGAGT | + |
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Preference number: 3 (lower is better) Translates to: WEEGVHAAGKCG*PQRPEMLEPWS Trigger: ACTCCAGGGCTCCAACATTTCTGGTCTCTGTGGGCACCCACACTTACCTGCTGCATGTACACCCTCCTCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR CCA 72 bp | CGGCACCGTGCAAGCCATTCTAGTTCCAAGAAGGAGTaGCTGAGTGATCTGGGGCAGTCCTGTGAACTCCAG | + |
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Preference number: 3 (lower is better) Translates to: RHRASHSSSKKE*LSDLGQSCELQ Trigger: CTGGAGTTCACAGGACTGCCCCAGATCACTCAGCCACTCCTTCTTGGAACTAGAATGGCTTGCACGGTGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR TCA 72 bp | ACCGTGCAAGCCATTCTAGTTCCAAGAAGGAGTGGCTaGGTGATCTGGGGCAGTCCTGTGAACTCCAGGATG | + |
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Preference number: 3 (lower is better) Translates to: TVQAILVPRRSG*VIWGSPVNSRM Trigger: CATCCTGGAGTTCACAGGACTGCCCCAGATCACTCAGCCACTCCTTCTTGGAACTAGAATGGCTTGCACGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR TCA 72 bp | AGAAATCTGGGACATGCCACTCTCCCAGCAGAAGGGTaGCAAGAGTTGGAGGGTCCCTCTGCTCTTACATCA | + |
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Preference number: 3 (lower is better) Translates to: RNLGHATLPAEG*QELEGPSALTS Trigger: TGATGTAAGAGCAGAGGGACCCTCCAACTCTTGTCACCCTTCTGCTGGGAGAGTGGCATGTCCCAGATTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR TCA 72 bp | AGCTCATGGAGGCCAAAGACAGAAGCAGGACCAACCTaGGACCCCTGTCTCTTATATGGGAGAAACAGACAG | + |
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Preference number: 3 (lower is better) Translates to: SSWRPKTEAGPT*DPCLLYGRNRQ Trigger: CTGTCTGTTTCTCCCATATAAGAGACAGGGGTCTCAGGTTGGTCCTGCTTCTGTCTTTGGCCTCCATGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR CCA 72 bp | AGAAGCAGGACCAACCTGAGACCCCTGTCTCTTATATaGGAGAAACAGACAGATGGACAAAGTCCTCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: RSRTNLRPLSLI*EKQTDGQSPPQ Trigger: CTGGGGAGGACTTTGTCCATCTGTCTGTTTCTCCCATATAAGAGACAGGGGTCTCAGGTTGGTCCTGCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR CCA 72 bp | TCAGAAAGGCTCCTCTATAATGGGGATGCTCCGGCTTaGAGAATTCTTGGGTCCAAATGTGGTCAGGACATT | + |
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Preference number: 3 (lower is better) Translates to: SERLLYNGDAPA*RILGSKCGQDI Trigger: AATGTCCTGACCACATTTGGACCCAAGAATTCTCCAAGCCGGAGCATCCCCATTATAGAGGAGCCTTTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR-3UTR CAA 90 bp | AGGGTGTACATGCAGCAGGTAAGTGTGGGTGCCCACAGAGACCAGAAATGTTGGACTTGGTTCTCAACCTaGTTTCTGCTTTGTCTTATG | + |
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Preference number: 3 (lower is better) Translates to: RVYMQQVSVGAHRDQKCWTWFST*FLLCLM Trigger: CATAAGACAAAGCAGAAACAAGGTTGAGAACCAAGT...CCAACATTTCTGGTCTCTGTGGGCACCCACACTTACCTGCTGCATGTACACCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR-3UTR CAA 90 bp | GAACTCCTTTGTCTTCTTCAGCTGTTCTCAGGCAGTTTTAGCTCCATCACCCAAGAGTTGGGGGACCACTaGGTTCTCAACCTTGTTTCT | + |
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Preference number: 3 (lower is better) Translates to: ELLCLLQLFSGSFSSITQELGDH*VLNLVS Trigger: AGAAACAAGGTTGAGAACCAAGTGGTCCCCCAACTC...TTGGGTGATGGAGCTAAAACTGCCTGAGAACAGCTGAAGAAGACAAAGGAGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR TCA 72 bp | ATATTCTTCATGGCCTTGTTGTGTCTACTCTGGTCCTaGTTCCAGGCATCCATGTCCTGCTTTGACTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: IFFMALLCLLWS*FQASMSCFDSK Trigger: CTTGGAGTCAAAGCAGGACATGGATGCCTGGAATCAGGACCAGAGTAGACACAACAAGGCCATGAAGAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR TCA 72 bp | GCAATTCCCTCACCGTCATTTGTATCCAAGAGGCACTaGGTTGCAGATGCACCTGTTGTTTGTTTAATGTTC | + |
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Preference number: 3 (lower is better) Translates to: AIPSPSFVSKRH*VADAPVVCLMF Trigger: GAACATTAAACAAACAACAGGTGCATCTGCAACTCAGTGCCTCTTGGATACAAATGACGGTGAGGGAATTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR-3UTR CAA 90 bp | GAACTCCTTTGTCTTCTTCAGCTGTTCTCAGGCAGTTTTAGCTCCATCACCCAAAACCTTGTTTCTGCTTaGTCTTATGGCTTCAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: ELLCLLQLFSGSFSSITQNLVSA*SYGFRK Trigger: CTTTCTGAAGCCATAAGACAAAGCAGAAACAAGGTT...TTGGGTGATGGAGCTAAAACTGCCTGAGAACAGCTGAAGAAGACAAAGGAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| 3UTR GCA 72 bp | TCCCTCACCGTCATTTGTATCCAAGAGGCACTGAGTTaGAGATGCACCTGTTGTTTGTTTAATGTTCTTAAA | + |
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Preference number: 3 (lower is better) Translates to: SLTVICIQEALS*RCTCCLFNVLK Trigger: TTTAAGAACATTAAACAAACAACAGGTGCATCTGCAACTCAGTGCCTCTTGGATACAAATGACGGTGAGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS-3UTR CCA 90 bp | TGGCTGAGTGATCTGGGGCAGTCCTGTGAACTCCAGGATGGCCAGAGCTGGAGTAGACACCGCGCACGCTaGCCCTGCGGATCCGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: WLSDLGQSCELQDGQSWSRHRAR*PCGSAS Trigger: GGAGGCGGATCCGCAGGGCCAGCGTGCGCGGTGTCT...ACTCCAGCTCTGGCCATCCTGGAGTTCACAGGACTGCCCCAGATCACTCAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS-3UTR GCA 90 bp | AGGGTGTACATGCAGCAGGTAAGTGTGGGTGCCCACAGAGACCAGAAATGTTGGCGCGCACGCTGGCCCTaGGGATCCGCCTCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: RVYMQQVSVGAHRDQKCWRARWP*GSASSS Trigger: GGAGGAGGAGGCGGATCCGCAGGGCCAGCGTGCGCG...CCAACATTTCTGGTCTCTGTGGGCACCCACACTTACCTGCTGCATGTACACCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS-3UTR GCA 90 bp | GCTCTTGGGCCAGGGCTCTCAGAAATCTGGGACATGCCACTCTCCCAGCAGAAGGCTTTGCTGTACACCTaGCTCTCCTTCCGGGACCCT | + |
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Preference number: 4 (lower is better) Translates to: ALGPGLSEIWDMPLSQQKALLYT*LSFRDP Trigger: AGGGTCCCGGAAGGAGAGGCAGGTGTACAGCAAAGC...CTTCTGCTGGGAGAGTGGCATGTCCCAGATTTCTGAGAGCCCTGGCCCAAGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS-3UTR CCA 90 bp | GCTCTTGGGCCAGGGCTCTCAGAAATCTGGGACATGCCACTCTCCCAGCAGAAGTCTCCTCTTGGGGAGTaGCATCCAGAACCTGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: ALGPGLSEIWDMPLSQQKSPLGE*HPEPAS Trigger: GCTGGCAGGTTCTGGATGCCACTCCCCAAGAGGAGA...CTTCTGCTGGGAGAGTGGCATGTCCCAGATTTCTGAGAGCCCTGGCCCAAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS-3UTR CCA 90 bp | TGGCTGAGTGATCTGGGGCAGTCCTGTGAACTCCAGGATGGCCAGAGCTGGAGTCCTTCGCTCTCCTCTTaGGGAGTGGCATCCAGAACC | + |
