Pregenerated sensors for TGM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037820Ensembl transcript IDs: ENSMUST00000103122.10, ENSMUST00000174718.2
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTCGGGTACAGGTCTGGTGCAGTGTCTCCTTCCCAGAAGTGCACTaGGCCTGGGCAGCAGGCTTTAGAAGTATAGGGCCAGGAGACCCC | + |
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Preference number: 1 (lower is better) Translates to: PRVQVWCSVSFPEVH*AWAAGFRSIGPGDP Trigger: GGGGTCTCCTGGCCCTATACTTCTAAAGCCTGCTGCCCAGGCTCAGTGCACTTCTGGGAAGGAGACACTGCACCAGACCTGTACCCGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR CCA 90 bp | CAGGCTCATCCCCAGATAGCCTCTCTGACCCGCTCAGGTCAAAGCTaGTGTCACAGATGGAGTCCCTGTATTCAAGTTCACCCACTGGCC | + |
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Preference number: 1 (lower is better) Translates to: QAHPQIASLTRSGQS*CHRWSPCIQVHPLA Trigger: GGCCAGTGGGTGAACTTGAATACAGGGACTCCATCTGTGACACCAGCTTTGACCTGAGCGGGTCAGAGAGGCTATCTGGGGATGAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR TCA 90 bp | ACAGATGGAGTCCCTGTATTCAAGTTCACCCACTGGCCCTGCAAGTaGTGGCCTGCCTACTGTCCCAGTACAGCACAGCAGCCTCAGTTT | + |
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Preference number: 1 (lower is better) Translates to: TDGVPVFKFTHWPCK*WPAYCPSTAQQPQF Trigger: AAACTGAGGCTGCTGTGCTGTACTGGGACAGTAGGCAGGCCATCACTTGCAGGGCCAGTGGGTGAACTTGAATACAGGGACTCCATCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR TCA 90 bp | CTTGTGGATAGTCCTGGAACTGCATCTGAGGAACCCAGTCATAGGTaGGAAGCAGGTCACCTCGGGTACAGGTCTGGTGCAGTGTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: LVDSPGTASEEPSHR*EAGHLGYRSGAVSP Trigger: AGGAGACACTGCACCAGACCTGTACCCGAGGTGACCTGCTTCTCACCTATGACTGGGTTCCTCAGATGCAGTTCCAGGACTATCCACAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR CCA 90 bp | CAGATAGCCTCTCTGACCCGCTCAGGTCAAAGCTGGTGTCACAGATaGAGTCCCTGTATTCAAGTTCACCCACTGGCCCTGCAAGTGATG | + |
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Preference number: 1 (lower is better) Translates to: QIASLTRSGQSWCHR*SPCIQVHPLALQVM Trigger: CATCACTTGCAGGGCCAGTGGGTGAACTTGAATACAGGGACTCCATCTGTGACACCAGCTTTGACCTGAGCGGGTCAGAGAGGCTATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR TCA 90 bp | TTCCTTCATCGAGCCAGTGGGCTCACGGTCCCTTTGTGCTTGCGCTaGGGCTCCAGAGACAGTTCAAACAATGCAGAGATACAGAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: FLHRASGLTVPLCLR*GSRDSSNNAEIQSA Trigger: AGCACTCTGTATCTCTGCATTGTTTGAACTGTCTCTGGAGCCTCAGCGCAAGCACAAAGGGACCGTGAGCCCACTGGCTCGATGAAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR GCA 90 bp | TTCGGTTCCTTCATCGAGCCAGTGGGCTCACGGTCCCTTTGTGCTTaGGCTGAGGCTCCAGAGACAGTTCAAACAATGCAGAGATACAGA | + |
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Preference number: 1 (lower is better) Translates to: FGSFIEPVGSRSLCA*AEAPETVQTMQRYR Trigger: TCTGTATCTCTGCATTGTTTGAACTGTCTCTGGAGCCTCAGCGCAAGCACAAAGGGACCGTGAGCCCACTGGCTCGATGAAGGAACCGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR TCA 90 bp | AATAGATCCAGAGGAACAGGATTGGGCCAGAAGTACACTGTCTTCTaGAGAGGCCCCAGGCAGCCATGTCAGCCTGAATGGGGTGAAGTT | + |
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Preference number: 1 (lower is better) Translates to: NRSRGTGLGQKYTVF*RGPRQPCQPEWGEV Trigger: AACTTCACCCCATTCAGGCTGACATGGCTGCCTGGGGCCTCTTCAGAAGACAGTGTACTTCTGGCCCAATCCTGTTCCTCTGGATCTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR CCA 90 bp | ACAGCTAAGGGAACAGATGGGGAAATAGATCCAGAGGAACAGGATTaGGCCAGAAGTACACTGTCTTCTGAAGAGGCCCCAGGCAGCCAT | + |
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Preference number: 1 (lower is better) Translates to: TAKGTDGEIDPEEQD*ARSTLSSEEAPGSH Trigger: ATGGCTGCCTGGGGCCTCTTCAGAAGACAGTGTACTTCTGGCCCAATCCTGTTCCTCTGGATCTATTTCCCCATCTGTTCCCTTAGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR GCA 90 bp | ATGTGCTTTGAAAGCATGCCTACTGCCTGCTTGGAACCTGAAGCTTaGACAGACCAAAAGAAACAGAACCGTGTGGGGACAGGACAGATA | + |
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Preference number: 1 (lower is better) Translates to: MCFESMPTACLEPEA*TDQKKQNRVGTGQI Trigger: TATCTGTCCTGTCCCCACACGGTTCTGTTTCTTTTGGTCTGTGCAAGCTTCAGGTTCCAAGCAGGCAGTAGGCATGCTTTCAAAGCACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR-3UTR CCA 90 bp | CCAGGCTCTTCTCCGGGATTTCAGGGGATCCCAGAGACTCTGACCTCATCACCCGGGCCAGGAGACCCCTaGTTAAGCACTGCCCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: PGSSPGFQGIPETLTSSPGPGDP*LSTALV Trigger: CACCAGGGCAGTGCTTAACCAGGGGTCTCCTGGCCC...GGGTGATGAGGTCAGAGTCTCTGGGATCCCCTGAAATCCCGGAGAAGAGCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR-3UTR CCA 90 bp | CAGTATGTCCCTTCGCTCTTCTCCTGTGGTGTGGGGTCAATGGCCTGCCACCCCGCTGTAGGTCTGGCCTaGTCATCCAGGACTCCACCC | + |
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Preference number: 2 (lower is better) Translates to: QYVPSLFSCGVGSMACHPAVGLA*SSRTPP Trigger: GGGTGGAGTCCTGGATGACCAGGCCAGACCTACAGC...GGGGTGGCAGGCCATTGACCCCACACCACAGGAGAAGAGCGAAGGGACATACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174718.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGGCTCTTCTCCGGGATTTCAGGGGATCCCAGAGACTCTGACCTCATCACCCGAACCCAGTCATAGGTaGGAAGCAGGTCACCTCGGG | + |
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Preference number: 2 (lower is better) Translates to: PGSSPGFQGIPETLTSSPEPSHR*EAGHLG Trigger: CCCGAGGTGACCTGCTTCTCACCTATGACTGGGTTC...GGGTGATGAGGTCAGAGTCTCTGGGATCCCCTGAAATCCCGGAGAAGAGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR-3UTR CCA 90 bp | GGTACCCACTGTGTCGGCACAGGACCTTCCTCACAGCTAAGGGAACAGATGGGGAGGTTGAATGGGGGTTaGCAGGTGGTGGGGTTGAGT | + |
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Preference number: 2 (lower is better) Translates to: GTHCVGTGPSSQLREQMGRLNGG*QVVGLS Trigger: ACTCAACCCCACCACCTGCCAACCCCCATTCAACCT...CCCCATCTGTTCCCTTAGCTGTGAGGAAGGTCCTGTGCCGACACAGTGGGTACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR-3UTR CCA 90 bp | ATTGGGCCAGAAGTACACTGTCTTCTGAAGAGGCCCCAGGCAGCCATGTCAGCCAAAGACCAGGTTGAATaGGGGTTGGCAGGTGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: IGPEVHCLLKRPQAAMSAKDQVE*GLAGGG Trigger: CCCACCACCTGCCAACCCCCATTCAACCTGGTCTTT...GGCTGACATGGCTGCCTGGGGCCTCTTCAGAAGACAGTGTACTTCTGGCCCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR CAA 90 bp | AGTGATGGCCTGCCTACTGTCCCAGTACAGCACAGCAGCCTCAGTTaGTACCCTGAAGTTTCTCATGGATGTTCAGCAGGCTGGTGTCCC | + |
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Preference number: 2 (lower is better) Translates to: SDGLPTVPVQHSSLS*YPEVSHGCSAGWCP Trigger: GGGACACCAGCCTGCTGAACATCCATGAGAAACTTCAGGGTACAAACTGAGGCTGCTGTGCTGTACTGGGACAGTAGGCAGGCCATCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR-3UTR TCA 90 bp | CACTGTGTGAGTAGCTTGTGGATAGTCCTGGAACTGCATCTGAGGAACCCAGTCTTCCCAGAAGTGCACTaGGCCTGGGCAGCAGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: HCVSSLWIVLELHLRNPVFPEVH*AWAAGF Trigger: AAAGCCTGCTGCCCAGGCTCAGTGCACTTCTGGGAA...GACTGGGTTCCTCAGATGCAGTTCCAGGACTATCCACAAGCTACTCACACAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR-3UTR CCA 90 bp | AAAGCATGCCTACTGCCTGCTTGGAACCTGAAGCTTGCACAGACCAAAAGAAACCGCTCAGGTCAAAGCTaGTGTCACAGATGGAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: KACLLPAWNLKLAQTKRNRSGQS*CHRWSP Trigger: GGGACTCCATCTGTGACACCAGCTTTGACCTGAGCG...GTTTCTTTTGGTCTGTGCAAGCTTCAGGTTCCAAGCAGGCAGTAGGCATGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR-3UTR TCA 90 bp | CACGTTAAATGCATCAGTTTGATTCTTCCCAGGCTCTTCTCCGGGATTTCAGGGCCTCAGTTTGTACCCTaGAGTTTCTCATGGATGTTC | + |
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Preference number: 2 (lower is better) Translates to: HVKCISLILPRLFSGISGPQFVP*SFSWMF Trigger: GAACATCCATGAGAAACTTCAGGGTACAAACTGAGG...CCCTGAAATCCCGGAGAAGAGCCTGGGAAGAATCAAACTGATGCATTTAACGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR CCA 72 bp | ATGTCCCTTCGCTCTTCTCCTGTGGTGTGGGGTCAATaGCCTGCCACCCCTCATAGCCCGGCTGTAGGTCTG | + |
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Preference number: 3 (lower is better) Translates to: MSLRSSPVVWGQ*PATPHSPAVGL Trigger: CAGACCTACAGCCGGGCTATGAGGGGTGGCAGGCCATTGACCCCACACCACAGGAGAAGAGCGAAGGGACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174718.2 |
