Pregenerated sensors for TGM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022218Ensembl transcript IDs: ENSMUST00000002389.9, ENSMUST00000168729.8, ENSMUST00000178034.9, ENSMUST00000226907.2, ENSMUST00000227958.2, ENSMUST00000228123.2
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GTCAGCACCACAGAGACAGCCAGATCCTGCCCCATCACAGCGTCCTaGGCCTCCACCTGCATTGCCACATCCTCAGCGGAGTCCCGGGTG | + |
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Preference number: 5 (lower is better) Translates to: VSTTETARSCPITAS*ASTCIATSSAESRV Trigger: CACCCGGGACTCCGCTGAGGATGTGGCAATGCAGGTGGAGGCGCAGGACGCTGTGATGGGGCAGGATCTGGCTGTCTCTGTGGTGCTGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS GCA 90 bp | GCATTCCCTCTCGGATGGTGCCATCTCCAGCTGCATTTACACCACTaGCCCGAGACTCGGGTCTTCGGCCACCCCGAGAGTCCCTACCCC | + |
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Preference number: 5 (lower is better) Translates to: AFPLGWCHLQLHLHH*PETRVFGHPESPYP Trigger: GGGGTAGGGACTCTCGGGGTGGCCGAAGACCCGAGTCTCGGGGCAGTGGTGTAAATGCAGCTGGAGATGGCACCATCCGAGAGGGAATGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 ENSMUST00000226907.2 ENSMUST00000227958.2 ENSMUST00000228123.2 |
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| CDS CCA 90 bp | TCCTCAGCGGAGTCCCGGGTGGCATACACATTAGGTTTGCTGCCATaGGCTGCCGCCTTCTCCACAGCCCTCCGCTCTGCTTCTGAGCCT | + |
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Preference number: 5 (lower is better) Translates to: SSAESRVAYTLGLLP*AAAFSTALRSASEP Trigger: AGGCTCAGAAGCAGAGCGGAGGGCTGTGGAGAAGGCGGCAGCCCATGGCAGCAAACCTAATGTGTATGCCACCCGGGACTCCGCTGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS GCA 90 bp | ACCAGTCACAACCAGCATTCCCTCTCGGATGGTGCCATCTCCAGCTaGATTTACACCACTGCCCCGAGACTCGGGTCTTCGGCCACCCCG | + |
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Preference number: 5 (lower is better) Translates to: TSHNQHSLSDGAISS*IYTTAPRLGSSATP Trigger: CGGGGTGGCCGAAGACCCGAGTCTCGGGGCAGTGGTGTAAATGCAGCTGGAGATGGCACCATCCGAGAGGGAATGCTGGTTGTGACTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 ENSMUST00000226907.2 ENSMUST00000227958.2 ENSMUST00000228123.2 |
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| CDS GCA 90 bp | GAGACAGCCAGATCCTGCCCCATCACAGCGTCCTGCGCCTCCACCTaGATTGCCACATCCTCAGCGGAGTCCCGGGTGGCATACACATTA | + |
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Preference number: 5 (lower is better) Translates to: ETARSCPITASCAST*IATSSAESRVAYTL Trigger: TAATGTGTATGCCACCCGGGACTCCGCTGAGGATGTGGCAATGCAGGTGGAGGCGCAGGACGCTGTGATGGGGCAGGATCTGGCTGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS GCA 90 bp | CGGCTACTACCACGATTGGTCAGCACCACAGAGACAGCCAGATCCTaGCCCATCACAGCGTCCTGCGCCTCCACCTGCATTGCCACATCC | + |
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Preference number: 5 (lower is better) Translates to: RLLPRLVSTTETARS*PITASCASTCIATS Trigger: GGATGTGGCAATGCAGGTGGAGGCGCAGGACGCTGTGATGGGGCAGGATCTGGCTGTCTCTGTGGTGCTGACCAATCGTGGTAGTAGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CCA 90 bp | CTTAGTCACTTGGGCCTTCCAGCCACCACTGCCTCCCTTACCCACTaGGATGATCACGTGGGTGCCCTTGCCCACCTCCGGATTGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: LSHLGLPATTASLTH*DDHVGALAHLRIAS Trigger: GGAAGCAATCCGGAGGTGGGCAAGGGCACCCACGTGATCATCCCAGTGGGTAAGGGAGGCAGTGGTGGCTGGAAGGCCCAAGTGACTAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CCA 90 bp | AGAGACAACCCGAGAGACACTGACTGGGTCCCCACGACCTCCATATaGCATCCCCCTCCGATCCAGGATGTACAGGCAGGCATCCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: RDNPRDTDWVPTTSI*HPPPIQDVQAGIQH Trigger: GTGCTGGATGCCTGCCTGTACATCCTGGATCGGAGGGGGATGCCATATGGAGGTCGTGGGGACCCAGTCAGTGTCTCTCGGGTTGTCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS TCA 90 bp | GGCAACTGGAACTCTCCAGCTTCAGAGCGGGTGCGGACAGTGAACTaGAACTTGCCAATGATGGCATTGGGGGAGGTGTGGACGCGTAGG | + |
