Pregenerated sensors for TGM3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027401Ensembl transcript IDs: ENSMUST00000110299.3
Found 204 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTTGGGGGACTTGCTAGAAGTCCATGTCTGGCAGCCTTGGGGACATaGAGGGCTTCTCAGGCTGGACAGCATAGGCAACAGTTTCACTCC | + |
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Preference number: 1 (lower is better) Translates to: VGGLARSPCLAALGT*RASQAGQHRQQFHS Trigger: GGAGTGAAACTGTTGCCTATGCTGTCCAGCCTGAGAAGCCCTCCATGTCCCCAAGGCTGCCAGACATGGACTTCTAGCAAGTCCCCCAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR GCA 90 bp | GGGTTCACAGAACAGGCCGTCTCCAAGGGAAGCAATCAGGAAATGTaGAAAACTGATCAAGTCCCAGACCAGGAGGGACCTGGCCTAGCT | + |
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Preference number: 1 (lower is better) Translates to: GFTEQAVSKGSNQEM*KTDQVPDQEGPGLA Trigger: AGCTAGGCCAGGTCCCTCCTGGTCTGGGACTTGATCAGTTTTGCACATTTCCTGATTGCTTCCCTTGGAGACGGCCTGTTCTGTGAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR GCA 90 bp | TCCCTGCCTTCCATAGAGGCTGAGGGAGGAACAGGGTATCCATTTTaGAGGCTGGGATCAGCAAGCAGTCTAGGCTGCCTTCTTCCCAAT | + |
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Preference number: 1 (lower is better) Translates to: SLPSIEAEGGTGYPF*RLGSASSLGCLLPN Trigger: ATTGGGAAGAAGGCAGCCTAGACTGCTTGCTGATCCCAGCCTGCAAAATGGATACCCTGTTCCTCCCTCAGCCTCTATGGAAGGCAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR TCA 90 bp | GCCCCTCGCCCTCAGGCAAAGCAGCCGGTTGGAACTGGTGGTGTATaGTTGCACTTGTTTGGCATTTATTTTGACTGTAAGGGTGCGAGT | + |
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Preference number: 1 (lower is better) Translates to: APRPQAKQPVGTGGV*LHLFGIYFDCKGAS Trigger: ACTCGCACCCTTACAGTCAAAATAAATGCCAAACAAGTGCAATCATACACCACCAGTTCCAACCGGCTGCTTTGCCTGAGGGCGAGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR TCA 90 bp | TTGCCCTTGAAGCCGCAAAGGGCTAACACATTTCCTGTGGACATCTaGGCCAATGGACAAGGCCTTCCTGAATCTGGGCTTTCTCTAGAG | + |
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Preference number: 1 (lower is better) Translates to: LPLKPQRANTFPVDI*ANGQGLPESGLSLE Trigger: CTCTAGAGAAAGCCCAGATTCAGGAAGGCCTTGTCCATTGGCTCAGATGTCCACAGGAAATGTGTTAGCCCTTTGCGGCTTCAAGGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR GCA 90 bp | CTCGCCCTCAGGCAAAGCAGCCGGTTGGAACTGGTGGTGTATGATTaGACTTGTTTGGCATTTATTTTGACTGTAAGGGTGCGAGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: LALRQSSRLELVVYD*TCLAFILTVRVRVV Trigger: CACCACTCGCACCCTTACAGTCAAAATAAATGCCAAACAAGTGCAATCATACACCACCAGTTCCAACCGGCTGCTTTGCCTGAGGGCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR TCA 90 bp | CAGGTGTGTGCTCAGTTGCTGGGGGTTATTTCAACAGGCAAATGCTaGGGCATTGTGTTTGAGTTTGTTGAGGGCAACAGTGCTGTAGCT | + |
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Preference number: 1 (lower is better) Translates to: QVCAQLLGVISTGKC*GIVFEFVEGNSAVA Trigger: AGCTACAGCACTGTTGCCCTCAACAAACTCAAACACAATGCCTCAGCATTTGCCTGTTGAAATAACCCCCAGCAACTGAGCACACACCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR GCA 90 bp | TTGTCACAACTTCCCAAGAGCTGGGAATGCAGGTGTGTGCTCAGTTaGTGGGGGTTATTTCAACAGGCAAATGCTGAGGCATTGTGTTTG | + |
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Preference number: 1 (lower is better) Translates to: LSQLPKSWECRCVLS*WGLFQQANAEALCL Trigger: CAAACACAATGCCTCAGCATTTGCCTGTTGAAATAACCCCCAGCAACTGAGCACACACCTGCATTCCCAGCTCTTGGGAAGTTGTGACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR CCA 90 bp | TCACAACTTCCCAAGAGCTGGGAATGCAGGTGTGTGCTCAGTTGCTaGGGGTTATTTCAACAGGCAAATGCTGAGGCATTGTGTTTGAGT | + |
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Preference number: 1 (lower is better) Translates to: SQLPKSWECRCVLSC*GLFQQANAEALCLS Trigger: ACTCAAACACAATGCCTCAGCATTTGCCTGTTGAAATAACCCCCAGCAACTGAGCACACACCTGCATTCCCAGCTCTTGGGAAGTTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR TCA 90 bp | CTCATGAACTGGAAGCCAAGTTCTCAGTGTGGTTATGTTAAGAGGTaGTGGAGAGTTTCAGGAAAGGGGTACCAGGCAGCCATTATGGGT | + |
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Preference number: 1 (lower is better) Translates to: LMNWKPSSQCGYVKR*WRVSGKGYQAAIMG Trigger: ACCCATAATGGCTGCCTGGTACCCCTTTCCTGAAACTCTCCATCACCTCTTAACATAACCACACTGAGAACTTGGCTTCCAGTTCATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR GCA 90 bp | GGGCCAACACAGCAGAGAACAGTCCTGTGTGGGCAGATCCCACTTTaGCTTAAGTGTCCTGAAAAATACTTGGAAGTTCTTTCTCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: GPTQQRTVLCGQIPL*LKCPEKYLEVLSLS Trigger: AGAAAGAGAAAGAACTTCCAAGTATTTTTCAGGACACTTAAGGCAAAGTGGGATCTGCCCACACAGGACTGTTCTCTGCTGTGTTGGCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR CCA 90 bp | TGTGTGGGCAGATCCCACTTTGCCTTAAGTGTCCTGAAAAATACTTaGAAGTTCTTTCTCTTTCTGAGACCTGCACAAAGGTCCCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: CVGRSHFALSVLKNT*KFFLFLRPAQRSQR Trigger: TCTTTGGGACCTTTGTGCAGGTCTCAGAAAGAGAAAGAACTTCCAAGTATTTTTCAGGACACTTAAGGCAAAGTGGGATCTGCCCACACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR TCA 90 bp | ATACACAGTTCTTATGAGACCCAGTGTTATGAGAATGGATTGTTGTaGCATAACAGCAGTGGCCCTACGTTCCTTTCTTCCTTTCTTGCC | + |
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Preference number: 1 (lower is better) Translates to: IHSSYETQCYENGLL*HNSSGPTFLSSFLA Trigger: GGCAAGAAAGGAAGAAAGGAACGTAGGGCCACTGCTGTTATGTCACAACAATCCATTCTCATAACACTGGGTCTCATAAGAACTGTGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR TCA 90 bp | GGGCCACAGAAAATGGGCCAACACAGCAGAGAACAGTCCTGTGTGGGCAGATCCGCCTTCCATAGAGGCTaGGGGAGGAACAGGGTATCC | + |
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Preference number: 2 (lower is better) Translates to: GPQKMGQHSREQSCVGRSAFHRG*GRNRVS Trigger: GGATACCCTGTTCCTCCCTCAGCCTCTATGGAAGGC...GGATCTGCCCACACAGGACTGTTCTCTGCTGTGTTGGCCCATTTTCTGTGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR CCA 90 bp | TCCCAAGAGCTGGGAATGCAGGTGTGTGCTCAGTTGCTGGGGGTTATTTCAACACATGTCTGGCAGCCTTaGGGACATGGAGGGCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: SQELGMQVCAQLLGVISTHVWQP*GHGGLL Trigger: GAGAAGCCCTCCATGTCCCCAAGGCTGCCAGACATG...TGTTGAAATAACCCCCAGCAACTGAGCACACACCTGCATTCCCAGCTCTTGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTTCACAGTCACCAGGGAGGCCTGAGCTGAGTATAAAGGGAGCAGGCTTTTCGGGACCCACAGGTTaGGAACTAGTGGCTCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: FPSQSPGRPELSIKGAGFSGPTG*ELVAQR Trigger: TCTCTGAGCCACTAGTTCTCAACCTGTGGGTCCCGA...AAAGCCTGCTCCCTTTATACTCAGCTCAGGCCTCCCTGGTGACTGTGAAGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR GCA 90 bp | GACAAACACAGGCTCTTCTGGCTACAGGGAGCAGAGCCTGGCCCAGGGGAGTGCAGCAATCAGGAAATGTaGAAAACTGATCAAGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: DKHRLFWLQGAEPGPGECSNQEM*KTDQVP Trigger: TGGGACTTGATCAGTTTTGCACATTTCCTGATTGCT...GCACTCCCCTGGGCCAGGCTCTGCTCCCTGTAGCCAGAAGAGCCTGTGTTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR CCA 90 bp | CCTTCACAGTCACCAGGGAGGCCTGAGCTGAGTATAAAGGGAGCAGGCTTTGGGCCCCTTCTTTGGATATaGTCCAGCCCCAGATATTTC | + |
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Preference number: 2 (lower is better) Translates to: PSQSPGRPELSIKGAGFGPLLWI*SSPRYF Trigger: GAAATATCTGGGGCTGGACCATATCCAAAGAAGGGG...CCCAAAGCCTGCTCCCTTTATACTCAGCTCAGGCCTCCCTGGTGACTGTGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGAGAACAGTCCTGTGTGGGCAGATCCCACTTTGCCTTAAGTGTCCTGAAGAGTGGTGTGGTATGTaGCTACTCCCTGCCTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: QQRTVLCGQIPLCLKCPEEWCGM*LLPAFH Trigger: ATGGAAGGCAGGGAGTAGTCACATACCACACCACTC...TTCAGGACACTTAAGGCAAAGTGGGATCTGCCCACACAGGACTGTTCTCTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR TCA 90 bp | AGTTTCAGGAAAGGGGTACCAGGCAGCCATTATGGGTACTGCTTTCCGGAGGGATTTCCTGTGGACATCTaGGCCAATGGACAAGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: SFRKGVPGSHYGYCFPEGFPVDI*ANGQGL Trigger: AAGGCCTTGTCCATTGGCTCAGATGTCCACAGGAAA...TCCCTCCGGAAAGCAGTACCCATAATGGCTGCCTGGTACCCCTTTCCTGAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTTCACAGTCACCAGGGAGGCCTGAGCTGAGTATAAAGGGAGCAGGCTTTAGGGGGTTTGAGTTTTaGCCGGAGGCTCATGAACTG | + |
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Preference number: 2 (lower is better) Translates to: FPSQSPGRPELSIKGAGFRGFEF*PEAHEL Trigger: CAGTTCATGAGCCTCCGGTCAAAACTCAAACCCCCT...AAAGCCTGCTCCCTTTATACTCAGCTCAGGCCTCCCTGGTGACTGTGAAGGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR CCA 90 bp | TTTCCTTCACAGTCACCAGGGAGGCCTGAGCTGAGTATAAAGGGAGCAGGCTTTCAACAGTGCTGTAGCTaGCTGACAAACACAGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: FPSQSPGRPELSIKGAGFQQCCS*LTNTGS Trigger: AGAGCCTGTGTTTGTCAGCCAGCTACAGCACTGTTG...AAAGCCTGCTCCCTTTATACTCAGCTCAGGCCTCCCTGGTGACTGTGAAGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR TCA 90 bp | CAGCAGAGAACAGTCCTGTGTGGGCAGATCCCACTTTGCCTTAAGTGTCCTGAAGGAAATGTGCAAAACTaGTCAAGTCCCAGACCAGGA | + |