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| 3UTR TCA 72 bp | CAGGTCTGGTGCAGTGTCTCCTTCCCAGAAGTGCACTaGGCCTGGGCAGCAGGCTTTAGAAGTATAGGGCCA | + |
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Preference number: 3 (lower is better) Translates to: QVWCSVSFPEVH*AWAAGFRSIGP Trigger: TGGCCCTATACTTCTAAAGCCTGCTGCCCAGGCTCAGTGCACTTCTGGGAAGGAGACACTGCACCAGACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR TCA 72 bp | AGAGGAACAGGATTGGGCCAGAAGTACACTGTCTTCTaGAGAGGCCCCAGGCAGCCATGTCAGCCTGAATGG | + |
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Preference number: 3 (lower is better) Translates to: RGTGLGQKYTVF*RGPRQPCQPEW Trigger: CCATTCAGGCTGACATGGCTGCCTGGGGCCTCTTCAGAAGACAGTGTACTTCTGGCCCAATCCTGTTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR TCA 72 bp | AGTCCTGGAACTGCATCTGAGGAACCCAGTCATAGGTaGGAAGCAGGTCACCTCGGGTACAGGTCTGGTGCA | + |
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Preference number: 3 (lower is better) Translates to: SPGTASEEPSHR*EAGHLGYRSGA Trigger: TGCACCAGACCTGTACCCGAGGTGACCTGCTTCTCACCTATGACTGGGTTCCTCAGATGCAGTTCCAGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR TCA 72 bp | TCTCCAGCTCCCCGAACTCATTTCGGAAGTACTCGATaGGCAGGTTGCTGTTCTGGTCGTGGGCGGAGTTGT | + |
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Preference number: 3 (lower is better) Translates to: SPAPRTHFGSTR*AGCCSGRGRSC Trigger: ACAACTCCGCCCACGACCAGAACAGCAACCTGCTCATCGAGTACTTCCGAAATGAGTTCGGGGAGCTGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174718.2 |
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| 3UTR GCA 72 bp | ATTCAAGTTCACCCACTGGCCCTGCAAGTGATGGCCTaGCTACTGTCCCAGTACAGCACAGCAGCCTCAGTT | + |
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Preference number: 3 (lower is better) Translates to: IQVHPLALQVMA*LLSQYSTAASV Trigger: AACTGAGGCTGCTGTGCTGTACTGGGACAGTAGGCAGGCCATCACTTGCAGGGCCAGTGGGTGAACTTGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR CCA 72 bp | TCTCTGACCCGCTCAGGTCAAAGCTGGTGTCACAGATaGAGTCCCTGTATTCAAGTTCACCCACTGGCCCTG | + |
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Preference number: 3 (lower is better) Translates to: SLTRSGQSWCHR*SPCIQVHPLAL Trigger: CAGGGCCAGTGGGTGAACTTGAATACAGGGACTCCATCTGTGACACCAGCTTTGACCTGAGCGGGTCAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR CCA 72 bp | GCAGCAGGCTTTAGAAGTATAGGGCCAGGAGACCCCTaGTTAAGCACTGCCCTGGTGAAGAATGATCAAGCC | + |
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Preference number: 3 (lower is better) Translates to: AAGFRSIGPGDP*LSTALVKNDQA Trigger: GGCTTGATCATTCTTCACCAGGGCAGTGCTTAACCAGGGGTCTCCTGGCCCTATACTTCTAAAGCCTGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR-3UTR CAA 90 bp | CCACTGTGTCGGCACAGGACCTTCCTCACAGCTAAGGGAACAGATGGGGAAATATCCAGAGGAACAGGATaGGGCCAGAAGTACACTGTC | + |
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Preference number: 3 (lower is better) Translates to: PLCRHRTFLTAKGTDGEISRGTG*GQKYTV Trigger: GACAGTGTACTTCTGGCCCAATCCTGTTCCTCTGGA...TATTTCCCCATCTGTTCCCTTAGCTGTGAGGAAGGTCCTGTGCCGACACAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR TCA 72 bp | TGTCCCAGTACAGCACAGCAGCCTCAGTTTGTACCCTaGAGTTTCTCATGGATGTTCAGCAGGCTGGTGTCC | + |
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Preference number: 3 (lower is better) Translates to: CPSTAQQPQFVP*SFSWMFSRLVS Trigger: GGACACCAGCCTGCTGAACATCCATGAGAAACTTCAGGGTACAAACTGAGGCTGCTGTGCTGTACTGGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR GCA 72 bp | CCCAGCAGTGGAAGTTCCAGATCATCTCGCTCTTGTTaGTCTCCAGCTCCCCGAACTCATTTCGGAAGTACT | + |
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Preference number: 3 (lower is better) Translates to: PSSGSSRSSRSC*SPAPRTHFGST Trigger: AGTACTTCCGAAATGAGTTCGGGGAGCTGGAGAGCAACAAGAGCGAGATGATCTGGAACTTCCACTGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174718.2 |
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| 3UTR CCA 72 bp | CAAGCCCAGAAGAGGAGGATAGAGTGTAGCTCTCCTTaGGGCTTAAACCCAAGCTCTGACTCCCAGTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: QAQKRRIECSSP*GLNPSSDSQFS Trigger: AGAGAACTGGGAGTCAGAGCTTGGGTTTAAGCCCCAAGGAGAGCTACACTCTATCCTCCTCTTCTGGGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR GCA 72 bp | CGGTGCGATCCTCTGTGTAAAGCAGAACACGTTAAATaGATCAGTTTGATTCTTCCCAGGCTCTTCTCCGGG | + |
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Preference number: 3 (lower is better) Translates to: RCDPLCKAEHVK*ISLILPRLFSG Trigger: CCCGGAGAAGAGCCTGGGAAGAATCAAACTGATGCATTTAACGTGTTCTGCTTTACACAGAGGATCGCACCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR-3UTR CAA 90 bp | ACTGCCCTGGTGAAGAATGATCAAGCCCAGAAGAGGAGGATAGAGTGTAGCTCTCACAGCAGCCTCAGTTaGTACCCTGAAGTTTCTCAT | + |
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Preference number: 3 (lower is better) Translates to: TALVKNDQAQKRRIECSSHSSLS*YPEVSH Trigger: ATGAGAAACTTCAGGGTACAAACTGAGGCTGCTGTG...AGAGCTACACTCTATCCTCCTCTTCTGGGCTTGATCATTCTTCACCAGGGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR CCA 72 bp | TTGTACCCTGAAGTTTCTCATGGATGTTCAGCAGGCTaGTGTCCCTGTGAGAACTTAAGGTGCCTAGCACAT | + |
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Preference number: 3 (lower is better) Translates to: LYPEVSHGCSAG*CPCENLRCLAH Trigger: ATGTGCTAGGCACCTTAAGTTCTCACAGGGACACCAGCCTGCTGAACATCCATGAGAAACTTCAGGGTACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR TCA 72 bp | CTCTGTGTAAAGCAGAACACGTTAAATGCATCAGTTTaGTTCTTCCCAGGCTCTTCTCCGGGATTTCAGGGG | + |
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Preference number: 3 (lower is better) Translates to: LCVKQNTLNASV*FFPGSSPGFQG Trigger: CCCCTGAAATCCCGGAGAAGAGCCTGGGAAGAATCAAACTGATGCATTTAACGTGTTCTGCTTTACACAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| 3UTR CCA 72 bp | TTCACATGTGCTTTGAAAGCATGCCTACTGCCTGCTTaGAACCTGAAGCTTGCACAGACCAAAAGAAACAGA | + |
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Preference number: 3 (lower is better) Translates to: FTCALKACLLPA*NLKLAQTKRNR Trigger: TCTGTTTCTTTTGGTCTGTGCAAGCTTCAGGTTCCAAGCAGGCAGTAGGCATGCTTTCAAAGCACATGTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS-3UTR TCA 90 bp | GGCCCTGCAAGTGATGGCCTGCCTACTGTCCCAGTACAGCACAGCAGCCTCAGTGGTGGTTGGCCTTGGTaGAGACTTCCCTCTCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: GPASDGLPTVPVQHSSLSGGWPW*RLPSPR Trigger: CCGAGGAGAGGGAAGTCTTCACCAAGGCCAACCACC...ACTGAGGCTGCTGTGCTGTACTGGGACAGTAGGCAGGCCATCACTTGCAGGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS-3UTR GCA 90 bp | CAGGTCACCTCGGGTACAGGTCTGGTGCAGTGTCTCCTTCCCAGAAGTGCACTGGCGGGCCTTGGTCCCTaGCTCTTCACTGGGATCTGG | + |
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Preference number: 4 (lower is better) Translates to: QVTSGTGLVQCLLPRSALAGLGP*LFTGIW Trigger: CCAGATCCCAGTGAAGAGGCAGGGACCAAGGCCCGC...CAGTGCACTTCTGGGAAGGAGACACTGCACCAGACCTGTACCCGAGGTGACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS-3UTR CCA 90 bp | TACAGAGTGCTGGTGATGGCTCTCCTCTTACCCTTGCCAGGTACCCACTGTGTCCGCGGCCCACATAGATaGGACTGCTGCGGCGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: YRVLVMALLLPLPGTHCVRGPHR*DCCGVS Trigger: GCTCACGCCGCAGCAGTCCCATCTATGTGGGCCGCG...GACACAGTGGGTACCTGGCAAGGGTAAGAGGAGAGCCATCACCAGCACTCTGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS-3UTR CCA 90 bp | GGTACCCACTGTGTCGGCACAGGACCTTCCTCACAGCTAAGGGAACAGATGGGGGCTGTAGGTCTGGCCTaGTCATCCAGGACTCCACCC | + |
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Preference number: 4 (lower is better) Translates to: GTHCVGTGPSSQLREQMGAVGLA*SSRTPP Trigger: GGGTGGAGTCCTGGATGACCAGGCCAGACCTACAGC...CCCCATCTGTTCCCTTAGCTGTGAGGAAGGTCCTGTGCCGACACAGTGGGTACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS-3UTR TCA 90 bp | CCAGGCTCTTCTCCGGGATTTCAGGGGATCCCAGAGACTCTGACCTCATCACCCTCAGGTCTCCCTCCTTaGTGGCTCGCACTGAGACTG | + |
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Preference number: 4 (lower is better) Translates to: PGSSPGFQGIPETLTSSPSGLPP*WLALRL Trigger: CAGTCTCAGTGCGAGCCATCAAGGAGGGAGACCTGA...GGGTGATGAGGTCAGAGTCTCTGGGATCCCCTGAAATCCCGGAGAAGAGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS-3UTR GCA 90 bp | GGACTCCACCCAGCAGTGGAAGTTCCAGATCATCTCGCTCTTGTTGCTCTCCAGGCGGGCCTTGGTCCCTaGCTCTTCACTGGGATCTGG | + |