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Preference number: 4 (lower is better) Translates to: WLSDLGQSCELQDGQSWSPSLSS*GVASRT Trigger: GGTTCTGGATGCCACTCCCCAAGAGGAGAGCGAAGG...ACTCCAGCTCTGGCCATCCTGGAGTTCACAGGACTGCCCCAGATCACTCAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS-3UTR GCA 90 bp | AGGGTGTACATGCAGCAGGTAAGTGTGGGTGCCCACAGAGACCAGAAATGTTGGCCCTGGGCTCGGATGTaGTTCTCCACGCCTCGGAAG | + |
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Preference number: 4 (lower is better) Translates to: RVYMQQVSVGAHRDQKCWPWARM*FSTPRK Trigger: CTTCCGAGGCGTGGAGAAGCACATCCGAGCCCAGGG...CCAACATTTCTGGTCTCTGTGGGCACCCACACTTACCTGCTGCATGTACACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS-3UTR GCA 90 bp | GCTCTTGGGCCAGGGCTCTCAGAAATCTGGGACATGCCACTCTCCCAGCAGAAGGCCCAGGTCCTGTCGTaGAAACCAGCTCTCATTCCA | + |
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Preference number: 4 (lower is better) Translates to: ALGPGLSEIWDMPLSQQKAQVLS*KPALIP Trigger: TGGAATGAGAGCTGGTTTGCACGACAGGACCTGGGC...CTTCTGCTGGGAGAGTGGCATGTCCCAGATTTCTGAGAGCCCTGGCCCAAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS-3UTR CCA 90 bp | GACCCCTGTCTCTTATATGGGAGAAACAGACAGATGGACAAAGTCCTCCCCAGTGCCAGCTTCAGGTCCTaGCCGAGCACCGGTGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: DPCLLYGRNRQMDKVLPSASFRS*PSTGGS Trigger: GGAGCCACCGGTGCTCGGCCAGGACCTGAAGCTGGC...ACTGGGGAGGACTTTGTCCATCTGTCTGTTTCTCCCATATAAGAGACAGGGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS-3UTR TCA 90 bp | AGGGTGTACATGCAGCAGGTAAGTGTGGGTGCCCACAGAGACCAGAAATGTTGGTGTCGTGGGCTGAGTTaGAGTTGGACACCACCCTGG | + |
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Preference number: 4 (lower is better) Translates to: RVYMQQVSVGAHRDQKCWCRGLS*SWTPPW Trigger: CCAGGGTGGTGTCCAACTTCAACTCAGCCCACGACA...CCAACATTTCTGGTCTCTGTGGGCACCCACACTTACCTGCTGCATGTACACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS-3UTR GCA 90 bp | AGACCCCTGTCTCTTATATGGGAGAAACAGACAGATGGACAAAGTCCTCCCCAGCTGACAAGGTCCACCTaGAGCTGCCTGGGGCCACTC | + |
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Preference number: 4 (lower is better) Translates to: RPLSLIWEKQTDGQSPPQLTRST*SCLGPL Trigger: GAGTGGCCCCAGGCAGCTGCAGGTGGACCTTGTCAG...CTGGGGAGGACTTTGTCCATCTGTCTGTTTCTCCCATATAAGAGACAGGGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS-3UTR GCA 90 bp | AGGCTCCTCTATAATGGGGATGCTCCGGCTTGGAGAATTCTTGGGTCCAAATGTGTGGAGAGCCTCGGATaGGTGAGGTCCTGTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: RLLYNGDAPAWRILGSKCVESLG*VRSCLH Trigger: GTGGAGACAGGACCTCACGCATCCGAGGCTCTCCAC...ACATTTGGACCCAAGAATTCTCCAAGCCGGAGCATCCCCATTATAGAGGAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS-3UTR GCA 90 bp | TCTCAGAAATCTGGGACATGCCACTCTCCCAGCAGAAGGGTGACAAGAGTTGGAGTAGGATGGCCACACTaGCACGCCAGTTCAGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: SQKSGTCHSPSRRVTRVGVGWPH*HASSVG Trigger: ACCCACTGAACTGGCGTGGCAGTGTGGCCATCCTAC...TCCAACTCTTGTCACCCTTCTGCTGGGAGAGTGGCATGTCCCAGATTTCTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS-3UTR GCA 90 bp | TCTATAATGGGGATGCTCCGGCTTGGAGAATTCTTGGGTCCAAATGTGGTCAGGAGGTCCACCTGCAGCTaGCTGGGGCCACTCTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: SIMGMLRLGEFLGPNVVRRSTCS*LGPLLE Trigger: TTCCAAGAGTGGCCCCAGGCAGCTGCAGGTGGACCT...CCTGACCACATTTGGACCCAAGAATTCTCCAAGCCGGAGCATCCCCATTATAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS-3UTR CCA 90 bp | GCTCTTGGGCCAGGGCTCTCAGAAATCTGGGACATGCCACTCTCCCAGCAGAAGCTCTCATTCCAGACGTaGAAGTTCCACATGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALGPGLSEIWDMPLSQQKLSFQT*KFHMLS Trigger: AGACAGCATGTGGAACTTCCACGTCTGGAATGAGAG...CTTCTGCTGGGAGAGTGGCATGTCCCAGATTTCTGAGAGCCCTGGCCCAAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CCA 90 bp | AGACCCCTGTCTCTTATATGGGAGAAACAGACAGATGGACAAAGTCCTCCCCAGCCAGCCATCATAGGATaGGCCCAGGTCCTGTCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPLSLIWEKQTDGQSPPQPAIIG*AQVLSC Trigger: GCACGACAGGACCTGGGCCCATCCTATGATGGCTGG...CTGGGGAGGACTTTGTCCATCTGTCTGTTTCTCCCATATAAGAGACAGGGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CCA 90 bp | GAGGGTGTACATGCAGCAGGTAAGTGTGGGTGCCCACAGAGACCAGAAATGTTGACGAAGGGGCCATCATaGGCTAGATGCACGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: EGVHAAGKCGCPQRPEMLTKGPS*ARCTSP Trigger: AGGTGACGTGCATCTAGCCCATGATGGCCCCTTCGT...CAACATTTCTGGTCTCTGTGGGCACCCACACTTACCTGCTGCATGTACACCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CCA 90 bp | AACCTGAGACCCCTGTCTCTTATATGGGAGAAACAGACAGATGGACAAAGTCCTCCACCTGCAGCTGCCTaGGGCCACTCTTGGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLRPLSLIWEKQTDGQSPPPAAA*GHSWKG Trigger: CCCCTTCCAAGAGTGGCCCCAGGCAGCTGCAGGTGG...AGGACTTTGTCCATCTGTCTGTTTCTCCCATATAAGAGACAGGGGTCTCAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CCA 90 bp | TTTGGGAGGAGGGTGTACATGCAGCAGGTAAGTGTGGGTGCCCACAGAGACCAGTTGGCTGTAGCCACGTaGATGATCACAAAGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FGRRVYMQQVSVGAHRDQLAVAT*MITKPL Trigger: CAAGGGCTTTGTGATCATCCACGTGGCTACAGCCAA...CTGGTCTCTGTGGGCACCCACACTTACCTGCTGCATGTACACCCTCCTCCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| 3UTR CAA 72 bp | TACTCTGGTCCTGATTCCAGGCATCCATGTCCTGCTTaGACTCCAAGTGTAGGATCGGCACCGTGCAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YSGPDSRHPCPA*TPSVGSAPCKP Trigger: TGGCTTGCACGGTGCCGATCCTACACTTGGAGTCAAAGCAGGACATGGATGCCTGGAATCAGGACCAGAGTA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR GCA 90 bp | GAACTCCTTTGTCTTCTTCAGCTGTTCTCAGGCAGTTTTAGCTCCATCACCCAAGGACACCACCCTGGTTaGGATCCCCAGGCACCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ELLCLLQLFSGSFSSITQGHHPG*DPQAPE Trigger: CTCAGGTGCCTGGGGATCGCAACCAGGGTGGTGTCC...TTGGGTGATGGAGCTAAAACTGCCTGAGAACAGCTGAAGAAGACAAAGGAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR GCA 90 bp | TCTCAGAAATCTGGGACATGCCACTCTCCCAGCAGAAGGGTGACAAGAGTTGGACTTGGAGAAGGCCACTaGCCTCTACCATCAGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SQKSGTCHSPSRRVTRVGLGEGH*PLPSAH Trigger: GTGTGCTGATGGTAGAGGGCAGTGGCCTTCTCCAAG...TCCAACTCTTGTCACCCTTCTGCTGGGAGAGTGGCATGTCCCAGATTTCTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CCA 90 bp | AGACCCCTGTCTCTTATATGGGAGAAACAGACAGATGGACAAAGTCCTCCCCAGCACTCCTACCACTGCTaGCCCCAGCACCTTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: RPLSLIWEKQTDGQSPPQHSYHC*PQHLDG Trigger: ACCATCAAGGTGCTGGGGCCAGCAGTGGTAGGAGTG...CTGGGGAGGACTTTGTCCATCTGTCTGTTTCTCCCATATAAGAGACAGGGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR TCA 90 bp | GACCCCTGTCTCTTATATGGGAGAAACAGACAGATGGACAAAGTCCTCCCCAGTATCGGTGTCGTGGGCTaGGTTGAAGTTGGACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: DPCLLYGRNRQMDKVLPSIGVVG*VEVGHH Trigger: GTGGTGTCCAACTTCAACTCAGCCCACGACACCGAT...ACTGGGGAGGACTTTGTCCATCTGTCTGTTTCTCCCATATAAGAGACAGGGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR TCA 90 bp | CTCCGGCTTGGAGAATTCTTGGGTCCAAATGTGGTCAGGACATTTGAAGAGATGGCTTCTCGCCCTTACTaGCAAGGCACATGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRLGEFLGPNVVRTFEEMASRPY*QGTWQP Trigger: TGGCTGCCATGTGCCTTGTCAGTAAGGGCGAGAAGC...CATCTCTTCAAATGTCCTGACCACATTTGGACCCAAGAATTCTCCAAGCCGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR GCA 90 bp | AGACCCCTGTCTCTTATATGGGAGAAACAGACAGATGGACAAAGTCCTCCCCAGTGTCCACACTCAGATTaGCATCGGTGTCGTGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPLSLIWEKQTDGQSPPQCPHSD*HRCRGL Trigger: CAGCCCACGACACCGATGGCAATCTGAGTGTGGACA...CTGGGGAGGACTTTGTCCATCTGTCTGTTTCTCCCATATAAGAGACAGGGGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR GCA 90 bp | GAGGGTGTACATGCAGCAGGTAAGTGTGGGTGCCCACAGAGACCAGAAATGTTGCGTGGAAGTTCCACATaGTGTCTTCTGTCAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EGVHAAGKCGCPQRPEMLRGSST*CLLSGP Trigger: AGGACCTGACAGAAGACAGCATGTGGAACTTCCACG...CAACATTTCTGGTCTCTGTGGGCACCCACACTTACCTGCTGCATGTACACCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR GCA 90 bp | AGACCCCTGTCTCTTATATGGGAGAAACAGACAGATGGACAAAGTCCTCCCCAGTCTCTGCCACAGGCTTaGGGGTATAGAGGATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPLSLIWEKQTDGQSPPQSLPQA*GYRGWW Trigger: CCACCATCCTCTATACCCGCAAGCCTGTGGCAGAGA...CTGGGGAGGACTTTGTCCATCTGTCTGTTTCTCCCATATAAGAGACAGGGGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR GCA 90 bp | TCTATAATGGGGATGCTCCGGCTTGGAGAATTCTTGGGTCCAAATGTGGTCAGGTGTCACTCCTACCACTaGTGGCCCCAGCACCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SIMGMLRLGEFLGPNVVRCHSYH*WPQHLD Trigger: ATCAAGGTGCTGGGGCCAGCAGTGGTAGGAGTGACA...CCTGACCACATTTGGACCCAAGAATTCTCCAAGCCGGAGCATCCCCATTATAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR TCA 90 bp | GAACTCCTTTGTCTTCTTCAGCTGTTCTCAGGCAGTTTTAGCTCCATCACCCAACTGGGAACTGTGAGCTaGCAAGGTCCACCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ELLCLLQLFSGSFSSITQLGTVS*QGPPAA Trigger: AGCTGCAGGTGGACCTTGTCAGCTCACAGTTCCCAG...TTGGGTGATGGAGCTAAAACTGCCTGAGAACAGCTGAAGAAGACAAAGGAGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR GCA 90 bp | AGGCTCCTCTATAATGGGGATGCTCCGGCTTGGAGAATTCTTGGGTCCAAATGTCCTCCATATTTGCCCTaGCACTGGCCTTGTACCACA | + |
|
Preference number: 4 (lower is better) Translates to: RLLYNGDAPAWRILGSKCPPYLP*HWPCTT Trigger: TGTGGTACAAGGCCAGTGGCAGGGCAAATATGGAGG...ACATTTGGACCCAAGAATTCTCCAAGCCGGAGCATCCCCATTATAGAGGAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR GCA 90 bp | TCTCAGAAATCTGGGACATGCCACTCTCCCAGCAGAAGGGTGACAAGAGTTGGATACCACCTCCATATTTaGCCTGCCACTGGCCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SQKSGTCHSPSRRVTRVGYHLHI*PATGLV Trigger: TACAAGGCCAGTGGCAGGGCAAATATGGAGGTGGTA...TCCAACTCTTGTCACCCTTCTGCTGGGAGAGTGGCATGTCCCAGATTTCTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CCA 90 bp | TCTCAGAAATCTGGGACATGCCACTCTCCCAGCAGAAGGGTGACAAGAGTTGGATCTAGCTCTGCTGTCTaGAATACGGCTTTGGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQKSGTCHSPSRRVTRVGSSSAV*NTALVW Trigger: CCACACCAAAGCCGTATTCCAGACAGCAGAGCTAGA...TCCAACTCTTGTCACCCTTCTGCTGGGAGAGTGGCATGTCCCAGATTTCTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CCA 90 bp | TGGTTCTCAACCTTGTTTCTGCTTTGTCTTATGGCTTCAGAAAGGCTCCTCTATGGTGGGACACATCGGTaGCTGGGTCCTCCTGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: WFSTLFLLCLMASERLLYGGTHR*LGPPGD Trigger: GTCACCAGGAGGACCCAGCCACCGATGTGTCCCACC...ATAGAGGAGCCTTTCTGAAGCCATAAGACAAAGCAGAAACAAGGTTGAGAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CCA 90 bp | CAACCTGAGACCCCTGTCTCTTATATGGGAGAAACAGACAGATGGACAAAGTCCTATTTGCCCTGCCACTaGCCTTGTACCACACCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: QPETPVSYMGETDRWTKSYLPCH*PCTTPR Trigger: CCGAGGTGTGGTACAAGGCCAGTGGCAGGGCAAATA...GGACTTTGTCCATCTGTCTGTTTCTCCCATATAAGAGACAGGGGTCTCAGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| 3UTR CAA 72 bp | GATGGCCAGAGCTGGAGTATATCCATGCTGCCCAGTTaGGGGGAGAACTCCTTTGTCTTCTTCAGCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DGQSWSISMLPS*GENSFVFFSCS Trigger: AGAACAGCTGAAGAAGACAAAGGAGTTCTCCCCCAAACTGGGCAGCATGGATATACTCCAGCTCTGGCCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| 3UTR CAA 72 bp | ACAGCTGAGCCATCTCTGCAATTCCCTCACCGTCATTaGTATCCAAGAGGCACTGAGTTGCAGATGCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: TAEPSLQFPHRH*YPRGTELQMHL Trigger: CAGGTGCATCTGCAACTCAGTGCCTCTTGGATACAAATGACGGTGAGGGAATTGCAGAGATGGCTCAGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR TCA 90 bp | GTCTTCTTCAGCTGTTCTCAGGCAGTTTTAGCTCCATCACCCAAATCCAGAGTCCCAAGACTTCCACAGTaGCTGTCACTCCTACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VFFSCSQAVLAPSPKSRVPRLPQ*LSLLPL Trigger: CAGTGGTAGGAGTGACAGTCACTGTGGAAGTCTTGG...GACTCTGGATTTGGGTGATGGAGCTAAAACTGCCTGAGAACAGCTGAAGAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR GCA 90 bp | GACCCCTGTCTCTTATATGGGAGAAACAGACAGATGGACAAAGTCCTCCCCAGTCCAGGTGATGTAGTCTaGATTGACCTCCGCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: DPCLLYGRNRQMDKVLPSPGDVV*IDLRKD Trigger: GTCTTTGCGGAGGTCAATGCAGACTACATCACCTGG...ACTGGGGAGGACTTTGTCCATCTGTCTGTTTCTCCCATATAAGAGACAGGGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR TCA 90 bp | GAACTCCTTTGTCTTCTTCAGCTGTTCTCAGGCAGTTTTAGCTCCATCACCCAAGCTTGTACCTGCCCTTaGACCACTTCTGTAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: ELLCLLQLFSGSFSSITQACTCP*TTSVGW Trigger: CCATCCTACAGAAGTGGTTCAAGGGCAGGTACAAGC...TTGGGTGATGGAGCTAAAACTGCCTGAGAACAGCTGAAGAAGACAAAGGAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR GCA 90 bp | ATCCAGTGCTCTTTTAAGAACATGAGTTGGGGGACCACTTGGTTCTCAACCTTGCCATCATGGGCTAGATaGACGTCACCTTCACGGATG | + |
