Pregenerated sensors for TGIF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062175Ensembl transcript IDs: ENSMUST00000073352.10, ENSMUST00000081335.13, ENSMUST00000150078.2
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACCATGCCTGGCTCTGGTGCCTTGGTCTCCTCGGAGAGGACGCTTaGAGGAATGGCACTCAGCAGAGTACAGGCCCCGTAACAGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: HHAWLWCLGLLGEDA*RNGTQQSTGPVTVQ Trigger: CTGCACTGTTACGGGGCCTGTACTCTGCTGAGTGCCATTCCTTCAAGCGTCCTCTCCGAGGAGACCAAGGCACCAGAGCCAGGCATGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR TCA 90 bp | GAAGCCATGTTCCCTTCCCAGCAGTGCCTCAGGGTGACAGAGAGTTaGGCCTGCTGGGTCTCCTACAGGACAGGAAGCCAGAGGGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: EAMFPSQQCLRVTES*ACWVSYRTGSQREA Trigger: TGCCTCCCTCTGGCTTCCTGTCCTGTAGGAGACCCAGCAGGCTCAACTCTCTGTCACCCTGAGGCACTGCTGGGAAGGGAACATGGCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR CCA 90 bp | CTCTCTGGAGGAGCAGCAGCAACACCATGCCTGGCTCTGGTGCCTTaGTCTCCTCGGAGAGGACGCTTGAAGGAATGGCACTCAGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: LSGGAAATPCLALVP*SPRRGRLKEWHSAE Trigger: CTCTGCTGAGTGCCATTCCTTCAAGCGTCCTCTCCGAGGAGACCAAGGCACCAGAGCCAGGCATGGTGTTGCTGCTGCTCCTCCAGAGAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR CCA 90 bp | TATGGAAGCCTGCTAAGCCTCAGGGGCTCCCTGGAAAGGCCAGAGTaGTCTCTGCCTTCCTCGGAACAGGCACTCCAAGCCAGTCAACAT | + |
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Preference number: 1 (lower is better) Translates to: YGSLLSLRGSLERPE*SLPSSEQALQASQH Trigger: ATGTTGACTGGCTTGGAGTGCCTGTTCCGAGGAAGGCAGAGACCACTCTGGCCTTTCCAGGGAGCCCCTGAGGCTTAGCAGGCTTCCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR TCA 90 bp | ACAAAGTCAATGAAGCCATGTTCCCTTCCCAGCAGTGCCTCAGGGTaGCAGAGAGTTGAGCCTGCTGGGTCTCCTACAGGACAGGAAGCC | + |
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Preference number: 1 (lower is better) Translates to: TKSMKPCSLPSSASG*QRVEPAGSPTGQEA Trigger: GGCTTCCTGTCCTGTAGGAGACCCAGCAGGCTCAACTCTCTGTCACCCTGAGGCACTGCTGGGAAGGGAACATGGCTTCATTGACTTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR TCA 90 bp | GTCTCACAGACAGGTGGGGTAGCAGTGGGCAAACCACAAAGTCAATaGAGCCATGTTCCCTTCCCAGCAGTGCCTCAGGGTGACAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: VSQTGGVAVGKPQSQ*SHVPFPAVPQGDRE Trigger: CTCTCTGTCACCCTGAGGCACTGCTGGGAAGGGAACATGGCTTCATTGACTTTGTGGTTTGCCCACTGCTACCCCACCTGTCTGTGAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR TCA 90 bp | TCCTCTAATCCCAGCACCCTGGAGGCAGAGGCAGGTAGATCTTTGTaGATTGCAGGCCAGAGGCCTGAGGCCAGTCTGGTCATCCTCATA | + |
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Preference number: 1 (lower is better) Translates to: SSNPSTLEAEAGRSL*IAGQRPEASLVILI Trigger: TATGAGGATGACCAGACTGGCCTCAGGCCTCTGGCCTGCAATTCACAAAGATCTACCTGCCTCTGCCTCCAGGGTGCTGGGATTAGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150078.2 |
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| 3UTR TCA 90 bp | CAGTGCAGCGCAGCGACATCCGCTGAGGACTGGACAGAATGGTCCTaGTGCTTGGCAGTGATCCGTACTTGGATAACCCTCTGCATGAAA | + |
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Preference number: 1 (lower is better) Translates to: QCSAATSAEDWTEWS*CLAVIRTWITLCMK Trigger: TTTCATGCAGAGGGTTATCCAAGTACGGATCACTGCCAAGCATCAGGACCATTCTGTCCAGTCCTCAGCGGATGTCGCTGCGCTGCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR CCA 90 bp | CTAGTTCATTTAATGTTCTTCCTTTGGGGCAGCAGTGTAGCTTGGTaGGAGAGCTTGGAAATGTCCTCTAATCCCAGCACCCTGGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: LVHLMFFLWGSSVAW*ESLEMSSNPSTLEA Trigger: TGCCTCCAGGGTGCTGGGATTAGAGGACATTTCCAAGCTCTCCCACCAAGCTACACTGCTGCCCCAAAGGAAGAACATTAAATGAACTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150078.2 |
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| 3UTR TCA 90 bp | ACACGTGTGCCTCTGGTTTTGTCATCTGTCTCTGCTGTGTCTAAATaGCCGTCTGGTGCAAATAACCCACCACCTGTGGATATTTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: TRVPLVLSSVSAVSK*PSGANNPPPVDIFL Trigger: AAGGAAAATATCCACAGGTGGTGGGTTATTTGCACCAGACGGTCATTTAGACACAGCAGAGACAGATGACAAAACCAGAGGCACACGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR GCA 90 bp | TTAAACAACCACTCTAGTCTGAACTCAGCACCACTGCAGAGAATCTaGTGGTCCCTATACAACCATCCTGTGGGAAGTAGATTACCCACT | + |
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Preference number: 1 (lower is better) Translates to: LNNHSSLNSAPLQRI*WSLYNHPVGSRLPT Trigger: AGTGGGTAATCTACTTCCCACAGGATGGTTGTATAGGGACCAGCAGATTCTCTGCAGTGGTGCTGAGTTCAGACTAGAGTGGTTGTTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR CCA 90 bp | CCGGGAAATTTAGGCAGGCCCTTGCAATCCCACCCTGAAGGGAGGTGGGCCAGTCTGGCTCTGGTGCCTTaGTCTCCTCGGAGAGGACGC | + |
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Preference number: 2 (lower is better) Translates to: PGNLGRPLQSHPEGRWASLALVP*SPRRGR Trigger: GCGTCCTCTCCGAGGAGACCAAGGCACCAGAGCCAG...ACTGGCCCACCTCCCTTCAGGGTGGGATTGCAAGGGCCTGCCTAAATTTCCCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR TCA 90 bp | GAGGTATGGAAGCCTGCTAAGCCTCAGGGGCTCCCTGGAAAGGCCAGAGTGGTCGTGCTCACACCCGGGTaGACCTCAGACCACAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: EVWKPAKPQGLPGKARVVVLTPG*TSDHSQ Trigger: CTGACTGTGGTCTGAGGTTCACCCGGGTGTGAGCAC...GACCACTCTGGCCTTTCCAGGGAGCCCCTGAGGCTTAGCAGGCTTCCATACCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR CAA 90 bp | GCTCTCTGGAGGAGCAGCAGCAACACCATGCCTGGCTCTGGTGCCTaGGTCTCCTCGGAGAGGACGCTTGAAGGAATGGCACTCAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: ALWRSSSNTMPGSGA*VSSERTLEGMALSR Trigger: TCTGCTGAGTGCCATTCCTTCAAGCGTCCTCTCCGAGGAGACCAAGGCACCAGAGCCAGGCATGGTGTTGCTGCTGCTCCTCCAGAGAGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR TCA 90 bp | TTAGCATCCTACAGCCATCATGGGGTCTCACAGACAGGTGGGGTAGCAGTGGGCCTTGCAATCCCACCCTaGAGGGAGGTGGGCCAGTCG | + |