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Preference number: 4 (lower is better) Translates to: GLHPAVEVPDHLALVALQAGLGP*LFTGIW Trigger: CCAGATCCCAGTGAAGAGGCAGGGACCAAGGCCCGC...CTGGAGAGCAACAAGAGCGAGATGATCTGGAACTTCCACTGCTGGGTGGAGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174718.2 |
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| CDS-3UTR CCA 90 bp | GCAGTGGAAGTTCCAGATCATCTCGCTCTTGTTGCTCTCCAGCTCCCCGAACTCCATAGGTCGGCCGTGTaGTGGTCACGGCCATTGGCC | + |
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Preference number: 4 (lower is better) Translates to: AVEVPDHLALVALQLPELHRSAV*WSRPLA Trigger: GGCCAATGGCCGTGACCACCACACGGCCGACCTATG...GAGTTCGGGGAGCTGGAGAGCAACAAGAGCGAGATGATCTGGAACTTCCACTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174718.2 |
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| CDS-3UTR CCA 90 bp | TGGCTCTCCTCTTACCCTTGCCAGGTACCCACTGTGTCGGCACAGGACCTTCCTGTAGCTGTTGGCAGCTaGTTCGATGAGAAGGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: WLSSYPCQVPTVSAQDLPVAVGS*FDEKAP Trigger: CGGGGCCTTCTCATCGAACCAGCTGCCAACAGCTAC...AGGAAGGTCCTGTGCCGACACAGTGGGTACCTGGCAAGGGTAAGAGGAGAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS-3UTR TCA 90 bp | GGCCCTGCAAGTGATGGCCTGCCTACTGTCCCAGTACAGCACAGCAGCCTCAGTACTTGTAGGTATGGGTaGTGTCCTCCCGGTCATCAC | + |
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Preference number: 4 (lower is better) Translates to: GPASDGLPTVPVQHSSLSTCRYG*CPPGHH Trigger: GTGATGACCGGGAGGACATCACCCATACCTACAAGT...ACTGAGGCTGCTGTGCTGTACTGGGACAGTAGGCAGGCCATCACTTGCAGGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS-3UTR TCA 90 bp | TGGCTCTCCTCTTACCCTTGCCAGGTACCCACTGTGTCGGCACAGGACCTTCCTCACCTTGATGAGGTTTaGCTCTGTCAGGCACCCGCT | + |
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Preference number: 4 (lower is better) Translates to: WLSSYPCQVPTVSAQDLPHLDEV*LCQAPA Trigger: AGCGGGTGCCTGACAGAGTCAAACCTCATCAAGGTG...AGGAAGGTCCTGTGCCGACACAGTGGGTACCTGGCAAGGGTAAGAGGAGAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS-3UTR GCA 90 bp | TGGCTCTCCTCTTACCCTTGCCAGGTACCCACTGTGTCGGCACAGGACCTTCCTCGAAGTCGTTGCCCATaGTCATACTGTCCCCCACTC | + |
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Preference number: 4 (lower is better) Translates to: WLSSYPCQVPTVSAQDLPRSRCP*SYCPPL Trigger: GAGTGGGGGACAGTATGAGCATGGGCAACGACTTCG...AGGAAGGTCCTGTGCCGACACAGTGGGTACCTGGCAAGGGTAAGAGGAGAGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS-3UTR CCA 90 bp | GCTCTCCTCTTACCCTTGCCAGGTACCCACTGTGTCGGCACAGGACCTTCCTCACAGGGGATCGGAAAGTaGGTTCTTCAGGGACACCTC | + |
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Preference number: 4 (lower is better) Translates to: ALLLPLPGTHCVGTGPSSQGIGK*VLQGHL Trigger: GAGGTGTCCCTGAAGAACCCACTTTCCGATCCCCTG...TGAGGAAGGTCCTGTGCCGACACAGTGGGTACCTGGCAAGGGTAAGAGGAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS-3UTR TCA 90 bp | CAGGTCACCTCGGGTACAGGTCTGGTGCAGTGTCTCCTTCCCAGAAGTGCACTGCATTGTAGAGCAGGATaGAGTGGCCCAGCACAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QVTSGTGLVQCLLPRSALHCRAG*SGPAQS Trigger: GCTTTGTGCTGGGCCACTTCATCCTGCTCTACAATG...CAGTGCACTTCTGGGAAGGAGACACTGCACCAGACCTGTACCCGAGGTGACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR GCA 90 bp | GCTCATTATCTTAGGATAAAGACCAGGTTGAATGGGGGTTGGCAGGTGGTGGGGTGTGCAGGCCACCGCTaGAAACACCCAGCACTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AHYLRIKTRLNGGWQVVGCAGHR*KHPALP Trigger: GGGCAGTGCTGGGTGTTTGCAGCGGTGGCCTGCACA...CCCCACCACCTGCCAACCCCCATTCAACCTGGTCTTTATCCTAAGATAATGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR TCA 90 bp | ACTGCCCTGGTGAAGAATGATCAAGCCCAGAAGAGGAGGATAGAGTGTAGCTCTGCACCCCGTTGTAGCTaGCAGTGCGGGCACAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TALVKNDQAQKRRIECSSAPRCS*QCGHRA Trigger: TGCTCTGTGCCCGCACTGTCAGCTACAACGGGGTGC...AGAGCTACACTCTATCCTCCTCTTCTGGGCTTGATCATTCTTCACCAGGGCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CCA 90 bp | TGTAGGTCTGGCCTGGTCATCCAGGACTCCACCCAGCAGTGGAAGTTCCAGATCGGTGGTCACGGCCATTaGCCTGAATCTCCAAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: CRSGLVIQDSTQQWKFQIGGHGH*PESPNH Trigger: GTGATTTGGAGATTCAGGCCAATGGCCGTGACCACC...GATCTGGAACTTCCACTGCTGGGTGGAGTCCTGGATGACCAGGCCAGACCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174718.2 |
||
| CDS-3UTR CCA 90 bp | TTGTGGATAGTCCTGGAACTGCATCTGAGGAACCCAGTCATAGGTGAGAAGCAGCATAGGTCGGCCGTGTaGTGGTCACGGCCATTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LWIVLELHLRNPVIGEKQHRSAV*WSRPLA Trigger: GGCCAATGGCCGTGACCACCACACGGCCGACCTATG...CTGCTTCTCACCTATGACTGGGTTCCTCAGATGCAGTTCCAGGACTATCCACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CCA 90 bp | AGGTCTGGCCTGGTCATCCAGGACTCCACCCAGCAGTGGAAGTTCCAGATCATCAGGACATTGTCCTGTTaGTCCAGCACTGAGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: RSGLVIQDSTQQWKFQIIRTLSC*SSTEAD Trigger: GTCAGCCTCAGTGCTGGACCAACAGGACAATGTCCT...GATGATCTGGAACTTCCACTGCTGGGTGGAGTCCTGGATGACCAGGCCAGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174718.2 |
||
| CDS-3UTR TCA 90 bp | ATTGGGCCAGAAGTACACTGTCTTCTGAAGAGGCCCCAGGCAGCCATGTCAGCCTTCGGAAGTACTCGATaGGCAGGTTGCTGTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IGPEVHCLLKRPQAAMSAFGSTR*AGCCSG Trigger: ACCAGAACAGCAACCTGCTCATCGAGTACTTCCGAA...GGCTGACATGGCTGCCTGGGGCCTCTTCAGAAGACAGTGTACTTCTGGCCCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR TCA 90 bp | AGCACTGCCCTGGTGAAGAATGATCAAGCCCAGAAGAGGAGGATAGAGTGTAGCCAGCCCCCTCCACAGTaGAGATGCAGTCATACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: STALVKNDQAQKRRIECSQPPPQ*RCSHTG Trigger: CCCTGTATGACTGCATCTTCACTGTGGAGGGGGCTG...GCTACACTCTATCCTCCTCTTCTGGGCTTGATCATTCTTCACCAGGGCAGTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CCA 90 bp | TGGCTCTCCTCTTACCCTTGCCAGGTACCCACTGTGTCGGCACAGGACCTTCCTTTCAGCTTGTCACACTaGAAGTTCACCACCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WLSSYPCQVPTVSAQDLPFSLSH*KFTTSL Trigger: CAAGCTGGTGGTGAACTTCCAGTGTGACAAGCTGAA...AGGAAGGTCCTGTGCCGACACAGTGGGTACCTGGCAAGGGTAAGAGGAGAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR TCA 90 bp | CACTGTGTGAGTAGCTTGTGGATAGTCCTGGAACTGCATCTGAGGAACCCAGTCCCAGGACCCGGATCTTaGTTTCGGGATTCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HCVSSLWIVLELHLRNPVPGPGS*FRDSPG Trigger: ACCTGGAGAATCCCGAAATCAAGATCCGGGTCCTGG...GACTGGGTTCCTCAGATGCAGTTCCAGGACTATCCACAAGCTACTCACACAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR GCA 90 bp | CACTGTGTGAGTAGCTTGTGGATAGTCCTGGAACTGCATCTGAGGAACCCAGTCACAGACCCATCTTCCTaGCGGATCCAGTCCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: HCVSSLWIVLELHLRNPVTDPSS*RIQSTT Trigger: TGTGGTGGACTGGATCCGGCAGGAAGATGGGTCTGT...GACTGGGTTCCTCAGATGCAGTTCCAGGACTATCCACAAGCTACTCACACAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR GCA 90 bp | TATTCAAGTTCACCCACTGGCCCTGCAAGTGATGGCCTGCCTACTGTCCCAGTACCTCAGCCACCAGTTTaGGGTTTTGCTTGGGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YSSSPTGPASDGLPTVPVPQPPV*GFAWVL Trigger: GAGAACCCAAGCAAAACCGCAAACTGGTGGCTGAGG...TACTGGGACAGTAGGCAGGCCATCACTTGCAGGGCCAGTGGGTGAACTTGAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CCA 90 bp | CCACTGTGTCGGCACAGGACCTTCCTCACAGCTAAGGGAACAGATGGGGAAATAGGTGGTCACGGCCATTaGCCTGAATCTCCAAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLCRHRTFLTAKGTDGEIGGHGH*PESPNH Trigger: GTGATTTGGAGATTCAGGCCAATGGCCGTGACCACC...TATTTCCCCATCTGTTCCCTTAGCTGTGAGGAAGGTCCTGTGCCGACACAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CCA 90 bp | CACTGTGTGAGTAGCTTGTGGATAGTCCTGGAACTGCATCTGAGGAACCCAGTCAGCACCAGTTTCTCTTaGCATAGGTCGGCCGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HCVSSLWIVLELHLRNPVSTSFS*HRSAVW Trigger: CCACACGGCCGACCTATGCCAAGAGAAACTGGTGCT...GACTGGGTTCCTCAGATGCAGTTCCAGGACTATCCACAAGCTACTCACACAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CCA 90 bp | AAAGCATGCCTACTGCCTGCTTGGAACCTGAAGCTTGCACAGACCAAAAGAAACCAGACTTCTGCTCCTTaGTCAGGCCAGCCCCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KACLLPAWNLKLAQTKRNQTSAP*SGQPPP Trigger: TGGAGGGGGCTGGCCTGACCAAGGAGCAGAAGTCTG...GTTTCTTTTGGTCTGTGCAAGCTTCAGGTTCCAAGCAGGCAGTAGGCATGCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CCA 90 bp | TATTCAAGTTCACCCACTGGCCCTGCAAGTGATGGCCTGCCTACTGTCCCAGTATTCACCACCAGCTTGTaGAGGCCAATATCAGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: YSSSPTGPASDGLPTVPVFTTSL*RPISVG Trigger: CCCGACTGATATTGGCCTCCACAAGCTGGTGGTGAA...TACTGGGACAGTAGGCAGGCCATCACTTGCAGGGCCAGTGGGTGAACTTGAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| 3UTR CAA 72 bp | CTGCCTACTGTCCCAGTACAGCACAGCAGCCTCAGTTaGTACCCTGAAGTTTCTCATGGATGTTCAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPTVPVQHSSLS*YPEVSHGCSAG Trigger: GCCTGCTGAACATCCATGAGAAACTTCAGGGTACAAACTGAGGCTGCTGTGCTGTACTGGGACAGTAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| 3UTR CAA 72 bp | ACCCAGCAGTGGAAGTTCCAGATCATCTCGCTCTTGTaGCTCTCCAGCTCCCCGAACTCATTTCGGAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TQQWKFQIISLL*LSSSPNSFRKY Trigger: GTACTTCCGAAATGAGTTCGGGGAGCTGGAGAGCAACAAGAGCGAGATGATCTGGAACTTCCACTGCTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174718.2 |