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Preference number: 2 (lower is better) Translates to: QQRTVLCGQIPLCLKCPEGNVQN*SSPRPG Trigger: TCCTGGTCTGGGACTTGATCAGTTTTGCACATTTCC...TTCAGGACACTTAAGGCAAAGTGGGATCTGCCCACACAGGACTGTTCTCTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR TCA 90 bp | GGTTTGAGTTTTGACCGGAGGCTCATGAACTGGAAGCCAAGTTCTCAGTGTGGTCCTAAGCACACACAGTaGTTAGGGCAGAGGTTCTCA | + |
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Preference number: 2 (lower is better) Translates to: GLSFDRRLMNWKPSSQCGPKHTQ*LGQRFS Trigger: TGAGAACCTCTGCCCTAATCACTGTGTGTGCTTAGG...ACCACACTGAGAACTTGGCTTCCAGTTCATGAGCCTCCGGTCAAAACTCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR TCA 90 bp | TCCCAAGAGCTGGGAATGCAGGTGTGTGCTCAGTTGCTGGGGGTTATTTCAACAAGTTCTTTCTCTTTCTaGGACCTGCACAAAGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: SQELGMQVCAQLLGVISTSSFSF*DLHKGP Trigger: GGGACCTTTGTGCAGGTCTCAGAAAGAGAAAGAACT...TGTTGAAATAACCCCCAGCAACTGAGCACACACCTGCATTCCCAGCTCTTGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR CCA 90 bp | CCTTCACAGTCACCAGGGAGGCCTGAGCTGAGTATAAAGGGAGCAGGCTTTGGGTGCCTGAGACTATTTTaGTTGTTTGAGATAGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: PSQSPGRPELSIKGAGFGCLRLF*LFEIGS Trigger: AGACCCTATCTCAAACAACCAAAATAGTCTCAGGCA...CCCAAAGCCTGCTCCCTTTATACTCAGCTCAGGCCTCCCTGGTGACTGTGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTTCACAGTCACCAGGGAGGCCTGAGCTGAGTATAAAGGGAGCAGGCTTTCGTAGGCAATCTCTTTaGAAAGGTCACTCAATCCCT | + |
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Preference number: 2 (lower is better) Translates to: FPSQSPGRPELSIKGAGFRRQSL*KGHSIP Trigger: AGGGATTGAGTGACCTTTTCAAAGAGATTGCCTACG...AAAGCCTGCTCCCTTTATACTCAGCTCAGGCCTCCCTGGTGACTGTGAAGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR CCA 90 bp | AAGGGAGCAGGCTTTGGGCCAGATGTGAAGTGGCAATTTCTGTTTGGAATAGTTCTAGAAGTCCATGTCTaGCAGCCTTGGGGACATGGA | + |
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Preference number: 2 (lower is better) Translates to: KGAGFGPDVKWQFLFGIVLEVHV*QPWGHG Trigger: TCCATGTCCCCAAGGCTGCCAGACATGGACTTCTAG...AACTATTCCAAACAGAAATTGCCACTTCACATCTGGCCCAAAGCCTGCTCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR CCA 90 bp | AAGGGAGCAGGCTTTGGGCCAGATGTGAAGTGGCAATTTCTGTTTGGAATAGTTCAACTTCCCAAGAGCTaGGAATGCAGGTGTGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: KGAGFGPDVKWQFLFGIVQLPKS*ECRCVL Trigger: GAGCACACACCTGCATTCCCAGCTCTTGGGAAGTTG...AACTATTCCAAACAGAAATTGCCACTTCACATCTGGCCCAAAGCCTGCTCCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR CAA 90 bp | CGGTTGGAACTGGTGGTGTATGATTGCACTTGTTTGGCATTTATTTaGACTGTAAGGGTGCGAGTGGTGTGGTATGTGACTACTCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: RLELVVYDCTCLAFI*TVRVRVVWYVTTPC Trigger: GCAGGGAGTAGTCACATACCACACCACTCGCACCCTTACAGTCAAAATAAATGCCAAACAAGTGCAATCATACACCACCAGTTCCAACCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR CAA 90 bp | AGGCAAAGCAGCCGGTTGGAACTGGTGGTGTATGATTGCACTTGTTaGGCATTTATTTTGACTGTAAGGGTGCGAGTGGTGTGGTATGTG | + |
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Preference number: 2 (lower is better) Translates to: RQSSRLELVVYDCTC*AFILTVRVRVVWYV Trigger: CACATACCACACCACTCGCACCCTTACAGTCAAAATAAATGCCAAACAAGTGCAATCATACACCACCAGTTCCAACCGGCTGCTTTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR TCA 90 bp | TCCCAAGAGCTGGGAATGCAGGTGTGTGCTCAGTTGCTGGGGGTTATTTCAACAGGTTATGTTAAGAGGTaGTGGAGAGTTTCAGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: SQELGMQVCAQLLGVISTGYVKR*WRVSGK Trigger: CTTTCCTGAAACTCTCCATCACCTCTTAACATAACC...TGTTGAAATAACCCCCAGCAACTGAGCACACACCTGCATTCCCAGCTCTTGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR TCA 90 bp | GTTCTTTCTCTTTCTGAGACCTGCACAAAGGTCCCAAAGAGTTTCCTAAGCACATGGACAAGGCCTTCCTaGATCTGGGCTTTCTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: VLSLSETCTKVPKSFLSTWTRPS*IWAFSR Trigger: TCTAGAGAAAGCCCAGATTCAGGAAGGCCTTGTCCA...TGTGCTTAGGAAACTCTTTGGGACCTTTGTGCAGGTCTCAGAAAGAGAAAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR GCA 90 bp | CTCATTTCACTTGGGGCATTATGGCAAAGTTTTCTAGAACCAGCTGGCAGTGGTGCAAGCAGTCTAGGCTaGCTTCTTCCCAATTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: LISLGALWQSFLEPAGSGASSLG*LLPNLC Trigger: ACACAAATTGGGAAGAAGGCAGCCTAGACTGCTTGC...ACCACTGCCAGCTGGTTCTAGAAAACTTTGCCATAATGCCCCAAGTGAAATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR GCA 90 bp | AGTTTCAGGAAAGGGGTACCAGGCAGCCATTATGGGTACTGCTTTCCGGAGGGACTGGTGGTGTATGATTaGACTTGTTTGGCATTTATT | + |
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Preference number: 2 (lower is better) Translates to: SFRKGVPGSHYGYCFPEGLVVYD*TCLAFI Trigger: AATAAATGCCAAACAAGTGCAATCATACACCACCAG...TCCCTCCGGAAAGCAGTACCCATAATGGCTGCCTGGTACCCCTTTCCTGAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR CAA 90 bp | CTGTGTGGGCAGATCCCACTTTGCCTTAAGTGTCCTGAAAAATACTaGGAAGTTCTTTCTCTTTCTGAGACCTGCACAAAGGTCCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LCGQIPLCLKCPEKY*EVLSLSETCTKVPK Trigger: CTTTGGGACCTTTGTGCAGGTCTCAGAAAGAGAAAGAACTTCCAAGTATTTTTCAGGACACTTAAGGCAAAGTGGGATCTGCCCACACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR GCA 90 bp | GACATAACAGCAGTGGCCCTACGTTCCTTTCTTCCTTTCTTGCCATGTAACTCTTCTCTTTCTGAGACCTaGACAAAGGTCCCAAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: DITAVALRSFLPFLPCNSSLSET*TKVPKS Trigger: ACTCTTTGGGACCTTTGTGCAGGTCTCAGAAAGAGA...AGAGTTACATGGCAAGAAAGGAAGAAAGGAACGTAGGGCCACTGCTGTTATGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR CCA 90 bp | GACATAACAGCAGTGGCCCTACGTTCCTTTCTTCCTTTCTTGCCATGTAACTCTCTAACACATTTCCTGTaGACATCTGAGCCAATGGAC | + |
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Preference number: 2 (lower is better) Translates to: DITAVALRSFLPFLPCNSLTHFL*TSEPMD Trigger: GTCCATTGGCTCAGATGTCCACAGGAAATGTGTTAG...AGAGTTACATGGCAAGAAAGGAAGAAAGGAACGTAGGGCCACTGCTGTTATGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR TCA 90 bp | AAGGGAGCAGGCTTTGGGCCAGATGTGAAGTGGCAATTTCTGTTTGGAATAGTTACTATTTTGGTTGTTTaGGATAGGGTCTCAATAGCT | + |
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Preference number: 2 (lower is better) Translates to: KGAGFGPDVKWQFLFGIVTILVV*DRVSIA Trigger: AGCTATTGAGACCCTATCTCAAACAACCAAAATAGT...AACTATTCCAAACAGAAATTGCCACTTCACATCTGGCCCAAAGCCTGCTCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR CCA 90 bp | ATGATGTCCATATTAGAGCCACTGTCATCATGTTTCAACTTTCATTCCTCCAATTCACTTGGGGCATTATaGCAAAGTTTTCTAGAACCA | + |
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Preference number: 2 (lower is better) Translates to: MMSILEPLSSCFNFHSSNSLGAL*QSFLEP Trigger: TGGTTCTAGAAAACTTTGCCATAATGCCCCAAGTGA...ATTGGAGGAATGAAAGTTGAAACATGATGACAGTGGCTCTAATATGGACATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR CCA 72 bp | GACCCCAGCCCCTCGCCCTCAGGCAAAGCAGCCGGTTaGAACTGGTGGTGTATGATTGCACTTGTTTGGCAT | + |
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Preference number: 3 (lower is better) Translates to: DPSPSPSGKAAG*NWWCMIALVWH Trigger: ATGCCAAACAAGTGCAATCATACACCACCAGTTCCAACCGGCTGCTTTGCCTGAGGGCGAGGGGCTGGGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR TCA 72 bp | TCCTGTGGACATCTGAGCCAATGGACAAGGCCTTCCTaGATCTGGGCTTTCTCTAGAGGAGGGGACCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: SCGHLSQWTRPS*IWAFSRGGDPS Trigger: GCTGGGGTCCCCTCCTCTAGAGAAAGCCCAGATTCAGGAAGGCCTTGTCCATTGGCTCAGATGTCCACAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR CCA 72 bp | CTTGCTAGAAGTCCATGTCTGGCAGCCTTGGGGACATaGAGGGCTTCTCAGGCTGGACAGCATAGGCAACAG | + |
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Preference number: 3 (lower is better) Translates to: LARSPCLAALGT*RASQAGQHRQQ Trigger: CTGTTGCCTATGCTGTCCAGCCTGAGAAGCCCTCCATGTCCCCAAGGCTGCCAGACATGGACTTCTAGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR CCA 72 bp | TTGGGGGACTTGCTAGAAGTCCATGTCTGGCAGCCTTaGGGACATGGAGGGCTTCTCAGGCTGGACAGCATA | + |
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Preference number: 3 (lower is better) Translates to: LGDLLEVHVWQP*GHGGLLRLDSI Trigger: TATGCTGTCCAGCCTGAGAAGCCCTCCATGTCCCCAAGGCTGCCAGACATGGACTTCTAGCAAGTCCCCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR-3UTR CAA 90 bp | TTTCCTTCACAGTCACCAGGGAGGCCTGAGCTGAGTATAAAGGGAGCAGGCTTTAAACAGCCCCCTTCTTaGGATATGGTCCAGCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: FPSQSPGRPELSIKGAGFKQPPS*DMVQPQ Trigger: CTGGGGCTGGACCATATCCAAAGAAGGGGGCTGTTT...AAAGCCTGCTCCCTTTATACTCAGCTCAGGCCTCCCTGGTGACTGTGAAGGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR GCA 72 bp | GAACAGGCCGTCTCCAAGGGAAGCAATCAGGAAATGTaGAAAACTGATCAAGTCCCAGACCAGGAGGGACCT | + |
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Preference number: 3 (lower is better) Translates to: EQAVSKGSNQEM*KTDQVPDQEGP Trigger: AGGTCCCTCCTGGTCTGGGACTTGATCAGTTTTGCACATTTCCTGATTGCTTCCCTTGGAGACGGCCTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR CCA 72 bp | CCCAAGAGCTGGGAATGCAGGTGTGTGCTCAGTTGCTaGGGGTTATTTCAACAGGCAAATGCTGAGGCATTG | + |
