Pregenerated sensors for TGIF2LX1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000100133

Ensembl transcript IDs: ENSMUST00000073857.6

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CTGGTGCTCACAGAGCCAGTCACGGAGGATCTTCACAGACTTCAATaGCAACATGTTTCCTCTCGGAAGCTCCCGACTGTCATGAAACTT	+
Preference number: 5 (lower is better) Translates to: LVLTEPVTEDLHRLQ*QHVSSRKLPTVMKL Trigger: AAGTTTCATGACAGTCGGGAGCTTCCGAGAGGAAACATGTTGCCATTGAAGTCTGTGAAGATCCTCCGTGACTGGCTCTGTGAGCACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073857.6
CDS CCA 90 bp	GTTGTCTTCAGCGATAACCTTCTGGTTTGGAGAAGACTCCAGATATaGCACTTTCTCTTCGGAATCTTGACGTATTGGCAGGGGCAGATC	+
Preference number: 5 (lower is better) Translates to: VVFSDNLLVWRRLQI*HFLFGILTYWQGQI Trigger: GATCTGCCCCTGCCAATACGTCAAGATTCCGAAGAGAAAGTGCCATATCTGGAGTCTTCTCCAAACCAGAAGGTTATCGCTGAAGACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073857.6
CDS TCA 90 bp	TTCCTCTGGCCATGCAACTTCAGGAGAAGACCAAGGCTCAGTGATTaGAATCTTCTCTTCTTTCTCTATGTTGTCTTCAGCGATAACCTT	+
Preference number: 5 (lower is better) Translates to: FLWPCNFRRRPRLSD*NLLFFLYVVFSDNL Trigger: AAGGTTATCGCTGAAGACAACATAGAGAAAGAAGAGAAGATTTCAATCACTGAGCCTTGGTCTTCTCCTGAAGTTGCATGGCCAGAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073857.6
CDS CCA 90 bp	CTTCTCTTCTTTCTCTATGTTGTCTTCAGCGATAACCTTCTGGTTTaGAGAAGACTCCAGATATGGCACTTTCTCTTCGGAATCTTGACG	+
Preference number: 5 (lower is better) Translates to: LLFFLYVVFSDNLLV*RRLQIWHFLFGILT Trigger: CGTCAAGATTCCGAAGAGAAAGTGCCATATCTGGAGTCTTCTCCAAACCAGAAGGTTATCGCTGAAGACAACATAGAGAAAGAAGAGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073857.6
CDS CCA 90 bp	GAAATCTTCTCTTCTTTCTCTATGTTGTCTTCAGCGATAACCTTCTaGTTTGGAGAAGACTCCAGATATGGCACTTTCTCTTCGGAATCT	+
Preference number: 5 (lower is better) Translates to: EIFSSFSMLSSAITF*FGEDSRYGTFSSES Trigger: AGATTCCGAAGAGAAAGTGCCATATCTGGAGTCTTCTCCAAACCAGAAGGTTATCGCTGAAGACAACATAGAGAAAGAAGAGAAGATTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073857.6
CDS GCA 72 bp	TTAAACTGTGTCTTGACCTCCTCGGATGGATTGGAGTaGTGCTTCTGGGCTGCATTGGCAGCCTGGCCTTCG	+
Preference number: 6 (lower is better) Translates to: LNCVLTSSDGLE*CFWAALAAWPS Trigger: CGAAGGCCAGGCTGCCAATGCAGCCCAGAAGCAGCACTCCAATCCATCCGAGGAGGTCAAGACACAGTTTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073857.6

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