||
| CDS-3UTR TCA 90 bp | TTCCAGATCATCTCGCTCTTGTTGCTCTCCAGCTCCCCGAACTCATTTCGGAAGCATTGTAGAGCAGGATaGAGTGGCCCAGCACAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FQIISLLLLSSSPNSFRKHCRAG*SGPAQS Trigger: GCTTTGTGCTGGGCCACTTCATCCTGCTCTACAATG...CTTCCGAAATGAGTTCGGGGAGCTGGAGAGCAACAAGAGCGAGATGATCTGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174718.2 |
||
| CDS-3UTR GCA 90 bp | ATTGGGCCAGAAGTACACTGTCTTCTGAAGAGGCCCCAGGCAGCCATGTCAGCCTGTCTCCTCTTTCTCTaGCAGTTTGTTCAGGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: IGPEVHCLLKRPQAAMSACLLFL*QFVQVV Trigger: AACCACCTGAACAAACTGGCAGAGAAAGAGGAGACA...GGCTGACATGGCTGCCTGGGGCCTCTTCAGAAGACAGTGTACTTCTGGCCCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR GCA 90 bp | ACTGCCCTGGTGAAGAATGATCAAGCCCAGAAGAGGAGGATAGAGTGTAGCTCTTCTCCGAGGTGTCGTTaGCGATGTGGGCAAACACGT | + |
|
Preference number: 4 (lower is better) Translates to: TALVKNDQAQKRRIECSSSPRCR*RCGQTR Trigger: ACGTGTTTGCCCACATCGGCAACGACACCTCGGAGA...AGAGCTACACTCTATCCTCCTCTTCTGGGCTTGATCATTCTTCACCAGGGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR GCA 90 bp | TACAGAGTGCTGGTGATGGCTCTCCTCTTACCCTTGCCAGGTACCCACTGTGTCGGATTCGAAGTGGGATaGTGTTCTCAGAGTAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YRVLVMALLLPLPGTHCVGFEVG*CSQSRD Trigger: ATCCCTACTCTGAGAACAGCATCCCACTTCGAATCC...GACACAGTGGGTACCTGGCAAGGGTAAGAGGAGAGCCATCACCAGCACTCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR GCA 90 bp | TTGTGGATAGTCCTGGAACTGCATCTGAGGAACCCAGTCATAGGTGAGAAGCAGACTTCCACAGACTTCTaGTCCTTGGTCAGGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LWIVLELHLRNPVIGEKQTSTDF*SLVRPA Trigger: GGCTGGCCTGACCAAGGAGCAGAAGTCTGTGGAAGT...CTGCTTCTCACCTATGACTGGGTTCCTCAGATGCAGTTCCAGGACTATCCACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CCA 90 bp | CCACTGTGTCGGCACAGGACCTTCCTCACAGCTAAGGGAACAGATGGGGAAATAAGGGTGCATCATACTTaGTACTCAGGTCTCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLCRHRTFLTAKGTDGEIRVHHT*YSGLPP Trigger: AGGAGGGAGACCTGAGTACCAAGTATGATGCACCCT...TATTTCCCCATCTGTTCCCTTAGCTGTGAGGAAGGTCCTGTGCCGACACAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR TCA 90 bp | AAAGCATGCCTACTGCCTGCTTGGAACCTGAAGCTTGCACAGACCAAAAGAAACCTTGATGGCTCGCACTaGGACTGGGCCACAACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KACLLPAWNLKLAQTKRNLDGSH*DWATTV Trigger: TACTGTTGTGGCCCAGTCTCAGTGCGAGCCATCAAG...GTTTCTTTTGGTCTGTGCAAGCTTCAGGTTCCAAGCAGGCAGTAGGCATGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR GCA 90 bp | ACTGCCCTGGTGAAGAATGATCAAGCCCAGAAGAGGAGGATAGAGTGTAGCTCTTTAGTGCTGATCTTCTaGCCCACGACCAAGGAACGG | + |
|
Preference number: 4 (lower is better) Translates to: TALVKNDQAQKRRIECSSLVLIF*PTTKER Trigger: CCGTTCCTTGGTCGTGGGGCAGAAGATCAGCACTAA...AGAGCTACACTCTATCCTCCTCTTCTGGGCTTGATCATTCTTCACCAGGGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CCA 90 bp | CACGTTAAATGCATCAGTTTGATTCTTCCCAGGCTCTTCTCCGGGATTTCAGGGTTCGCTCTTCTCCTGTaGTGTGGGGTCAATGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HVKCISLILPRLFSGISGFALLL*CGVNGL Trigger: CAGGCCATTGACCCCACACCACAGGAGAAGAGCGAA...CCCTGAAATCCCGGAGAAGAGCCTGGGAAGAATCAAACTGATGCATTTAACGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CCA 90 bp | AGCACTGCCCTGGTGAAGAATGATCAAGCCCAGAAGAGGAGGATAGAGTGTAGCGCCAGTTTGTTCAGGTaGTTGGCCTTGGTGAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: STALVKNDQAQKRRIECSASLFR*LALVKT Trigger: AGTCTTCACCAAGGCCAACCACCTGAACAAACTGGC...GCTACACTCTATCCTCCTCTTCTGGGCTTGATCATTCTTCACCAGGGCAGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CCA 90 bp | AAAGCATGCCTACTGCCTGCTTGGAACCTGAAGCTTGCACAGACCAAAAGAAACAGGACATTGTCCTGTTaGTCCAGCACTGAGGCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KACLLPAWNLKLAQTKRNRTLSC*SSTEAD Trigger: GTCAGCCTCAGTGCTGGACCAACAGGACAATGTCCT...GTTTCTTTTGGTCTGTGCAAGCTTCAGGTTCCAAGCAGGCAGTAGGCATGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CCA 90 bp | CCACTGTGTCGGCACAGGACCTTCCTCACAGCTAAGGGAACAGATGGGGAAATAGTAGAGGATTCGAAGTaGGATGCTGTTCTCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PLCRHRTFLTAKGTDGEIVEDSK*DAVLRV Trigger: TACTCTGAGAACAGCATCCCACTTCGAATCCTCTAC...TATTTCCCCATCTGTTCCCTTAGCTGTGAGGAAGGTCCTGTGCCGACACAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CCA 90 bp | TTGTGGATAGTCCTGGAACTGCATCTGAGGAACCCAGTCATAGGTGAGAAGCAGGGTTCTTCAGGAACTTaGGGTTCATATCCAAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LWIVLELHLRNPVIGEKQGSSGT*GSYPRA Trigger: TGCTCTTGGATATGAACCCCAAGTTCCTGAAGAACC...CTGCTTCTCACCTATGACTGGGTTCCTCAGATGCAGTTCCAGGACTATCCACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| 3UTR CAA 72 bp | CCTCTGTGTAAAGCAGAACACGTTAAATGCATCAGTTaGATTCTTCCCAGGCTCTTCTCCGGGATTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLCKAEHVKCIS*ILPRLFSGISG Trigger: CCCTGAAATCCCGGAGAAGAGCCTGGGAAGAATCAAACTGATGCATTTAACGTGTTCTGCTTTACACAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS TCA 90 bp | TCCCTGCCTCTTCACTGGGATCTGGGCCGGTCACAGCACCGAACGTaGGGCTGTCCACGCTGGCCTCGTAGCCACGGCCCTCGAAGTACA | + |
|
Preference number: 5 (lower is better) Translates to: SLPLHWDLGRSQHRT*GCPRWPRSHGPRST Trigger: TGTACTTCGAGGGCCGTGGCTACGAGGCCAGCGTGGACAGCCTCACGTTCGGTGCTGTGACCGGCCCAGATCCCAGTGAAGAGGCAGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103122.10 ENSMUST00000174718.2 |
||
| CDS TCA 90 bp | CAGGTCGACCCGTGCCTTGACCAAATCGCCCGCTGGCACCGGGTCTaGGACTTCCACAGACTTCTGCTCCTTGGTCAGGCCAGCCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QVDPCLDQIARWHRV*DFHRLLLLGQASPL Trigger: GAGGGGGCTGGCCTGACCAAGGAGCAGAAGTCTGTGGAAGTCTCAGACCCGGTGCCAGCGGGCGATTTGGTCAAGGCACGGGTCGACCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS TCA 90 bp | TGTTGTCCCAGCGGCCCAGAAGCACACCCTGGTCATCATTGCAGTTaGCCATGGCGCTCACCACGCGGCCCACATAGATGGGACTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CCPSGPEAHPGHHCS*PWRSPRGPHRWDCC Trigger: GCAGCAGTCCCATCTATGTGGGCCGCGTGGTGAGCGCCATGGTCAACTGCAATGATGACCAGGGTGTGCTTCTGGGCCGCTGGGACAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS GCA 90 bp | TCTCCGAGGTGTCGTTGCCGATGTGGGCAAACACGTCGAAGTCGTTaGCCATGCTCATACTGTCCCCCACTCGGATGCGCATGGCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: SPRCRCRCGQTRRSR*PCSYCPPLGCAWPP Trigger: GGGTGGCCATGCGCATCCGAGTGGGGGACAGTATGAGCATGGGCAACGACTTCGACGTGTTTGCCCACATCGGCAACGACACCTCGGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS TCA 90 bp | CATGGCGCTCACCACGCGGCCCACATAGATGGGACTGCTGCGGCGTaGGCAGTCCCGACTACGGTTCTTCAGGAACTTGGGGTTCATATC | + |
|
Preference number: 5 (lower is better) Translates to: HGAHHAAHIDGTAAA*AVPTTVLQELGVHI Trigger: GATATGAACCCCAAGTTCCTGAAGAACCGTAGTCGGGACTGCTCACGCCGCAGCAGTCCCATCTATGTGGGCCGCGTGGTGAGCGCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS GCA 90 bp | AGGTGTCGTTGCCGATGTGGGCAAACACGTCGAAGTCGTTGCCCATaGTCATACTGTCCCCCACTCGGATGCGCATGGCCACCCCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RCRCRCGQTRRSRCP*SYCPPLGCAWPPLS Trigger: AGACAGGGGTGGCCATGCGCATCCGAGTGGGGGACAGTATGAGCATGGGCAACGACTTCGACGTGTTTGCCCACATCGGCAACGACACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS GCA 90 bp | ACCAAATCGCCCGCTGGCACCGGGTCTGAGACTTCCACAGACTTCTaGTCCTTGGTCAGGCCAGCCCCCTCCACAGTGAAGATGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TKSPAGTGSETSTDF*SLVRPAPSTVKMQS Trigger: TGACTGCATCTTCACTGTGGAGGGGGCTGGCCTGACCAAGGAGCAGAAGTCTGTGGAAGTCTCAGACCCGGTGCCAGCGGGCGATTTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS CCA 90 bp | ACCAAGATCCCTCCTCCACATTGTCAGACAGTGAGAAGCGGGCCTTaGTCCCTGCCTCTTCACTGGGATCTGGGCCGGTCACAGCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: TKIPPPHCQTVRSGP*SLPLHWDLGRSQHR Trigger: TCGGTGCTGTGACCGGCCCAGATCCCAGTGAAGAGGCAGGGACCAAGGCCCGCTTCTCACTGTCTGACAATGTGGAGGAGGGATCTTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103122.10 ENSMUST00000174718.2 |