|
Preference number: 3 (lower is better) Translates to: PKSWECRCVLSC*GLFQQANAEAL Trigger: CAATGCCTCAGCATTTGCCTGTTGAAATAACCCCCAGCAACTGAGCACACACCTGCATTCCCAGCTCTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| 3UTR CCA 72 bp | GAACTCATGATCCCCTTGTCACAACTTCCCAAGAGCTaGGAATGCAGGTGTGTGCTCAGTTGCTGGGGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: ELMIPLSQLPKS*ECRCVLSCWGL Trigger: TAACCCCCAGCAACTGAGCACACACCTGCATTCCCAGCTCTTGGGAAGTTGTGACAAGGGGATCATGAGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTCAGGAAAGGGGTACCAGGCAGCCATTATGGGTACTGCTTTCCGGAGGGAAGTGGTTCCCTATTTTaGCCCTTGAAGCCGCAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SFRKGVPGSHYGYCFPEGSGSLF*PLKPQR Trigger: CCTTTGCGGCTTCAAGGGCAAAAATAGGGAACCACT...TCCCTCCGGAAAGCAGTACCCATAATGGCTGCCTGGTACCCCTTTCCTGAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTTCACAGTCACCAGGGAGGCCTGAGCTGAGTATAAAGGGAGCAGGCTTTGGGACTGCCTCATTTCACTaGGGGCATTATGGCAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: PSQSPGRPELSIKGAGFGTASFH*GHYGKV Trigger: AACTTTGCCATAATGCCCCAAGTGAAATGAGGCAGT...CCCAAAGCCTGCTCCCTTTATACTCAGCTCAGGCCTCCCTGGTGACTGTGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCTTCACAGTCACCAGGGAGGCCTGAGCTGAGTATAAAGGGAGCAGGCTTTTCCCTATTTTTGCCCTaGAAGCCGCAAAGGGCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: FPSQSPGRPELSIKGAGFSLFLP*KPQRAN Trigger: GTTAGCCCTTTGCGGCTTCAAGGGCAAAAATAGGGA...AAAGCCTGCTCCCTTTATACTCAGCTCAGGCCTCCCTGGTGACTGTGAAGGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| 3UTR TCA 72 bp | AAGCCGCAAAGGGCTAACACATTTCCTGTGGACATCTaGGCCAATGGACAAGGCCTTCCTGAATCTGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: KPQRANTFPVDI*ANGQGLPESGL Trigger: AAGCCCAGATTCAGGAAGGCCTTGTCCATTGGCTCAGATGTCCACAGGAAATGTGTTAGCCCTTTGCGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| 3UTR CCA 72 bp | AGCCCCTCGCCCTCAGGCAAAGCAGCCGGTTGGAACTaGTGGTGTATGATTGCACTTGTTTGGCATTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: SPSPSGKAAGWN*WCMIALVWHLF Trigger: AAATAAATGCCAAACAAGTGCAATCATACACCACCAGTTCCAACCGGCTGCTTTGCCTGAGGGCGAGGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| 3UTR CCA 72 bp | CCAATTTGTGAGCGAAACAGCCCCCTTCTTTGGATATaGTCCAGCCCCAGATATTTCGGTAGGGCCACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PICERNSPLLWI*SSPRYFGRATE Trigger: TTCTGTGGCCCTACCGAAATATCTGGGGCTGGACCATATCCAAAGAAGGGGGCTGTTTCGCTCACAAATTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTGAGTTTTGACCGGAGGCTCATGAACTGGAAGCCAAGTTCTCAGTGTGGTAACAGGGTATCCATTTaGCAGGCTGGGATCAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: GLSFDRRLMNWKPSSQCGNRVSI*QAGISK Trigger: CTTGCTGATCCCAGCCTGCAAAATGGATACCCTGTT...ACCACACTGAGAACTTGGCTTCCAGTTCATGAGCCTCCGGTCAAAACTCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| 3UTR TCA 72 bp | TGGAAGCCAAGTTCTCAGTGTGGTTATGTTAAGAGGTaGTGGAGAGTTTCAGGAAAGGGGTACCAGGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: WKPSSQCGYVKR*WRVSGKGYQAA Trigger: GGCTGCCTGGTACCCCTTTCCTGAAACTCTCCATCACCTCTTAACATAACCACACTGAGAACTTGGCTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| 3UTR GCA 72 bp | TGTCACAACTTCCCAAGAGCTGGGAATGCAGGTGTGTaGTCAGTTGCTGGGGGTTATTTCAACAGGCAAATG | + |
|
Preference number: 3 (lower is better) Translates to: CHNFPRAGNAGV*SVAGGYFNRQM Trigger: CATTTGCCTGTTGAAATAACCCCCAGCAACTGAGCACACACCTGCATTCCCAGCTCTTGGGAAGTTGTGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| 3UTR CCA 72 bp | GGAGAGTTTCAGGAAAGGGGTACCAGGCAGCCATTATaGGTACTGCTTTCCGGAGGGATACACAGTTCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: GEFQERGTRQPL*VLLSGGIHSSY Trigger: ATAAGAACTGTGTATCCCTCCGGAAAGCAGTACCCATAATGGCTGCCTGGTACCCCTTTCCTGAAACTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGATGTCCATATTAGAGCCACTGTCATCATGTTTCAACTTTCATTCCTCCAATCCATGTCTGGCAGCCTaGGGGACATGGAGGGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: MMSILEPLSSCFNFHSSNPCLAA*GTWRAS Trigger: AGAAGCCCTCCATGTCCCCAAGGCTGCCAGACATGG...ATTGGAGGAATGAAAGTTGAAACATGATGACAGTGGCTCTAATATGGACATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| 3UTR TCA 72 bp | GCTCAGTTGCTGGGGGTTATTTCAACAGGCAAATGCTaGGGCATTGTGTTTGAGTTTGTTGAGGGCAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: AQLLGVISTGKC*GIVFEFVEGNS Trigger: ACTGTTGCCCTCAACAAACTCAAACACAATGCCTCAGCATTTGCCTGTTGAAATAACCCCCAGCAACTGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| 3UTR CCA 72 bp | TCAGAGAACTACTGCCTCATTTCACTTGGGGCATTATaGCAAAGTTTTCTAGAACCAGCTGGCAGTGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SENYCLISLGAL*QSFLEPAGSGS Trigger: GGAACCACTGCCAGCTGGTTCTAGAAAACTTTGCCATAATGCCCCAAGTGAAATGAGGCAGTAGTTCTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| 3UTR TCA 72 bp | CCTCAGGCAAAGCAGCCGGTTGGAACTGGTGGTGTATaGTTGCACTTGTTTGGCATTTATTTTGACTGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: PQAKQPVGTGGV*LHLFGIYFDCK Trigger: CTTACAGTCAAAATAAATGCCAAACAAGTGCAATCATACACCACCAGTTCCAACCGGCTGCTTTGCCTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| 3UTR GCA 72 bp | AGGCAAAGCAGCCGGTTGGAACTGGTGGTGTATGATTaGACTTGTTTGGCATTTATTTTGACTGTAAGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: RQSSRLELVVYD*TCLAFILTVRV Trigger: CACCCTTACAGTCAAAATAAATGCCAAACAAGTGCAATCATACACCACCAGTTCCAACCGGCTGCTTTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| 3UTR GCA 72 bp | ACCCACAGGTTGAGAACTAGTGGCTCAGAGAACTACTaGCTCATTTCACTTGGGGCATTATGGCAAAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: THRLRTSGSENY*LISLGALWQSF Trigger: AAAACTTTGCCATAATGCCCCAAGTGAAATGAGGCAGTAGTTCTCTGAGCCACTAGTTCTCAACCTGTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| 3UTR GCA 72 bp | CAGCAGAGAACAGTCCTGTGTGGGCAGATCCCACTTTaGCTTAAGTGTCCTGAAAAATACTTGGAAGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: QQRTVLCGQIPL*LKCPEKYLEVL Trigger: AAGAACTTCCAAGTATTTTTCAGGACACTTAAGGCAAAGTGGGATCTGCCCACACAGGACTGTTCTCTGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| 3UTR TCA 72 bp | CTGTCATCATGTTTCAACTTTCATTCCTCCAATTTGTaGGCGAAACAGCCCCCTTCTTTGGATATGGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LSSCFNFHSSNL*AKQPPSLDMVQ Trigger: CTGGACCATATCCAAAGAAGGGGGCTGTTTCGCTCACAAATTGGAGGAATGAAAGTTGAAACATGATGACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTTTCTCTTTCTGAGACCTGCACAAAGGTCCCAAAGAGTTTCCTAAGCACATGTTTGGCATTTATTTaGACTGTAAGGGTGCGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: VLSLSETCTKVPKSFLSTCLAFI*TVRVRV Trigger: CACTCGCACCCTTACAGTCAAAATAAATGCCAAACA...TGTGCTTAGGAAACTCTTTGGGACCTTTGTGCAGGTCTCAGAAAGAGAAAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| 3UTR CCA 72 bp | AGTATAAAGGGAGCAGGCTTTGGGCCAGATGTGAAGTaGCAATTTCTGTTTGGAATAGTTCCTGAAATTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SIKGAGFGPDVK*QFLFGIVPEIC Trigger: ACAAATTTCAGGAACTATTCCAAACAGAAATTGCCACTTCACATCTGGCCCAAAGCCTGCTCCCTTTATACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR TCA 90 bp | GACAAACACAGGCTCTTCTGGCTACAGGGAGCAGAGCCTGGCCCAGGGGAGTGCAGCCTTTGTCCTGGCTaGCTCAGAGGGTTGGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: DKHRLFWLQGAEPGPGECSLCPG*LRGLGT Trigger: GGTCCCCAACCCTCTGAGTCAGCCAGGACAAAGGCT...GCACTCCCCTGGGCCAGGCTCTGCTCCCTGTAGCCAGAAGAGCCTGTGTTTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR CCA 90 bp | GACAAACACAGGCTCTTCTGGCTACAGGGAGCAGAGCCTGGCCCAGGGGAGTGCTGCGGGACTTCTCCTTaGGGCGCAGGGATGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: DKHRLFWLQGAEPGPGECCGTSP*GAGMAH Trigger: ATGTGCCATCCCTGCGCCCCAAGGAGAAGTCCCGCA...GCACTCCCCTGGGCCAGGCTCTGCTCCCTGTAGCCAGAAGAGCCTGTGTTTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR CCA 90 bp | GGGGGACTTGCTAGAAGTCCATGTCTGGCAGCCTTGGGGACATGGAGGGCTTCTCAGCGAGCAGTTGCTTaGTGCCACTCCGAGTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGLARSPCLAALGTWRASQRAVA*CHSEWG Trigger: TCCCCACTCGGAGTGGCACCAAGCAACTGCTCGCTG...AGAAGCCCTCCATGTCCCCAAGGCTGCCAGACATGGACTTCTAGCAAGTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| 3UTR CAA 72 bp | GGACCCCAGCCCCTCGCCCTCAGGCAAAGCAGCCGGTaGGAACTGGTGGTGTATGATTGCACTTGTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GPQPLALRQSSR*ELVVYDCTCLA Trigger: TGCCAAACAAGTGCAATCATACACCACCAGTTCCAACCGGCTGCTTTGCCTGAGGGCGAGGGGCTGGGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR GCA 90 bp | GGTTTGAGTTTTGACCGGAGGCTCATGAACTGGAAGCCAAGTTCTCAGTGTGGTCACGCAGCAGGCCGCTaGCCTCCACCAGCAGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: GLSFDRRLMNWKPSSQCGHAAGR*PPPAAR Trigger: GCGTGCTGCTGGTGGAGGGCAGCGGCCTGCTGCGTG...ACCACACTGAGAACTTGGCTTCCAGTTCATGAGCCTCCGGTCAAAACTCAAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR TCA 90 bp | CCTTCACAGTCACCAGGGAGGCCTGAGCTGAGTATAAAGGGAGCAGGCTTTGGGACCGCAGCACTGTGTTaGGGGTTCCAGCAAAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: PSQSPGRPELSIKGAGFGTAALC*GFQQRP Trigger: GGGTCTTTGCTGGAACCCTCAACACAGTGCTGCGGT...CCCAAAGCCTGCTCCCTTTATACTCAGCTCAGGCCTCCCTGGTGACTGTGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR TCA 90 bp | GACAAACACAGGCTCTTCTGGCTACAGGGAGCAGAGCCTGGCCCAGGGGAGTGCTGGGCAGCATGGCCTTaGTTGCAGGGAATTTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: DKHRLFWLQGAEPGPGECWAAWP*LQGIYC Trigger: GCAATAAATTCCCTGCAATCAAGGCCATGCTGCCCA...GCACTCCCCTGGGCCAGGCTCTGCTCCCTGTAGCCAGAAGAGCCTGTGTTTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR GCA 90 bp | GGGGGACTTGCTAGAAGTCCATGTCTGGCAGCCTTGGGGACATGGAGGGCTTCTGTGGCATCCAGGACCTaGCATCCATTGTATGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGLARSPCLAALGTWRASVASRT*HPLYVG Trigger: CCCCACATACAATGGATGGCAGGTCCTGGATGCCAC...AGAAGCCCTCCATGTCCCCAAGGCTGCCAGACATGGACTTCTAGCAAGTCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| 3UTR CAA 72 bp | GTTGGGGGACTTGCTAGAAGTCCATGTCTGGCAGCCTaGGGGACATGGAGGGCTTCTCAGGCTGGACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VGGLARSPCLAA*GTWRASQAGQH Trigger: ATGCTGTCCAGCCTGAGAAGCCCTCCATGTCCCCAAGGCTGCCAGACATGGACTTCTAGCAAGTCCCCCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR CCA 90 bp | GGGGGACTTGCTAGAAGTCCATGTCTGGCAGCCTTGGGGACATGGAGGGCTTCTCCCGGCAAACATATTTaGGGTCATTTCTGCGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGLARSPCLAALGTWRASPGKHI*GHFCEP Trigger: TGGCTCGCAGAAATGACCCCAAATATGTTTGCCGGG...AGAAGCCCTCCATGTCCCCAAGGCTGCCAGACATGGACTTCTAGCAAGTCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR GCA 90 bp | GGGGGACTTGCTAGAAGTCCATGTCTGGCAGCCTTGGGGACATGGAGGGCTTCTCCAAGTGATGCGATCTaGATTAACCTCCGCGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GGLARSPCLAALGTWRASPSDAI*INLRED Trigger: ATCTTCGCGGAGGTTAATGCAGATCGCATCACTTGG...AGAAGCCCTCCATGTCCCCAAGGCTGCCAGACATGGACTTCTAGCAAGTCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR GCA 90 bp | AGTTTCAGGAAAGGGGTACCAGGCAGCCATTATGGGTACTGCTTTCCGGAGGGACGAGCAGTTGCTTGGTaGCACTCCGAGTGGGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SFRKGVPGSHYGYCFPEGRAVAW*HSEWGK Trigger: TTTTCCCCACTCGGAGTGGCACCAAGCAACTGCTCG...TCCCTCCGGAAAGCAGTACCCATAATGGCTGCCTGGTACCCCTTTCCTGAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR CCA 90 bp | GCCCTCAGGCAAAGCAGCCGGTTGGAACTGGTGGTGTATGATTGCACTTGTTTGGCTGGTCCAGGGGGTTaGAGAAAAGCATCTGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: ALRQSSRLELVVYDCTCLAGPGG*RKASAR Trigger: ACGTGCAGATGCTTTTCTCCAACCCCCTGGACCAGC...CAAACAAGTGCAATCATACACCACCAGTTCCAACCGGCTGCTTTGCCTGAGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR TCA 90 bp | CCTTCACAGTCACCAGGGAGGCCTGAGCTGAGTATAAAGGGAGCAGGCTTTGGGCTACTGCCTTGGTGCTaGTGTATTTGCCAATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSQSPGRPELSIKGAGFGLLPWC*CICQWS Trigger: ACTCCATTGGCAAATACATCAGCACCAAGGCAGTAG...CCCAAAGCCTGCTCCCTTTATACTCAGCTCAGGCCTCCCTGGTGACTGTGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR TCA 90 bp | GGGCCACAGAAAATGGGCCAACACAGCAGAGAACAGTCCTGTGTGGGCAGATCCACTTGTACTTGTCTGTaGCATCCATGCGAGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GPQKMGQHSREQSCVGRSTCTCL*HPCESC Trigger: GCAACTCTCGCATGGATGTCACAGACAAGTACAAGT...GGATCTGCCCACACAGGACTGTTCTCTGCTGTGTTGGCCCATTTTCTGTGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR GCA 90 bp | GGGGGACTTGCTAGAAGTCCATGTCTGGCAGCCTTGGGGACATGGAGGGCTTCTAGAGTTGCTGCCTACTaGCTTGGTGCTGATGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: GGLARSPCLAALGTWRASRVAAY*LGADVF Trigger: AAATACATCAGCACCAAGGCAGTAGGCAGCAACTCT...AGAAGCCCTCCATGTCCCCAAGGCTGCCAGACATGGACTTCTAGCAAGTCCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR GCA 90 bp | TTTCCTTCACAGTCACCAGGGAGGCCTGAGCTGAGTATAAAGGGAGCAGGCTTTAAGTCAGCGAGCAGTTaGTTGGTGCCACTCCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FPSQSPGRPELSIKGAGFKSASS*LVPLRV Trigger: CACTCGGAGTGGCACCAAGCAACTGCTCGCTGACTT...AAAGCCTGCTCCCTTTATACTCAGCTCAGGCCTCCCTGGTGACTGTGAAGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR CCA 90 bp | AGTTTCAGGAAAGGGGTACCAGGCAGCCATTATGGGTACTGCTTTCCGGAGGGAGCTGACTCAGAGGGTTaGGGACCTGTGGAAACAATG | + |
|
Preference number: 4 (lower is better) Translates to: SFRKGVPGSHYGYCFPEGADSEG*GPVETM Trigger: CATTGTTTCCACAGGTCCCCAACCCTCTGAGTCAGC...TCCCTCCGGAAAGCAGTACCCATAATGGCTGCCTGGTACCCCTTTCCTGAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR CCA 90 bp | GCCCTCAGGCAAAGCAGCCGGTTGGAACTGGTGGTGTATGATTGCACTTGTTTGATACAGCCTTTGTCCTaGCTGACTCAGAGGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALRQSSRLELVVYDCTCLIQPLS*LTQRVG Trigger: CCCAACCCTCTGAGTCAGCCAGGACAAAGGCTGTAT...CAAACAAGTGCAATCATACACCACCAGTTCCAACCGGCTGCTTTGCCTGAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR CCA 90 bp | TCCCAAGAGCTGGGAATGCAGGTGTGTGCTCAGTTGCTGGGGGTTATTTCAACAACCATTCCAGGTCCTTaGGTCCACACCACCGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SQELGMQVCAQLLGVISTTIPGP*VHTTGV Trigger: TACACCGGTGGTGTGGACCCAAGGACCTGGAATGGT...TGTTGAAATAACCCCCAGCAACTGAGCACACACCTGCATTCCCAGCTCTTGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR CCA 90 bp | GGGCCACAGAAAATGGGCCAACACAGCAGAGAACAGTCCTGTGTGGGCAGATCCCTTGTCTTCCCCTTCTaGATTCCTCGAAGATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GPQKMGQHSREQSCVGRSLVFPF*IPRRCC Trigger: GCAACATCTTCGAGGAATCCAGAAGGGGAAGACAAG...GGATCTGCCCACACAGGACTGTTCTCTGCTGTGTTGGCCCATTTTCTGTGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| 3UTR CAA 72 bp | GGTCACTCAATCCCTAAAGGGGTCGGGACCCACAGGTaGAGAACTAGTGGCTCAGAGAACTACTGCCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: GHSIPKGVGTHR*RTSGSENYCLI Trigger: AATGAGGCAGTAGTTCTCTGAGCCACTAGTTCTCAACCTGTGGGTCCCGACCCCTTTAGGGATTGAGTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR TCA 90 bp | GCCCTCAGGCAAAGCAGCCGGTTGGAACTGGTGGTGTATGATTGCACTTGTTTGCCTTGCAAACAGCTGTaGTCCGGATCATGTTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALRQSSRLELVVYDCTCLPCKQL*SGSCCL Trigger: CAGACAACATGATCCGGATCACAGCTGTTTGCAAGG...CAAACAAGTGCAATCATACACCACCAGTTCCAACCGGCTGCTTTGCCTGAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR GCA 90 bp | GGGCCACAGAAAATGGGCCAACACAGCAGAGAACAGTCCTGTGTGGGCAGATCCTGTTGCGCCGAAAGATaGGTTAGGTTTGAGTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GPQKMGQHSREQSCVGRSCCAER*VRFEFV Trigger: GACAAACTCAAACCTAACGCATCTTTCGGCGCAACA...GGATCTGCCCACACAGGACTGTTCTCTGCTGTGTTGGCCCATTTTCTGTGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR CCA 90 bp | GCCCTCAGGCAAAGCAGCCGGTTGGAACTGGTGGTGTATGATTGCACTTGTTTGCCAGGGGATTTCCCATaGCATCGTAGTACACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALRQSSRLELVVYDCTCLPGDFP*HRSTHP Trigger: TGGATGTGTACTACGATGCCATGGGAAATCCCCTGG...CAAACAAGTGCAATCATACACCACCAGTTCCAACCGGCTGCTTTGCCTGAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR TCA 90 bp | TCCCAAGAGCTGGGAATGCAGGTGTGTGCTCAGTTGCTGGGGGTTATTTCAACACAAGGATATTGTGGCTaGGTCCTTCCACACTTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SQELGMQVCAQLLGVISTQGYCG*VLPHFV Trigger: CACGAAGTGTGGAAGGACTCAGCCACAATATCCTTG...TGTTGAAATAACCCCCAGCAACTGAGCACACACCTGCATTCCCAGCTCTTGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR GCA 90 bp | AAGGGAGCAGGCTTTGGGCCAGATGTGAAGTGGCAATTTCTGTTTGGAATAGTTTCAGAGAGGAGGCCCTaGCCCTGGAGGAGATCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KGAGFGPDVKWQFLFGIVSERRP*PWRRSQ Trigger: TTGAGATCTCCTCCAGGGGCAGGGCCTCCTCTCTGA...AACTATTCCAAACAGAAATTGCCACTTCACATCTGGCCCAAAGCCTGCTCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR GCA 90 bp | TTTCCTTCACAGTCACCAGGGAGGCCTGAGCTGAGTATAAAGGGAGCAGGCTTTTCCACACGCTATCACTaGCTTTCTCCAGGGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: FPSQSPGRPELSIKGAGFSTRYH*LSPGDF Trigger: GAAATCCCCTGGAGAAAGGCAGTGATAGCGTGTGGA...AAAGCCTGCTCCCTTTATACTCAGCTCAGGCCTCCCTGGTGACTGTGAAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CCA 90 bp | GACATAACAGCAGTGGCCCTACGTTCCTTTCTTCCTTTCTTGCCATGTAACTCTAGGAGGCCCTGCCCCTaGAGGAGATCTCAACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: DITAVALRSFLPFLPCNSRRPCP*RRSQHS Trigger: TGAGTGTTGAGATCTCCTCCAGGGGCAGGGCCTCCT...AGAGTTACATGGCAAGAAAGGAAGAAAGGAACGTAGGGCCACTGCTGTTATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CCA 90 bp | GACTTGCTAGAAGTCCATGTCTGGCAGCCTTGGGGACATGGAGGGCTTCTCAGGTTGTCCAAAGCCTTTTaGTGCACTTGTCTTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DLLEVHVWQPWGHGGLLRLSKAF*CTCLSS Trigger: TGAGGAAAGACAAGTGCACCAAAAGGCTTTGGACAA...CCTGAGAAGCCCTCCATGTCCCCAAGGCTGCCAGACATGGACTTCTAGCAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CCA 90 bp | CAGCAGAGAACAGTCCTGTGTGGGCAGATCCCACTTTGCCTTAAGTGTCCTGAAACTTCCCAGAAATGCTaGGCTCCTTGTCTTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QQRTVLCGQIPLCLKCPETSQKC*APCLPL Trigger: AAGGGGAAGACAAGGAGCCCAGCATTTCTGGGAAGT...TTCAGGACACTTAAGGCAAAGTGGGATCTGCCCACACAGGACTGTTCTCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR TCA 90 bp | TCCCAAGAGCTGGGAATGCAGGTGTGTGCTCAGTTGCTGGGGGTTATTTCAACAAGTACACATCCACACTaGGGTTTCGATCTGTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SQELGMQVCAQLLGVISTSTHPH*GFDLCR Trigger: ACGACACAGATCGAAACCTCAGTGTGGATGTGTACT...TGTTGAAATAACCCCCAGCAACTGAGCACACACCTGCATTCCCAGCTCTTGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR GCA 90 bp | TTTCCTTCACAGTCACCAGGGAGGCCTGAGCTGAGTATAAAGGGAGCAGGCTTTATTTGGGGTCATTTCTaGGAGCCACATCAGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FPSQSPGRPELSIKGAGFIWGHF*EPHQSQ Trigger: CTGTGACTGATGTGGCTCGCAGAAATGACCCCAAAT...AAAGCCTGCTCCCTTTATACTCAGCTCAGGCCTCCCTGGTGACTGTGAAGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CCA 90 bp | GACATAACAGCAGTGGCCCTACGTTCCTTTCTTCCTTTCTTGCCATGTAACTCTGTCCTCTCCGCACAATaGAATCCTGGCTGGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: DITAVALRSFLPFLPCNSVLSAQ*NPGWRT Trigger: AGTTCTCCAGCCAGGATTCCATTGTGCGGAGAGGAC...AGAGTTACATGGCAAGAAAGGAAGAAAGGAACGTAGGGCCACTGCTGTTATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CCA 90 bp | CTCATTTCACTTGGGGCATTATGGCAAAGTTTTCTAGAACCAGCTGGCAGTGGTCAGCACTGGCCAAATTaGACTGGCCTGAAGCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LISLGALWQSFLEPAGSGQHWPN*TGLKPD Trigger: ATCTGGCTTCAGGCCAGTCCAATTTGGCCAGTGCTG...ACCACTGCCAGCTGGTTCTAGAAAACTTTGCCATAATGCCCCAAGTGAAATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CCA 90 bp | CAGCAGAGAACAGTCCTGTGTGGGCAGATCCCACTTTGCCTTAAGTGTCCTGAATACCATTGTAGACGATaGTCCAGGCTGTCATGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QQRTVLCGQIPLCLKCPEYHCRR*SRLSCS Trigger: TGAACATGACAGCCTGGACCATCGTCTACAATGGTA...TTCAGGACACTTAAGGCAAAGTGGGATCTGCCCACACAGGACTGTTCTCTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR TCA 90 bp | CAGCAGAGAACAGTCCTGTGTGGGCAGATCCCACTTTGCCTTAAGTGTCCTGAACCAAAATGGAGAGGCTaGTGTTCAGAATGTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QQRTVLCGQIPLCLKCPEPKWRG*CSECLL Trigger: AAGAAGACATTCTGAACATCAGCCTCTCCATTTTGG...TTCAGGACACTTAAGGCAAAGTGGGATCTGCCCACACAGGACTGTTCTCTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CCA 90 bp | GGTTTGAGTTTTGACCGGAGGCTCATGAACTGGAAGCCAAGTTCTCAGTGTGGTCAATGGAATCCTGGCTaGAGAACTTGTCTGTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLSFDRRLMNWKPSSQCGQWNPG*RTCLCD Trigger: ATCACACAGACAAGTTCTCCAGCCAGGATTCCATTG...ACCACACTGAGAACTTGGCTTCCAGTTCATGAGCCTCCGGTCAAAACTCAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR GCA 90 bp | CTCATTTCACTTGGGGCATTATGGCAAAGTTTTCTAGAACCAGCTGGCAGTGGTTTGCAGGGAATTTATTaGAGGAAAAGTCAGCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LISLGALWQSFLEPAGSGLQGIY*RKSQRA Trigger: TGCTCGCTGACTTTTCCTGCAATAAATTCCCTGCAA...ACCACTGCCAGCTGGTTCTAGAAAACTTTGCCATAATGCCCCAAGTGAAATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CCA 90 bp | ATGATGTCCATATTAGAGCCACTGTCATCATGTTTCAACTTTCATTCCTCCAATGCCATCCATTGTATGTaGGGCCTAGGTCAGTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: MMSILEPLSSCFNFHSSNAIHCM*GLGQSA Trigger: TGCGGACTGACCTAGGCCCCACATACAATGGATGGC...ATTGGAGGAATGAAAGTTGAAACATGATGACAGTGGCTCTAATATGGACATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CCA 90 bp | AAGGGAGCAGGCTTTGGGCCAGATGTGAAGTGGCAATTTCTGTTTGGAATAGTTCTCACTGGAACCTTCTaGATACTTGTACTTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KGAGFGPDVKWQFLFGIVLTGTF*ILVLVC Trigger: ACAGACAAGTACAAGTATCCAGAAGGTTCCAGTGAG...AACTATTCCAAACAGAAATTGCCACTTCACATCTGGCCCAAAGCCTGCTCCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR CAA 72 bp | CTGGTGGTGTATGATTGCACTTGTTTGGCATTTATTTaGACTGTAAGGGTGCGAGTGGTGTGGTATGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LVVYDCTCLAFI*TVRVRVVWYVT Trigger: AGTCACATACCACACCACTCGCACCCTTACAGTCAAAATAAATGCCAAACAAGTGCAATCATACACCACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CCA 90 bp | GTTCTTTCTCTTTCTGAGACCTGCACAAAGGTCCCAAAGAGTTTCCTAAGCACACTTGTCTTTCCTCACTaGAACCTTCTGGATACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VLSLSETCTKVPKSFLSTLVFPH*NLLDTC Trigger: ACAAGTATCCAGAAGGTTCCAGTGAGGAAAGACAAG...TGTGCTTAGGAAACTCTTTGGGACCTTTGTGCAGGTCTCAGAAAGAGAAAGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR GCA 90 bp | ATGATGTCCATATTAGAGCCACTGTCATCATGTTTCAACTTTCATTCCTCCAATGACTTCTTTGCCTACTaGCAGTATCCCCGTGACCTT | + |
|
Preference number: 4 (lower is better) Translates to: MMSILEPLSSCFNFHSSNDFFAY*QYPRDL Trigger: AAGGTCACGGGGATACTGGCAGTAGGCAAAGAAGTC...ATTGGAGGAATGAAAGTTGAAACATGATGACAGTGGCTCTAATATGGACATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CCA 90 bp | ATGATGTCCATATTAGAGCCACTGTCATCATGTTTCAACTTTCATTCCTCCAATCGCACAATGGAATCCTaGCTGGAGAACTTGTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MMSILEPLSSCFNFHSSNRTMES*LENLSV Trigger: CACAGACAAGTTCTCCAGCCAGGATTCCATTGTGCG...ATTGGAGGAATGAAAGTTGAAACATGATGACAGTGGCTCTAATATGGACATCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| 3UTR CAA 72 bp | CAGATCCCACTTTGCCTTAAGTGTCCTGAAAAATACTaGGAAGTTCTTTCTCTTTCTGAGACCTGCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QIPLCLKCPEKY*EVLSLSETCTK Trigger: CTTTGTGCAGGTCTCAGAAAGAGAAAGAACTTCCAAGTATTTTTCAGGACACTTAAGGCAAAGTGGGATCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR GCA 90 bp | ATGATGTCCATATTAGAGCCACTGTCATCATGTTTCAACTTTCATTCCTCCAATAGTTCCAGCCAACCATaGCAATTCGATTTGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MMSILEPLSSCFNFHSSNSSSQP*QFDLCC Trigger: GCAGCACAAATCGAATTGGCATGGTTGGCTGGAACT...ATTGGAGGAATGAAAGTTGAAACATGATGACAGTGGCTCTAATATGGACATCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CCA 90 bp | ATGATGTCCATATTAGAGCCACTGTCATCATGTTTCAACTTTCATTCCTCCAATTGCTTCTCCCAGAGATaGAAAATACAGCCTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MMSILEPLSSCFNFHSSNCFSQR*KIQPLS Trigger: GGACAAAGGCTGTATTTTCCATCTCTGGGAGAAGCA...ATTGGAGGAATGAAAGTTGAAACATGATGACAGTGGCTCTAATATGGACATCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CCA 90 bp | CCTCCACCAGCAGCACGCAGTTATTCACCGGCTGGTCCAGGGGGTTaGAGAAAAGCATCTGCACGTTCACGGGCTTCCGCACATGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PPPAARSYSPAGPGG*RKASARSRASAHEP Trigger: AGGCTCATGTGCGGAAGCCCGTGAACGTGCAGATGCTTTTCTCCAACCCCCTGGACCAGCCGGTGAATAACTGCGTGCTGCTGGTGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CAA 90 bp | GGGGGACTTGCTAGAAGTCCATGTCTGGCAGCCTTGGGGACATGGAGGGCTTCTGCCTCATCGGGCACCTaGCAAACAGCTGTGATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GGLARSPCLAALGTWRASASSGT*QTAVIR Trigger: CCGGATCACAGCTGTTTGCAAGGTGCCCGATGAGGC...AGAAGCCCTCCATGTCCCCAAGGCTGCCAGACATGGACTTCTAGCAAGTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS TCA 90 bp | GAGCCTGTTCCAGCACCTCCAGGGTCAAAGCAGGATTATCCAGGATaGCATCCCGTTCCACCACCACCTCAGCCTCATCGGGCACCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: EPVPAPPGSKQDYPG*HPVPPPPQPHRAPC Trigger: GCAAGGTGCCCGATGAGGCTGAGGTGGTGGTGGAACGGGATGTCATCCTGGATAATCCTGCTTTGACCCTGGAGGTGCTGGAACAGGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS TCA 90 bp | AGGGGGTTGGAGAAAAGCATCTGCACGTTCACGGGCTTCCGCACATaGGCCTGTTCCAGCACCTCCAGGGTCAAAGCAGGATTATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RGLEKSICTFTGFRT*ACSSTSRVKAGLSR Trigger: CCTGGATAATCCTGCTTTGACCCTGGAGGTGCTGGAACAGGCTCATGTGCGGAAGCCCGTGAACGTGCAGATGCTTTTCTCCAACCCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CAA 90 bp | GACTTGCTAGAAGTCCATGTCTGGCAGCCTTGGGGACATGGAGGGCTTCTCAGGTGGAAAATACAGCCTTaGTCCTGGCTGACTCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: DLLEVHVWQPWGHGGLLRWKIQP*SWLTQR Trigger: CCTCTGAGTCAGCCAGGACAAAGGCTGTATTTTCCA...CCTGAGAAGCCCTCCATGTCCCCAAGGCTGCCAGACATGGACTTCTAGCAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CAA 90 bp | TTTCCTTCACAGTCACCAGGGAGGCCTGAGCTGAGTATAAAGGGAGCAGGCTTTCCAGCACTGGCCAAATaGGACTGGCCTGAAGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FPSQSPGRPELSIKGAGFPALAK*DWPEAR Trigger: TCTGGCTTCAGGCCAGTCCAATTTGGCCAGTGCTGG...AAAGCCTGCTCCCTTTATACTCAGCTCAGGCCTCCCTGGTGACTGTGAAGGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CAA 90 bp | GACTTGCTAGAAGTCCATGTCTGGCAGCCTTGGGGACATGGAGGGCTTCTCAGGAGCCTTTTGGTGCACTaGTCTTTCCTCACTGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: DLLEVHVWQPWGHGGLLRSLLVH*SFLTGT Trigger: GGTTCCAGTGAGGAAAGACAAGTGCACCAAAAGGCT...CCTGAGAAGCCCTCCATGTCCCCAAGGCTGCCAGACATGGACTTCTAGCAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CAA 90 bp | AGTTTCAGGAAAGGGGTACCAGGCAGCCATTATGGGTACTGCTTTCCGGAGGGAAAAGTCAGCGAGCAGTaGCTTGGTGCCACTCCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SFRKGVPGSHYGYCFPEGKVSEQ*LGATPS Trigger: ACTCGGAGTGGCACCAAGCAACTGCTCGCTGACTTT...TCCCTCCGGAAAGCAGTACCCATAATGGCTGCCTGGTACCCCTTTCCTGAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS TCA 90 bp | TGTCCTCTCCGCACAATGGAATCCTGGCTGGAGAACTTGTCTGTGTaGTGCGCCCTTCGATTCATAGGCACCTGCCAGTTGACGTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CPLRTMESWLENLSV*CALRFIGTCQLTFW Trigger: CCAAAACGTCAACTGGCAGGTGCCTATGAATCGAAGGGCGCATCACACAGACAAGTTCTCCAGCCAGGATTCCATTGTGCGGAGAGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS TCA 90 bp | GTTCCACCACCACCTCAGCCTCATCGGGCACCTTGCAAACAGCTGTaGTCCGGATCATGTTGTCTGCCTTCAGGTATCTCTCATACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VPPPPQPHRAPCKQL*SGSCCLPSGISHTE Trigger: CTCAGTATGAGAGATACCTGAAGGCAGACAACATGATCCGGATCACAGCTGTTTGCAAGGTGCCCGATGAGGCTGAGGTGGTGGTGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CAA 90 bp | AGTTTCAGGAAAGGGGTACCAGGCAGCCATTATGGGTACTGCTTTCCGGAGGGAGACAGACTGACTTCTTaGCCTACTGCCAGTATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SFRKGVPGSHYGYCFPEGDRLTS*PTASIP Trigger: GGGGATACTGGCAGTAGGCAAAGAAGTCAGTCTGTC...TCCCTCCGGAAAGCAGTACCCATAATGGCTGCCTGGTACCCCTTTCCTGAAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS GCA 90 bp | GGCAATAGCAATGGCCAGATTATTGCCACTGTTGGCTTTGAGCGCTaGATTCCAGCCACCCGTGCTTCTCCCAGAGATGGAAAATACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GNSNGQIIATVGFER*IPATRASPRDGKYS Trigger: GCTGTATTTTCCATCTCTGGGAGAAGCACGGGTGGCTGGAATGCAGCGCTCAAAGCCAACAGTGGCAATAATCTGGCCATTGCTATTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CCA 90 bp | GGTTGCAGACTAATATTATCTCCCAGGGCTGTCCTCTCCGCACAATaGAATCCTGGCTGGAGAACTTGTCTGTGTGATGCGCCCTTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: GCRLILSPRAVLSAQ*NPGWRTCLCDAPFD Trigger: ATCGAAGGGCGCATCACACAGACAAGTTCTCCAGCCAGGATTCCATTGTGCGGAGAGGACAGCCCTGGGAGATAATATTAGTCTGCAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CAA 90 bp | GGTTTGAGTTTTGACCGGAGGCTCATGAACTGGAAGCCAAGTTCTCAGTGTGGTACATCCATGCGAGAGTaGCTGCCTACTGCCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GLSFDRRLMNWKPSSQCGTSMRE*LPTALV Trigger: CACCAAGGCAGTAGGCAGCAACTCTCGCATGGATGT...ACCACACTGAGAACTTGGCTTCCAGTTCATGAGCCTCCGGTCAAAACTCAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CAA 90 bp | GGGCCACAGAAAATGGGCCAACACAGCAGAGAACAGTCCTGTGTGGGCAGATCCTTTGTCCAAAGCCTTTaGGTGCACTTGTCTTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GPQKMGQHSREQSCVGRSFVQSL*VHLSFL Trigger: GAGGAAAGACAAGTGCACCAAAAGGCTTTGGACAAA...GGATCTGCCCACACAGGACTGTTCTCTGCTGTGTTGGCCCATTTTCTGTGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CAA 90 bp | GCCCTCAGGCAAAGCAGCCGGTTGGAACTGGTGGTGTATGATTGCACTTGTTTGGTGATCCGGATCATGTaGTCTGCCTTCAGGTATCTC | + |
|
Preference number: 5 (lower is better) Translates to: ALRQSSRLELVVYDCTCLVIRIM*SAFRYL Trigger: GAGATACCTGAAGGCAGACAACATGATCCGGATCAC...CAAACAAGTGCAATCATACACCACCAGTTCCAACCGGCTGCTTTGCCTGAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CAA 90 bp | GTTCTTTCTCTTTCTGAGACCTGCACAAAGGTCCCAAAGAGTTTCCTAAGCACATCAGCGAGCAGTTGCTaGGTGCCACTCCGAGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VLSLSETCTKVPKSFLSTSASSC*VPLRVG Trigger: CCCCACTCGGAGTGGCACCAAGCAACTGCTCGCTGA...TGTGCTTAGGAAACTCTTTGGGACCTTTGTGCAGGTCTCAGAAAGAGAAAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CAA 90 bp | AAGGGAGCAGGCTTTGGGCCAGATGTGAAGTGGCAATTTCTGTTTGGAATAGTTCACCGCAGCACTGTGTaGAGGGTTCCAGCAAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: KGAGFGPDVKWQFLFGIVHRSTV*RVPAKT Trigger: GGTCTTTGCTGGAACCCTCAACACAGTGCTGCGGTG...AACTATTCCAAACAGAAATTGCCACTTCACATCTGGCCCAAAGCCTGCTCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CAA 90 bp | TTTCCTTCACAGTCACCAGGGAGGCCTGAGCTGAGTATAAAGGGAGCAGGCTTTCAGGATCCAAGGATATaGTGGCTGAGTCCTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: FPSQSPGRPELSIKGAGFQDPRI*WLSPST Trigger: TGTGGAAGGACTCAGCCACAATATCCTTGGATCCTG...AAAGCCTGCTCCCTTTATACTCAGCTCAGGCCTCCCTGGTGACTGTGAAGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR CAA 90 bp | GTTCTTTCTCTTTCTGAGACCTGCACAAAGGTCCCAAAGAGTTTCCTAAGCACAGGCTGGTCCAGGGGGTaGGAGAAAAGCATCTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: VLSLSETCTKVPKSFLSTGWSRG*EKSICT Trigger: CGTGCAGATGCTTTTCTCCAACCCCCTGGACCAGCC...TGTGCTTAGGAAACTCTTTGGGACCTTTGTGCAGGTCTCAGAAAGAGAAAGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS GCA 90 bp | AGTCATGTTTTTGAGCATCAGGGACAGACTGACTTCTTTGCCTACTaGCAGTATCCCCGTGACCTTGAACTTCCCAGAAATGCTGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SHVFEHQGQTDFFAY*QYPRDLELPRNAGL Trigger: GAGCCCAGCATTTCTGGGAAGTTCAAGGTCACGGGGATACTGGCAGTAGGCAAAGAAGTCAGTCTGTCCCTGATGCTCAAAAACATGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS GCA 90 bp | CTCATCGGGCACCTTGCAAACAGCTGTGATCCGGATCATGTTGTCTaGCTTCAGGTATCTCTCATACTGAGAGTATGCGATCTTCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: LIGHLANSCDPDHVV*LQVSLILRVCDLHR Trigger: CCTGTGAAGATCGCATACTCTCAGTATGAGAGATACCTGAAGGCAGACAACATGATCCGGATCACAGCTGTTTGCAAGGTGCCCGATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR CAA 90 bp | GACTTGCTAGAAGTCCATGTCTGGCAGCCTTGGGGACATGGAGGGCTTCTCAGGCCAGAAATAACACCGTaGTCATCATTGCCATTAATC | + |
|
Preference number: 5 (lower is better) Translates to: DLLEVHVWQPWGHGGLLRPEITP*SSLPLI Trigger: GATTAATGGCAATGATGACAACGGTGTTATTTCTGG...CCTGAGAAGCCCTCCATGTCCCCAAGGCTGCCAGACATGGACTTCTAGCAAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR CAA 90 bp | CAGCAGAGAACAGTCCTGTGTGGGCAGATCCCACTTTGCCTTAAGTGTCCTGAAATGGGCAGCATGGCCTaGATTGCAGGGAATTTATTG | + |
|
Preference number: 5 (lower is better) Translates to: QQRTVLCGQIPLCLKCPEMGSMA*IAGNLL Trigger: CAATAAATTCCCTGCAATCAAGGCCATGCTGCCCAT...TTCAGGACACTTAAGGCAAAGTGGGATCTGCCCACACAGGACTGTTCTCTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS TCA 90 bp | CCTTTGTCCTGGCTGACTCAGAGGGTTGGGGACCTGTGGAAACAATaGAATTCAGATCTTCTCCAGACTCAAGACTTCGGTTGCAGACTA | + |
|
Preference number: 5 (lower is better) Translates to: PLSWLTQRVGDLWKQ*NSDLLQTQDFGCRL Trigger: TAGTCTGCAACCGAAGTCTTGAGTCTGGAGAAGATCTGAATTTCATTGTTTCCACAGGTCCCCAACCCTCTGAGTCAGCCAGGACAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CAA 90 bp | GTTCTTTCTCTTTCTGAGACCTGCACAAAGGTCCCAAAGAGTTTCCTAAGCACATTGCCACTGTTGGCTTaGAGCGCTGCATTCCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VLSLSETCTKVPKSFLSTLPLLA*SAAFQP Trigger: TGGCTGGAATGCAGCGCTCAAAGCCAACAGTGGCAA...TGTGCTTAGGAAACTCTTTGGGACCTTTGTGCAGGTCTCAGAAAGAGAAAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CAA 90 bp | CTCATTTCACTTGGGGCATTATGGCAAAGTTTTCTAGAACCAGCTGGCAGTGGTACCCGGCAAACATATTaGGGGTCATTTCTGCGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LISLGALWQSFLEPAGSGTRQTY*GSFLRA Trigger: GGCTCGCAGAAATGACCCCAAATATGTTTGCCGGGT...ACCACTGCCAGCTGGTTCTAGAAAACTTTGCCATAATGCCCCAAGTGAAATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CAA 90 bp | TCCCAAGAGCTGGGAATGCAGGTGTGTGCTCAGTTGCTGGGGGTTATTTCAACAATTGCAGGGAATTTATaGCAGGAAAAGTCAGCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SQELGMQVCAQLLGVISTIAGNL*QEKSAS Trigger: GCTCGCTGACTTTTCCTGCAATAAATTCCCTGCAAT...TGTTGAAATAACCCCCAGCAACTGAGCACACACCTGCATTCCCAGCTCTTGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS GCA 90 bp | GATGAAGATCATGTCAAAATTCCGGTCCACATCACCGGCTTTGATTaGATTAACGGAAGCTGGACCGCACTGGAACACACCTTGACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: DEDHVKIPVHITGFD*INGSWTALEHTLTS Trigger: AGAAGTCAAGGTGTGTTCCAGTGCGGTCCAGCTTCCGTTAATGCAATCAAAGCCGGTGATGTGGACCGGAATTTTGACATGATCTTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CCA 90 bp | CCAGAGATGGAAAATACAGCCTTTGTCCTGGCTGACTCAGAGGGTTaGGGACCTGTGGAAACAATGAAATTCAGATCTTCTCCAGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: PEMENTAFVLADSEG*GPVETMKFRSSPDS Trigger: TGAGTCTGGAGAAGATCTGAATTTCATTGTTTCCACAGGTCCCCAACCCTCTGAGTCAGCCAGGACAAAGGCTGTATTTTCCATCTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CAA 90 bp | AGTTTCAGGAAAGGGGTACCAGGCAGCCATTATGGGTACTGCTTTCCGGAGGGAAAAGATGCGTTAGGTTaGAGTTTGTCCAAAGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SFRKGVPGSHYGYCFPEGKDALG*SLSKAF Trigger: AAAGGCTTTGGACAAACTCAAACCTAACGCATCTTT...TCCCTCCGGAAAGCAGTACCCATAATGGCTGCCTGGTACCCCTTTCCTGAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS-3UTR CAA 90 bp | CAGCAGAGAACAGTCCTGTGTGGGCAGATCCCACTTTGCCTTAAGTGTCCTGAATCATTAGTCATGTTTTaGAGCATCAGGGACAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: QQRTVLCGQIPLCLKCPESLVMF*SIRDRL Trigger: CAGTCTGTCCCTGATGCTCAAAAACATGACTAATGA...TTCAGGACACTTAAGGCAAAGTGGGATCTGCCCACACAGGACTGTTCTCTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS TCA 90 bp | AGTTCCAGCCAACCATGCCAATTCGATTTGTGCTGCCCACATAGATaGTGCCAGAATCTTCTTCAACATACTCTTGTCTTTCGGCGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSSQPCQFDLCCPHR*CQNLLQHTLVFRRG Trigger: ACCACGCCGAAAGACAAGAGTATGTTGAAGAAGATTCTGGCATCATCTATGTGGGCAGCACAAATCGAATTGGCATGGTTGGCTGGAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS TCA 90 bp | CACAGGATACTGTATTTCTTCTTCAGGATCCAAGGATATTGTGGCTaGGTCCTTCCACACTTCGTGGACAAGGGTACCATTGTAGACGAT | + |
|