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Preference number: 5 (lower is better) Translates to: GNWNSPASERVRTVN*NLPMMALGEVWTRR Trigger: CCTACGCGTCCACACCTCCCCCAATGCCATCATTGGCAAGTTTCAGTTCACTGTCCGCACCCGCTCTGAAGCTGGAGAGTTCCAGTTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS TCA 90 bp | GCATCTGAGAAACCGCTGCCTCCAGAGGCTGGGGCCACATCCACTTaGATAACACCGTGCACTTGGGAAAGCTGTGGACTGTCCAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: ASEKPLPPEAGATST*ITPCTWESCGLSRL Trigger: CAGCCTGGACAGTCCACAGCTTTCCCAAGTGCACGGTGTTATTCAAGTGGATGTGGCCCCAGCCTCTGGAGGCAGCGGTTTCTCAGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS GCA 90 bp | ACAGCAGATCCACACCAGTCACAACCAGCATTCCCTCTCGGATGGTaGCATCTCCAGCTGCATTTACACCACTGCCCCGAGACTCGGGTC | + |
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Preference number: 5 (lower is better) Translates to: TADPHQSQPAFPLGW*HLQLHLHHCPETRV Trigger: GACCCGAGTCTCGGGGCAGTGGTGTAAATGCAGCTGGAGATGGCACCATCCGAGAGGGAATGCTGGTTGTGACTGGTGTGGATCTGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 ENSMUST00000226907.2 ENSMUST00000227958.2 |
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| CDS CCA 90 bp | AGCACAGCAGATCCACACCAGTCACAACCAGCATTCCCTCTCGGATaGTGCCATCTCCAGCTGCATTTACACCACTGCCCCGAGACTCGG | + |
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Preference number: 5 (lower is better) Translates to: STADPHQSQPAFPLG*CHLQLHLHHCPETR Trigger: CCGAGTCTCGGGGCAGTGGTGTAAATGCAGCTGGAGATGGCACCATCCGAGAGGGAATGCTGGTTGTGACTGGTGTGGATCTGCTGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 ENSMUST00000226907.2 ENSMUST00000227958.2 |
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| CDS TCA 90 bp | TGCCATAGGTATGTTCTCCCCAGAGCGACTGTCACCTCCAGCATCTaGGAAACCGCTGCCTCCAGAGGCTGGGGCCACATCCACTTGAAT | + |
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Preference number: 5 (lower is better) Translates to: CHRYVLPRATVTSSI*ETAASRGWGHIHLN Trigger: ATTCAAGTGGATGTGGCCCCAGCCTCTGGAGGCAGCGGTTTCTCAGATGCTGGAGGTGACAGTCGCTCTGGGGAGAACATACCTATGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CCA 90 bp | CGGAAGGTGTGTTGCTTGGCTAGTACCTGCCCACTCTCCTTGACATaGCCTGAGACATTGAGCAACATTGCCCCCTGGTCCACAAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: RKVCCLASTCPLSLT*PETLSNIAPWSTRW Trigger: CCACCTTGTGGACCAGGGGGCAATGTTGCTCAATGTCTCAGGCCATGTCAAGGAGAGTGGGCAGGTACTAGCCAAGCAACACACCTTCCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS GCA 90 bp | AGGTCTGGGGTGCGCAAACGGAAGGTGTGTTGCTTGGCTAGTACCTaGCCACTCTCCTTGACATGGCCTGAGACATTGAGCAACATTGCC | + |
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Preference number: 5 (lower is better) Translates to: RSGVRKRKVCCLAST*PLSLTWPETLSNIA Trigger: GGCAATGTTGCTCAATGTCTCAGGCCATGTCAAGGAGAGTGGGCAGGTACTAGCCAAGCAACACACCTTCCGTTTGCGCACCCCAGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CCA 90 bp | TGCCCACGGCGCACAATCAGCTCATCATATTCAAACTCATCCGTGTaGTGCTCTCGGCGGTTCTGGTCTGATCGTGAGCACAGCAGATCC | + |
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Preference number: 5 (lower is better) Translates to: CPRRTISSSYSNSSV*CSRRFWSDREHSRS Trigger: GGATCTGCTGTGCTCACGATCAGACCAGAACCGCCGAGAGCACCACACGGATGAGTTTGAATATGATGAGCTGATTGTGCGCCGTGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 ENSMUST00000226907.2 ENSMUST00000227958.2 |
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| CDS CCA 90 bp | AAAGGTAGAGGTGCAACTTCACAGTGCGTCGGCTACTACCACGATTaGTCAGCACCACAGAGACAGCCAGATCCTGCCCCATCACAGCGT | + |
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Preference number: 5 (lower is better) Translates to: KGRGATSQCVGYYHD*SAPQRQPDPAPSQR Trigger: ACGCTGTGATGGGGCAGGATCTGGCTGTCTCTGTGGTGCTGACCAATCGTGGTAGTAGCCGACGCACTGTGAAGTTGCACCTCTACCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CCA 90 bp | CCTGGTCCACAAGGTGGGGCTTGTATTCCTTGTAGGCCACAGGCATaGTCACAGAGTCCGAGGCTCCTGGGGCTAATGTCACTTCCTTTT | + |