||
| CDS CCA 90 bp | CACAACAGTATGTCCCTTCGCTCTTCTCCTGTGGTGTGGGGTCAATaGCCTGCCACCCCTCATAGCCCGGCTGTAGGTCTGGCCTGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HNSMSLRSSPVVWGQ*PATPHSPAVGLAWS Trigger: TGACCAGGCCAGACCTACAGCCGGGCTATGAGGGGTGGCAGGCCATTGACCCCACACCACAGGAGAAGAGCGAAGGGACATACTGTTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS CCA 90 bp | AGACTGGGCCACAACAGTATGTCCCTTCGCTCTTCTCCTGTGGTGTaGGGTCAATGGCCTGCCACCCCTCATAGCCCGGCTGTAGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLGHNSMSLRSSPVV*GQWPATPHSPAVGL Trigger: CAGACCTACAGCCGGGCTATGAGGGGTGGCAGGCCATTGACCCCACACCACAGGAGAAGAGCGAAGGGACATACTGTTGTGGCCCAGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CAA 90 bp | GGCCCTGCAAGTGATGGCCTGCCTACTGTCCCAGTACAGCACAGCAGCCTCAGTTACTCGATGAGCAGGTaGCTGTTCTGGTCGTGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GPASDGLPTVPVQHSSLSYSMSR*LFWSWA Trigger: CGCCCACGACCAGAACAGCAACCTGCTCATCGAGTA...ACTGAGGCTGCTGTGCTGTACTGGGACAGTAGGCAGGCCATCACTTGCAGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CAA 90 bp | GGCCCTGCAAGTGATGGCCTGCCTACTGTCCCAGTACAGCACAGCAGCCTCAGTCAGATCATCTCGCTCTaGTTGCTCTCCAGCTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GPASDGLPTVPVQHSSLSQIISL*LLSSSP Trigger: CGGGGAGCTGGAGAGCAACAAGAGCGAGATGATCTG...ACTGAGGCTGCTGTGCTGTACTGGGACAGTAGGCAGGCCATCACTTGCAGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CAA 90 bp | GGCCCTGCAAGTGATGGCCTGCCTACTGTCCCAGTACAGCACAGCAGCCTCAGTAGTTTGCGGTTTTGCTaGGGTTCTCCCAGGACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GPASDGLPTVPVQHSSLSSLRFC*GSPRTR Trigger: CCGGGTCCTGGGAGAACCCAAGCAAAACCGCAAACT...ACTGAGGCTGCTGTGCTGTACTGGGACAGTAGGCAGGCCATCACTTGCAGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS GCA 90 bp | GTCCCCCACTCGGATGCGCATGGCCACCCCTGTCTCCTCTTTCTCTaGCAGTTTGTTCAGGTGGTTGGCCTTGGTGAAGACTTCCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VPHSDAHGHPCLLFL*QFVQVVGLGEDFPL Trigger: GAGAGGGAAGTCTTCACCAAGGCCAACCACCTGAACAAACTGGCAGAGAAAGAGGAGACAGGGGTGGCCATGCGCATCCGAGTGGGGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS GCA 90 bp | GGGCACAGAGCAGGAGACGACACTCTCGAGTCTCCGAGGTGTCGTTaGCGATGTGGGCAAACACGTCGAAGTCGTTGCCCATGCTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: GHRAGDDTLESPRCR*RCGQTRRSRCPCSY Trigger: GTATGAGCATGGGCAACGACTTCGACGTGTTTGCCCACATCGGCAACGACACCTCGGAGACTCGAGAGTGTCGTCTCCTGCTCTGTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS CCA 90 bp | AGCAGGAGACGACACTCTCGAGTCTCCGAGGTGTCGTTGCCGATGTaGGCAAACACGTCGAAGTCGTTGCCCATGCTCATACTGTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SRRRHSRVSEVSLPM*ANTSKSLPMLILSP Trigger: GGGGGACAGTATGAGCATGGGCAACGACTTCGACGTGTTTGCCCACATCGGCAACGACACCTCGGAGACTCGAGAGTGTCGTCTCCTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CAA 90 bp | CCAGGCTCTTCTCCGGGATTTCAGGGGATCCCAGAGACTCTGACCTCATCACCCAGGCCAATAGGAGCATaGGCTGGGGTGCAGAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PGSSPGFQGIPETLTSSPRPIGA*AGVQSC Trigger: ACAGCTCTGCACCCCAGCCAATGCTCCTATTGGCCT...GGGTGATGAGGTCAGAGTCTCTGGGATCCCCTGAAATCCCGGAGAAGAGCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS CCA 90 bp | CCAGTTTCTCTTGGCATAGGTCGGCCGTGTGGTGGTCACGGCCATTaGCCTGAATCTCCAAATCACACCTCTCCAGGAGCAGCTCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVSLGIGRPCGGHGH*PESPNHTSPGAAPL Trigger: CAGAGGAGCTGCTCCTGGAGAGGTGTGATTTGGAGATTCAGGCCAATGGCCGTGACCACCACACGGCCGACCTATGCCAAGAGAAACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103122.10 ENSMUST00000174718.2 |
||
| CDS-3UTR CAA 90 bp | TGGCTCTCCTCTTACCCTTGCCAGGTACCCACTGTGTCGGCACAGGACCTTCCTTGGTCATCATTGCAGTaGACCATGGCGCTCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: WLSSYPCQVPTVSAQDLPWSSLQ*TMALTT Trigger: CGTGGTGAGCGCCATGGTCAACTGCAATGATGACCA...AGGAAGGTCCTGTGCCGACACAGTGGGTACCTGGCAAGGGTAAGAGGAGAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CAA 90 bp | GGCCCTGCAAGTGATGGCCTGCCTACTGTCCCAGTACAGCACAGCAGCCTCAGTACCTCAGCCACCAGTTaGCGGTTTTGCTTGGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GPASDGLPTVPVQHSSLSTSATS*RFCLGS Trigger: AGAACCCAAGCAAAACCGCAAACTGGTGGCTGAGGT...ACTGAGGCTGCTGTGCTGTACTGGGACAGTAGGCAGGCCATCACTTGCAGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS CCA 90 bp | GCATTGGCTGGGGTGCAGAGCTGTAGCGAGAGGACATTGTCCTGTTaGTCCAGCACTGAGGCTGACCAAGATCCCTCCTCCACATTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ALAGVQSCSERTLSC*SSTEADQDPSSTLS Trigger: TGACAATGTGGAGGAGGGATCTTGGTCAGCCTCAGTGCTGGACCAACAGGACAATGTCCTCTCGCTACAGCTCTGCACCCCAGCCAATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103122.10 ENSMUST00000174718.2 |
||
| CDS-3UTR CAA 90 bp | GGCCCTGCAAGTGATGGCCTGCCTACTGTCCCAGTACAGCACAGCAGCCTCAGTCGGTTCTTCAGGAACTaGGGGTTCATATCCAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GPASDGLPTVPVQHSSLSRFFRN*GFISKS Trigger: GCTCTTGGATATGAACCCCAAGTTCCTGAAGAACCG...ACTGAGGCTGCTGTGCTGTACTGGGACAGTAGGCAGGCCATCACTTGCAGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS TCA 90 bp | GCACAGACCCATCTTCCTGCCGGATCCAGTCCACCACATCAGCGTTaGCCTCGGCAAACACGAAGGGTGCATCATACTTGGTACTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: AQTHLPAGSSPPHQR*PRQTRRVHHTWYSG Trigger: ACCTGAGTACCAAGTATGATGCACCCTTCGTGTTTGCCGAGGTCAACGCTGATGTGGTGGACTGGATCCGGCAGGAAGATGGGTCTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS TCA 90 bp | GTTGGCAGCTGGTTCGATGAGAAGGCCCCGCACCTTGATGAGGTTTaGCTCTGTCAGGCACCCGCTGTACTTCTCGTAGAGGATTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VGSWFDEKAPHLDEV*LCQAPAVLLVEDSK Trigger: CTTCGAATCCTCTACGAGAAGTACAGCGGGTGCCTGACAGAGTCAAACCTCATCAAGGTGCGGGGCCTTCTCATCGAACCAGCTGCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS GCA 90 bp | ACGACCAAGGAACGGTTGATGGATTTGAGCACAGACCCATCTTCCTaGCGGATCCAGTCCACCACATCAGCGTTGACCTCGGCAAACACG | + |
|
Preference number: 5 (lower is better) Translates to: TTKERLMDLSTDPSS*RIQSTTSALTSANT Trigger: CGTGTTTGCCGAGGTCAACGCTGATGTGGTGGACTGGATCCGGCAGGAAGATGGGTCTGTGCTCAAATCCATCAACCGTTCCTTGGTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS GCA 90 bp | ATGTCCTCCCGGTCATCACGGCCCACACTCTTAGTGCTGATCTTCTaGCCCACGACCAAGGAACGGTTGATGGATTTGAGCACAGACCCA | + |
|
Preference number: 5 (lower is better) Translates to: MSSRSSRPTLLVLIF*PTTKERLMDLSTDP Trigger: TGGGTCTGTGCTCAAATCCATCAACCGTTCCTTGGTCGTGGGGCAGAAGATCAGCACTAAGAGTGTGGGCCGTGATGACCGGGAGGACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS CCA 90 bp | TTCACCGACTTCAGCTTGTCACACTGGAAGTTCACCACCAGCTTGTaGAGGCCAATATCAGTCGGGAACAGGTCGACCCGTGCCTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: FTDFSLSHWKFTTSL*RPISVGNRSTRALT Trigger: GGTCAAGGCACGGGTCGACCTGTTCCCGACTGATATTGGCCTCCACAAGCTGGTGGTGAACTTCCAGTGTGACAAGCTGAAGTCGGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CAA 90 bp | TACAGAGTGCTGGTGATGGCTCTCCTCTTACCCTTGCCAGGTACCCACTGTGTCGATCCCTCCTCCACATaGTCAGACAGTGAGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: YRVLVMALLLPLPGTHCVDPSST*SDSEKR Trigger: CCGCTTCTCACTGTCTGACAATGTGGAGGAGGGATC...GACACAGTGGGTACCTGGCAAGGGTAAGAGGAGAGCCATCACCAGCACTCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CAA 90 bp | GCTCTCCTCTTACCCTTGCCAGGTACCCACTGTGTCGGCACAGGACCTTCCTCAGTAGATGAAGCCCTGTaGCGTAAGGACATATTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ALLLPLPGTHCVGTGPSSVDEAL*RKDIFP Trigger: CGGGAATATGTCCTTACGCAACAGGGCTTCATCTAC...TGAGGAAGGTCCTGTGCCGACACAGTGGGTACCTGGCAAGGGTAAGAGGAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CAA 90 bp | GCTCTCCTCTTACCCTTGCCAGGTACCCACTGTGTCGGCACAGGACCTTCCTCAGAACGGTTGATGGATTaGAGCACAGACCCATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALLLPLPGTHCVGTGPSSERLMD*STDPSS Trigger: GGAAGATGGGTCTGTGCTCAAATCCATCAACCGTTC...TGAGGAAGGTCCTGTGCCGACACAGTGGGTACCTGGCAAGGGTAAGAGGAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CAA 90 bp | TGGCTCTCCTCTTACCCTTGCCAGGTACCCACTGTGTCGGCACAGGACCTTCCTAGTTTGTTCAGGTGGTaGGCCTTGGTGAAGACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: WLSSYPCQVPTVSAQDLPSLFRW*ALVKTS Trigger: GGAAGTCTTCACCAAGGCCAACCACCTGAACAAACT...AGGAAGGTCCTGTGCCGACACAGTGGGTACCTGGCAAGGGTAAGAGGAGAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS TCA 90 bp | TGCATCATACTTGGTACTCAGGTCTCCCTCCTTGATGGCTCGCACTaGGACTGGGCCACAACAGTATGTCCCTTCGCTCTTCTCCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CIILGTQVSLLDGSH*DWATTVCPFALLLW Trigger: CCACAGGAGAAGAGCGAAGGGACATACTGTTGTGGCCCAGTCTCAGTGCGAGCCATCAAGGAGGGAGACCTGAGTACCAAGTATGATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS TCA 90 bp | CCACCAGTTTGCGGTTTTGCTTGGGTTCTCCCAGGACCCGGATCTTaGTTTCGGGATTCTCCAGGTAGAGATCTCTCTCAGCCAGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PPVCGFAWVLPGPGS*FRDSPGRDLSQPAG Trigger: ACCTGCTGGCTGAGAGAGATCTCTACCTGGAGAATCCCGAAATCAAGATCCGGGTCCTGGGAGAACCCAAGCAAAACCGCAAACTGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS CCA 90 bp | GACTGCTGCGGCGTGAGCAGTCCCGACTACGGTTCTTCAGGAACTTaGGGTTCATATCCAAGAGCATCAGGCAGGTATCCAGGATTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: DCCGVSSPDYGSSGT*GSYPRASGRYPGFH Trigger: ATGGAATCCTGGATACCTGCCTGATGCTCTTGGATATGAACCCCAAGTTCCTGAAGAACCGTAGTCGGGACTGCTCACGCCGCAGCAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CAA 90 bp | AGCACTGCCCTGGTGAAGAATGATCAAGCCCAGAAGAGGAGGATAGAGTGTAGCCCCAGGACCCGGATCTaGATTTCGGGATTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: STALVKNDQAQKRRIECSPRTRI*ISGFSR Trigger: CCTGGAGAATCCCGAAATCAAGATCCGGGTCCTGGG...GCTACACTCTATCCTCCTCTTCTGGGCTTGATCATTCTTCACCAGGGCAGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CAA 90 bp | TCCAGATCATCTCGCTCTTGTTGCTCTCCAGCTCCCCGAACTCATTTCGGAAGTGATCCCTCCTCCACATaGTCAGACAGTGAGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SRSSRSCCSPAPRTHFGSDPSST*SDSEKR Trigger: CCGCTTCTCACTGTCTGACAATGTGGAGGAGGGATC...ACTTCCGAAATGAGTTCGGGGAGCTGGAGAGCAACAAGAGCGAGATGATCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174718.2 |
||
| CDS-3UTR CAA 90 bp | GGCTGGTGTCCCTGTGAGAACTTAAGGTGCCTAGCACATATGGTTCCCATTCAGTCCACCACATCAGCGTaGACCTCGGCAAACACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GWCPCENLRCLAHMVPIQSTTSA*TSANTK Trigger: CTTCGTGTTTGCCGAGGTCAACGCTGATGTGGTGGA...CTGAATGGGAACCATATGTGCTAGGCACCTTAAGTTCTCACAGGGACACCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CAA 90 bp | TACAGAGTGCTGGTGATGGCTCTCCTCTTACCCTTGCCAGGTACCCACTGTGTCTCTTTCTCTGCCAGTTaGTTCAGGTGGTTGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: YRVLVMALLLPLPGTHCVSFSAS*FRWLAL Trigger: CAAGGCCAACCACCTGAACAAACTGGCAGAGAAAGA...GACACAGTGGGTACCTGGCAAGGGTAAGAGGAGAGCCATCACCAGCACTCTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CAA 90 bp | TTGTGGATAGTCCTGGAACTGCATCTGAGGAACCCAGTCATAGGTGAGAAGCAGGGATCCAGGGTCAGGTaGATGTCCTCAGTGCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: LWIVLELHLRNPVIGEKQGSRVR*MSSVPH Trigger: GTGTGGCACTGAGGACATCAACCTGACCCTGGATCC...CTGCTTCTCACCTATGACTGGGTTCCTCAGATGCAGTTCCAGGACTATCCACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CAA 90 bp | TACAGAGTGCTGGTGATGGCTCTCCTCTTACCCTTGCCAGGTACCCACTGTGTCAAGTTCACCACCAGCTaGTGGAGGCCAATATCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: YRVLVMALLLPLPGTHCVKFTTS*WRPISV Trigger: GACTGATATTGGCCTCCACAAGCTGGTGGTGAACTT...GACACAGTGGGTACCTGGCAAGGGTAAGAGGAGAGCCATCACCAGCACTCTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CAA 90 bp | AGTATAGGGCCAGGAGACCCCTGGTTAAGCACTGCCCTGGTGAAGAATGATCAATGTAGCGAGAGGACATaGTCCTGTTGGTCCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: SIGPGDPWLSTALVKNDQCSERT*SCWSST Trigger: AGTGCTGGACCAACAGGACAATGTCCTCTCGCTACA...TTGATCATTCTTCACCAGGGCAGTGCTTAACCAGGGGTCTCCTGGCCCTATACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CAA 90 bp | AGTGGAAGTTCCAGATCATCTCGCTCTTGTTGCTCTCCAGCTCCCCGAACTCATTGTAGCGAGAGGACATaGTCCTGTTGGTCCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: SGSSRSSRSCCSPAPRTHCSERT*SCWSST Trigger: AGTGCTGGACCAACAGGACAATGTCCTCTCGCTACA...ATGAGTTCGGGGAGCTGGAGAGCAACAAGAGCGAGATGATCTGGAACTTCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174718.2 |
||
| CDS-3UTR CAA 90 bp | TTGTGGATAGTCCTGGAACTGCATCTGAGGAACCCAGTCATAGGTGAGAAGCAGACACCCTGGTCATCATaGCAGTTGACCATGGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LWIVLELHLRNPVIGEKQTPWSS*QLTMAL Trigger: GAGCGCCATGGTCAACTGCAATGATGACCAGGGTGT...CTGCTTCTCACCTATGACTGGGTTCCTCAGATGCAGTTCCAGGACTATCCACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CAA 90 bp | AGCACTGCCCTGGTGAAGAATGATCAAGCCCAGAAGAGGAGGATAGAGTGTAGCGAACTTGACAGAGCCTaGGTAGATGAAGCCCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: STALVKNDQAQKRRIECSELDRA*VDEALL Trigger: CAACAGGGCTTCATCTACCAAGGCTCTGTCAAGTTC...GCTACACTCTATCCTCCTCTTCTGGGCTTGATCATTCTTCACCAGGGCAGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CAA 90 bp | AAAGCATGCCTACTGCCTGCTTGGAACCTGAAGCTTGCACAGACCAAAAGAAACCTGCCCGTACTTCACTaGCTGACAGCCGTGTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: KACLLPAWNLKLAQTKRNLPVLH*LTAVFL Trigger: AAGGAACACGGCTGTCAGCAAGTGAAGTACGGGCAG...GTTTCTTTTGGTCTGTGCAAGCTTCAGGTTCCAAGCAGGCAGTAGGCATGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS-3UTR CAA 90 bp | AAAGCATGCCTACTGCCTGCTTGGAACCTGAAGCTTGCACAGACCAAAAGAAACTTCAGGTGGTTGGCCTaGGTGAAGACTTCCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KACLLPAWNLKLAQTKRNFRWLA*VKTSLS Trigger: GGAGAGGGAAGTCTTCACCAAGGCCAACCACCTGAA...GTTTCTTTTGGTCTGTGCAAGCTTCAGGTTCCAAGCAGGCAGTAGGCATGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS GCA 90 bp | ATATCCAAGAGCATCAGGCAGGTATCCAGGATTCCATCCTCGAACTaGCCAAAGTTCCAAGGCACACTCTTGATGAACTTGACAGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ISKSIRQVSRIPSSN*PKFQGTLLMNLTEP Trigger: AGGCTCTGTCAAGTTCATCAAGAGTGTGCCTTGGAACTTTGGGCAGTTCGAGGATGGAATCCTGGATACCTGCCTGATGCTCTTGGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS TCA 72 bp | CTTCACTGGGATCTGGGCCGGTCACAGCACCGAACGTaGGGCTGTCCACGCTGGCCTCGTAGCCACGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LHWDLGRSQHRT*GCPRWPRSHGP Trigger: AGGGCCGTGGCTACGAGGCCAGCGTGGACAGCCTCACGTTCGGTGCTGTGACCGGCCCAGATCCCAGTGAAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103122.10 ENSMUST00000174718.2 |
||
| CDS CCA 72 bp | GAAGCGGGCCTTGGTCCCTGCCTCTTCACTGGGATCTaGGCCGGTCACAGCACCGAACGTGAGGCTGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: EAGLGPCLFTGI*AGHSTEREAVH Trigger: GTGGACAGCCTCACGTTCGGTGCTGTGACCGGCCCAGATCCCAGTGAAGAGGCAGGGACCAAGGCCCGCTTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103122.10 ENSMUST00000174718.2 |
||
| CDS GCA 72 bp | TGGCGCTCACCACGCGGCCCACATAGATGGGACTGCTaGGGCGTGAGCAGTCCCGACTACGGTTCTTCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: WRSPRGPHRWDC*GVSSPDYGSSG Trigger: TCCTGAAGAACCGTAGTCGGGACTGCTCACGCCGCAGCAGTCCCATCTATGTGGGCCGCGTGGTGAGCGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS TCA 72 bp | CACCACGCGGCCCACATAGATGGGACTGCTGCGGCGTaGGCAGTCCCGACTACGGTTCTTCAGGAACTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: HHAAHIDGTAAA*AVPTTVLQELG Trigger: CCCAAGTTCCTGAAGAACCGTAGTCGGGACTGCTCACGCCGCAGCAGTCCCATCTATGTGGGCCGCGTGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS CAA 72 bp | CCCTCCTCCACATTGTCAGACAGTGAGAAGCGGGCCTaGGTCCCTGCCTCTTCACTGGGATCTGGGCCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PSSTLSDSEKRA*VPASSLGSGPV Trigger: GACCGGCCCAGATCCCAGTGAAGAGGCAGGGACCAAGGCCCGCTTCTCACTGTCTGACAATGTGGAGGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103122.10 ENSMUST00000174718.2 |
||
| CDS CAA 90 bp | GACCAAGATCCCTCCTCCACATTGTCAGACAGTGAGAAGCGGGCCTaGGTCCCTGCCTCTTCACTGGGATCTGGGCCGGTCACAGCACCG | + |
|
Preference number: 6 (lower is better) Translates to: DQDPSSTLSDSEKRA*VPASSLGSGPVTAP Trigger: CGGTGCTGTGACCGGCCCAGATCCCAGTGAAGAGGCAGGGACCAAGGCCCGCTTCTCACTGTCTGACAATGTGGAGGAGGGATCTTGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103122.10 ENSMUST00000174718.2 |
||