Preference number: 5 (lower is better) Translates to: HRILYFFFRIQGYCG*VLPHFVDKGTIVDD Trigger: ATCGTCTACAATGGTACCCTTGTCCACGAAGTGTGGAAGGACTCAGCCACAATATCCTTGGATCCTGAAGAAGAAATACAGTATCCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS TCA 90 bp | GCTGTGATCCGGATCATGTTGTCTGCCTTCAGGTATCTCTCATACTaGGAGTATGCGATCTTCACAGGATACTGTATTTCTTCTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: AVIRIMLSAFRYLSY*EYAIFTGYCISSSG Trigger: TCCTGAAGAAGAAATACAGTATCCTGTGAAGATCGCATACTCTCAGTATGAGAGATACCTGAAGGCAGACAACATGATCCGGATCACAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS GCA 90 bp | CCGGATCATGTTGTCTGCCTTCAGGTATCTCTCATACTGAGAGTATaGGATCTTCACAGGATACTGTATTTCTTCTTCAGGATCCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: PDHVVCLQVSLILRV*DLHRILYFFFRIQG Trigger: TCCTTGGATCCTGAAGAAGAAATACAGTATCCTGTGAAGATCGCATACTCTCAGTATGAGAGATACCTGAAGGCAGACAACATGATCCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS-3UTR CAA 90 bp | CTCATTTCACTTGGGGCATTATGGCAAAGTTTTCTAGAACCAGCTGGCAGTGGTGACTCAAGACTTCGGTaGCAGACTAATATTATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LISLGALWQSFLEPAGSGDSRLR*QTNIIS Trigger: GGAGATAATATTAGTCTGCAACCGAAGTCTTGAGTC...ACCACTGCCAGCTGGTTCTAGAAAACTTTGCCATAATGCCCCAAGTGAAATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS GCA 90 bp | CTTCTGGGTGTTATTTCTATTATTATAGATCCAAGTGATGCGATCTaGATTAACCTCCGCGAAGATGAAGATCATGTCAAAATTCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLGVISIIIDPSDAI*INLREDEDHVKIPV Trigger: GACCGGAATTTTGACATGATCTTCATCTTCGCGGAGGTTAATGCAGATCGCATCACTTGGATCTATAATAATAGAAATAACACCCAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS TCA 72 bp | ACTTCTCCTTGGGGCGCAGGGATGGCACATCAATCTTaGGGCTGCCACGCAGCAGGCCGCTGCCCTCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: TSPWGAGMAHQS*GCHAAGRCPPP Trigger: TGGTGGAGGGCAGCGGCCTGCTGCGTGGCAGCCTCAAGATTGATGTGCCATCCCTGCGCCCCAAGGAGAAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS CCA 72 bp | GCAGCACGCAGTTATTCACCGGCTGGTCCAGGGGGTTaGAGAAAAGCATCTGCACGTTCACGGGCTTCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: AARSYSPAGPGG*RKASARSRASA Trigger: TGCGGAAGCCCGTGAACGTGCAGATGCTTTTCTCCAACCCCCTGGACCAGCCGGTGAATAACTGCGTGCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CCA 72 bp | CTGCCCTCCACCAGCAGCACGCAGTTATTCACCGGCTaGTCCAGGGGGTTGGAGAAAAGCATCTGCACGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LPSTSSTQLFTG*SRGLEKSICTF Trigger: GAACGTGCAGATGCTTTTCTCCAACCCCCTGGACCAGCCGGTGAATAACTGCGTGCTGCTGGTGGAGGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CAA 72 bp | AGCAGCACGCAGTTATTCACCGGCTGGTCCAGGGGGTaGGAGAAAAGCATCTGCACGTTCACGGGCTTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SSTQLFTGWSRG*EKSICTFTGFR Trigger: GCGGAAGCCCGTGAACGTGCAGATGCTTTTCTCCAACCCCCTGGACCAGCCGGTGAATAACTGCGTGCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS TCA 72 bp | CCAGCACCTCCAGGGTCAAAGCAGGATTATCCAGGATaGCATCCCGTTCCACCACCACCTCAGCCTCATCGG | + |
|
Preference number: 6 (lower is better) Translates to: PAPPGSKQDYPG*HPVPPPPQPHR Trigger: CCGATGAGGCTGAGGTGGTGGTGGAACGGGATGTCATCCTGGATAATCCTGCTTTGACCCTGGAGGTGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CAA 72 bp | TCCCGTTCCACCACCACCTCAGCCTCATCGGGCACCTaGCAAACAGCTGTGATCCGGATCATGTTGTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SRSTTTSASSGT*QTAVIRIMLSA Trigger: GGCAGACAACATGATCCGGATCACAGCTGTTTGCAAGGTGCCCGATGAGGCTGAGGTGGTGGTGGAACGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CCA 72 bp | CCCAGGGCTGTCCTCTCCGCACAATGGAATCCTGGCTaGAGAACTTGTCTGTGTGATGCGCCCTTCGATTCA | + |
|
Preference number: 6 (lower is better) Translates to: PRAVLSAQWNPG*RTCLCDAPFDS Trigger: TGAATCGAAGGGCGCATCACACAGACAAGTTCTCCAGCCAGGATTCCATTGTGCGGAGAGGACAGCCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CCA 72 bp | GCGCTGCATTCCAGCCACCCGTGCTTCTCCCAGAGATaGAAAATACAGCCTTTGTCCTGGCTGACTCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ALHSSHPCFSQR*KIQPLSWLTQR Trigger: CCTCTGAGTCAGCCAGGACAAAGGCTGTATTTTCCATCTCTGGGAGAAGCACGGGTGGCTGGAATGCAGCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS CAA 72 bp | CACCCGTGCTTCTCCCAGAGATGGAAAATACAGCCTTaGTCCTGGCTGACTCAGAGGGTTGGGGACCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: HPCFSQRWKIQP*SWLTQRVGDLW Trigger: CCACAGGTCCCCAACCCTCTGAGTCAGCCAGGACAAAGGCTGTATTTTCCATCTCTGGGAGAAGCACGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CAA 90 bp | AGGATGACATCCCGTTCCACCACCACCTCAGCCTCATCGGGCACCTaGCAAACAGCTGTGATCCGGATCATGTTGTCTGCCTTCAGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: RMTSRSTTTSASSGT*QTAVIRIMLSAFRY Trigger: ATACCTGAAGGCAGACAACATGATCCGGATCACAGCTGTTTGCAAGGTGCCCGATGAGGCTGAGGTGGTGGTGGAACGGGATGTCATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS TCA 72 bp | CGCACAATGGAATCCTGGCTGGAGAACTTGTCTGTGTaGTGCGCCCTTCGATTCATAGGCACCTGCCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RTMESWLENLSV*CALRFIGTCQL Trigger: CAACTGGCAGGTGCCTATGAATCGAAGGGCGCATCACACAGACAAGTTCTCCAGCCAGGATTCCATTGTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS TCA 72 bp | CCACCTCAGCCTCATCGGGCACCTTGCAAACAGCTGTaGTCCGGATCATGTTGTCTGCCTTCAGGTATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PPQPHRAPCKQL*SGSCCLPSGIS Trigger: AGAGATACCTGAAGGCAGACAACATGATCCGGATCACAGCTGTTTGCAAGGTGCCCGATGAGGCTGAGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS GCA 72 bp | AATGGCCAGATTATTGCCACTGTTGGCTTTGAGCGCTaGATTCCAGCCACCCGTGCTTCTCCCAGAGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: NGQIIATVGFER*IPATRASPRDG Trigger: TCCATCTCTGGGAGAAGCACGGGTGGCTGGAATGCAGCGCTCAAAGCCAACAGTGGCAATAATCTGGCCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CAA 90 bp | ACAGGACTGGCAATAGCAATGGCCAGATTATTGCCACTGTTGGCTTaGAGCGCTGCATTCCAGCCACCCGTGCTTCTCCCAGAGATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: TGLAIAMARLLPLLA*SAAFQPPVLLPEME Trigger: TTCCATCTCTGGGAGAAGCACGGGTGGCTGGAATGCAGCGCTCAAAGCCAACAGTGGCAATAATCTGGCCATTGCTATTGCCAGTCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS TCA 72 bp | AGGTCAGTCCGCACGAACCAGCCTTCATTCCAGACGTaGAAATTCCACACGCTATCACTGCCTTTCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSVRTNQPSFQT*KFHTLSLPFSR Trigger: CCTGGAGAAAGGCAGTGATAGCGTGTGGAATTTTCACGTCTGGAATGAAGGCTGGTTCGTGCGGACTGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS GCA 72 bp | CACTCAGCACCCGGCAAACATATTTGGGGTCATTTCTaGGAGCCACATCAGTCACAGGGTCACGACGGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: HSAPGKHIWGHF*EPHQSQGHDGN Trigger: ATTTCCGTCGTGACCCTGTGACTGATGTGGCTCGCAGAAATGACCCCAAATATGTTTGCCGGGTGCTGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CCA 72 bp | AAAAGTCAGCGAGCAGTTGCTTGGTGCCACTCCGAGTaGGGAAAATCTCAAATCGGATGCGGGACTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: KSQRAVAWCHSE*GKSQIGCGTSP Trigger: AGGAGAAGTCCCGCATCCGATTTGAGATTTTCCCCACTCGGAGTGGCACCAAGCAACTGCTCGCTGACTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS GCA 72 bp | CATGTCAAAATTCCGGTCCACATCACCGGCTTTGATTaGATTAACGGAAGCTGGACCGCACTGGAACACACC | + |
|
Preference number: 6 (lower is better) Translates to: HVKIPVHITGFD*INGSWTALEHT Trigger: GGTGTGTTCCAGTGCGGTCCAGCTTCCGTTAATGCAATCAAAGCCGGTGATGTGGACCGGAATTTTGACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CCA 72 bp | CTAATATTATCTCCCAGGGCTGTCCTCTCCGCACAATaGAATCCTGGCTGGAGAACTTGTCTGTGTGATGCG | + |
|
Preference number: 6 (lower is better) Translates to: LILSPRAVLSAQ*NPGWRTCLCDA Trigger: CGCATCACACAGACAAGTTCTCCAGCCAGGATTCCATTGTGCGGAGAGGACAGCCCTGGGAGATAATATTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CCA 72 bp | TGCTTCTCCCAGAGATGGAAAATACAGCCTTTGTCCTaGCTGACTCAGAGGGTTGGGGACCTGTGGAAACAA | + |
|
Preference number: 6 (lower is better) Translates to: CFSQRWKIQPLS*LTQRVGDLWKQ Trigger: TTGTTTCCACAGGTCCCCAACCCTCTGAGTCAGCCAGGACAAAGGCTGTATTTTCCATCTCTGGGAGAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CCA 72 bp | TCCACACTTCGTGGACAAGGGTACCATTGTAGACGATaGTCCAGGCTGTCATGTTCATCGTCACTGTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: STLRGQGYHCRR*SRLSCSSSLSS Trigger: GGAAGACAGTGACGATGAACATGACAGCCTGGACCATCGTCTACAATGGTACCCTTGTCCACGAAGTGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CAA 72 bp | CCATTAATCATGGCACTCAGCACCCGGCAAACATATTaGGGGTCATTTCTGCGAGCCACATCAGTCACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PLIMALSTRQTY*GSFLRATSVTG Trigger: CCCTGTGACTGATGTGGCTCGCAGAAATGACCCCAAATATGTTTGCCGGGTGCTGAGTGCCATGATTAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CAA 90 bp | TCGGCGTGGTTACTCATAAAGACATCATCCGCTTGCAACCACGGGTaGAAGAGCATTATAAACGTGCCAAGTTTCAGAGAGGAGGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SAWLLIKTSSACNHG*KSIINVPSFREEAL Trigger: CAGGGCCTCCTCTCTGAAACTTGGCACGTTTATAATGCTCTTCAACCCGTGGTTGCAAGCGGATGATGTCTTTATGAGTAACCACGCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS TCA 72 bp | TCTCCCAGAGATGGAAAATACAGCCTTTGTCCTGGCTaGCTCAGAGGGTTGGGGACCTGTGGAAACAATGAA | + |
|