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Preference number: 5 (lower is better) Translates to: PGPQGGACIPCRPQA*SQSPRLLGLMSLPF Trigger: AAAAGGAAGTGACATTAGCCCCAGGAGCCTCGGACTCTGTGACCATGCCTGTGGCCTACAAGGAATACAAGCCCCACCTTGTGGACCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS GCA 90 bp | CCACGGCGCACAATCAGCTCATCATATTCAAACTCATCCGTGTGGTaGTCTCGGCGGTTCTGGTCTGATCGTGAGCACAGCAGATCCACA | + |
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Preference number: 5 (lower is better) Translates to: PRRTISSSYSNSSVW*SRRFWSDREHSRST Trigger: TGTGGATCTGCTGTGCTCACGATCAGACCAGAACCGCCGAGAGCACCACACGGATGAGTTTGAATATGATGAGCTGATTGTGCGCCGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 ENSMUST00000226907.2 ENSMUST00000227958.2 |
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| CDS GCA 90 bp | AGTAACGTAAGAGAAAGGTCTGGGGTGCGCAAACGGAAGGTGTGTTaGTTGGCTAGTACCTGCCCACTCTCCTTGACATGGCCTGAGACA | + |
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Preference number: 5 (lower is better) Translates to: SNVRERSGVRKRKVC*LASTCPLSLTWPET Trigger: TGTCTCAGGCCATGTCAAGGAGAGTGGGCAGGTACTAGCCAAGCAACACACCTTCCGTTTGCGCACCCCAGACCTTTCTCTTACGTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CCA 90 bp | AGCTCATCATATTCAAACTCATCCGTGTGGTGCTCTCGGCGGTTCTaGTCTGATCGTGAGCACAGCAGATCCACACCAGTCACAACCAGC | + |
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Preference number: 5 (lower is better) Translates to: SSSYSNSSVWCSRRF*SDREHSRSTPVTTS Trigger: GCTGGTTGTGACTGGTGTGGATCTGCTGTGCTCACGATCAGACCAGAACCGCCGAGAGCACCACACGGATGAGTTTGAATATGATGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 ENSMUST00000226907.2 ENSMUST00000227958.2 |
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| CDS TCA 90 bp | GTGACAGGCAGGGGGTTCTTGAACACGATCTGTACTCCACATTCCTaGCCAACAACTGCTGCTCCCAGTAACGTAAGAGAAAGGTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: VTGRGFLNTICTPHS*PTTAAPSNVRERSG Trigger: CCCAGACCTTTCTCTTACGTTACTGGGAGCAGCAGTTGTTGGTCAGGAATGTGGAGTACAGATCGTGTTCAAGAACCCCCTGCCTGTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS GCA 90 bp | GAGGACTCATATTCCCGGTTCAAGAAAAGGATCATGTGGAAGGGCTaGCCACGGCGCACAATCAGCTCATCATATTCAAACTCATCCGTG | + |
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Preference number: 5 (lower is better) Translates to: EDSYSRFKKRIMWKG*PRRTISSSYSNSSV Trigger: CACGGATGAGTTTGAATATGATGAGCTGATTGTGCGCCGTGGGCAGCCCTTCCACATGATCCTTTTCTTGAACCGGGAATATGAGTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 ENSMUST00000226907.2 ENSMUST00000227958.2 |
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| CDS GCA 90 bp | CCCATGGTCAAACTGACCATAGTTCCAGGTTCGTTCGCCAATCTGTaGTTCTGTTCCATAGTAGATTCTTCCAGACTCATTAAGCACATA | + |
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Preference number: 5 (lower is better) Translates to: PMVKLTIVPGSFANL*FCSIVDSSRLIKHI Trigger: TATGTGCTTAATGAGTCTGGAAGAATCTACTATGGAACAGAAGCACAGATTGGCGAACGAACCTGGAACTATGGTCAGTTTGACCATGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS GCA 90 bp | ATGGCTTTCTCTTCCACGTACACTATCTTAAAGCTGCCATCATCCTaGCGCTGCCAGTATACCTTATCGCTATTTACCTCAGCAAAAATG | + |
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Preference number: 5 (lower is better) Translates to: MAFSSTYTILKLPSS*RCQYTLSLFTSAKM Trigger: CATTTTTGCTGAGGTAAATAGCGATAAGGTATACTGGCAGCGGCAGGATGATGGCAGCTTTAAGATAGTGTACGTGGAAGAGAAAGCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CCA 90 bp | CCACACGTGGAAGTTCCAAACAGAATCATGGTTCAGATGTTCAAGTaGCTTCATGTTCTCATCAAAGTAGATGTCCATAGTGAGGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: PHVEVPNRIMVQMFK*LHVLIKVDVHSEGG Trigger: ACCTCCCTCACTATGGACATCTACTTTGATGAGAACATGAAGCCACTTGAACATCTGAACCATGATTCTGTTTGGAACTTCCACGTGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS GCA 90 bp | TTCTCTTCCACGTACACTATCTTAAAGCTGCCATCATCCTGCCGCTaGCAGTATACCTTATCGCTATTTACCTCAGCAAAAATGAAAGGT | + |