| CDS CAA 90 bp | GTCTCCGAGGTGTCGTTGCCGATGTGGGCAAACACGTCGAAGTCGTaGCCCATGCTCATACTGTCCCCCACTCGGATGCGCATGGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: VSEVSLPMWANTSKS*PMLILSPTRMRMAT Trigger: GGTGGCCATGCGCATCCGAGTGGGGGACAGTATGAGCATGGGCAACGACTTCGACGTGTTTGCCCACATCGGCAACGACACCTCGGAGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS CCA 72 bp | CCTCCTCCACATTGTCAGACAGTGAGAAGCGGGCCTTaGTCCCTGCCTCTTCACTGGGATCTGGGCCGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PPPHCQTVRSGP*SLPLHWDLGRS Trigger: TGACCGGCCCAGATCCCAGTGAAGAGGCAGGGACCAAGGCCCGCTTCTCACTGTCTGACAATGTGGAGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103122.10 ENSMUST00000174718.2 |
||
| CDS TCA 72 bp | CATAGGTCGGCCGTGTGGTGGTCACGGCCATTGGCCTaGATCTCCAAATCACACCTCTCCAGGAGCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: HRSAVWWSRPLA*ISKSHLSRSSS Trigger: GGAGCTGCTCCTGGAGAGGTGTGATTTGGAGATTCAGGCCAATGGCCGTGACCACCACACGGCCGACCTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103122.10 ENSMUST00000174718.2 |
||
| CDS GCA 72 bp | AGTCGTTGCCCATGCTCATACTGTCCCCCACTCGGATaGGCATGGCCACCCCTGTCTCCTCTTTCTCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SRCPCSYCPPLG*AWPPLSPLSLP Trigger: TGGCAGAGAAAGAGGAGACAGGGGTGGCCATGCGCATCCGAGTGGGGGACAGTATGAGCATGGGCAACGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS GCA 72 bp | TGCCGATGTGGGCAAACACGTCGAAGTCGTTGCCCATaGTCATACTGTCCCCCACTCGGATGCGCATGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: CRCGQTRRSRCP*SYCPPLGCAWP Trigger: TGGCCATGCGCATCCGAGTGGGGGACAGTATGAGCATGGGCAACGACTTCGACGTGTTTGCCCACATCGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS GCA 72 bp | GCAGGAGACGACACTCTCGAGTCTCCGAGGTGTCGTTaGCGATGTGGGCAAACACGTCGAAGTCGTTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: AGDDTLESPRCR*RCGQTRRSRCP Trigger: TGGGCAACGACTTCGACGTGTTTGCCCACATCGGCAACGACACCTCGGAGACTCGAGAGTGTCGTCTCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
||
| CDS CCA 72 bp | GGGGTGCAGAGCTGTAGCGAGAGGACATTGTCCTGTTaGTCCAGCACTGAGGCTGACCAAGATCCCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GVQSCSERTLSC*SSTEADQDPSS Trigger: GGAGGAGGGATCTTGGTCAGCCTCAGTGCTGGACCAACAGGACAATGTCCTCTCGCTACAGCTCTGCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103122.10 ENSMUST00000174718.2 |
||
| CDS CCA 72 bp | CACAACAGTATGTCCCTTCGCTCTTCTCCTGTGGTGTaGGGTCAATGGCCTGCCACCCCTCATAGCCCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: HNSMSLRSSPVV*GQWPATPHSPA Trigger: AGCCGGGCTATGAGGGGTGGCAGGCCATTGACCCCACACCACAGGAGAAGAGCGAAGGGACATACTGTTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CCA 72 bp | TGGGCCACAACAGTATGTCCCTTCGCTCTTCTCCTGTaGTGTGGGGTCAATGGCCTGCCACCCCTCATAGCC | + |
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Preference number: 6 (lower is better) Translates to: WATTVCPFALLL*CGVNGLPPLIA Trigger: GGCTATGAGGGGTGGCAGGCCATTGACCCCACACCACAGGAGAAGAGCGAAGGGACATACTGTTGTGGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CAA 72 bp | TCCAGCACTGAGGCTGACCAAGATCCCTCCTCCACATaGTCAGACAGTGAGAAGCGGGCCTTGGTCCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SSTEADQDPSST*SDSEKRALVPA Trigger: GGCAGGGACCAAGGCCCGCTTCTCACTGTCTGACAATGTGGAGGAGGGATCTTGGTCAGCCTCAGTGCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103122.10 ENSMUST00000174718.2 |
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| CDS CAA 72 bp | GTGTCGTTGCCGATGTGGGCAAACACGTCGAAGTCGTaGCCCATGCTCATACTGTCCCCCACTCGGATGCGC | + |
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Preference number: 6 (lower is better) Translates to: VSLPMWANTSKS*PMLILSPTRMR Trigger: GCGCATCCGAGTGGGGGACAGTATGAGCATGGGCAACGACTTCGACGTGTTTGCCCACATCGGCAACGACAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CAA 72 bp | AGCAGGAGACGACACTCTCGAGTCTCCGAGGTGTCGTaGCCGATGTGGGCAAACACGTCGAAGTCGTTGCCC | + |
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Preference number: 6 (lower is better) Translates to: SRRRHSRVSEVS*PMWANTSKSLP Trigger: GGGCAACGACTTCGACGTGTTTGCCCACATCGGCAACGACACCTCGGAGACTCGAGAGTGTCGTCTCCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CAA 90 bp | CGGGCACAGAGCAGGAGACGACACTCTCGAGTCTCCGAGGTGTCGTaGCCGATGTGGGCAAACACGTCGAAGTCGTTGCCCATGCTCATA | + |
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Preference number: 6 (lower is better) Translates to: RAQSRRRHSRVSEVS*PMWANTSKSLPMLI Trigger: TATGAGCATGGGCAACGACTTCGACGTGTTTGCCCACATCGGCAACGACACCTCGGAGACTCGAGAGTGTCGTCTCCTGCTCTGTGCCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CAA 90 bp | TCCTGTTGGTCCAGCACTGAGGCTGACCAAGATCCCTCCTCCACATaGTCAGACAGTGAGAAGCGGGCCTTGGTCCCTGCCTCTTCACTG | + |
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Preference number: 6 (lower is better) Translates to: SCWSSTEADQDPSST*SDSEKRALVPASSL Trigger: CAGTGAAGAGGCAGGGACCAAGGCCCGCTTCTCACTGTCTGACAATGTGGAGGAGGGATCTTGGTCAGCCTCAGTGCTGGACCAACAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103122.10 ENSMUST00000174718.2 |
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| CDS CAA 90 bp | CCAATAGGAGCATTGGCTGGGGTGCAGAGCTGTAGCGAGAGGACATaGTCCTGTTGGTCCAGCACTGAGGCTGACCAAGATCCCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: PIGALAGVQSCSERT*SCWSSTEADQDPSS Trigger: GGAGGAGGGATCTTGGTCAGCCTCAGTGCTGGACCAACAGGACAATGTCCTCTCGCTACAGCTCTGCACCCCAGCCAATGCTCCTATTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103122.10 ENSMUST00000174718.2 |
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| CDS GCA 72 bp | TGTCGTTGCCGATGTGGGCAAACACGTCGAAGTCGTTaGCCATGCTCATACTGTCCCCCACTCGGATGCGCA | + |
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Preference number: 6 (lower is better) Translates to: CRCRCGQTRRSR*PCSYCPPLGCA Trigger: TGCGCATCCGAGTGGGGGACAGTATGAGCATGGGCAACGACTTCGACGTGTTTGCCCACATCGGCAACGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CAA 72 bp | GCCTCTAGGCTGAGACGGTACAGGCCAATAGGAGCATaGGCTGGGGTGCAGAGCTGTAGCGAGAGGACATTG | + |
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Preference number: 6 (lower is better) Translates to: ASRLRRYRPIGA*AGVQSCSERTL Trigger: CAATGTCCTCTCGCTACAGCTCTGCACCCCAGCCAATGCTCCTATTGGCCTGTACCGTCTCAGCCTAGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103122.10 ENSMUST00000174718.2 |
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| CDS CAA 90 bp | CCAGTAGAAGCCTCTAGGCTGAGACGGTACAGGCCAATAGGAGCATaGGCTGGGGTGCAGAGCTGTAGCGAGAGGACATTGTCCTGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: PVEASRLRRYRPIGA*AGVQSCSERTLSCW Trigger: CCAACAGGACAATGTCCTCTCGCTACAGCTCTGCACCCCAGCCAATGCTCCTATTGGCCTGTACCGTCTCAGCCTAGAGGCTTCTACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103122.10 ENSMUST00000174718.2 |
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| CDS CAA 90 bp | CCCTTCACCGACTTCAGCTTGTCACACTGGAAGTTCACCACCAGCTaGTGGAGGCCAATATCAGTCGGGAACAGGTCGACCCGTGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PFTDFSLSHWKFTTS*WRPISVGNRSTRAL Trigger: CAAGGCACGGGTCGACCTGTTCCCGACTGATATTGGCCTCCACAAGCTGGTGGTGAACTTCCAGTGTGACAAGCTGAAGTCGGTGAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS TCA 72 bp | CTTTCTCTGCCAGTTTGTTCAGGTGGTTGGCCTTGGTaGAGACTTCCCTCTCCTCGGGTGACCCCTCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LSLPVCSGGWPW*RLPSPRVTPLG Trigger: ACCCAGAGGGGTCACCCGAGGAGAGGGAAGTCTTCACCAAGGCCAACCACCTGAACAAACTGGCAGAGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CCA 72 bp | CGACACTCTCGAGTCTCCGAGGTGTCGTTGCCGATGTaGGCAAACACGTCGAAGTCGTTGCCCATGCTCATA | + |
|
Preference number: 6 (lower is better) Translates to: RHSRVSEVSLPM*ANTSKSLPMLI Trigger: TATGAGCATGGGCAACGACTTCGACGTGTTTGCCCACATCGGCAACGACACCTCGGAGACTCGAGAGTGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CCA 72 bp | GAGATCTCTCTCAGCCAGCAGGTAGCTGTTGGCAGCTaGTTCGATGAGAAGGCCCCGCACCTTGATGAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: EISLSQQVAVGS*FDEKAPHLDEV Trigger: AACCTCATCAAGGTGCGGGGCCTTCTCATCGAACCAGCTGCCAACAGCTACCTGCTGGCTGAGAGAGATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CAA 72 bp | GAAAGTGGGTTCTTCAGGGACACCTCAGCCACCAGTTaGCGGTTTTGCTTGGGTTCTCCCAGGACCCGGATC | + |
|