|
Preference number: 4 (lower is better) Translates to: IQCSFKNMSWGTTWFSTLPSWAR*TSPSRM Trigger: CATCCGTGAAGGTGACGTGCATCTAGCCCATGATGG...CAAGGTTGAGAACCAAGTGGTCCCCCAACTCATGTTCTTAAAAGAGCACTGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CCA 90 bp | GAACATGAGTTGGGGGACCACTTGGTTCTCAACCTTGTTTCTGCTTTGTCTTATCCCAGCTTCACGGTGTaGGATTCACGCAGGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EHELGDHLVLNLVSALSYPSFTV*DSRRIS Trigger: AGAGATCCTGCGTGAATCCCACACCGTGAAGCTGGG...ATAAGACAAAGCAGAAACAAGGTTGAGAACCAAGTGGTCCCCCAACTCATGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CCA 90 bp | ATCCAGTGCTCTTTTAAGAACATGAGTTGGGGGACCACTTGGTTCTCAACCTTGCCTGAGGCTGCAAGCTaGGCACCTCAATACTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IQCSFKNMSWGTTWFSTLPEAAS*APQYLA Trigger: AGCTAAGTATTGAGGTGCCCAGCTTGCAGCCTCAGG...CAAGGTTGAGAACCAAGTGGTCCCCCAACTCATGTTCTTAAAAGAGCACTGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR GCA 90 bp | ATCCAGTGCTCTTTTAAGAACATGAGTTGGGGGACCACTTGGTTCTCAACCTTGTGTCTGTTCCTCTTTTaGAGCTGTCCAAGTGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IQCSFKNMSWGTTWFSTLCLFLF*SCPSVP Trigger: GGGGACACTTGGACAGCTGCAAAAGAGGAACAGACA...CAAGGTTGAGAACCAAGTGGTCCCCCAACTCATGTTCTTAAAAGAGCACTGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR GCA 90 bp | CTTCTTCAGCTGTTCTCAGGCAGTTTTAGCTCCATCACCCAAATCCAGAGTCAGGTTTCTTCACAGCTTTaGTGTACACCTGCCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLQLFSGSFSSITQIQSQVSSQL*CTPASP Trigger: AGGAGAGGCAGGTGTACAGCAAAGCTGTGAAGAAAC...CTGACTCTGGATTTGGGTGATGGAGCTAAAACTGCCTGAGAACAGCTGAAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CCA 90 bp | GAACTCCTTTGTCTTCTTCAGCTGTTCTCAGGCAGTTTTAGCTCCATCACCCAAGACTTCGGTCCAGAATaGAGAGGCAGATGTTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ELLCLLQLFSGSFSSITQDFGPE*RGRCSG Trigger: TCCTGAACATCTGCCTCTCCATTCTGGACCGAAGTC...TTGGGTGATGGAGCTAAAACTGCCTGAGAACAGCTGAAGAAGACAAAGGAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR TCA 90 bp | AATGTGGTCAGGACATTTGAAGAGATGATAGAAAGGCAAGAAGTGGTGAGTTACGATGTCTGGGAACTGTaGGCTGACAAGGTCCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: NVVRTFEEMIERQEVVSYDVWEL*ADKVHL Trigger: CAGGTGGACCTTGTCAGCTCACAGTTCCCAGACATC...GTAACTCACCACTTCTTGCCTTTCTATCATCTCTTCAAATGTCCTGACCACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR GCA 90 bp | TGGTTCTCAACCTTGTTTCTGCTTTGTCTTATGGCTTCAGAAAGGCTCCTCTATAGAGTCACTGCCCACTaGCTTGGTACTGATGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: WFSTLFLLCLMASERLLYRVTAH*LGTDAP Trigger: AGGTGCATCAGTACCAAGGCAGTGGGCAGTGACTCT...ATAGAGGAGCCTTTCTGAAGCCATAAGACAAAGCAGAAACAAGGTTGAGAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CCA 90 bp | AACCTGAGACCCCTGTCTCTTATATGGGAGAAACAGACAGATGGACAAAGTCCTGTGAGACTGAATAACTaGCCTCTTCGAACCACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NLRPLSLIWEKQTDGQSPVRLNN*PLRTTS Trigger: ACTGGTGGTTCGAAGAGGCCAGTTATTCAGTCTCAC...AGGACTTTGTCCATCTGTCTGTTTCTCCCATATAAGAGACAGGGGTCTCAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR GCA 90 bp | TGGTTCTCAACCTTGTTTCTGCTTTGTCTTATGGCTTCAGAAAGGCTCCTCTATTTAAGCACGTACTCCTaGCTCTCTTCCTCTGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WFSTLFLLCLMASERLLYLSTYS*LSSSES Trigger: GGACTCAGAGGAAGAGAGGCAGGAGTACGTGCTTAA...ATAGAGGAGCCTTTCTGAAGCCATAAGACAAAGCAGAAACAAGGTTGAGAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR GCA 90 bp | AATGTGGTCAGGACATTTGAAGAGATGATAGAAAGGCAAGAAGTGGTGAGTTACTTCACGCAGGATCTCTaGCACAGGCTTGCGGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: NVVRTFEEMIERQEVVSYFTQDL*HRLAGI Trigger: TATACCCGCAAGCCTGTGGCAGAGATCCTGCGTGAA...GTAACTCACCACTTCTTGCCTTTCTATCATCTCTTCAAATGTCCTGACCACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CCA 90 bp | GAACATGAGTTGGGGGACCACTTGGTTCTCAACCTTGTTTCTGCTTTGTCTTATAACAGGAGAATAAACTaGCCCAGCTTTCGGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: EHELGDHLVLNLVSALSYNRRIN*PSFRSL Trigger: CAGTGACCGAAAGCTGGGCCAGTTTATTCTCCTGTT...ATAAGACAAAGCAGAAACAAGGTTGAGAACCAAGTGGTCCCCCAACTCATGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CCA 90 bp | GATTTATTTTATTTTAATTGCATGTGTTTGGGAGGAGGGTGTACATGCAGCAGGACCACTTCTGTAGGATaGCCACACTGCCACGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DLFYFNCMCLGGGCTCSRTTSVG*PHCHAS Trigger: ACTGGCGTGGCAGTGTGGCCATCCTACAGAAGTGGT...CCTGCTGCATGTACACCCTCCTCCCAAACACATGCAATTAAAATAAAATAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CCA 90 bp | AATGTGGTCAGGACATTTGAAGAGATGATAGAAAGGCAAGAAGTGGTGAGTTACCTGGCCATATTTGACTaGCTTGTACCTGCCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NVVRTFEEMIERQEVVSYLAIFD*LVPALE Trigger: TTCAAGGGCAGGTACAAGCCAGTCAAATATGGCCAG...GTAACTCACCACTTCTTGCCTTTCTATCATCTCTTCAAATGTCCTGACCACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR TCA 90 bp | GGTTCTCAACCTTGTTTCTGCTTTGTCTTATGGCTTCAGAAAGGCTCCTCTATAGAGAGTAAGATATTGTaGCTGGGATCTTCTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSQPCFCFVLWLQKGSSIESKIL*LGSSFL Trigger: AAGAAAAGAAGATCCCAGTCACAATATCTTACTCTC...TATAGAGGAGCCTTTCTGAAGCCATAAGACAAAGCAGAAACAAGGTTGAGAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| 3UTR CAA 72 bp | CAGAGTCAGTGTTTCCACATAGGGAAGAATCTCCTGTaGCTTAAAATCCAGTGCTCTTTTAAGAACATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QSQCFHIGKNLL*LKIQCSFKNMS Trigger: ACTCATGTTCTTAAAAGAGCACTGGATTTTAAGCAACAGGAGATTCTTCCCTATGTGGAAACACTGACTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS GCA 90 bp | CCGGTTCCAGGAGGTCGTCGCGCCAGACACCGCGCACGCTGGCCCTaGGGATCCGCCTCCTCCTCCCCCAGGCTTCCACACTTAGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PVPGGRRARHRARWP*GSASSSPRLPHLAV Trigger: AACTGCTAAGTGTGGAAGCCTGGGGGAGGAGGAGGCGGATCCGCAGGGCCAGCGTGCGCGGTGTCTGGCGCGACGACCTCCTGGAACCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS CCA 90 bp | GCCCTGGCGGTGAGGTTGGTCAAGCACAGAGCCAGCTTCAGGTCCTaGCCGAGCACCGGTGGCTCCAGCACTTTGAACTTGCCAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ALAVRLVKHRASFRS*PSTGGSSTLNLPVM Trigger: CATCACTGGCAAGTTCAAAGTGCTGGAGCCACCGGTGCTCGGCCAGGACCTGAAGCTGGCTCTGTGCTTGACCAACCTCACCGCCAGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS CCA 90 bp | CCTGGTGACATAGACTGGGTCATGGCGGTGGGACACATCGGTGGCTaGGTCCTCCTGGTGACTAGGACTTCGGTCCAGAATGGAGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGDIDWVMAVGHIGG*VLLVTRTSVQNGEA Trigger: TGCCTCTCCATTCTGGACCGAAGTCCTAGTCACCAGGAGGACCCAGCCACCGATGTGTCCCACCGCCATGACCCAGTCTATGTCACCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS TCA 90 bp | ACTGGGTCATGGCGGTGGGACACATCGGTGGCTGGGTCCTCCTGGTaGCTAGGACTTCGGTCCAGAATGGAGAGGCAGATGTTCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: TGSWRWDTSVAGSSW*LGLRSRMERQMFRM Trigger: CATCCTGAACATCTGCCTCTCCATTCTGGACCGAAGTCCTAGTCACCAGGAGGACCCAGCCACCGATGTGTCCCACCGCCATGACCCAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CAA 90 bp | TTTGGGAGGAGGGTGTACATGCAGCAGGTAAGTGTGGGTGCCCACAGAGACCAGCGGCCAATGACTGCATaGGAAGGGCTCGAGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FGRRVYMQQVSVGAHRDQRPMTA*EGLERL Trigger: CAGCCTCTCGAGCCCTTCCAATGCAGTCATTGGCCG...CTGGTCTCTGTGGGCACCCACACTTACCTGCTGCATGTACACCCTCCTCCCAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS TCA 90 bp | GGTCCACCTGCAGCTGCCTGGGGCCACTCTTGGAAGGGGTTATGTTaGATTGAATCAAGGCCTTCTCCTGAGGCTGCAAGCTGGGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: GPPAAAWGHSWKGLC*IESRPSPEAASWAP Trigger: AGGTGCCCAGCTTGCAGCCTCAGGAGAAGGCCTTGATTCAATTCAACATAACCCCTTCCAAGAGTGGCCCCAGGCAGCTGCAGGTGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS GCA 90 bp | CCTGCGGGAAGAGGGCCTGACACTCAGCAGGTATCGGCCAATGACTaGATTGGAAGGGCTCGAGAGGCTGACGGTGATTGTGTTCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PAGRGPDTQQVSAND*IGRAREADGDCVLC Trigger: ACAGAGAACACAATCACCGTCAGCCTCTCGAGCCCTTCCAATGCAGTCATTGGCCGATACCTGCTGAGTGTCAGGCCCTCTTCCCGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CAA 90 bp | GCTCTTGGGCCAGGGCTCTCAGAAATCTGGGACATGCCACTCTCCCAGCAGAAGGGTGGCTCCAGCACTTaGAACTTGCCAGTGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ALGPGLSEIWDMPLSQQKGGSST*NLPVML Trigger: CAGCATCACTGGCAAGTTCAAAGTGCTGGAGCCACC...CTTCTGCTGGGAGAGTGGCATGTCCCAGATTTCTGAGAGCCCTGGCCCAAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS TCA 90 bp | TGTAGCCACGTGGATGATCACAAAGCCCTTGATGTCTGGGAACTGTaGGCTGACAAGGTCCACCTGCAGCTGCCTGGGGCCACTCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: CSHVDDHKALDVWEL*ADKVHLQLPGATLG Trigger: TCCAAGAGTGGCCCCAGGCAGCTGCAGGTGGACCTTGTCAGCTCACAGTTCCCAGACATCAAGGGCTTTGTGATCATCCACGTGGCTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS GCA 90 bp | TCCACGCCTCGGAAGATGACGCCACTGTCGTTAAGCACGTACTCCTaGCTCTCTTCCTCTGAGTCCAGAAACACATCGTCCTCTGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: STPRKMTPLSLSTYS*LSSSESRNTSSSGH Trigger: GTGCCCAGAGGACGATGTGTTTCTGGACTCAGAGGAAGAGAGGCAGGAGTACGTGCTTAACGACAGTGGCGTCATCTTCCGAGGCGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS GCA 90 bp | CTGCCACGCCAGTTCAGTGGGTTGGTACCACCTCCATATTTGCCCTaGCACTGGCCTTGTACCACACCTCGGTCATTGTTGCTGTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: LPRQFSGLVPPPYLP*HWPCTTPRSLLLFT Trigger: GGTGAACAGCAACAATGACCGAGGTGTGGTACAAGGCCAGTGGCAGGGCAAATATGGAGGTGGTACCAACCCACTGAACTGGCGTGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS GCA 90 bp | CCACACTGCCACGCCAGTTCAGTGGGTTGGTACCACCTCCATATTTaGCCTGCCACTGGCCTTGTACCACACCTCGGTCATTGTTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PHCHASSVGWYHLHI*PATGLVPHLGHCCC Trigger: ACAGCAACAATGACCGAGGTGTGGTACAAGGCCAGTGGCAGGGCAAATATGGAGGTGGTACCAACCCACTGAACTGGCGTGGCAGTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CAA 90 bp | GCTCTTGGGCCAGGGCTCTCAGAAATCTGGGACATGCCACTCTCCCAGCAGAAGCTGTCTGTTCCTCTTTaGCAGCTGTCCAAGTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ALGPGLSEIWDMPLSQQKLSVPL*QLSKCP Trigger: GGGACACTTGGACAGCTGCAAAAGAGGAACAGACAG...CTTCTGCTGGGAGAGTGGCATGTCCCAGATTTCTGAGAGCCCTGGCCCAAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS CCA 90 bp | CGCCAGTTCAGTGGGTTGGTACCACCTCCATATTTGCCCTGCCACTaGCCTTGTACCACACCTCGGTCATTGTTGCTGTTCACCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RQFSGLVPPPYLPCH*PCTTPRSLLLFTMA Trigger: TGCCATGGTGAACAGCAACAATGACCGAGGTGTGGTACAAGGCCAGTGGCAGGGCAAATATGGAGGTGGTACCAACCCACTGAACTGGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CAA 90 bp | TCTATAATGGGGATGCTCCGGCTTGGAGAATTCTTGGGTCCAAATGTGGTCAGGACACGCTCCCGCCTCTaGTCCTCGTGCCATAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SIMGMLRLGEFLGPNVVRTRSRL*SSCHSQ Trigger: CTGGCTATGGCACGAGGACAAGAGGCGGGAGCGTGT...CCTGACCACATTTGGACCCAAGAATTCTCCAAGCCGGAGCATCCCCATTATAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS TCA 90 bp | GATGACGCCACTGTCGTTAAGCACGTACTCCTGCCTCTCTTCCTCTaGGTCCAGAAACACATCGTCCTCTGGGCACCAGGGATTGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: DDATVVKHVLLPLFL*VQKHIVLWAPGIEQ Trigger: CTGTTCAATCCCTGGTGCCCAGAGGACGATGTGTTTCTGGACTCAGAGGAAGAGAGGCAGGAGTACGTGCTTAACGACAGTGGCGTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS GCA 90 bp | TCCTCCTCCCCCAGGCTTCCACACTTAGCAGTTTCTTCACAGCTTTaGTGTACACCTGCCTCTCCTTCCGGGACCCTTCTGGATACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSSPRLPHLAVSSQL*CTPASPSGTLLDTC Trigger: ACAAGTATCCAGAAGGGTCCCGGAAGGAGAGGCAGGTGTACAGCAAAGCTGTGAAGAAACTGCTAAGTGTGGAAGCCTGGGGGAGGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CAA 90 bp | TTTGGGAGGAGGGTGTACATGCAGCAGGTAAGTGTGGGTGCCCACAGAGACCAGGCCAACAGGATCTTCTaGTCTTCTGTCAGGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FGRRVYMQQVSVGAHRDQANRIF*SSVRSP