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Preference number: 5 (lower is better) Translates to: FSSTYTILKLPSSCR*QYTLSLFTSAKMKG Trigger: ACCTTTCATTTTTGCTGAGGTAAATAGCGATAAGGTATACTGGCAGCGGCAGGATGATGGCAGCTTTAAGATAGTGTACGTGGAAGAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CCA 72 bp | GTCTTCGGCCACCCCGAGAGTCCCTACCCCGGGAGCTaGTCCCTCTGCTTCTGGAGCCAGAAGGTTCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: VFGHPESPYPGS*SLCFWSQKVQV Trigger: GACCTGAACCTTCTGGCTCCAGAAGCAGAGGGACCAGCTCCCGGGGTAGGGACTCTCGGGGTGGCCGAAGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 ENSMUST00000226907.2 ENSMUST00000227958.2 ENSMUST00000228123.2 |
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| CDS CCA 72 bp | TTGGGCCTTCCAGCCACCACTGCCTCCCTTACCCACTaGGATGATCACGTGGGTGCCCTTGCCCACCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: LGLPATTASLTH*DDHVGALAHLR Trigger: CCGGAGGTGGGCAAGGGCACCCACGTGATCATCCCAGTGGGTAAGGGAGGCAGTGGTGGCTGGAAGGCCCAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CCA 72 bp | AGCTGGCGGGGGCCTGGTCGCACGGGAACAAACGTCTaGCGCAGTGTGACTGTCTCATTACCCCCGATGTCC | + |
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Preference number: 6 (lower is better) Translates to: SWRGPGRTGTNV*RSVTVSLPPMS Trigger: GGACATCGGGGGTAATGAGACAGTCACACTGCGCCAGACGTTTGTTCCCGTGCGACCAGGCCCCCGCCAGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS GCA 72 bp | CTCGGATGGTGCCATCTCCAGCTGCATTTACACCACTaGCCCGAGACTCGGGTCTTCGGCCACCCCGAGAGT | + |
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Preference number: 6 (lower is better) Translates to: LGWCHLQLHLHH*PETRVFGHPES Trigger: ACTCTCGGGGTGGCCGAAGACCCGAGTCTCGGGGCAGTGGTGTAAATGCAGCTGGAGATGGCACCATCCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 ENSMUST00000226907.2 ENSMUST00000227958.2 ENSMUST00000228123.2 |
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| CDS CCA 72 bp | CCGAGAGACACTGACTGGGTCCCCACGACCTCCATATaGCATCCCCCTCCGATCCAGGATGTACAGGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: PRDTDWVPTTSI*HPPPIQDVQAG Trigger: GCCTGCCTGTACATCCTGGATCGGAGGGGGATGCCATATGGAGGTCGTGGGGACCCAGTCAGTGTCTCTCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CCA 72 bp | GCAGGATCTCCACACTGCCCACCCACGCTGAGGGGTTaGTGCCTCGAGAGTAGTCACCGGTCCAGTTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: AGSPHCPPTLRG*CLESSHRSSSQ Trigger: TTGGGAACTGGACCGGTGACTACTCTCGAGGCACCAACCCCTCAGCGTGGGTGGGCAGTGTGGAGATCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CCA 72 bp | GAGTCCCGGGTGGCATACACATTAGGTTTGCTGCCATaGGCTGCCGCCTTCTCCACAGCCCTCCGCTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: ESRVAYTLGLLP*AAAFSTALRSA Trigger: AGCAGAGCGGAGGGCTGTGGAGAAGGCGGCAGCCCATGGCAGCAAACCTAATGTGTATGCCACCCGGGACTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CAA 72 bp | TCCTCAGCGGAGTCCCGGGTGGCATACACATTAGGTTaGCTGCCATGGGCTGCCGCCTTCTCCACAGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: SSAESRVAYTLG*LPWAAAFSTAL Trigger: GAGGGCTGTGGAGAAGGCGGCAGCCCATGGCAGCAAACCTAATGTGTATGCCACCCGGGACTCCGCTGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CAA 90 bp | ATTGCCACATCCTCAGCGGAGTCCCGGGTGGCATACACATTAGGTTaGCTGCCATGGGCTGCCGCCTTCTCCACAGCCCTCCGCTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: IATSSAESRVAYTLG*LPWAAAFSTALRSA Trigger: AGCAGAGCGGAGGGCTGTGGAGAAGGCGGCAGCCCATGGCAGCAAACCTAATGTGTATGCCACCCGGGACTCCGCTGAGGATGTGGCAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS GCA 72 bp | GGATCTCCACACTGCCCACCCACGCTGAGGGGTTGGTaGCTCGAGAGTAGTCACCGGTCCAGTTCCCAATCA | + |
