RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TGIF2LX2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000100194

Ensembl transcript IDs: ENSMUST00000072518.8

Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CCAGGGGAGGAGAATAAAGTTAGCAATTTGTTAAAGTTGAATATCATGGATAGTCAGGTTGAGTATAAATaGACCTCCCAGAGTTCAAAG +
Preference number: 2 (lower is better)
Translates to: PGEENKVSNLLKLNIMDSQVEYK*TSQSSK
Trigger: CTTTGAACTCTGGGAGGTTCATTTATACTCAACCTG...ACTATCCATGATATTCAACTTTAACAAATTGCTAACTTTATTCTCCTCCCCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072518.8
3UTR-3UTR CAA 90 bp CCAGGGGAGGAGAATAAAGTTAGCAATTTGTTAAAGTTGAATATCATGGATAGTTACAAGCTAATCAGGTaGAGTATAAATGAACCTCCC +
Preference number: 3 (lower is better)
Translates to: PGEENKVSNLLKLNIMDSYKLIR*SINEPP
Trigger: GGGAGGTTCATTTATACTCAACCTGATTAGCTTGTA...ACTATCCATGATATTCAACTTTAACAAATTGCTAACTTTATTCTCCTCCCCTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072518.8
CDS-3UTR CCA 90 bp GCTTGCATGATGTTTAATAATAAATATATAGGGCTAAAGTCCAGGGGAGGAGAAGCTTCTGGGCTGCATTaGCAGCCTGGCCTTCGTGAC +
Preference number: 4 (lower is better)
Translates to: ACMMFNNKYIGLKSRGGEASGLH*QPGLRD
Trigger: GTCACGAAGGCCAGGCTGCCAATGCAGCCCAGAAGC...TTCTCCTCCCCTGGACTTTAGCCCTATATATTTATTATTAAACATCATGCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072518.8
CDS-3UTR CCA 90 bp GCTTGCATGATGTTTAATAATAAATATATAGGGCTAAAGTCCAGGGGAGGAGAATACATGAACTGTTGTTaGGGACCCTGTGGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: ACMMFNNKYIGLKSRGGEYMNCC*GPCGLG
Trigger: CCCCAACCCACAGGGTCCCCAACAACAGTTCATGTA...TTCTCCTCCCCTGGACTTTAGCCCTATATATTTATTATTAAACATCATGCAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072518.8
CDS-3UTR CCA 90 bp CCAGGGGAGGAGAATAAAGTTAGCAATTTGTTAAAGTTGAATATCATGGATAGTCTTCACAGACTTCAATaGCAACATGTTTCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: PGEENKVSNLLKLNIMDSLHRLQ*QHVSSR
Trigger: CCGAGAGGAAACATGTTGCCATTGAAGTCTGTGAAG...ACTATCCATGATATTCAACTTTAACAAATTGCTAACTTTATTCTCCTCCCCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072518.8
CDS-3UTR CCA 90 bp GCTTGCATGATGTTTAATAATAAATATATAGGGCTAAAGTCCAGGGGAGGAGAAGATAACCTTCTGGTTTaGAGAAGACTCCAGATATGG +
Preference number: 4 (lower is better)
Translates to: ACMMFNNKYIGLKSRGGEDNLLV*RRLQIW
Trigger: CCATATCTGGAGTCTTCTCCAAACCAGAAGGTTATC...TTCTCCTCCCCTGGACTTTAGCCCTATATATTTATTATTAAACATCATGCAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072518.8
CDS-3UTR CCA 90 bp CCAGGGGAGGAGAATAAAGTTAGCAATTTGTTAAAGTTGAATATCATGGATAGTTCAGCGATAACCTTCTaGTTTGGAGAAGACTCCAGA +
Preference number: 4 (lower is better)
Translates to: PGEENKVSNLLKLNIMDSSAITF*FGEDSR
Trigger: TCTGGAGTCTTCTCCAAACCAGAAGGTTATCGCTGA...ACTATCCATGATATTCAACTTTAACAAATTGCTAACTTTATTCTCCTCCCCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072518.8
CDS-3UTR TCA 90 bp CCAGGGGAGGAGAATAAAGTTAGCAATTTGTTAAAGTTGAATATCATGGATAGTCCAAGGCTCAGTGATTaGAATCTTCTCTTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: PGEENKVSNLLKLNIMDSPRLSD*NLLFFL
Trigger: GAGAAAGAAGAGAAGATTTCAATCACTGAGCCTTGG...ACTATCCATGATATTCAACTTTAACAAATTGCTAACTTTATTCTCCTCCCCTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072518.8
CDS-3UTR CCA 90 bp GCTTGCATGATGTTTAATAATAAATATATAGGGCTAAAGTCCAGGGGAGGAGAATATTTCATAAAGTCCTaGGTTTCTTCCGGACTACCT +
Preference number: 4 (lower is better)
Translates to: ACMMFNNKYIGLKSRGGEYFIKS*VSSGLP
Trigger: AGGTAGTCCGGAAGAAACCCAGGACTTTATGAAATA...TTCTCCTCCCCTGGACTTTAGCCCTATATATTTATTATTAAACATCATGCAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072518.8
CDS CCA 72 bp CCTCGGATGGATTGGAGTGCTGCTTCTGGGCTGCATTaGCAGCCTGGCCTTCGTGACTCAAGCTGTATGGTT +
Preference number: 6 (lower is better)