Trigger: AGGAGACCTGACAGAAGACAAGAAGATCCTGTTGGC...CTGGTCTCTGTGGGCACCCACACTTACCTGCTGCATGTACACCCTCCTCCCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CAA 90 bp | AGGGTGTACATGCAGCAGGTAAGTGTGGGTGCCCACAGAGACCAGAAATGTTGGACCACACCTCGGTCATaGTTGCTGTTCACCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RVYMQQVSVGAHRDQKCWTTPRS*LLFTMA Trigger: TGCCATGGTGAACAGCAACAATGACCGAGGTGTGGT...CCAACATTTCTGGTCTCTGTGGGCACCCACACTTACCTGCTGCATGTACACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CAA 90 bp | CAACCTGAGACCCCTGTCTCTTATATGGGAGAAACAGACAGATGGACAAAGTCCTCACTGCCCACTGCCTaGGTACTGATGCACCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: QPETPVSYMGETDRWTKSSLPTA*VLMHLP Trigger: CGGCAGGTGCATCAGTACCAAGGCAGTGGGCAGTGA...GGACTTTGTCCATCTGTCTGTTTCTCCCATATAAGAGACAGGGGTCTCAGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CAA 90 bp | CAACCTGAGACCCCTGTCTCTTATATGGGAGAAACAGACAGATGGACAAAGTCCGCTGGCCCCAGCACCTaGATGGTGATGAAGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QPETPVSYMGETDRWTKSAGPST*MVMKSS Trigger: GGAGGACTTCATCACCATCAAGGTGCTGGGGCCAGC...GGACTTTGTCCATCTGTCTGTTTCTCCCATATAAGAGACAGGGGTCTCAGGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS-3UTR CAA 90 bp | GCTCTTGGGCCAGGGCTCTCAGAAATCTGGGACATGCCACTCTCCCAGCAGAAGAGGGGTTATGTTGAATaGAATCAAGGCCTTCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ALGPGLSEIWDMPLSQQKRGYVE*NQGLLL Trigger: CAGGAGAAGGCCTTGATTCAATTCAACATAACCCCT...CTTCTGCTGGGAGAGTGGCATGTCCCAGATTTCTGAGAGCCCTGGCCCAAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CAA 90 bp | CTCTCAGAAATCTGGGACATGCCACTCTCCCAGCAGAAGGGTGACAAGAGTTGGCCATATTTGACTGGCTaGTACCTGCCCTTGAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LSEIWDMPLSQQKGDKSWPYLTG*YLPLNH Trigger: GTGGTTCAAGGGCAGGTACAAGCCAGTCAAATATGG...CCAACTCTTGTCACCCTTCTGCTGGGAGAGTGGCATGTCCCAGATTTCTGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CAA 90 bp | CAACCTGAGACCCCTGTCTCTTATATGGGAGAAACAGACAGATGGACAAAGTCCTGGGCTGAGTTGAAGTaGGACACCACCCTGGTTGCG | + |
|
Preference number: 5 (lower is better) Translates to: QPETPVSYMGETDRWTKSWAELK*DTTLVA Trigger: CGCAACCAGGGTGGTGTCCAACTTCAACTCAGCCCA...GGACTTTGTCCATCTGTCTGTTTCTCCCATATAAGAGACAGGGGTCTCAGGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS-3UTR CAA 90 bp | CCTCTAGAAGATCAGAAAGTACTCTTAACAGCTGAGCCATCTCTGCAATTCCCTGCCCTGCCACTGGCCTaGTACCACACCTCGGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: PLEDQKVLLTAEPSLQFPALPLA*YHTSVI Trigger: AATGACCGAGGTGTGGTACAAGGCCAGTGGCAGGGC...AGGGAATTGCAGAGATGGCTCAGCTGTTAAGAGTACTTTCTGATCTTCTAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CAA 90 bp | CAACCTGAGACCCCTGTCTCTTATATGGGAGAAACAGACAGATGGACAAAGTCCACACCTCGGTCATTGTaGCTGTTCACCATGGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: QPETPVSYMGETDRWTKSTPRSL*LFTMAL Trigger: CAGTGCCATGGTGAACAGCAACAATGACCGAGGTGT...GGACTTTGTCCATCTGTCTGTTTCTCCCATATAAGAGACAGGGGTCTCAGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS-3UTR CAA 90 bp | GGTTCTCAACCTTGTTTCTGCTTTGTCTTATGGCTTCAGAAAGGCTCCTCTATAAGAGCAAGGGTAATCTaGGGTGTGGTGGGCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: GSQPCFCFVLWLQKGSSIRARVI*GVVGST Trigger: GGTGCTGCCCACCACACCCAAGATTACCCTTGCTCT...TATAGAGGAGCCTTTCTGAAGCCATAAGACAAAGCAGAAACAAGGTTGAGAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS-3UTR CAA 90 bp | TGGTTCTCAACCTTGTTTCTGCTTTGTCTTATGGCTTCAGAAAGGCTCCTCTATGTGTCGTGGGCTGAGTaGAAGTTGGACACCACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: WFSTLFLLCLMASERLLYVSWAE*KLDTTL Trigger: CAGGGTGGTGTCCAACTTCAACTCAGCCCACGACAC...ATAGAGGAGCCTTTCTGAAGCCATAAGACAAAGCAGAAACAAGGTTGAGAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS-3UTR CAA 90 bp | GGTTCTCAACCTTGTTTCTGCTTTGTCTTATGGCTTCAGAAAGGCTCCTCTATAGTACCACCTCCATATTaGCCCTGCCACTGGCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GSQPCFCFVLWLQKGSSIVPPPY*PCHWPC Trigger: ACAAGGCCAGTGGCAGGGCAAATATGGAGGTGGTAC...TATAGAGGAGCCTTTCTGAAGCCATAAGACAAAGCAGAAACAAGGTTGAGAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS-3UTR CAA 90 bp | CCTCTAGAAGATCAGAAAGTACTCTTAACAGCTGAGCCATCTCTGCAATTCCCTTGCCTGGGGCCACTCTaGGAAGGGGTTATGTTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PLEDQKVLLTAEPSLQFPCLGPL*EGVMLN Trigger: ATTCAACATAACCCCTTCCAAGAGTGGCCCCAGGCA...AGGGAATTGCAGAGATGGCTCAGCTGTTAAGAGTACTTTCTGATCTTCTAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS-3UTR CAA 90 bp | AATGTGGTCAGGACATTTGAAGAGATGATAGAAAGGCAAGAAGTGGTGAGTTACGTCTGGAATACGGCTTaGGTGTGGAGAGCCTCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NVVRTFEEMIERQEVVSYVWNTA*VWRASD Trigger: ATCCGAGGCTCTCCACACCAAAGCCGTATTCCAGAC...GTAACTCACCACTTCTTGCCTTTCTATCATCTCTTCAAATGTCCTGACCACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS-3UTR CAA 90 bp | AATGTGGTCAGGACATTTGAAGAGATGATAGAAAGGCAAGAAGTGGTGAGTTACCAGCACTGGCCATATTaGACTGGCTTGTACCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: NVVRTFEEMIERQEVVSYQHWPY*TGLYLP Trigger: GGGCAGGTACAAGCCAGTCAAATATGGCCAGTGCTG...GTAACTCACCACTTCTTGCCTTTCTATCATCTCTTCAAATGTCCTGACCACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS-3UTR CAA 90 bp | AATGTGGTCAGGACATTTGAAGAGATGATAGAAAGGCAAGAAGTGGTGAGTTACGGCTTGTACCTGCCCTaGAACCACTTCTGTAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: NVVRTFEEMIERQEVVSYGLYLP*NHFCRM Trigger: CATCCTACAGAAGTGGTTCAAGGGCAGGTACAAGCC...GTAACTCACCACTTCTTGCCTTTCTATCATCTCTTCAAATGTCCTGACCACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS-3UTR CAA 90 bp | CCTCTAGAAGATCAGAAAGTACTCTTAACAGCTGAGCCATCTCTGCAATTCCCTATGATCACAAAGCCCTaGATGTCTGGGAACTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PLEDQKVLLTAEPSLQFPMITKP*MSGNCE Trigger: CTCACAGTTCCCAGACATCAAGGGCTTTGTGATCAT...AGGGAATTGCAGAGATGGCTCAGCTGTTAAGAGTACTTTCTGATCTTCTAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS-3UTR CAA 90 bp | AATGTGGTCAGGACATTTGAAGAGATGATAGAAAGGCAAGAAGTGGTGAGTTACAGTTTCTTCACAGCTTaGCTGTACACCTGCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NVVRTFEEMIERQEVVSYSFFTA*LYTCLS Trigger: GGAGAGGCAGGTGTACAGCAAAGCTGTGAAGAAACT...GTAACTCACCACTTCTTGCCTTTCTATCATCTCTTCAAATGTCCTGACCACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS CCA 72 bp | AGGATGGTGGCGCCGCTCACATTGACTCGGACCCGCTaGGCCCTGGCGGTGAGGTTGGTCAAGCACAGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RMVAPLTLTRTR*ALAVRLVKHRA Trigger: GGCTCTGTGCTTGACCAACCTCACCGCCAGGGCCCAGCGGGTCCGAGTCAATGTGAGCGGCGCCACCATCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS CAA 90 bp | AGCACCGGTGGCTCCAGCACTTTGAACTTGCCAGTGATGCTGGGTTaGGTGACCGGTTCCAGGAGGTCGTCGCGCCAGACACCGCGCACG | + |