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Preference number: 6 (lower is better) Translates to: GSPHCPPTLRGW*LESSHRSSSQS Trigger: TGATTGGGAACTGGACCGGTGACTACTCTCGAGGCACCAACCCCTCAGCGTGGGTGGGCAGTGTGGAGATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS GCA 72 bp | CCACGATTGGTCAGCACCACAGAGACAGCCAGATCCTaGCCCATCACAGCGTCCTGCGCCTCCACCTGCATT | + |
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Preference number: 6 (lower is better) Translates to: PRLVSTTETARS*PITASCASTCI Trigger: AATGCAGGTGGAGGCGCAGGACGCTGTGATGGGGCAGGATCTGGCTGTCTCTGTGGTGCTGACCAATCGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CCA 72 bp | CCACCACTGCCTCCCTTACCCACTGGGATGATCACGTaGGTGCCCTTGCCCACCTCCGGATTGCTTCCAATG | + |
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Preference number: 6 (lower is better) Translates to: PPLPPLPTGMIT*VPLPTSGLLPM Trigger: CATTGGAAGCAATCCGGAGGTGGGCAAGGGCACCCACGTGATCATCCCAGTGGGTAAGGGAGGCAGTGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CAA 90 bp | CCACCACTGCCTCCCTTACCCACTGGGATGATCACGTGGGTGCCCTaGCCCACCTCCGGATTGCTTCCAATGAGGAGCTCAAGGGCAATG | + |
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Preference number: 6 (lower is better) Translates to: PPLPPLPTGMITWVP*PTSGLLPMRSSRAM Trigger: CATTGCCCTTGAGCTCCTCATTGGAAGCAATCCGGAGGTGGGCAAGGGCACCCACGTGATCATCCCAGTGGGTAAGGGAGGCAGTGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS TCA 72 bp | TATGTTCTCCCCAGAGCGACTGTCACCTCCAGCATCTaGGAAACCGCTGCCTCCAGAGGCTGGGGCCACATC | + |
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Preference number: 6 (lower is better) Translates to: YVLPRATVTSSI*ETAASRGWGHI Trigger: GATGTGGCCCCAGCCTCTGGAGGCAGCGGTTTCTCAGATGCTGGAGGTGACAGTCGCTCTGGGGAGAACATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CAA 72 bp | CCTCCCTTACCCACTGGGATGATCACGTGGGTGCCCTaGCCCACCTCCGGATTGCTTCCAATGAGGAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: PPLPTGMITWVP*PTSGLLPMRSS Trigger: TGAGCTCCTCATTGGAAGCAATCCGGAGGTGGGCAAGGGCACCCACGTGATCATCCCAGTGGGTAAGGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS GCA 72 bp | AACCAGCATTCCCTCTCGGATGGTGCCATCTCCAGCTaGATTTACACCACTGCCCCGAGACTCGGGTCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: NQHSLSDGAISS*IYTTAPRLGSS Trigger: CGAAGACCCGAGTCTCGGGGCAGTGGTGTAAATGCAGCTGGAGATGGCACCATCCGAGAGGGAATGCTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 ENSMUST00000226907.2 ENSMUST00000227958.2 ENSMUST00000228123.2 |
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| CDS GCA 72 bp | CCACACCAGTCACAACCAGCATTCCCTCTCGGATGGTaGCATCTCCAGCTGCATTTACACCACTGCCCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: PHQSQPAFPLGW*HLQLHLHHCPE Trigger: CTCGGGGCAGTGGTGTAAATGCAGCTGGAGATGGCACCATCCGAGAGGGAATGCTGGTTGTGACTGGTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 ENSMUST00000226907.2 ENSMUST00000227958.2 ENSMUST00000228123.2 |
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| CDS CCA 72 bp | GGTGCAACTTCACAGTGCGTCGGCTACTACCACGATTaGTCAGCACCACAGAGACAGCCAGATCCTGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GATSQCVGYYHD*SAPQRQPDPAP Trigger: TGGGGCAGGATCTGGCTGTCTCTGTGGTGCTGACCAATCGTGGTAGTAGCCGACGCACTGTGAAGTTGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CAA 72 bp | GGGATGATCACGTGGGTGCCCTTGCCCACCTCCGGATaGCTTCCAATGAGGAGCTCAAGGGCAATGCGATCA | + |
|