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Preference number: 2 (lower is better) Translates to: LASYSHHGVSQTGGVAVGLAIPP*REVGQS Trigger: CGACTGGCCCACCTCCCTTCAGGGTGGGATTGCAAG...GCCCACTGCTACCCCACCTGTCTGTGAGACCCCATGATGGCTGTAGGATGCTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR GCA 90 bp | GAGGTATGGAAGCCTGCTAAGCCTCAGGGGCTCCCTGGAAAGGCCAGAGTGGTCCTCTCCCCACACCTGTaGTTCTGGGCTACCTACTGC | + |
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Preference number: 2 (lower is better) Translates to: EVWKPAKPQGLPGKARVVLSPHL*FWATYC Trigger: GCAGTAGGTAGCCCAGAAGCACAGGTGTGGGGAGAG...GACCACTCTGGCCTTTCCAGGGAGCCCCTGAGGCTTAGCAGGCTTCCATACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR CCA 90 bp | CCCGCCTTAGCATCCTACAGCCATCATGGGGTCTCACAGACAGGTGGGGTAGCACACCATGCCTGGCTCTaGTGCCTTGGTCTCCTCGGA | + |
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Preference number: 2 (lower is better) Translates to: PALASYSHHGVSQTGGVAHHAWL*CLGLLG Trigger: TCCGAGGAGACCAAGGCACCAGAGCCAGGCATGGTG...TGCTACCCCACCTGTCTGTGAGACCCCATGATGGCTGTAGGATGCTAAGGCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR CCA 90 bp | CCGGGAAATTTAGGCAGGCCCTTGCAATCCCACCCTGAAGGGAGGTGGGCCAGTCAGCAACACCATGCCTaGCTCTGGTGCCTTGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: PGNLGRPLQSHPEGRWASQQHHA*LWCLGL Trigger: GAGACCAAGGCACCAGAGCCAGGCATGGTGTTGCTG...ACTGGCCCACCTCCCTTCAGGGTGGGATTGCAAGGGCCTGCCTAAATTTCCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR TCA 90 bp | CAGGAGAGGTATGGAAGCCTGCTAAGCCTCAGGGGCTCCCTGGAAAGGCCAGAGTGCATGAAAGGGCAGTaGGCCAGGAACCTCAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: QERYGSLLSLRGSLERPECMKGQ*ARNLKP Trigger: TGGCTTGAGGTTCCTGGCTCACTGCCCTTTCATGCA...CTCTGGCCTTTCCAGGGAGCCCCTGAGGCTTAGCAGGCTTCCATACCTCTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR TCA 90 bp | TTAGCATCCTACAGCCATCATGGGGTCTCACAGACAGGTGGGGTAGCAGTGGGCCGCAGCGACATCCGCTaGGGACTGGACAGAATGGTC | + |
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Preference number: 2 (lower is better) Translates to: LASYSHHGVSQTGGVAVGRSDIR*GLDRMV Trigger: GACCATTCTGTCCAGTCCTCAGCGGATGTCGCTGCG...GCCCACTGCTACCCCACCTGTCTGTGAGACCCCATGATGGCTGTAGGATGCTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR GCA 90 bp | CTCTCCTCCAGGAAGGTTCCAGCTGCCTCTGTGAACAAGCAGCTTTCCGAAGGGGAAAGCAGGCTGGAGTaGAGGTGTCCCAGGGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: LSSRKVPAASVNKQLSEGESRLE*RCPRAL Trigger: GAGAGCCCTGGGACACCTGCACTCCAGCCTGCTTTC...CCCTTCGGAAAGCTGCTTGTTCACAGAGGCAGCTGGAACCTTCCTGGAGGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR CCA 90 bp | CCAAGTGTGGTCTGTTTCCCCGGGAAATTTAGGCAGGCCCTTGCAATCCCACCCTGTCCCAGGGCTCTCTaGAGGAGCAGCAGCAACACC | + |
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Preference number: 2 (lower is better) Translates to: PSVVCFPGKFRQALAIPPCPRAL*RSSSNT Trigger: GGTGTTGCTGCTGCTCCTCCAGAGAGCCCTGGGACA...GGGTGGGATTGCAAGGGCCTGCCTAAATTTCCCGGGGAAACAGACCACACTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR TCA 90 bp | GCTTGGAAATGTCCTCTAATCCCAGCACCCTGGAGGCAGAGGCAGGTAGATCTTTGCAGGCCAGAGGCCTaGGGCCAGTCTGGTCATCCT | + |
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Preference number: 2 (lower is better) Translates to: AWKCPLIPAPWRQRQVDLCRPEA*GQSGHP Trigger: AGGATGACCAGACTGGCCTCAGGCCTCTGGCCTGCA...AAGATCTACCTGCCTCTGCCTCCAGGGTGCTGGGATTAGAGGACATTTCCAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150078.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGCATCCTACAGCCATCATGGGGTCTCACAGACAGGTGGGGTAGCAGTGGGCACCCACCGTGTAAGGTaGTCTCTCCCCACACCTGTG | + |
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Preference number: 2 (lower is better) Translates to: LASYSHHGVSQTGGVAVGTHRVR*SLPTPV Trigger: CACAGGTGTGGGGAGAGAGCACCTTACACGGTGGGT...GCCCACTGCTACCCCACCTGTCTGTGAGACCCCATGATGGCTGTAGGATGCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR CCA 90 bp | AGAGACCGCTCTACCTTTCTGATGCCCTGTTTTATCCCAGGAGGGGGAATGCCACTGGCTCTGGTGCCTTaGTCTCCTCGGAGAGGACGC | + |
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Preference number: 2 (lower is better) Translates to: RDRSTFLMPCFIPGGGMPLALVP*SPRRGR Trigger: GCGTCCTCTCCGAGGAGACCAAGGCACCAGAGCCAG...TGGCATTCCCCCTCCTGGGATAAAACAGGGCATCAGAAAGGTAGAGCGGTCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR CCA 90 bp | GAGGTATGGAAGCCTGCTAAGCCTCAGGGGCTCCCTGGAAAGGCCAGAGTGGTCCCACACCTGTGCTTCTaGGCTACCTACTGCATTAAC | + |
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Preference number: 2 (lower is better) Translates to: EVWKPAKPQGLPGKARVVPHLCF*ATYCIN Trigger: GTTAATGCAGTAGGTAGCCCAGAAGCACAGGTGTGG...GACCACTCTGGCCTTTCCAGGGAGCCCCTGAGGCTTAGCAGGCTTCCATACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR CCA 90 bp | TTAGCATCCTACAGCCATCATGGGGTCTCACAGACAGGTGGGGTAGCAGTGGGCAACAAGCTACAAAGGTaGTGCAGGGTGGGGGTCGCT | + |
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Preference number: 2 (lower is better) Translates to: LASYSHHGVSQTGGVAVGNKLQR*CRVGVA Trigger: AGCGACCCCCACCCTGCACCACCTTTGTAGCTTGTT...GCCCACTGCTACCCCACCTGTCTGTGAGACCCCATGATGGCTGTAGGATGCTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR GCA 90 bp | CCGGGAAATTTAGGCAGGCCCTTGCAATCCCACCCTGAAGGGAGGTGGGCCAGTTTCTGGGCTACCTACTaGATTAACACAAACCACAGC | + |
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Preference number: 2 (lower is better) Translates to: PGNLGRPLQSHPEGRWASFWATY*INTNHS Trigger: GCTGTGGTTTGTGTTAATGCAGTAGGTAGCCCAGAA...ACTGGCCCACCTCCCTTCAGGGTGGGATTGCAAGGGCCTGCCTAAATTTCCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR CCA 90 bp | TCTGAACTCAGCACCACTGCAGAGAATCTGCTGGTCCCTATACAACCATCCTGTTGTCCCAGGGCTCTCTaGAGGAGCAGCAGCAACACC | + |
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Preference number: 2 (lower is better) Translates to: SELSTTAENLLVPIQPSCCPRAL*RSSSNT Trigger: GGTGTTGCTGCTGCTCCTCCAGAGAGCCCTGGGACA...ACAGGATGGTTGTATAGGGACCAGCAGATTCTCTGCAGTGGTGCTGAGTTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR TCA 90 bp | CTGAACTCAGCACCACTGCAGAGAATCTGCTGGTCCCTATACAACCATCCTGTGTGGACAGAATGGTCCTaGTGCTTGGCAGTGATCCGT | + |