|
Preference number: 6 (lower is better) Translates to: STGGSSTLNLPVMLG*VTGSRRSSRQTPRT Trigger: CGTGCGCGGTGTCTGGCGCGACGACCTCCTGGAACCGGTCACCAAACCCAGCATCACTGGCAAGTTCAAAGTGCTGGAGCCACCGGTGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS GCA 72 bp | CCCCAGCTTCACGGTGTGGGATTCACGCAGGATCTCTaGCACAGGCTTGCGGGTATAGAGGATGGTGGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: PQLHGVGFTQDL*HRLAGIEDGGA Trigger: GGCGCCACCATCCTCTATACCCGCAAGCCTGTGGCAGAGATCCTGCGTGAATCCCACACCGTGAAGCTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS TCA 72 bp | TGGCGGTGGGACACATCGGTGGCTGGGTCCTCCTGGTaGCTAGGACTTCGGTCCAGAATGGAGAGGCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: WRWDTSVAGSSW*LGLRSRMERQM Trigger: CATCTGCCTCTCCATTCTGGACCGAAGTCCTAGTCACCAGGAGGACCCAGCCACCGATGTGTCCCACCGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS CAA 72 bp | CCCACTGCCTTGGTACTGATGCACCTGCCGATCTTCTaGGTGTCCGAGTACACACGCTCCCGCCTCTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PTALVLMHLPIF*VSEYTRSRLLS Trigger: GGACAAGAGGCGGGAGCGTGTGTACTCGGACACCAAGAAGATCGGCAGGTGCATCAGTACCAAGGCAGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS CAA 72 bp | GGCTCCAGCACTTTGAACTTGCCAGTGATGCTGGGTTaGGTGACCGGTTCCAGGAGGTCGTCGCGCCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: GSSTLNLPVMLG*VTGSRRSSRQT Trigger: TGTCTGGCGCGACGACCTCCTGGAACCGGTCACCAAACCCAGCATCACTGGCAAGTTCAAAGTGCTGGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS CAA 90 bp | GAGTCACTGCCCACTGCCTTGGTACTGATGCACCTGCCGATCTTCTaGGTGTCCGAGTACACACGCTCCCGCCTCTTGTCCTCGTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: ESLPTALVLMHLPIF*VSEYTRSRLLSSCH Trigger: ATGGCACGAGGACAAGAGGCGGGAGCGTGTGTACTCGGACACCAAGAAGATCGGCAGGTGCATCAGTACCAAGGCAGTGGGCAGTGACTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS CAA 90 bp | GCCACACTGCCACGCCAGTTCAGTGGGTTGGTACCACCTCCATATTaGCCCTGCCACTGGCCTTGTACCACACCTCGGTCATTGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ATLPRQFSGLVPPPY*PCHWPCTTPRSLLL Trigger: CAGCAACAATGACCGAGGTGTGGTACAAGGCCAGTGGCAGGGCAAATATGGAGGTGGTACCAACCCACTGAACTGGCGTGGCAGTGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS TCA 72 bp | GTGGATGATCACAAAGCCCTTGATGTCTGGGAACTGTaGGCTGACAAGGTCCACCTGCAGCTGCCTGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VDDHKALDVWEL*ADKVHLQLPGA Trigger: GGCCCCAGGCAGCTGCAGGTGGACCTTGTCAGCTCACAGTTCCCAGACATCAAGGGCTTTGTGATCATCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS GCA 72 bp | TGTCTGGAATACGGCTTTGGTGTGGAGAGCCTCGGATaGGTGAGGTCCTGTCTCCACGGTGAAGATGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: CLEYGFGVESLG*VRSCLHGEDEG Trigger: GCCCTCATCTTCACCGTGGAGACAGGACCTCACGCATCCGAGGCTCTCCACACCAAAGCCGTATTCCAGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS CCA 72 bp | GTAGGATGGCCACACTGCCACGCCAGTTCAGTGGGTTaGTACCACCTCCATATTTGCCCTGCCACTGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VGWPHCHASSVG*YHLHICPATGL Trigger: AAGGCCAGTGGCAGGGCAAATATGGAGGTGGTACCAACCCACTGAACTGGCGTGGCAGTGTGGCCATCCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS CAA 72 bp | CCACGCCAGTTCAGTGGGTTGGTACCACCTCCATATTaGCCCTGCCACTGGCCTTGTACCACACCTCGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PRQFSGLVPPPY*PCHWPCTTPRS Trigger: TGACCGAGGTGTGGTACAAGGCCAGTGGCAGGGCAAATATGGAGGTGGTACCAACCCACTGAACTGGCGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS CAA 72 bp | TGTAGGATGGCCACACTGCCACGCCAGTTCAGTGGGTaGGTACCACCTCCATATTTGCCCTGCCACTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: CRMATLPRQFSG*VPPPYLPCHWP Trigger: AGGCCAGTGGCAGGGCAAATATGGAGGTGGTACCAACCCACTGAACTGGCGTGGCAGTGTGGCCATCCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS CAA 90 bp | CGGGAAGAGGGCCTGACACTCAGCAGGTATCGGCCAATGACTGCATaGGAAGGGCTCGAGAGGCTGACGGTGATTGTGTTCTCTGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: REEGLTLSRYRPMTA*EGLERLTVIVFSVC Trigger: ACAGACAGAGAACACAATCACCGTCAGCCTCTCGAGCCCTTCCAATGCAGTCATTGGCCGATACCTGCTGAGTGTCAGGCCCTCTTCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS GCA 72 bp | AGAGGGCCTGACACTCAGCAGGTATCGGCCAATGACTaGATTGGAAGGGCTCGAGAGGCTGACGGTGATTGT | + |
|
Preference number: 6 (lower is better) Translates to: RGPDTQQVSAND*IGRAREADGDC Trigger: ACAATCACCGTCAGCCTCTCGAGCCCTTCCAATGCAGTCATTGGCCGATACCTGCTGAGTGTCAGGCCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS GCA 72 bp | CACGCCAGTTCAGTGGGTTGGTACCACCTCCATATTTaGCCTGCCACTGGCCTTGTACCACACCTCGGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: HASSVGWYHLHI*PATGLVPHLGH Trigger: ATGACCGAGGTGTGGTACAAGGCCAGTGGCAGGGCAAATATGGAGGTGGTACCAACCCACTGAACTGGCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
||
| CDS GCA 72 bp | TTGATGTCTGGGAACTGTGAGCTGACAAGGTCCACCTaGAGCTGCCTGGGGCCACTCTTGGAAGGGGTTATG | + |
|
Preference number: 6 (lower is better) Translates to: LMSGNCELTRST*SCLGPLLEGVM Trigger: CATAACCCCTTCCAAGAGTGGCCCCAGGCAGCTGCAGGTGGACCTTGTCAGCTCACAGTTCCCAGACATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS CCA 72 bp | GGCTGCAAGCTGGGCACCTCAATACTTAGCTGTCCTTaGAGAAGGCCACTGCCCTCTACCATCAGCACACAG | + |
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Preference number: 6 (lower is better) Translates to: GCKLGTSILSCP*RRPLPSTISTQ Trigger: CTGTGTGCTGATGGTAGAGGGCAGTGGCCTTCTCCAAGGACAGCTAAGTATTGAGGTGCCCAGCTTGCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS CAA 72 bp | GGCCTGACACTCAGCAGGTATCGGCCAATGACTGCATaGGAAGGGCTCGAGAGGCTGACGGTGATTGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: GLTLSRYRPMTA*EGLERLTVIVF Trigger: GAACACAATCACCGTCAGCCTCTCGAGCCCTTCCAATGCAGTCATTGGCCGATACCTGCTGAGTGTCAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS CAA 90 bp | CTCCTCCTCCCCCAGGCTTCCACACTTAGCAGTTTCTTCACAGCTTaGCTGTACACCTGCCTCTCCTTCCGGGACCCTTCTGGATACTTG | + |