Preference number: 6 (lower is better) Translates to: GMITWVPLPTSG*LPMRSSRAMRS Trigger: TGATCGCATTGCCCTTGAGCTCCTCATTGGAAGCAATCCGGAGGTGGGCAAGGGCACCCACGTGATCATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CAA 72 bp | AGGTGCAACTTCACAGTGCGTCGGCTACTACCACGATaGGTCAGCACCACAGAGACAGCCAGATCCTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: RCNFTVRRLLPR*VSTTETARSCP Trigger: GGGGCAGGATCTGGCTGTCTCTGTGGTGCTGACCAATCGTGGTAGTAGCCGACGCACTGTGAAGTTGCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CAA 72 bp | AGTACCTGCCCACTCTCCTTGACATGGCCTGAGACATaGAGCAACATTGCCCCCTGGTCCACAAGGTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: STCPLSLTWPET*SNIAPWSTRWG Trigger: GCCCCACCTTGTGGACCAGGGGGCAATGTTGCTCAATGTCTCAGGCCATGTCAAGGAGAGTGGGCAGGTACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS TCA 72 bp | AAACCGCTGCCTCCAGAGGCTGGGGCCACATCCACTTaGATAACACCGTGCACTTGGGAAAGCTGTGGACTG | + |
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Preference number: 6 (lower is better) Translates to: KPLPPEAGATST*ITPCTWESCGL Trigger: CAGTCCACAGCTTTCCCAAGTGCACGGTGTTATTCAAGTGGATGTGGCCCCAGCCTCTGGAGGCAGCGGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CCA 72 bp | GATCCACACCAGTCACAACCAGCATTCCCTCTCGGATaGTGCCATCTCCAGCTGCATTTACACCACTGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: DPHQSQPAFPLG*CHLQLHLHHCP Trigger: GGGGCAGTGGTGTAAATGCAGCTGGAGATGGCACCATCCGAGAGGGAATGCTGGTTGTGACTGGTGTGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 ENSMUST00000226907.2 ENSMUST00000227958.2 ENSMUST00000228123.2 |
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| CDS CCA 72 bp | CAAGGTGGGGCTTGTATTCCTTGTAGGCCACAGGCATaGTCACAGAGTCCGAGGCTCCTGGGGCTAATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: QGGACIPCRPQA*SQSPRLLGLMS Trigger: TGACATTAGCCCCAGGAGCCTCGGACTCTGTGACCATGCCTGTGGCCTACAAGGAATACAAGCCCCACCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CAA 72 bp | GAGTCCGAGGCTCCTGGGGCTAATGTCACTTCCTTTTaGGCCTCCTTGAAGGTAGGCCCAGAGACACCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ESEAPGANVTSF*ASLKVGPETPV Trigger: CACTGGTGTCTCTGGGCCTACCTTCAAGGAGGCCAAAAAGGAAGTGACATTAGCCCCAGGAGCCTCGGACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CAA 72 bp | CTCTGTAATCCAGAACCTTCGAGCCGGAAGACGACGTaGGTGAGGGTGACAGGCAGGGGGTTCTTGAACACG | + |
|
Preference number: 6 (lower is better) Translates to: LCNPEPSSRKTT*VRVTGRGFLNT Trigger: CGTGTTCAAGAACCCCCTGCCTGTCACCCTCACCAACGTCGTCTTCCGGCTCGAAGGTTCTGGATTACAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CAA 72 bp | GGCTGGGGCCACATCCACTTGAATAACACCGTGCACTaGGGAAAGCTGTGGACTGTCCAGGCTGGCAATGAG | + |
|
Preference number: 6 (lower is better) Translates to: GWGHIHLNNTVH*GKLWTVQAGNE Trigger: CTCATTGCCAGCCTGGACAGTCCACAGCTTTCCCAAGTGCACGGTGTTATTCAAGTGGATGTGGCCCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CAA 72 bp | GAAACCGCTGCCTCCAGAGGCTGGGGCCACATCCACTaGAATAACACCGTGCACTTGGGAAAGCTGTGGACT | + |
|
Preference number: 6 (lower is better) Translates to: ETAASRGWGHIH*NNTVHLGKLWT Trigger: AGTCCACAGCTTTCCCAAGTGCACGGTGTTATTCAAGTGGATGTGGCCCCAGCCTCTGGAGGCAGCGGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CAA 90 bp | ATGGCATTGGGGGAGGTGTGGACGCGTAGGTTTAGGTTGTGTCCGTaGTTCTTAGTCACTTGGGCCTTCCAGCCACCACTGCCTCCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: MALGEVWTRRFRLCP*FLVTWAFQPPLPPL Trigger: TAAGGGAGGCAGTGGTGGCTGGAAGGCCCAAGTGACTAAGAACAACGGACACAACCTAAACCTACGCGTCCACACCTCCCCCAATGCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CAA 90 bp | TGCTTGGCTAGTACCTGCCCACTCTCCTTGACATGGCCTGAGACATaGAGCAACATTGCCCCCTGGTCCACAAGGTGGGGCTTGTATTCC | + |
|