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Preference number: 2 (lower is better) Translates to: LNSAPLQRICWSLYNHPVWTEWS*CLAVIR Trigger: ACGGATCACTGCCAAGCATCAGGACCATTCTGTCCA...CACAGGATGGTTGTATAGGGACCAGCAGATTCTCTGCAGTGGTGCTGAGTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR CCA 90 bp | CTGAACTCAGCACCACTGCAGAGAATCTGCTGGTCCCTATACAACCATCCTGTGGGACGCTTGAAGGAATaGCACTCAGCAGAGTACAGG | + |
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Preference number: 2 (lower is better) Translates to: LNSAPLQRICWSLYNHPVGRLKE*HSAEYR Trigger: CCTGTACTCTGCTGAGTGCCATTCCTTCAAGCGTCC...CACAGGATGGTTGTATAGGGACCAGCAGATTCTCTGCAGTGGTGCTGAGTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR CCA 90 bp | AGAGACCGCTCTACCTTTCTGATGCCCTGTTTTATCCCAGGAGGGGGAATGCCACCACACCTGTGCTTCTaGGCTACCTACTGCATTAAC | + |
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Preference number: 2 (lower is better) Translates to: RDRSTFLMPCFIPGGGMPPHLCF*ATYCIN Trigger: GTTAATGCAGTAGGTAGCCCAGAAGCACAGGTGTGG...TGGCATTCCCCCTCCTGGGATAAAACAGGGCATCAGAAAGGTAGAGCGGTCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR CCA 90 bp | CCGGGAAATTTAGGCAGGCCCTTGCAATCCCACCCTGAAGGGAGGTGGGCCAGTATAACCCACCACCTGTaGATATTTTCCTTCTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: PGNLGRPLQSHPEGRWASITHHL*IFSFCL Trigger: AAGACAGAAGGAAAATATCCACAGGTGGTGGGTTAT...ACTGGCCCACCTCCCTTCAGGGTGGGATTGCAAGGGCCTGCCTAAATTTCCCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR CCA 90 bp | CAGGAGAGGTATGGAAGCCTGCTAAGCCTCAGGGGCTCCCTGGAAAGGCCAGAGGCTCCTCACATCTTCTaGTTATTCAGAACACAAGTA | + |
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Preference number: 2 (lower is better) Translates to: QERYGSLLSLRGSLERPEAPHIF*LFRTQV Trigger: TACTTGTGTTCTGAATAACCAGAAGATGTGAGGAGC...CTCTGGCCTTTCCAGGGAGCCCCTGAGGCTTAGCAGGCTTCCATACCTCTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR TCA 90 bp | CGGAACAGGCACTCCAAGCCAGTCAACATCCAAGAGCCCCGTCTGTGCTCACACGGGGTATACTGTTGCTaGAAACTAAGCAAAGTAAAC | + |
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Preference number: 2 (lower is better) Translates to: RNRHSKPVNIQEPRLCSHGVYCC*KLSKVN Trigger: GTTTACTTTGCTTAGTTTTCAGCAACAGTATACCCC...GTGTGAGCACAGACGGGGCTCTTGGATGTTGACTGGCTTGGAGTGCCTGTTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR CCA 90 bp | TCTGAACTCAGCACCACTGCAGAGAATCTGCTGGTCCCTATACAACCATCCTGTGGACGCTTGAAGGAATaGCACTCAGCAGAGTACAGG | + |
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Preference number: 2 (lower is better) Translates to: SELSTTAENLLVPIQPSCGRLKE*HSAEYR Trigger: CCTGTACTCTGCTGAGTGCCATTCCTTCAAGCGTCC...ACAGGATGGTTGTATAGGGACCAGCAGATTCTCTGCAGTGGTGCTGAGTTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR CCA 90 bp | CCCGCCTTAGCATCCTACAGCCATCATGGGGTCTCACAGACAGGTGGGGTAGCAATAACCCACCACCTGTaGATATTTTCCTTCTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: PALASYSHHGVSQTGGVAITHHL*IFSFCL Trigger: AAGACAGAAGGAAAATATCCACAGGTGGTGGGTTAT...TGCTACCCCACCTGTCTGTGAGACCCCATGATGGCTGTAGGATGCTAAGGCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR CCA 90 bp | GGAAGACCAAACCAAGAATTAAACAACCACTCTAGTCTGAACTCAGCACCACTGCAGCAACACCATGCCTaGCTCTGGTGCCTTGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: GRPNQELNNHSSLNSAPLQQHHA*LWCLGL Trigger: GAGACCAAGGCACCAGAGCCAGGCATGGTGTTGCTG...CAGTGGTGCTGAGTTCAGACTAGAGTGGTTGTTTAATTCTTGGTTTGGTCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR GCA 90 bp | GAGTTACTCAGAACAGAGAGAAAAACAGAGCTGTTTCACTCTAGCTTAACCACGCTCTCCCCACACCTGTaGTTCTGGGCTACCTACTGC | + |
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Preference number: 2 (lower is better) Translates to: ELLRTERKTELFHSSLTTLSPHL*FWATYC Trigger: GCAGTAGGTAGCCCAGAAGCACAGGTGTGGGGAGAG...CGTGGTTAAGCTAGAGTGAAACAGCTCTGTTTTTCTCTCTGTTCTGAGTAACTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR CCA 90 bp | AGAGACCGCTCTACCTTTCTGATGCCCTGTTTTATCCCAGGAGGGGGAATGCCATTCTGTGACATCTGCTaGGCATTTCCTTTGTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: RDRSTFLMPCFIPGGGMPFCDIC*AFPLSF Trigger: AAAGGACAAAGGAAATGCCCAGCAGATGTCACAGAA...TGGCATTCCCCCTCCTGGGATAAAACAGGGCATCAGAAAGGTAGAGCGGTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR TCA 90 bp | GAGTTACTCAGAACAGAGAGAAAAACAGAGCTGTTTCACTCTAGCTTAACCACGTGGACAGAATGGTCCTaGTGCTTGGCAGTGATCCGT | + |
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Preference number: 2 (lower is better) Translates to: ELLRTERKTELFHSSLTTWTEWS*CLAVIR Trigger: ACGGATCACTGCCAAGCATCAGGACCATTCTGTCCA...CGTGGTTAAGCTAGAGTGAAACAGCTCTGTTTTTCTCTCTGTTCTGAGTAACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR CCA 90 bp | TCTGAACTCAGCACCACTGCAGAGAATCTGCTGGTCCCTATACAACCATCCTGTTTCTGTGACATCTGCTaGGCATTTCCTTTGTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: SELSTTAENLLVPIQPSCFCDIC*AFPLSF Trigger: AAAGGACAAAGGAAATGCCCAGCAGATGTCACAGAA...ACAGGATGGTTGTATAGGGACCAGCAGATTCTCTGCAGTGGTGCTGAGTTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR-3UTR TCA 90 bp | TCCCCACACCTGTGCTTCTGGGCTACCTACTGCATTAACACAAACCACAGCAAAATTTCCTTTGTCCTTTaGATAGGTTGGAATGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: SPHLCFWATYCINTNHSKISFVL*IGWNVH Trigger: GTGCACATTCCAACCTATTCAAAGGACAAAGGAAAT...TTTGCTGTGGTTTGTGTTAATGCAGTAGGTAGCCCAGAAGCACAGGTGTGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR TCA 72 bp | CCCGGGAAATTTAGGCAGGCCCTTGCAATCCCACCCTaGAGGGAGGTGGGCCAGTCGGTAGCCTCAGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PGKFRQALAIPP*REVGQSVASAA Trigger: GGCTGCTGAGGCTACCGACTGGCCCACCTCCCTTCAGGGTGGGATTGCAAGGGCCTGCCTAAATTTCCCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR GCA 72 bp | GTCCCAGGGCTCTCTGGAGGAGCAGCAGCAACACCATaGCTGGCTCTGGTGCCTTGGTCTCCTCGGAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VPGLSGGAAATP*LALVPWSPRRG Trigger: TCCTCTCCGAGGAGACCAAGGCACCAGAGCCAGGCATGGTGTTGCTGCTGCTCCTCCAGAGAGCCCTGGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR CCA 72 bp | CAGGGCTCTCTGGAGGAGCAGCAGCAACACCATGCCTaGCTCTGGTGCCTTGGTCTCCTCGGAGAGGACGCT | + |