Preference number: 6 (lower is better) Translates to: ESGFFRDTSATS*RFCLGSPRTRI Trigger: GATCCGGGTCCTGGGAGAACCCAAGCAAAACCGCAAACTGGTGGCTGAGGTGTCCCTGAAGAACCCACTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CAA 90 bp | GGACTGCTGCGGCGTGAGCAGTCCCGACTACGGTTCTTCAGGAACTaGGGGTTCATATCCAAGAGCATCAGGCAGGTATCCAGGATTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GLLRREQSRLRFFRN*GFISKSIRQVSRIP Trigger: TGGAATCCTGGATACCTGCCTGATGCTCTTGGATATGAACCCCAAGTTCCTGAAGAACCGTAGTCGGGACTGCTCACGCCGCAGCAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CAA 90 bp | CCCACACTCTTAGTGCTGATCTTCTGCCCCACGACCAAGGAACGGTaGATGGATTTGAGCACAGACCCATCTTCCTGCCGGATCCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PTLLVLIFCPTTKER*MDLSTDPSSCRIQS Trigger: GGACTGGATCCGGCAGGAAGATGGGTCTGTGCTCAAATCCATCAACCGTTCCTTGGTCGTGGGGCAGAAGATCAGCACTAAGAGTGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CAA 90 bp | AGGGGATCGGAAAGTGGGTTCTTCAGGGACACCTCAGCCACCAGTTaGCGGTTTTGCTTGGGTTCTCCCAGGACCCGGATCTTGATTTCG | + |
|
Preference number: 6 (lower is better) Translates to: RGSESGFFRDTSATS*RFCLGSPRTRILIS Trigger: CGAAATCAAGATCCGGGTCCTGGGAGAACCCAAGCAAAACCGCAAACTGGTGGCTGAGGTGTCCCTGAAGAACCCACTTTCCGATCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS TCA 72 bp | CTTGGTACTCAGGTCTCCCTCCTTGATGGCTCGCACTaGGACTGGGCCACAACAGTATGTCCCTTCGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LGTQVSLLDGSH*DWATTVCPFAL Trigger: AAGAGCGAAGGGACATACTGTTGTGGCCCAGTCTCAGTGCGAGCCATCAAGGAGGGAGACCTGAGTACCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS TCA 72 bp | CATCTTCCTGCCGGATCCAGTCCACCACATCAGCGTTaGCCTCGGCAAACACGAAGGGTGCATCATACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: HLPAGSSPPHQR*PRQTRRVHHTW Trigger: CCAAGTATGATGCACCCTTCGTGTTTGCCGAGGTCAACGCTGATGTGGTGGACTGGATCCGGCAGGAAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS TCA 72 bp | TGGTTCGATGAGAAGGCCCCGCACCTTGATGAGGTTTaGCTCTGTCAGGCACCCGCTGTACTTCTCGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: WFDEKAPHLDEV*LCQAPAVLLVE Trigger: CTCTACGAGAAGTACAGCGGGTGCCTGACAGAGTCAAACCTCATCAAGGTGCGGGGCCTTCTCATCGAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS GCA 72 bp | GAACGGTTGATGGATTTGAGCACAGACCCATCTTCCTaGCGGATCCAGTCCACCACATCAGCGTTGACCTCG | + |
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Preference number: 6 (lower is better) Translates to: ERLMDLSTDPSS*RIQSTTSALTS Trigger: CGAGGTCAACGCTGATGTGGTGGACTGGATCCGGCAGGAAGATGGGTCTGTGCTCAAATCCATCAACCGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS GCA 72 bp | CGGTCATCACGGCCCACACTCTTAGTGCTGATCTTCTaGCCCACGACCAAGGAACGGTTGATGGATTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: RSSRPTLLVLIF*PTTKERLMDLS Trigger: GCTCAAATCCATCAACCGTTCCTTGGTCGTGGGGCAGAAGATCAGCACTAAGAGTGTGGGCCGTGATGACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CCA 72 bp | CAGGCACCCGCTGTACTTCTCGTAGAGGATTCGAAGTaGGATGCTGTTCTCAGAGTAGGGATCCAGGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: QAPAVLLVEDSK*DAVLRVGIQGQ Trigger: CTGACCCTGGATCCCTACTCTGAGAACAGCATCCCACTTCGAATCCTCTACGAGAAGTACAGCGGGTGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CAA 72 bp | CGGCGTGAGCAGTCCCGACTACGGTTCTTCAGGAACTaGGGGTTCATATCCAAGAGCATCAGGCAGGTATCC | + |
|
Preference number: 6 (lower is better) Translates to: RREQSRLRFFRN*GFISKSIRQVS Trigger: GGATACCTGCCTGATGCTCTTGGATATGAACCCCAAGTTCCTGAAGAACCGTAGTCGGGACTGCTCACGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CAA 72 bp | CCATCTTCCTGCCGGATCCAGTCCACCACATCAGCGTaGACCTCGGCAAACACGAAGGGTGCATCATACTTG | + |
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Preference number: 6 (lower is better) Translates to: PSSCRIQSTTSA*TSANTKGASYL Trigger: CAAGTATGATGCACCCTTCGTGTTTGCCGAGGTCAACGCTGATGTGGTGGACTGGATCCGGCAGGAAGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CAA 72 bp | ATCTTCTGCCCCACGACCAAGGAACGGTTGATGGATTaGAGCACAGACCCATCTTCCTGCCGGATCCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: IFCPTTKERLMD*STDPSSCRIQS Trigger: GGACTGGATCCGGCAGGAAGATGGGTCTGTGCTCAAATCCATCAACCGTTCCTTGGTCGTGGGGCAGAAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CAA 72 bp | TCCTCTTTCTCTGCCAGTTTGTTCAGGTGGTTGGCCTaGGTGAAGACTTCCCTCTCCTCGGGTGACCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: SSFSASLFRWLA*VKTSLSSGDPS Trigger: AGAGGGGTCACCCGAGGAGAGGGAAGTCTTCACCAAGGCCAACCACCTGAACAAACTGGCAGAGAAAGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CAA 72 bp | TTCAGGGACACCTCAGCCACCAGTTTGCGGTTTTGCTaGGGTTCTCCCAGGACCCGGATCTTGATTTCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: FRDTSATSLRFC*GSPRTRILISG Trigger: TCCCGAAATCAAGATCCGGGTCCTGGGAGAACCCAAGCAAAACCGCAAACTGGTGGCTGAGGTGTCCCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CAA 90 bp | GCAAACACGAAGGGTGCATCATACTTGGTACTCAGGTCTCCCTCCTaGATGGCTCGCACTGAGACTGGGCCACAACAGTATGTCCCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: ANTKGASYLVLRSPS*MARTETGPQQYVPS Trigger: CGAAGGGACATACTGTTGTGGCCCAGTCTCAGTGCGAGCCATCAAGGAGGGAGACCTGAGTACCAAGTATGATGCACCCTTCGTGTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CCA 72 bp | GGCGTGAGCAGTCCCGACTACGGTTCTTCAGGAACTTaGGGTTCATATCCAAGAGCATCAGGCAGGTATCCA | + |
|
Preference number: 6 (lower is better) Translates to: GVSSPDYGSSGT*GSYPRASGRYP Trigger: TGGATACCTGCCTGATGCTCTTGGATATGAACCCCAAGTTCCTGAAGAACCGTAGTCGGGACTGCTCACGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CCA 72 bp | CACAGTGAAGATGCAGTCATACAGGGGATCGGAAAGTaGGTTCTTCAGGGACACCTCAGCCACCAGTTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: HSEDAVIQGIGK*VLQGHLSHQFA Trigger: CGCAAACTGGTGGCTGAGGTGTCCCTGAAGAACCCACTTTCCGATCCCCTGTATGACTGCATCTTCACTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CCA 72 bp | TTCAGCTTGTCACACTGGAAGTTCACCACCAGCTTGTaGAGGCCAATATCAGTCGGGAACAGGTCGACCCGT | + |
|
Preference number: 6 (lower is better) Translates to: FSLSHWKFTTSL*RPISVGNRSTR Trigger: ACGGGTCGACCTGTTCCCGACTGATATTGGCCTCCACAAGCTGGTGGTGAACTTCCAGTGTGACAAGCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CAA 72 bp | GTTCTTCAGGGACACCTCAGCCACCAGTTTGCGGTTTaGCTTGGGTTCTCCCAGGACCCGGATCTTGATTTC | + |
|
Preference number: 6 (lower is better) Translates to: VLQGHLSHQFAV*LGFSQDPDLDF Trigger: GAAATCAAGATCCGGGTCCTGGGAGAACCCAAGCAAAACCGCAAACTGGTGGCTGAGGTGTCCCTGAAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CAA 72 bp | GACTTCAGCTTGTCACACTGGAAGTTCACCACCAGCTaGTGGAGGCCAATATCAGTCGGGAACAGGTCGACC | + |
|
Preference number: 6 (lower is better) Translates to: DFSLSHWKFTTS*WRPISVGNRST Trigger: GGTCGACCTGTTCCCGACTGATATTGGCCTCCACAAGCTGGTGGTGAACTTCCAGTGTGACAAGCTGAAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CAA 90 bp | TTAGTGCTGATCTTCTGCCCCACGACCAAGGAACGGTTGATGGATTaGAGCACAGACCCATCTTCCTGCCGGATCCAGTCCACCACATCA | + |
|
Preference number: 6 (lower is better) Translates to: LVLIFCPTTKERLMD*STDPSSCRIQSTTS Trigger: TGATGTGGTGGACTGGATCCGGCAGGAAGATGGGTCTGTGCTCAAATCCATCAACCGTTCCTTGGTCGTGGGGCAGAAGATCAGCACTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS TCA 72 bp | TGCGGTTTTGCTTGGGTTCTCCCAGGACCCGGATCTTaGTTTCGGGATTCTCCAGGTAGAGATCTCTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: CGFAWVLPGPGS*FRDSPGRDLSQ Trigger: CTGAGAGAGATCTCTACCTGGAGAATCCCGAAATCAAGATCCGGGTCCTGGGAGAACCCAAGCAAAACCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CAA 72 bp | AAGGGTGCATCATACTTGGTACTCAGGTCTCCCTCCTaGATGGCTCGCACTGAGACTGGGCCACAACAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: KGASYLVLRSPS*MARTETGPQQY Trigger: ATACTGTTGTGGCCCAGTCTCAGTGCGAGCCATCAAGGAGGGAGACCTGAGTACCAAGTATGATGCACCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CAA 90 bp | CTGCCCAAAGTTCCAAGGCACACTCTTGATGAACTTGACAGAGCCTaGGTAGATGAAGCCCTGTTGCGTAAGGACATATTCCCGTCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LPKVPRHTLDELDRA*VDEALLRKDIFPSL Trigger: GAGCGACGGGAATATGTCCTTACGCAACAGGGCTTCATCTACCAAGGCTCTGTCAAGTTCATCAAGAGTGTGCCTTGGAACTTTGGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS GCA 72 bp | AGCATCAGGCAGGTATCCAGGATTCCATCCTCGAACTaGCCAAAGTTCCAAGGCACACTCTTGATGAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: SIRQVSRIPSSN*PKFQGTLLMNL Trigger: CAAGTTCATCAAGAGTGTGCCTTGGAACTTTGGGCAGTTCGAGGATGGAATCCTGGATACCTGCCTGATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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| CDS CAA 72 bp | GTTCCAAGGCACACTCTTGATGAACTTGACAGAGCCTaGGTAGATGAAGCCCTGTTGCGTAAGGACATATTC | + |
|
Preference number: 6 (lower is better) Translates to: VPRHTLDELDRA*VDEALLRKDIF Trigger: GAATATGTCCTTACGCAACAGGGCTTCATCTACCAAGGCTCTGTCAAGTTCATCAAGAGTGTGCCTTGGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103122.10 |
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