Preference number: 6 (lower is better) Translates to: CLASTCPLSLTWPET*SNIAPWSTRWGLYS Trigger: GGAATACAAGCCCCACCTTGTGGACCAGGGGGCAATGTTGCTCAATGTCTCAGGCCATGTCAAGGAGAGTGGGCAGGTACTAGCCAAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CAA 90 bp | CGCAAACGGAAGGTGTGTTGCTTGGCTAGTACCTGCCCACTCTCCTaGACATGGCCTGAGACATTGAGCAACATTGCCCCCTGGTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RKRKVCCLASTCPLS*TWPETLSNIAPWST Trigger: TGTGGACCAGGGGGCAATGTTGCTCAATGTCTCAGGCCATGTCAAGGAGAGTGGGCAGGTACTAGCCAAGCAACACACCTTCCGTTTGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS TCA 72 bp | AACTCTCCAGCTTCAGAGCGGGTGCGGACAGTGAACTaGAACTTGCCAATGATGGCATTGGGGGAGGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: NSPASERVRTVN*NLPMMALGEVW Trigger: CCACACCTCCCCCAATGCCATCATTGGCAAGTTTCAGTTCACTGTCCGCACCCGCTCTGAAGCTGGAGAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS GCA 72 bp | GTGCGCAAACGGAAGGTGTGTTGCTTGGCTAGTACCTaGCCACTCTCCTTGACATGGCCTGAGACATTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: VRKRKVCCLAST*PLSLTWPETLS Trigger: GCTCAATGTCTCAGGCCATGTCAAGGAGAGTGGGCAGGTACTAGCCAAGCAACACACCTTCCGTTTGCGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS GCA 72 bp | AGAGAAAGGTCTGGGGTGCGCAAACGGAAGGTGTGTTaGTTGGCTAGTACCTGCCCACTCTCCTTGACATGG | + |
|
Preference number: 6 (lower is better) Translates to: RERSGVRKRKVC*LASTCPLSLTW Trigger: CCATGTCAAGGAGAGTGGGCAGGTACTAGCCAAGCAACACACCTTCCGTTTGCGCACCCCAGACCTTTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CCA 72 bp | TGTTGCTTGGCTAGTACCTGCCCACTCTCCTTGACATaGCCTGAGACATTGAGCAACATTGCCCCCTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: CCLASTCPLSLT*PETLSNIAPWS Trigger: GGACCAGGGGGCAATGTTGCTCAATGTCTCAGGCCATGTCAAGGAGAGTGGGCAGGTACTAGCCAAGCAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CAA 72 bp | GTCTCATTACCCCCGATGTCCCCGACATTGAGGACCTaGGGTCTCTGTAATCCAGAACCTTCGAGCCGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VSLPPMSPTLRT*GLCNPEPSSRK Trigger: CTTCCGGCTCGAAGGTTCTGGATTACAGAGACCCAAGGTCCTCAATGTCGGGGACATCGGGGGTAATGAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CAA 90 bp | ACCTTGGGTCTCTGTAATCCAGAACCTTCGAGCCGGAAGACGACGTaGGTGAGGGTGACAGGCAGGGGGTTCTTGAACACGATCTGTACT | + |
|
Preference number: 6 (lower is better) Translates to: TLGLCNPEPSSRKTT*VRVTGRGFLNTICT Trigger: AGTACAGATCGTGTTCAAGAACCCCCTGCCTGTCACCCTCACCAACGTCGTCTTCCGGCTCGAAGGTTCTGGATTACAGAGACCCAAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CAA 90 bp | AGTGTGACTGTCTCATTACCCCCGATGTCCCCGACATTGAGGACCTaGGGTCTCTGTAATCCAGAACCTTCGAGCCGGAAGACGACGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SVTVSLPPMSPTLRT*GLCNPEPSSRKTTL Trigger: CAACGTCGTCTTCCGGCTCGAAGGTTCTGGATTACAGAGACCCAAGGTCCTCAATGTCGGGGACATCGGGGGTAATGAGACAGTCACACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CCA 72 bp | TATTCAAACTCATCCGTGTGGTGCTCTCGGCGGTTCTaGTCTGATCGTGAGCACAGCAGATCCACACCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: YSNSSVWCSRRF*SDREHSRSTPV Trigger: GACTGGTGTGGATCTGCTGTGCTCACGATCAGACCAGAACCGCCGAGAGCACCACACGGATGAGTTTGAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 ENSMUST00000226907.2 ENSMUST00000227958.2 |
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| CDS CCA 72 bp | CGTAGGTTTAGGTTGTGTCCGTTGTTCTTAGTCACTTaGGCCTTCCAGCCACCACTGCCTCCCTTACCCACT | + |
|
Preference number: 6 (lower is better) Translates to: RRFRLCPLFLVT*AFQPPLPPLPT Trigger: AGTGGGTAAGGGAGGCAGTGGTGGCTGGAAGGCCCAAGTGACTAAGAACAACGGACACAACCTAAACCTACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CAA 90 bp | AACGTAAGAGAAAGGTCTGGGGTGCGCAAACGGAAGGTGTGTTGCTaGGCTAGTACCTGCCCACTCTCCTTGACATGGCCTGAGACATTG | + |
|
Preference number: 6 (lower is better) Translates to: NVRERSGVRKRKVCC*ASTCPLSLTWPETL Trigger: CAATGTCTCAGGCCATGTCAAGGAGAGTGGGCAGGTACTAGCCAAGCAACACACCTTCCGTTTGCGCACCCCAGACCTTTCTCTTACGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CCA 72 bp | CGCACAATCAGCTCATCATATTCAAACTCATCCGTGTaGTGCTCTCGGCGGTTCTGGTCTGATCGTGAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RTISSSYSNSSV*CSRRFWSDREH Trigger: GTGCTCACGATCAGACCAGAACCGCCGAGAGCACCACACGGATGAGTTTGAATATGATGAGCTGATTGTGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 ENSMUST00000226907.2 ENSMUST00000227958.2 |