|
Preference number: 3 (lower is better) Translates to: QGSLEEQQQHHA*LWCLGLLGEDA Trigger: AGCGTCCTCTCCGAGGAGACCAAGGCACCAGAGCCAGGCATGGTGTTGCTGCTGCTCCTCCAGAGAGCCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR GCA 72 bp | GCCTCAGGGGCTCCCTGGAAAGGCCAGAGTGGTCTCTaGCTTCCTCGGAACAGGCACTCCAAGCCAGTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: ASGAPWKGQSGL*LPRNRHSKPVN Trigger: GTTGACTGGCTTGGAGTGCCTGTTCCGAGGAAGGCAGAGACCACTCTGGCCTTTCCAGGGAGCCCCTGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR CCA 72 bp | GAAAGCAGGCTGGAGTGCAGGTGTCCCAGGGCTCTCTaGAGGAGCAGCAGCAACACCATGCCTGGCTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: ESRLECRCPRAL*RSSSNTMPGSG Trigger: ACCAGAGCCAGGCATGGTGTTGCTGCTGCTCCTCCAGAGAGCCCTGGGACACCTGCACTCCAGCCTGCTTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR CCA 72 bp | CTGCTAAGCCTCAGGGGCTCCCTGGAAAGGCCAGAGTaGTCTCTGCCTTCCTCGGAACAGGCACTCCAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LLSLRGSLERPE*SLPSSEQALQA Trigger: GGCTTGGAGTGCCTGTTCCGAGGAAGGCAGAGACCACTCTGGCCTTTCCAGGGAGCCCCTGAGGCTTAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR TCA 72 bp | ACAGGCCCCGTAACAGTGCAGCGCAGCGACATCCGCTaGGGACTGGACAGAATGGTCCTGATGCTTGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: TGPVTVQRSDIR*GLDRMVLMLGS Trigger: ACTGCCAAGCATCAGGACCATTCTGTCCAGTCCTCAGCGGATGTCGCTGCGCTGCACTGTTACGGGGCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR TCA 72 bp | TGGCTCTGGTGCCTTGGTCTCCTCGGAGAGGACGCTTaGAGGAATGGCACTCAGCAGAGTACAGGCCCCGTA | + |
|
Preference number: 3 (lower is better) Translates to: WLWCLGLLGEDA*RNGTQQSTGPV Trigger: TACGGGGCCTGTACTCTGCTGAGTGCCATTCCTTCAAGCGTCCTCTCCGAGGAGACCAAGGCACCAGAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR TCA 72 bp | TTCCCTTCCCAGCAGTGCCTCAGGGTGACAGAGAGTTaGGCCTGCTGGGTCTCCTACAGGACAGGAAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: FPSQQCLRVTES*ACWVSYRTGSQ Trigger: CTGGCTTCCTGTCCTGTAGGAGACCCAGCAGGCTCAACTCTCTGTCACCCTGAGGCACTGCTGGGAAGGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR GCA 72 bp | CACTCCAAGCCAGTCAACATCCAAGAGCCCCGTCTGTaGTCACACCCGGGTGAACCTCAGACCACAGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: HSKPVNIQEPRL*SHPGEPQTTVR Trigger: CCTGACTGTGGTCTGAGGTTCACCCGGGTGTGAGCACAGACGGGGCTCTTGGATGTTGACTGGCTTGGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR TCA 72 bp | ATCCGTACTTGGATAACCCTCTGCATGAAAGGGCAGTaGGCCAGGAACCTCAAGCCACCCGGGAGCAGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: IRTWITLCMKGQ*ARNLKPPGSRC Trigger: GCACCTGCTCCCGGGTGGCTTGAGGTTCCTGGCTCACTGCCCTTTCATGCAGAGGGTTATCCAAGTACGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR TCA 72 bp | TTGGACCCAGCTCAAGTCTGGACTTGGCAGCTTTCCTaGGCCTGCCTAGGAAAGCAGGCTGGAGTGCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LDPAQVWTWQLS*ACLGKQAGVQV Trigger: CACCTGCACTCCAGCCTGCTTTCCTAGGCAGGCTCAGGAAAGCTGCCAAGTCCAGACTTGAGCTGGGTCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR TCA 72 bp | CAACATCCAAGAGCCCCGTCTGTGCTCACACCCGGGTaGACCTCAGACCACAGTCAGGGCTCCTCACATCTT | + |
|
Preference number: 3 (lower is better) Translates to: QHPRAPSVLTPG*TSDHSQGSSHL Trigger: AAGATGTGAGGAGCCCTGACTGTGGTCTGAGGTTCACCCGGGTGTGAGCACAGACGGGGCTCTTGGATGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR CCA 72 bp | TGGCTCGACCAAAAGAGGCACAGCTTAGGGGCGGCTTaGACCCAGCTCAAGTCTGGACTTGGCAGCTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: WLDQKRHSLGAA*TQLKSGLGSFP Trigger: AGGAAAGCTGCCAAGTCCAGACTTGAGCTGGGTCCAAGCCGCCCCTAAGCTGTGCCTCTTTTGGTCGAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR-3UTR CAA 90 bp | CGGAACAGGCACTCCAAGCCAGTCAACATCCAAGAGCCCCGTCTGTGCTCACACCGTGTGCCTCTGGTTTaGTCATCTGTCTCTGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: RNRHSKPVNIQEPRLCSHRVPLV*SSVSAV Trigger: CACAGCAGAGACAGATGACAAAACCAGAGGCACACG...GTGTGAGCACAGACGGGGCTCTTGGATGTTGACTGGCTTGGAGTGCCTGTTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR TCA 72 bp | GCCATTCTCGCGCCCACTTGCACAGCAAGGGATGGGTaGAGTCACTCAGGAGAGGTATGGAAGCCTGCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: AILAPTCTARDG*SHSGEVWKPAK Trigger: CTTAGCAGGCTTCCATACCTCTCCTGAGTGACTTCACCCATCCCTTGCTGTGCAAGTGGGCGCGAGAATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR TCA 72 bp | ATGAAGCCATGTTCCCTTCCCAGCAGTGCCTCAGGGTaGCAGAGAGTTGAGCCTGCTGGGTCTCCTACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: MKPCSLPSSASG*QRVEPAGSPTG Trigger: TCCTGTAGGAGACCCAGCAGGCTCAACTCTCTGTCACCCTGAGGCACTGCTGGGAAGGGAACATGGCTTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR GCA 72 bp | ATTACCCACTTACCGAGCTCCACCCACCGTGTAAGGTaGTCTCTCCCCACACCTGTGCTTCTGGGCTACCTA | + |
|
Preference number: 3 (lower is better) Translates to: ITHLPSSTHRVR*SLPTPVLLGYL Trigger: TAGGTAGCCCAGAAGCACAGGTGTGGGGAGAGAGCACCTTACACGGTGGGTGGAGCTCGGTAAGTGGGTAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR CCA 72 bp | CATGGCTCCCTCCCTCCTCCCTTGCTCAGTGCACTGTaGGGGGAAAAGAAATCCCTCATCCTAGTATCACCC | + |
|
Preference number: 3 (lower is better) Translates to: HGSLPPPLLSAL*GEKKSLILVSP Trigger: GGGTGATACTAGGATGAGGGATTTCTTTTCCCCCCACAGTGCACTGAGCAAGGGAGGAGGGAGGGAGCCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR-3UTR CAA 90 bp | GAGGTATGGAAGCCTGCTAAGCCTCAGGGGCTCCCTGGAAAGGCCAGAGTGGTCTGTCCTTTGAATAGGTaGGAATGTGCACACCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: EVWKPAKPQGLPGKARVVCPLNR*ECAHLA Trigger: AGCCAGGTGTGCACATTCCAACCTATTCAAAGGACA...GACCACTCTGGCCTTTCCAGGGAGCCCCTGAGGCTTAGCAGGCTTCCATACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR TCA 72 bp | GCAGCGACATCCGCTGAGGACTGGACAGAATGGTCCTaGTGCTTGGCAGTGATCCGTACTTGGATAACCCTC | + |