Translates to: PRMDWSAASGLH*QPGLRDSSCMV
Trigger: AACCATACAGCTTGAGTCACGAAGGCCAGGCTGCCAATGCAGCCCAGAAGCAGCACTCCAATCCATCCGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072518.8
CDS CCA 72 bp ACAGAGCCAGTCACGGAGGATCTTCACAGACTTCAATaGCAACATGTTTCCTCTCGGAAGCTCCCGACTGTC +
Preference number: 6 (lower is better)
Translates to: TEPVTEDLHRLQ*QHVSSRKLPTV
Trigger: GACAGTCGGGAGCTTCCGAGAGGAAACATGTTGCCATTGAAGTCTGTGAAGATCCTCCGTGACTGGCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072518.8
CDS TCA 72 bp GAAGACTCCAGATATGGCACTTTCTCTTCGGAATCTTaGCGTATTGGCAGGGGCAGATCCTGCATATCGGCG +
Preference number: 6 (lower is better)
Translates to: EDSRYGTFSSES*RIGRGRSCISA
Trigger: CGCCGATATGCAGGATCTGCCCCTGCCAATACGTCAAGATTCCGAAGAGAAAGTGCCATATCTGGAGTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072518.8
CDS CAA 72 bp CCAGATATGGCACTTTCTCTTCGGAATCTTGACGTATaGGCAGGGGCAGATCCTGCATATCGGCGTTTTCGT +
Preference number: 6 (lower is better)
Translates to: PDMALSLRNLDV*AGADPAYRRFR
Trigger: ACGAAAACGCCGATATGCAGGATCTGCCCCTGCCAATACGTCAAGATTCCGAAGAGAAAGTGCCATATCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072518.8
CDS CAA 72 bp AGAAGACTCCAGATATGGCACTTTCTCTTCGGAATCTaGACGTATTGGCAGGGGCAGATCCTGCATATCGGC +
Preference number: 6 (lower is better)
Translates to: RRLQIWHFLFGI*TYWQGQILHIG
Trigger: GCCGATATGCAGGATCTGCCCCTGCCAATACGTCAAGATTCCGAAGAGAAAGTGCCATATCTGGAGTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072518.8
CDS CCA 72 bp CAGATATGGCACTTTCTCTTCGGAATCTTGACGTATTaGCAGGGGCAGATCCTGCATATCGGCGTTTTCGTT +
Preference number: 6 (lower is better)
Translates to: QIWHFLFGILTY*QGQILHIGVFV
Trigger: AACGAAAACGCCGATATGCAGGATCTGCCCCTGCCAATACGTCAAGATTCCGAAGAGAAAGTGCCATATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072518.8
CDS CCA 72 bp CAACATGTAGAAGCTGCTAAAATCAGGCTTTTCCTCTaGCCATGCAACTTCAGGAGAAGACCAAGGCTCAGT +
Preference number: 6 (lower is better)
Translates to: QHVEAAKIRLFL*PCNFRRRPRLS
Trigger: ACTGAGCCTTGGTCTTCTCCTGAAGTTGCATGGCCAGAGGAAAAGCCTGATTTTAGCAGCTTCTACATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072518.8
CDS TCA 72 bp GGCAACATGTTTCCTCTCGGAAGCTCCCGACTGTCATaGAACTTCATCTTACAGGTTCTCTCAAGTCTTATC +
Preference number: 6 (lower is better)
Translates to: GNMFPLGSSRLS*NFILQVLSSLI
Trigger: GATAAGACTTGAGAGAACCTGTAAGATGAAGTTTCATGACAGTCGGGAGCTTCCGAGAGGAAACATGTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072518.8
CDS CCA 72 bp AGCGATAACCTTCTGGTTTGGAGAAGACTCCAGATATaGCACTTTCTCTTCGGAATCTTGACGTATTGGCAG +
Preference number: 6 (lower is better)
Translates to: SDNLLVWRRLQI*HFLFGILTYWQ
Trigger: CTGCCAATACGTCAAGATTCCGAAGAGAAAGTGCCATATCTGGAGTCTTCTCCAAACCAGAAGGTTATCGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072518.8
CDS TCA 72 bp CTGGCCATGCAACTTCAGGAGAAGACCAAGGCTCAGTaGTTGAAATCTTCTCTTCTTTCTCTATGTTGTCTT +
Preference number: 6 (lower is better)
Translates to: LAMQLQEKTKAQ*LKSSLLSLCCL
Trigger: AAGACAACATAGAGAAAGAAGAGAAGATTTCAATCACTGAGCCTTGGTCTTCTCCTGAAGTTGCATGGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072518.8
CDS CCA 72 bp TTTCTCTATGTTGTCTTCAGCGATAACCTTCTGGTTTaGAGAAGACTCCAGATATGGCACTTTCTCTTCGGA +
Preference number: 6 (lower is better)
Translates to: FLYVVFSDNLLV*RRLQIWHFLFG
Trigger: TCCGAAGAGAAAGTGCCATATCTGGAGTCTTCTCCAAACCAGAAGGTTATCGCTGAAGACAACATAGAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072518.8
CDS CCA 72 bp TCTTCTTTCTCTATGTTGTCTTCAGCGATAACCTTCTaGTTTGGAGAAGACTCCAGATATGGCACTTTCTCT +
Preference number: 6 (lower is better)
Translates to: SSFSMLSSAITF*FGEDSRYGTFS
Trigger: AGAGAAAGTGCCATATCTGGAGTCTTCTCCAAACCAGAAGGTTATCGCTGAAGACAACATAGAGAAAGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072518.8