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| CDS CCA 72 bp | GAGGACTCATATTCCCGGTTCAAGAAAAGGATCATGTaGAAGGGCTGCCCACGGCGCACAATCAGCTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: EDSYSRFKKRIM*KGCPRRTISSS Trigger: TGATGAGCTGATTGTGCGCCGTGGGCAGCCCTTCCACATGATCCTTTTCTTGAACCGGGAATATGAGTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 ENSMUST00000226907.2 ENSMUST00000227958.2 |
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| CDS TCA 72 bp | CTGCTTCTGAGCCTTCTGGGTGCTTATAGATGTGGGTaGTGTCCTCTCGATTGTTGGAGTGGATCGCCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LLLSLLGAYRCG*CPLDCWSGSPL Trigger: CAAAGGCGATCCACTCCAACAATCGAGAGGACATCACCCACATCTATAAGCACCCAGAAGGCTCAGAAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS GCA 72 bp | ACAATCAGCTCATCATATTCAAACTCATCCGTGTGGTaGTCTCGGCGGTTCTGGTCTGATCGTGAGCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: TISSSYSNSSVW*SRRFWSDREHS Trigger: GCTGTGCTCACGATCAGACCAGAACCGCCGAGAGCACCACACGGATGAGTTTGAATATGATGAGCTGATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 ENSMUST00000226907.2 ENSMUST00000227958.2 |
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| CDS CCA 72 bp | GACTCATTAAGCACATATTCTTGCCGCCAGTCCTCATaGTCCACATACACTATGTCCTCTGGGCACCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: DSLSTYSCRQSS*STYTMSSGHQG Trigger: TCCCTGGTGCCCAGAGGACATAGTGTATGTGGACCATGAGGACTGGCGGCAAGAATATGTGCTTAATGAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS TCA 72 bp | AGGGGGTTCTTGAACACGATCTGTACTCCACATTCCTaGCCAACAACTGCTGCTCCCAGTAACGTAAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RGFLNTICTPHS*PTTAAPSNVRE Trigger: TTCTCTTACGTTACTGGGAGCAGCAGTTGTTGGTCAGGAATGTGGAGTACAGATCGTGTTCAAGAACCCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CCA 72 bp | AGATCTGGCCTCTTCATCCAGCAGTCGTTCCACACGTaGAAGTTCCAAACAGAATCATGGTTCAGATGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RSGLFIQQSFHT*KFQTESWFRCS Trigger: TGAACATCTGAACCATGATTCTGTTTGGAACTTCCACGTGTGGAACGACTGCTGGATGAAGAGGCCAGATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS GCA 72 bp | TCTTCCACGTACACTATCTTAAAGCTGCCATCATCCTaGCGCTGCCAGTATACCTTATCGCTATTTACCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSTYTILKLPSS*RCQYTLSLFTS Trigger: TGAGGTAAATAGCGATAAGGTATACTGGCAGCGGCAGGATGATGGCAGCTTTAAGATAGTGTACGTGGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS GCA 72 bp | ACGTACACTATCTTAAAGCTGCCATCATCCTGCCGCTaGCAGTATACCTTATCGCTATTTACCTCAGCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: TYTILKLPSSCR*QYTLSLFTSAK Trigger: TTTTGCTGAGGTAAATAGCGATAAGGTATACTGGCAGCGGCAGGATGATGGCAGCTTTAAGATAGTGTACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS GCA 72 bp | AAACTGACCATAGTTCCAGGTTCGTTCGCCAATCTGTaGTTCTGTTCCATAGTAGATTCTTCCAGACTCATT | + |
|
Preference number: 6 (lower is better) Translates to: KLTIVPGSFANL*FCSIVDSSRLI Trigger: AATGAGTCTGGAAGAATCTACTATGGAACAGAAGCACAGATTGGCGAACGAACCTGGAACTATGGTCAGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS TCA 72 bp | GCCAGTATACCTTATCGCTATTTACCTCAGCAAAAATaGAAGGTGTGTCATACTTCATGTAGACTAAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: ASIPYRYLPQQK*KVCHTSCRLSH Trigger: ATGGCTTAGTCTACATGAAGTATGACACACCTTTCATTTTTGCTGAGGTAAATAGCGATAAGGTATACTGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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| CDS CCA 72 bp | GAAGTTCCAAACAGAATCATGGTTCAGATGTTCAAGTaGCTTCATGTTCTCATCAAAGTAGATGTCCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: EVPNRIMVQMFK*LHVLIKVDVHS Trigger: ACTATGGACATCTACTTTGATGAGAACATGAAGCCACTTGAACATCTGAACCATGATTCTGTTTGGAACTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002389.9 ENSMUST00000168729.8 ENSMUST00000178034.9 |
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