|
Preference number: 3 (lower is better) Translates to: AATSAEDWTEWS*CLAVIRTWITL Trigger: GAGGGTTATCCAAGTACGGATCACTGCCAAGCATCAGGACCATTCTGTCCAGTCCTCAGCGGATGTCGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR TCA 72 bp | ACAGGTGGGGTAGCAGTGGGCAAACCACAAAGTCAATaGAGCCATGTTCCCTTCCCAGCAGTGCCTCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TGGVAVGKPQSQ*SHVPFPAVPQG Trigger: ACCCTGAGGCACTGCTGGGAAGGGAACATGGCTTCATTGACTTTGTGGTTTGCCCACTGCTACCCCACCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR CCA 72 bp | AATAGCCATTCTCGCGCCCACTTGCACAGCAAGGGATaGGTGAAGTCACTCAGGAGAGGTATGGAAGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: NSHSRAHLHSKG*VKSLRRGMEAC Trigger: GCAGGCTTCCATACCTCTCCTGAGTGACTTCACCCATCCCTTGCTGTGCAAGTGGGCGCGAGAATGGCTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR CCA 72 bp | AGCATCCTACAGCCATCATGGGGTCTCACAGACAGGTaGGGTAGCAGTGGGCAAACCACAAAGTCAATGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SILQPSWGLTDR*GSSGQTTKSMK Trigger: CTTCATTGACTTTGTGGTTTGCCCACTGCTACCCCACCTGTCTGTGAGACCCCATGATGGCTGTAGGATGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR-3UTR CAA 90 bp | GAGGTATGGAAGCCTGCTAAGCCTCAGGGGCTCCCTGGAAAGGCCAGAGTGGTCAGATGGGGTATACTGTaGCTGAAAACTAAGCAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: EVWKPAKPQGLPGKARVVRWGIL*LKTKQS Trigger: ACTTTGCTTAGTTTTCAGCAACAGTATACCCCATCT...GACCACTCTGGCCTTTCCAGGGAGCCCCTGAGGCTTAGCAGGCTTCCATACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR-3UTR CAA 90 bp | AGAGACCGCTCTACCTTTCTGATGCCCTGTTTTATCCCAGGAGGGGGAATGCCATGTCCTTTGAATAGGTaGGAATGTGCACACCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RDRSTFLMPCFIPGGGMPCPLNR*ECAHLA Trigger: AGCCAGGTGTGCACATTCCAACCTATTCAAAGGACA...TGGCATTCCCCCTCCTGGGATAAAACAGGGCATCAGAAAGGTAGAGCGGTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR GCA 72 bp | CACTCTAGTCTGAACTCAGCACCACTGCAGAGAATCTaGTGGTCCCTATACAACCATCCTGTGGGAAGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: HSSLNSAPLQRI*WSLYNHPVGSR Trigger: TCTACTTCCCACAGGATGGTTGTATAGGGACCAGCAGATTCTCTGCAGTGGTGCTGAGTTCAGACTAGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR CCA 72 bp | TTAATGTTCTTCCTTTGGGGCAGCAGTGTAGCTTGGTaGGAGAGCTTGGAAATGTCCTCTAATCCCAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: LMFFLWGSSVAW*ESLEMSSNPST Trigger: GGTGCTGGGATTAGAGGACATTTCCAAGCTCTCCCACCAAGCTACACTGCTGCCCCAAAGGAAGAACATTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150078.2 |
||
| 3UTR TCA 72 bp | CCTCTGGTTTTGTCATCTGTCTCTGCTGTGTCTAAATaGCCGTCTGGTGCAAATAACCCACCACCTGTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: PLVLSSVSAVSK*PSGANNPPPVD Trigger: ATCCACAGGTGGTGGGTTATTTGCACCAGACGGTCATTTAGACACAGCAGAGACAGATGACAAAACCAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR CCA 72 bp | CATTTAATGTTCTTCCTTTGGGGCAGCAGTGTAGCTTaGTGGGAGAGCTTGGAAATGTCCTCTAATCCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: HLMFFLWGSSVA*WESLEMSSNPS Trigger: GCTGGGATTAGAGGACATTTCCAAGCTCTCCCACCAAGCTACACTGCTGCCCCAAAGGAAGAACATTAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150078.2 |
||
| 3UTR CCA 72 bp | TCTAGTCTGAACTCAGCACCACTGCAGAGAATCTGCTaGTCCCTATACAACCATCCTGTGGGAAGTAGATTA | + |
|
Preference number: 3 (lower is better) Translates to: SSLNSAPLQRIC*SLYNHPVGSRL Trigger: TAATCTACTTCCCACAGGATGGTTGTATAGGGACCAGCAGATTCTCTGCAGTGGTGCTGAGTTCAGACTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR-3UTR CAA 90 bp | TCCCCACACCTGTGCTTCTGGGCTACCTACTGCATTAACACAAACCACAGCAAACATTTCCTTTGTCCTTaGAATAGGTTGGAATGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SPHLCFWATYCINTNHSKHFLCP*NRLECA Trigger: TGCACATTCCAACCTATTCAAAGGACAAAGGAAATG...TTTGCTGTGGTTTGTGTTAATGCAGTAGGTAGCCCAGAAGCACAGGTGTGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGACCAAACCAAGAATTAAACAACCACTCTAGTCTGAACTCAGCACCACTGCATTTCCTTTGTCCTTaGAATAGGTTGGAATGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: GRPNQELNNHSSLNSAPLHFLCP*NRLECA Trigger: TGCACATTCCAACCTATTCAAAGGACAAAGGAAATG...CAGTGGTGCTGAGTTCAGACTAGAGTGGTTGTTTAATTCTTGGTTTGGTCTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| CDS-3UTR TCA 90 bp | CCGGGAAATTTAGGCAGGCCCTTGCAATCCCACCCTGAAGGGAGGTGGGCCAGTTGGGTGGTGGCGTATTaGAGAGTCCACCCGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGNLGRPLQSHPEGRWASWVVAY*RVHPWG Trigger: GCCCCACGGGTGGACTCTTCAATACGCCACCACCCA...ACTGGCCCACCTCCCTTCAGGGTGGGATTGCAAGGGCCTGCCTAAATTTCCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| CDS-3UTR TCA 90 bp | GGTGGGAGAGCTTGGAAATGTCCTCTAATCCCAGCACCCTGGAGGCAGAGGCAGCCTCTTGCCGGTCAGTaGCAGGAGCCCCTCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GGRAWKCPLIPAPWRQRQPLAGQ*QEPLIL Trigger: GAGGATGAGGGGCTCCTGTCACTGACCGGCAAGAGG...CTGCCTCTGCCTCCAGGGTGCTGGGATTAGAGGACATTTCCAAGCTCTCCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150078.2 |
||