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Preference number: 6 (lower is better) Translates to: LLLPQASTLSSFFTA*LYTCLSFRDPSGYL Trigger: CAAGTATCCAGAAGGGTCCCGGAAGGAGAGGCAGGTGTACAGCAAAGCTGTGAAGAAACTGCTAAGTGTGGAAGCCTGGGGGAGGAGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS CAA 90 bp | CACCTGCAGCTGCCTGGGGCCACTCTTGGAAGGGGTTATGTTGAATaGAATCAAGGCCTTCTCCTGAGGCTGCAAGCTGGGCACCTCAAT | + |
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Preference number: 6 (lower is better) Translates to: HLQLPGATLGRGYVE*NQGLLLRLQAGHLN Trigger: ATTGAGGTGCCCAGCTTGCAGCCTCAGGAGAAGGCCTTGATTCAATTCAACATAACCCCTTCCAAGAGTGGCCCCAGGCAGCTGCAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS GCA 72 bp | CCCAGGCTTCCACACTTAGCAGTTTCTTCACAGCTTTaGTGTACACCTGCCTCTCCTTCCGGGACCCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: PRLPHLAVSSQL*CTPASPSGTLL Trigger: CAGAAGGGTCCCGGAAGGAGAGGCAGGTGTACAGCAAAGCTGTGAAGAAACTGCTAAGTGTGGAAGCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS GCA 72 bp | CACCAAGACTTCCACAGTGACTGTCACTCCTACCACTaGTGGCCCCAGCACCTTGATGGTGATGAAGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: HQDFHSDCHSYH*WPQHLDGDEVL Trigger: GAGGACTTCATCACCATCAAGGTGCTGGGGCCAGCAGTGGTAGGAGTGACAGTCACTGTGGAAGTCTTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS CCA 72 bp | ATCTTCTTTTCTTCTAGTGGCCCCAGCTTCACGGTGTaGGATTCACGCAGGATCTCTGCCACAGGCTTGCGG | + |
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Preference number: 6 (lower is better) Translates to: IFFSSSGPSFTV*DSRRISATGLR Trigger: CCGCAAGCCTGTGGCAGAGATCCTGCGTGAATCCCACACCGTGAAGCTGGGGCCACTAGAAGAAAAGAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS CAA 72 bp | CCCCAGGCTTCCACACTTAGCAGTTTCTTCACAGCTTaGCTGTACACCTGCCTCTCCTTCCGGGACCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: PQASTLSSFFTA*LYTCLSFRDPS Trigger: AGAAGGGTCCCGGAAGGAGAGGCAGGTGTACAGCAAAGCTGTGAAGAAACTGCTAAGTGTGGAAGCCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS CAA 90 bp | CCCTCTACCATCAGCACACAGTCCTTTACGCTCTCCGAGAGGGGGTaGATCACCAAGACTTCCACAGTGACTGTCACTCCTACCACTGCT | + |
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Preference number: 6 (lower is better) Translates to: PSTISTQSFTLSERG*ITKTSTVTVTPTTA Trigger: AGCAGTGGTAGGAGTGACAGTCACTGTGGAAGTCTTGGTGATCAACCCCCTCTCGGAGAGCGTAAAGGACTGTGTGCTGATGGTAGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS GCA 72 bp | CGGAAGATGACGCCACTGTCGTTAAGCACGTACTCCTaGCTCTCTTCCTCTGAGTCCAGAAACACATCGTCC | + |
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Preference number: 6 (lower is better) Translates to: RKMTPLSLSTYS*LSSSESRNTSS Trigger: GGACGATGTGTTTCTGGACTCAGAGGAAGAGAGGCAGGAGTACGTGCTTAACGACAGTGGCGTCATCTTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS GCA 72 bp | CAGTTCAGTGGGTTGGTACCACCTCCATATTTGCCCTaGCACTGGCCTTGTACCACACCTCGGTCATTGTTG | + |
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Preference number: 6 (lower is better) Translates to: QFSGLVPPPYLP*HWPCTTPRSLL Trigger: CAACAATGACCGAGGTGTGGTACAAGGCCAGTGGCAGGGCAAATATGGAGGTGGTACCAACCCACTGAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS CCA 72 bp | AGTGGGTTGGTACCACCTCCATATTTGCCCTGCCACTaGCCTTGTACCACACCTCGGTCATTGTTGCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: SGLVPPPYLPCH*PCTTPRSLLLF Trigger: GAACAGCAACAATGACCGAGGTGTGGTACAAGGCCAGTGGCAGGGCAAATATGGAGGTGGTACCAACCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS CAA 72 bp | CACTTGGCTGTAGCCACGTGGATGATCACAAAGCCCTaGATGTCTGGGAACTGTGAGCTGACAAGGTCCACC | + |
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Preference number: 6 (lower is better) Translates to: HLAVATWMITKP*MSGNCELTRST Trigger: GGTGGACCTTGTCAGCTCACAGTTCCCAGACATCAAGGGCTTTGTGATCATCCACGTGGCTACAGCCAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS CAA 90 bp | GTTCAGTGGGTTGGTACCACCTCCATATTTGCCCTGCCACTGGCCTaGTACCACACCTCGGTCATTGTTGCTGTTCACCATGGCACTGAT | + |
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Preference number: 6 (lower is better) Translates to: VQWVGTTSIFALPLA*YHTSVIVAVHHGTD Trigger: ATCAGTGCCATGGTGAACAGCAACAATGACCGAGGTGTGGTACAAGGCCAGTGGCAGGGCAAATATGGAGGTGGTACCAACCCACTGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS CAA 72 bp | GCCTCTTCGAACCACCAGTTCAGAGCAAGGGTAATCTaGGGTGTGGTGGGCAGCACCATTTTTCGAATGCTG | + |
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Preference number: 6 (lower is better) Translates to: ASSNHQFRARVI*GVVGSTIFRML Trigger: CAGCATTCGAAAAATGGTGCTGCCCACCACACCCAAGATTACCCTTGCTCTGAACTGGTGGTTCGAAGAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS CAA 72 bp | GTTGGTACCACCTCCATATTTGCCCTGCCACTGGCCTaGTACCACACCTCGGTCATTGTTGCTGTTCACCAT | + |
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Preference number: 6 (lower is better) Translates to: VGTTSIFALPLA*YHTSVIVAVHH Trigger: ATGGTGAACAGCAACAATGACCGAGGTGTGGTACAAGGCCAGTGGCAGGGCAAATATGGAGGTGGTACCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS CAA 72 bp | ATCAGCACACAGTCCTTTACGCTCTCCGAGAGGGGGTaGATCACCAAGACTTCCACAGTGACTGTCACTCCT | + |
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Preference number: 6 (lower is better) Translates to: ISTQSFTLSERG*ITKTSTVTVTP Trigger: AGGAGTGACAGTCACTGTGGAAGTCTTGGTGATCAACCCCCTCTCGGAGAGCGTAAAGGACTGTGTGCTGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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| CDS TCA 72 bp | CTGTCAGGTCTCCTTTGTACTGAGAGTAAGATATTGTaGCTGGGATCTTCTTTTCTTCTAGTGGCCCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LSGLLCTESKIL*LGSSFLLVAPA Trigger: AGCTGGGGCCACTAGAAGAAAAGAAGATCCCAGTCACAATATCTTACTCTCAGTACAAAGGAGACCTGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028888.5 |
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