Preference number: 6 (lower is better) Translates to: SPRDGKYSLCPG*LRGLGTCGNNE Trigger: TTCATTGTTTCCACAGGTCCCCAACCCTCTGAGTCAGCCAGGACAAAGGCTGTATTTTCCATCTCTGGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS GCA 72 bp | CTTCATTCCAGACGTGAAAATTCCACACGCTATCACTaGCTTTCTCCAGGGGATTTCCCATGGCATCGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: LHSRRENSTRYH*LSPGDFPWHRS Trigger: ACTACGATGCCATGGGAAATCCCCTGGAGAAAGGCAGTGATAGCGTGTGGAATTTTCACGTCTGGAATGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS GCA 72 bp | CCCTTCTGGATTCCTCGAAGATGTTGCGCCGAAAGATaGGTTAGGTTTGAGTTTGTCCAAAGCCTTTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PFWIPRRCCAER*VRFEFVQSLLV Trigger: CACCAAAAGGCTTTGGACAAACTCAAACCTAACGCATCTTTCGGCGCAACATCTTCGAGGAATCCAGAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS GCA 72 bp | CTCCTTGTCTTCCCCTTCTGGATTCCTCGAAGATGTTaGGCCGAAAGATGCGTTAGGTTTGAGTTTGTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LLVFPFWIPRRC*AERCVRFEFVQ Trigger: TTGGACAAACTCAAACCTAACGCATCTTTCGGCGCAACATCTTCGAGGAATCCAGAAGGGGAAGACAAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS GCA 72 bp | TTTGAGCATCAGGGACAGACTGACTTCTTTGCCTACTaGCAGTATCCCCGTGACCTTGAACTTCCCAGAAAT | + |
|
Preference number: 6 (lower is better) Translates to: FEHQGQTDFFAY*QYPRDLELPRN Trigger: ATTTCTGGGAAGTTCAAGGTCACGGGGATACTGGCAGTAGGCAAAGAAGTCAGTCTGTCCCTGATGCTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CAA 72 bp | CCACTCCAGTTCCCAGAAATAACACCGTTGTCATCATaGCCATTAATCATGGCACTCAGCACCCGGCAAACA | + |
|
Preference number: 6 (lower is better) Translates to: PLQFPEITPLSS*PLIMALSTRQT Trigger: TGTTTGCCGGGTGCTGAGTGCCATGATTAATGGCAATGATGACAACGGTGTTATTTCTGGGAACTGGAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CAA 72 bp | AAGATCATGTCAAAATTCCGGTCCACATCACCGGCTTaGATTGCATTAACGGAAGCTGGACCGCACTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: KIMSKFRSTSPA*IALTEAGPHWN Trigger: GTTCCAGTGCGGTCCAGCTTCCGTTAATGCAATCAAAGCCGGTGATGTGGACCGGAATTTTGACATGATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CAA 90 bp | GGATTCCTCGAAGATGTTGCGCCGAAAGATGCGTTAGGTTTGAGTTaGTCCAAAGCCTTTTGGTGCACTTGTCTTTCCTCACTGGAACCT | + |
|
Preference number: 6 (lower is better) Translates to: GFLEDVAPKDALGLS*SKAFWCTCLSSLEP Trigger: AGGTTCCAGTGAGGAAAGACAAGTGCACCAAAAGGCTTTGGACAAACTCAAACCTAACGCATCTTTCGGCGCAACATCTTCGAGGAATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CAA 90 bp | CCTTCTGGATTCCTCGAAGATGTTGCGCCGAAAGATGCGTTAGGTTaGAGTTTGTCCAAAGCCTTTTGGTGCACTTGTCTTTCCTCACTG | + |
|
Preference number: 6 (lower is better) Translates to: PSGFLEDVAPKDALG*SLSKAFWCTCLSSL Trigger: CAGTGAGGAAAGACAAGTGCACCAAAAGGCTTTGGACAAACTCAAACCTAACGCATCTTTCGGCGCAACATCTTCGAGGAATCCAGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
||
| CDS CAA 72 bp | TGCACTTGTCTTTCCTCACTGGAACCTTCTGGATACTaGTACTTGTCTGTGACATCCATGCGAGAGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CTCLSSLEPSGY*YLSVTSMRELL Trigger: CAGCAACTCTCGCATGGATGTCACAGACAAGTACAAGTATCCAGAAGGTTCCAGTGAGGAAAGACAAGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CAA 72 bp | CAGGATACTGTATTTCTTCTTCAGGATCCAAGGATATaGTGGCTGAGTCCTTCCACACTTCGTGGACAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: QDTVFLLQDPRI*WLSPSTLRGQG Trigger: CCCTTGTCCACGAAGTGTGGAAGGACTCAGCCACAATATCCTTGGATCCTGAAGAAGAAATACAGTATCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CAA 90 bp | GTGGAAACAATGAAATTCAGATCTTCTCCAGACTCAAGACTTCGGTaGCAGACTAATATTATCTCCCAGGGCTGTCCTCTCCGCACAATG | + |
|
Preference number: 6 (lower is better) Translates to: VETMKFRSSPDSRLR*QTNIISQGCPLRTM Trigger: CATTGTGCGGAGAGGACAGCCCTGGGAGATAATATTAGTCTGCAACCGAAGTCTTGAGTCTGGAGAAGATCTGAATTTCATTGTTTCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CAA 90 bp | TGTTGCGCCGAAAGATGCGTTAGGTTTGAGTTTGTCCAAAGCCTTTaGGTGCACTTGTCTTTCCTCACTGGAACCTTCTGGATACTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: CCAERCVRFEFVQSL*VHLSFLTGTFWILV Trigger: TACAAGTATCCAGAAGGTTCCAGTGAGGAAAGACAAGTGCACCAAAAGGCTTTGGACAAACTCAAACCTAACGCATCTTTCGGCGCAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CAA 90 bp | GCTGTCATGTTCATCGTCACTGTCTTCCTGTCATTAGTCATGTTTTaGAGCATCAGGGACAGACTGACTTCTTTGCCTACTGCCAGTATC | + |
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Preference number: 6 (lower is better) Translates to: AVMFIVTVFLSLVMF*SIRDRLTSLPTASI Trigger: GATACTGGCAGTAGGCAAAGAAGTCAGTCTGTCCCTGATGCTCAAAAACATGACTAATGACAGGAAGACAGTGACGATGAACATGACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CAA 90 bp | CGATCTTCACAGGATACTGTATTTCTTCTTCAGGATCCAAGGATATaGTGGCTGAGTCCTTCCACACTTCGTGGACAAGGGTACCATTGT | + |
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Preference number: 6 (lower is better) Translates to: RSSQDTVFLLQDPRI*WLSPSTLRGQGYHC Trigger: ACAATGGTACCCTTGTCCACGAAGTGTGGAAGGACTCAGCCACAATATCCTTGGATCCTGAAGAAGAAATACAGTATCCTGTGAAGATCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS TCA 72 bp | CTGTATTTCTTCTTCAGGATCCAAGGATATTGTGGCTaGGTCCTTCCACACTTCGTGGACAAGGGTACCATT | + |
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Preference number: 6 (lower is better) Translates to: LYFFFRIQGYCG*VLPHFVDKGTI Trigger: AATGGTACCCTTGTCCACGAAGTGTGGAAGGACTCAGCCACAATATCCTTGGATCCTGAAGAAGAAATACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CCA 72 bp | GAAAATACAGCCTTTGTCCTGGCTGACTCAGAGGGTTaGGGACCTGTGGAAACAATGAAATTCAGATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: ENTAFVLADSEG*GPVETMKFRSS Trigger: AGAAGATCTGAATTTCATTGTTTCCACAGGTCCCCAACCCTCTGAGTCAGCCAGGACAAAGGCTGTATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CCA 72 bp | CTTTTGGTGCACTTGTCTTTCCTCACTGGAACCTTCTaGATACTTGTACTTGTCTGTGACATCCATGCGAGA | + |
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Preference number: 6 (lower is better) Translates to: LLVHLSFLTGTF*ILVLVCDIHAR Trigger: TCTCGCATGGATGTCACAGACAAGTACAAGTATCCAGAAGGTTCCAGTGAGGAAAGACAAGTGCACCAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CAA 72 bp | TTCCTCGAAGATGTTGCGCCGAAAGATGCGTTAGGTTaGAGTTTGTCCAAAGCCTTTTGGTGCACTTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: FLEDVAPKDALG*SLSKAFWCTCL Trigger: AAGACAAGTGCACCAAAAGGCTTTGGACAAACTCAAACCTAACGCATCTTTCGGCGCAACATCTTCGAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CAA 90 bp | TGTGCTGCCCACATAGATGATGCCAGAATCTTCTTCAACATACTCTaGTCTTTCGGCGTGGTTACTCATAAAGACATCATCCGCTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: CAAHIDDARIFFNIL*SFGVVTHKDIIRLQ Trigger: TTGCAAGCGGATGATGTCTTTATGAGTAACCACGCCGAAAGACAAGAGTATGTTGAAGAAGATTCTGGCATCATCTATGTGGGCAGCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CCA 72 bp | CCAGAATCTTCTTCAACATACTCTTGTCTTTCGGCGTaGTTACTCATAAAGACATCATCCGCTTGCAACCAC | + |
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Preference number: 6 (lower is better) Translates to: PESSSTYSCLSA*LLIKTSSACNH Trigger: GTGGTTGCAAGCGGATGATGTCTTTATGAGTAACCACGCCGAAAGACAAGAGTATGTTGAAGAAGATTCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CAA 72 bp | ATGAAATTCAGATCTTCTCCAGACTCAAGACTTCGGTaGCAGACTAATATTATCTCCCAGGGCTGTCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: MKFRSSPDSRLR*QTNIISQGCPL Trigger: GAGAGGACAGCCCTGGGAGATAATATTAGTCTGCAACCGAAGTCTTGAGTCTGGAGAAGATCTGAATTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS TCA 72 bp | CGGATCATGTTGTCTGCCTTCAGGTATCTCTCATACTaGGAGTATGCGATCTTCACAGGATACTGTATTTCT | + |
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Preference number: 6 (lower is better) Translates to: RIMLSAFRYLSY*EYAIFTGYCIS Trigger: AGAAATACAGTATCCTGTGAAGATCGCATACTCTCAGTATGAGAGATACCTGAAGGCAGACAACATGATCCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CAA 72 bp | TTACTCATAAAGACATCATCCGCTTGCAACCACGGGTaGAAGAGCATTATAAACGTGCCAAGTTTCAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: LLIKTSSACNHG*KSIINVPSFRE Trigger: CTCTCTGAAACTTGGCACGTTTATAATGCTCTTCAACCCGTGGTTGCAAGCGGATGATGTCTTTATGAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS CAA 72 bp | TTCATCGTCACTGTCTTCCTGTCATTAGTCATGTTTTaGAGCATCAGGGACAGACTGACTTCTTTGCCTACT | + |
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Preference number: 6 (lower is better) Translates to: FIVTVFLSLVMF*SIRDRLTSLPT Trigger: AGTAGGCAAAGAAGTCAGTCTGTCCCTGATGCTCAAAAACATGACTAATGACAGGAAGACAGTGACGATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS TCA 72 bp | CAACCATGCCAATTCGATTTGTGCTGCCCACATAGATaGTGCCAGAATCTTCTTCAACATACTCTTGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: QPCQFDLCCPHR*CQNLLQHTLVF Trigger: AAAGACAAGAGTATGTTGAAGAAGATTCTGGCATCATCTATGTGGGCAGCACAAATCGAATTGGCATGGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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| CDS GCA 72 bp | GTTATTTCTATTATTATAGATCCAAGTGATGCGATCTaGATTAACCTCCGCGAAGATGAAGATCATGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: VISIIIDPSDAI*INLREDEDHVK Trigger: TTTGACATGATCTTCATCTTCGCGGAGGTTAATGCAGATCGCATCACTTGGATCTATAATAATAGAAATAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110299.3 |
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