| CDS-3UTR GCA 90 bp | CTCTCCTCCAGGAAGGTTCCAGCTGCCTCTGTGAACAAGCAGCTTTCCGAAGGGATCTCGGCAGCCCTCTaGAGCGCCACCTCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSRKVPAASVNKQLSEGISAAL*SATSTS Trigger: GCTGGTGGAGGTGGCGCTGCAGAGGGCTGCCGAGAT...CCCTTCGGAAAGCTGCTTGTTCACAGAGGCAGCTGGAACCTTCCTGGAGGAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| CDS-3UTR TCA 90 bp | CTCTCCTCCAGGAAGGTTCCAGCTGCCTCTGTGAACAAGCAGCTTTCCGAAGGGCCTCTTGCCGGTCAGTaGCAGGAGCCCCTCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSSRKVPAASVNKQLSEGPLAGQ*QEPLIL Trigger: GAGGATGAGGGGCTCCTGTCACTGACCGGCAAGAGG...CCCTTCGGAAAGCTGCTTGTTCACAGAGGCAGCTGGAACCTTCCTGGAGGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| CDS-3UTR TCA 90 bp | GAGGTATGGAAGCCTGCTAAGCCTCAGGGGCTCCCTGGAAAGGCCAGAGTGGTCCCGGAGGATCTTTACTaGCTCCTTGGGCAGGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: EVWKPAKPQGLPGKARVVPEDLY*LLGQVP Trigger: GGGAACCTGCCCAAGGAGTCAGTAAAGATCCTCCGG...GACCACTCTGGCCTTTCCAGGGAGCCCCTGAGGCTTAGCAGGCTTCCATACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| CDS-3UTR CCA 90 bp | CGGAACAGGCACTCCAAGCCAGTCAACATCCAAGAGCCCCGTCTGTGCTCACACGGGTCACCAGGGCCTTaGGGGATTCCAGCTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: RNRHSKPVNIQEPRLCSHGSPGP*GIPAPL Trigger: AAGTGGAGCTGGAATCCCCCAAGGCCCTGGTGACCC...GTGTGAGCACAGACGGGGCTCTTGGATGTTGACTGGCTTGGAGTGCCTGTTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR CAA 72 bp | AGGAGCAGCAGCAACACCATGCCTGGCTCTGGTGCCTaGGTCTCCTCGGAGAGGACGCTTGAAGGAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSSSNTMPGSGA*VSSERTLEGMA Trigger: TGCCATTCCTTCAAGCGTCCTCTCCGAGGAGACCAAGGCACCAGAGCCAGGCATGGTGTTGCTGCTGCTCCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR CAA 72 bp | CTGGCTCGACCAAAAGAGGCACAGCTTAGGGGCGGCTaGGACCCAGCTCAAGTCTGGACTTGGCAGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LARPKEAQLRGG*DPAQVWTWQLS Trigger: GGAAAGCTGCCAAGTCCAGACTTGAGCTGGGTCCAAGCCGCCCCTAAGCTGTGCCTCTTTTGGTCGAGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| 3UTR CAA 72 bp | GCACCCTGGAGGCAGAGGCAGGTAGATCTTTGTGAATaGCAGGCCAGAGGCCTGAGGCCAGTCTGGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: APWRQRQVDLCE*QARGLRPVWSS Trigger: GGATGACCAGACTGGCCTCAGGCCTCTGGCCTGCAATTCACAAAGATCTACCTGCCTCTGCCTCCAGGGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150078.2 |
||
| CDS-3UTR TCA 90 bp | CCCGCCTTAGCATCCTACAGCCATCATGGGGTCTCACAGACAGGTGGGGTAGCACCGGAGGATCTTTACTaGCTCCTTGGGCAGGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PALASYSHHGVSQTGGVAPEDLY*LLGQVP Trigger: GGGAACCTGCCCAAGGAGTCAGTAAAGATCCTCCGG...TGCTACCCCACCTGTCTGTGAGACCCCATGATGGCTGTAGGATGCTAAGGCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| CDS-3UTR GCA 90 bp | TACTTGGATAACCCTCTGCATGAAAGGGCAGTGAGCCAGGAACCTCAAGCCACCATCTCGGCAGCCCTCTaGAGCGCCACCTCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YLDNPLHERAVSQEPQATISAAL*SATSTS Trigger: GCTGGTGGAGGTGGCGCTGCAGAGGGCTGCCGAGAT...GGTGGCTTGAGGTTCCTGGCTCACTGCCCTTTCATGCAGAGGGTTATCCAAGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| CDS-3UTR CCA 90 bp | CAGGAGAGGTATGGAAGCCTGCTAAGCCTCAGGGGCTCCCTGGAAAGGCCAGAGCATGTTAGTGGGGGCTaGAACAGACACAGCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QERYGSLLSLRGSLERPEHVSGG*NRHSQQ Trigger: CTGCTGGCTGTGTCTGTTCCAGCCCCCACTAACATG...CTCTGGCCTTTCCAGGGAGCCCCTGAGGCTTAGCAGGCTTCCATACCTCTCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081335.13 |
||
| CDS-3UTR CCA 90 bp | CAGGAGAGGTATGGAAGCCTGCTAAGCCTCAGGGGCTCCCTGGAAAGGCCAGAGTCACCTTGGCCTGAGTaGAGTGGCATGGAGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: QERYGSLLSLRGSLERPESPWPE*SGMEHT Trigger: TGTGTGCTCCATGCCACTCCACTCAGGCCAAGGTGA...CTCTGGCCTTTCCAGGGAGCCCCTGAGGCTTAGCAGGCTTCCATACCTCTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081335.13 |
||
| CDS-3UTR CCA 90 bp | CCGGGAAATTTAGGCAGGCCCTTGCAATCCCACCCTGAAGGGAGGTGGGCCAGTTTCCAGCTCCACTTGTaGGAAGGGTGCTGCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGNLGRPLQSHPEGRWASFQLHL*EGCCWL Trigger: AAGCCAGCAGCACCCTTCCCACAAGTGGAGCTGGAA...ACTGGCCCACCTCCCTTCAGGGTGGGATTGCAAGGGCCTGCCTAAATTTCCCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| CDS-3UTR CCA 90 bp | GAGGTATGGAAGCCTGCTAAGCCTCAGGGGCTCCCTGGAAAGGCCAGAGTGGTCTCTTTACTGACTCCTTaGGCAGGTTCCCTCTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: EVWKPAKPQGLPGKARVVSLLTP*AGSLCA Trigger: AGCGCAGAGGGAACCTGCCCAAGGAGTCAGTAAAGA...GACCACTCTGGCCTTTCCAGGGAGCCCCTGAGGCTTAGCAGGCTTCCATACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| CDS-3UTR CCA 90 bp | CCAAGTGTGGTCTGTTTCCCCGGGAAATTTAGGCAGGCCCTTGCAATCCCACCCTGGGGGTGTGGGTGGTaGCGTATTGAAGAGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PSVVCFPGKFRQALAIPPWGCGW*RIEEST Trigger: GGTGGACTCTTCAATACGCCACCACCCACACCCCCA...GGGTGGGATTGCAAGGGCCTGCCTAAATTTCCCGGGGAAACAGACCACACTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| CDS-3UTR TCA 90 bp | AAGCTCCAGAATAAATCCGAAACAAGCTACAAAGGTGGTGCAGGGTGGGGGTCGCCTCTTGCCGGTCAGTaGCAGGAGCCCCTCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLQNKSETSYKGGAGWGSPLAGQ*QEPLIL Trigger: GAGGATGAGGGGCTCCTGTCACTGACCGGCAAGAGG...CGACCCCCACCCTGCACCACCTTTGTAGCTTGTTTCGGATTTATTCTGGAGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| CDS-3UTR TCA 90 bp | CTGATGCTTGGCAGTGATCCGTACTTGGATAACCCTCTGCATGAAAGGGCAGTGTGGGTGGTGGCGTATTaGAGAGTCCACCCGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LMLGSDPYLDNPLHERAVWVVAY*RVHPWG Trigger: GCCCCACGGGTGGACTCTTCAATACGCCACCACCCA...CACTGCCCTTTCATGCAGAGGGTTATCCAAGTACGGATCACTGCCAAGCATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| CDS-3UTR TCA 90 bp | GGTTGGAATGTGCACACCTGGCTCGACCAAAAGAGGCACAGCTTAGGGGCGGCTGCAACTGGAAGCTGCTaGAGTCATCCTTGTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GWNVHTWLDQKRHSLGAAATGSC*SHPCPA Trigger: AGCAGGACAAGGATGACTTCAGCAGCTTCCAGTTGC...AGCCGCCCCTAAGCTGTGCCTCTTTTGGTCGAGCCAGGTGTGCACATTCCAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| CDS-3UTR GCA 90 bp | ACCCGGGTGAACCTCAGACCACAGTCAGGGCTCCTCACATCTTCTGGTTATTCATGGGCAGGTTCCCTCTaGGCTTCCTCTTGCCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TRVNLRPQSGLLTSSGYSWAGSL*ASSCRS Trigger: TGACCGGCAAGAGGAAGCGCAGAGGGAACCTGCCCA...TGAATAACCAGAAGATGTGAGGAGCCCTGACTGTGGTCTGAGGTTCACCCGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| CDS-3UTR GCA 90 bp | AGCTTGGAAATGTCCTCTAATCCCAGCACCCTGGAGGCAGAGGCAGGTAGATCTTGGGCAGGTTCCCTCTaGGCTTCCTCTTGCCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLEMSSNPSTLEAEAGRSWAGSL*ASSCRS Trigger: TGACCGGCAAGAGGAAGCGCAGAGGGAACCTGCCCA...AGATCTACCTGCCTCTGCCTCCAGGGTGCTGGGATTAGAGGACATTTCCAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150078.2 |
||
| CDS-3UTR GCA 90 bp | CCAAGTGTGGTCTGTTTCCCCGGGAAATTTAGGCAGGCCCTTGCAATCCCACCCTTGTGGGAAGGGTGCTaGTGGCTTTTCACCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSVVCFPGKFRQALAIPPLWEGC*WLFTLA Trigger: GGCCAAGGTGAAAAGCCAGCAGCACCCTTCCCACAA...GGGTGGGATTGCAAGGGCCTGCCTAAATTTCCCGGGGAAACAGACCACACTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| CDS-3UTR GCA 90 bp | CGGAACAGGCACTCCAAGCCAGTCAACATCCAAGAGCCCCGTCTGTGCTCACACCACTTGTGGGAAGGGTaGTGCTGGCTTTTCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RNRHSKPVNIQEPRLCSHHLWEG*CWLFTL Trigger: CAAGGTGAAAAGCCAGCAGCACCCTTCCCACAAGTG...GTGTGAGCACAGACGGGGCTCTTGGATGTTGACTGGCTTGGAGTGCCTGTTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| CDS-3UTR CCA 90 bp | CCCGCCTTAGCATCCTACAGCCATCATGGGGTCTCACAGACAGGTGGGGTAGCAGCAGCACCGAGAGGTTaGTCTGTCCAGAGAGACTTA | + |
|
Preference number: 4 (lower is better) Translates to: PALASYSHHGVSQTGGVAAAPRG*SVQRDL Trigger: TAAGTCTCTCTGGACAGACCAACCTCTCGGTGCTGC...TGCTACCCCACCTGTCTGTGAGACCCCATGATGGCTGTAGGATGCTAAGGCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| CDS-3UTR CCA 90 bp | ACCCGGGTGAACCTCAGACCACAGTCAGGGCTCCTCACATCTTCTGGTTATTCAGGGTCACCAGGGCCTTaGGGGATTCCAGCTCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: TRVNLRPQSGLLTSSGYSGSPGP*GIPAPL Trigger: AAGTGGAGCTGGAATCCCCCAAGGCCCTGGTGACCC...TGAATAACCAGAAGATGTGAGGAGCCCTGACTGTGGTCTGAGGTTCACCCGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| CDS-3UTR CCA 90 bp | CCCGCCTTAGCATCCTACAGCCATCATGGGGTCTCACAGACAGGTGGGGTAGCAACCTCCACCAGCAACTaGAAGCTGCTGAAGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PALASYSHHGVSQTGGVATSTSN*KLLKSS Trigger: GGATGACTTCAGCAGCTTCCAGTTGCTGGTGGAGGT...TGCTACCCCACCTGTCTGTGAGACCCCATGATGGCTGTAGGATGCTAAGGCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| CDS-3UTR TCA 90 bp | CCAAGTGTGGTCTGTTTCCCCGGGAAATTTAGGCAGGCCCTTGCAATCCCACCCGCAACTGGAAGCTGCTaGAGTCATCCTTGTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSVVCFPGKFRQALAIPPATGSC*SHPCPA Trigger: AGCAGGACAAGGATGACTTCAGCAGCTTCCAGTTGC...GGGTGGGATTGCAAGGGCCTGCCTAAATTTCCCGGGGAAACAGACCACACTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| CDS-3UTR CCA 90 bp | TACTTGGATAACCCTCTGCATGAAAGGGCAGTGAGCCAGGAACCTCAAGCCACCTGGGGGTGTGGGTGGTaGCGTATTGAAGAGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: YLDNPLHERAVSQEPQATWGCGW*RIEEST Trigger: GGTGGACTCTTCAATACGCCACCACCCACACCCCCA...GGTGGCTTGAGGTTCCTGGCTCACTGCCCTTTCATGCAGAGGGTTATCCAAGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| CDS-3UTR CCA 90 bp | AAGCTCCAGAATAAATCCGAAACAAGCTACAAAGGTGGTGCAGGGTGGGGGTCGATCCTTGTCCTGCTCTaGGGGTGTGGGTGGTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KLQNKSETSYKGGAGWGSILVLL*GCGWWR Trigger: ACGCCACCACCCACACCCCCAGAGCAGGACAAGGAT...CGACCCCCACCCTGCACCACCTTTGTAGCTTGTTTCGGATTTATTCTGGAGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR CAA 72 bp | TTCCTTTGGGGCAGCAGTGTAGCTTGGTGGGAGAGCTaGGAAATGTCCTCTAATCCCAGCACCCTGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLWGSSVAWWES*EMSSNPSTLEA Trigger: TGCCTCCAGGGTGCTGGGATTAGAGGACATTTCCAAGCTCTCCCACCAAGCTACACTGCTGCCCCAAAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150078.2 |
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| CDS-3UTR TCA 90 bp | AGAGACCGCTCTACCTTTCTGATGCCCTGTTTTATCCCAGGAGGGGGAATGCCACTTTTCACCTTGGCCTaGGTGGAGTGGCATGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RDRSTFLMPCFIPGGGMPLFTLA*VEWHGA Trigger: TGCTCCATGCCACTCCACTCAGGCCAAGGTGAAAAG...TGGCATTCCCCCTCCTGGGATAAAACAGGGCATCAGAAAGGTAGAGCGGTCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000081335.13 |
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| CDS-3UTR GCA 90 bp | TCTGAACTCAGCACCACTGCAGAGAATCTGCTGGTCCCTATACAACCATCCTGTTGGGCAGGTTCCCTCTaGGCTTCCTCTTGCCGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SELSTTAENLLVPIQPSCWAGSL*ASSCRS Trigger: TGACCGGCAAGAGGAAGCGCAGAGGGAACCTGCCCA...ACAGGATGGTTGTATAGGGACCAGCAGATTCTCTGCAGTGGTGCTGAGTTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| CDS-3UTR CCA 90 bp | CAGGTAGATCTTTGTGAATTGCAGGCCAGAGGCCTGAGGCCAGTCTGGTCATCCTCTTTACTGACTCCTTaGGCAGGTTCCCTCTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QVDLCELQARGLRPVWSSSLLTP*AGSLCA Trigger: AGCGCAGAGGGAACCTGCCCAAGGAGTCAGTAAAGA...GGATGACCAGACTGGCCTCAGGCCTCTGGCCTGCAATTCACAAAGATCTACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150078.2 |
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| CDS-3UTR CCA 90 bp | ACCCGGGTGAACCTCAGACCACAGTCAGGGCTCCTCACATCTTCTGGTTATTCAGCTGGCTTTTCACCTTaGCCTGAGTGGAGTGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: TRVNLRPQSGLLTSSGYSAGFSP*PEWSGM Trigger: CATGCCACTCCACTCAGGCCAAGGTGAAAAGCCAGC...TGAATAACCAGAAGATGTGAGGAGCCCTGACTGTGGTCTGAGGTTCACCCGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081335.13 |
||
| CDS-3UTR CCA 90 bp | TACTTGGATAACCCTCTGCATGAAAGGGCAGTGAGCCAGGAACCTCAAGCCACCTTCCAGCTCCACTTGTaGGAAGGGTGCTGCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YLDNPLHERAVSQEPQATFQLHL*EGCCWL Trigger: AAGCCAGCAGCACCCTTCCCACAAGTGGAGCTGGAA...GGTGGCTTGAGGTTCCTGGCTCACTGCCCTTTCATGCAGAGGGTTATCCAAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| CDS-3UTR CCA 90 bp | TCCCCACACCTGTGCTTCTGGGCTACCTACTGCATTAACACAAACCACAGCAAAATCCTTGTCCTGCTCTaGGGGTGTGGGTGGTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SPHLCFWATYCINTNHSKILVLL*GCGWWR Trigger: ACGCCACCACCCACACCCCCAGAGCAGGACAAGGAT...TTTGCTGTGGTTTGTGTTAATGCAGTAGGTAGCCCAGAAGCACAGGTGTGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR CAA 72 bp | AAGCAGCCCCTTACAAATAGCCATTCTCGCGCCCACTaGCACAGCAAGGGATGGGTGAAGTCACTCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KQPLTNSHSRAH*HSKGWVKSLRR Trigger: TCTCCTGAGTGACTTCACCCATCCCTTGCTGTGCAAGTGGGCGCGAGAATGGCTATTTGTAAGGGGCTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| CDS-3UTR GCA 90 bp | CTGATGCTTGGCAGTGATCCGTACTTGGATAACCCTCTGCATGAAAGGGCAGTGTTGTGGGAAGGGTGCTaGTGGCTTTTCACCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LMLGSDPYLDNPLHERAVLWEGC*WLFTLA Trigger: GGCCAAGGTGAAAAGCCAGCAGCACCCTTCCCACAA...CACTGCCCTTTCATGCAGAGGGTTATCCAAGTACGGATCACTGCCAAGCATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| CDS-3UTR GCA 90 bp | AGAGACCGCTCTACCTTTCTGATGCCCTGTTTTATCCCAGGAGGGGGAATGCCACACTTGTGGGAAGGGTaGTGCTGGCTTTTCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RDRSTFLMPCFIPGGGMPHLWEG*CWLFTL Trigger: CAAGGTGAAAAGCCAGCAGCACCCTTCCCACAAGTG...TGGCATTCCCCCTCCTGGGATAAAACAGGGCATCAGAAAGGTAGAGCGGTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| CDS-3UTR CCA 90 bp | AGAGACCGCTCTACCTTTCTGATGCCCTGTTTTATCCCAGGAGGGGGAATGCCAGCAGCACCGAGAGGTTaGTCTGTCCAGAGAGACTTA | + |
|
Preference number: 4 (lower is better) Translates to: RDRSTFLMPCFIPGGGMPAAPRG*SVQRDL Trigger: TAAGTCTCTCTGGACAGACCAACCTCTCGGTGCTGC...TGGCATTCCCCCTCCTGGGATAAAACAGGGCATCAGAAAGGTAGAGCGGTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| CDS-3UTR CCA 90 bp | AGAGACCGCTCTACCTTTCTGATGCCCTGTTTTATCCCAGGAGGGGGAATGCCAACCTCCACCAGCAACTaGAAGCTGCTGAAGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RDRSTFLMPCFIPGGGMPTSTSN*KLLKSS Trigger: GGATGACTTCAGCAGCTTCCAGTTGCTGGTGGAGGT...TGGCATTCCCCCTCCTGGGATAAAACAGGGCATCAGAAAGGTAGAGCGGTCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR CAA 72 bp | GACAGAATGGTCCTGATGCTTGGCAGTGATCCGTACTaGGATAACCCTCTGCATGAAAGGGCAGTGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DRMVLMLGSDPY*DNPLHERAVSQ Trigger: CTGGCTCACTGCCCTTTCATGCAGAGGGTTATCCAAGTACGGATCACTGCCAAGCATCAGGACCATTCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| CDS-3UTR CCA 90 bp | CTGAACTCAGCACCACTGCAGAGAATCTGCTGGTCCCTATACAACCATCCTGTGTCTTTACTGACTCCTTaGGCAGGTTCCCTCTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LNSAPLQRICWSLYNHPVSLLTP*AGSLCA Trigger: AGCGCAGAGGGAACCTGCCCAAGGAGTCAGTAAAGA...CACAGGATGGTTGTATAGGGACCAGCAGATTCTCTGCAGTGGTGCTGAGTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| CDS-3UTR CCA 90 bp | TCCCCACACCTGTGCTTCTGGGCTACCTACTGCATTAACACAAACCACAGCAAACTGAGTGGAGTGGCATaGAGCACACAGACAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPHLCFWATYCINTNHSKLSGVA*STQTRR Trigger: TCTCCTTGTCTGTGTGCTCCATGCCACTCCACTCAG...TTTGCTGTGGTTTGTGTTAATGCAGTAGGTAGCCCAGAAGCACAGGTGTGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081335.13 |
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| CDS-3UTR CCA 90 bp | GAGTTACTCAGAACAGAGAGAAAAACAGAGCTGTTTCACTCTAGCTTAACCACGGCTGGCTTTTCACCTTaGCCCCCACGACGGGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: ELLRTERKTELFHSSLTTAGFSP*PPRREM Trigger: CATCTCCCGTCGTGGGGGCCAAGGTGAAAAGCCAGC...CGTGGTTAAGCTAGAGTGAAACAGCTCTGTTTTTCTCTCTGTTCTGAGTAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000073352.10 |
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| CDS-3UTR GCA 90 bp | TCCCCACACCTGTGCTTCTGGGCTACCTACTGCATTAACACAAACCACAGCAAAAACCAGTTACATATCTaGAGCACCGAGAGGTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPHLCFWATYCINTNHSKNQLHI*STERLV Trigger: GACCAACCTCTCGGTGCTGCAGATATGTAACTGGTT...TTTGCTGTGGTTTGTGTTAATGCAGTAGGTAGCCCAGAAGCACAGGTGTGGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| 3UTR CAA 72 bp | ACATCTGCTGGGCATTTCCTTTGTCCTTTGAATAGGTaGGAATGTGCACACCTGGCTCGACCAAAAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSAGHFLCPLNR*ECAHLARPKEA Trigger: TGCCTCTTTTGGTCGAGCCAGGTGTGCACATTCCAACCTATTCAAAGGACAAAGGAAATGCCCAGCAGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| CDS-3UTR GCA 90 bp | GAGTTACTCAGAACAGAGAGAAAAACAGAGCTGTTTCACTCTAGCTTAACCACGAACCAGTTACATATCTaGAGCACCGAGAGGTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ELLRTERKTELFHSSLTTNQLHI*STERLV Trigger: GACCAACCTCTCGGTGCTGCAGATATGTAACTGGTT...CGTGGTTAAGCTAGAGTGAAACAGCTCTGTTTTTCTCTCTGTTCTGAGTAACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| CDS-3UTR CAA 90 bp | CAGGAGAGGTATGGAAGCCTGCTAAGCCTCAGGGGCTCCCTGGAAAGGCCAGAGGTGGGTGGTGGCGTATaGAAGAGTCCACCCGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: QERYGSLLSLRGSLERPEVGGGV*KSPPVG Trigger: CCCCACGGGTGGACTCTTCAATACGCCACCACCCAC...CTCTGGCCTTTCCAGGGAGCCCCTGAGGCTTAGCAGGCTTCCATACCTCTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| CDS-3UTR CAA 90 bp | CAGGAGAGGTATGGAAGCCTGCTAAGCCTCAGGGGCTCCCTGGAAAGGCCAGAGATCTTTACTGACTCCTaGGGCAGGTTCCCTCTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: QERYGSLLSLRGSLERPEIFTDS*GRFPLR Trigger: GCGCAGAGGGAACCTGCCCAAGGAGTCAGTAAAGAT...CTCTGGCCTTTCCAGGGAGCCCCTGAGGCTTAGCAGGCTTCCATACCTCTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| CDS-3UTR CAA 90 bp | CGGAACAGGCACTCCAAGCCAGTCAACATCCAAGAGCCCCGTCTGTGCTCACACCTGCTGAAGTCATCCTaGTCCTGCTCTGGGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RNRHSKPVNIQEPRLCSHLLKSS*SCSGGV Trigger: CACACCCCCAGAGCAGGACAAGGATGACTTCAGCAG...GTGTGAGCACAGACGGGGCTCTTGGATGTTGACTGGCTTGGAGTGCCTGTTCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| CDS-3UTR CAA 90 bp | GGTGGGAGAGCTTGGAAATGTCCTCTAATCCCAGCACCCTGGAGGCAGAGGCAGATCTTTACTGACTCCTaGGGCAGGTTCCCTCTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GGRAWKCPLIPAPWRQRQIFTDS*GRFPLR Trigger: GCGCAGAGGGAACCTGCCCAAGGAGTCAGTAAAGAT...CTGCCTCTGCCTCCAGGGTGCTGGGATTAGAGGACATTTCCAAGCTCTCCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150078.2 |
||
| CDS CCA 90 bp | GATTCCAGCTCCACTTGTGGGAAGGGTGCTGCTGGCTTTTCACCTTaGCCTGAGTGGAGTGGCATGGAGCACACAGACAAGGAGAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: DSSSTCGKGAAGFSP*PEWSGMEHTDKESM Trigger: CATGCTCTCCTTGTCTGTGTGCTCCATGCCACTCCACTCAGGCCAAGGTGAAAAGCCAGCAGCACCCTTCCCACAAGTGGAGCTGGAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081335.13 |
||
| CDS TCA 90 bp | CAGCTCCACTTGTGGGAAGGGTGCTGCTGGCTTTTCACCTTGGCCTaGGTGGAGTGGCATGGAGCACACAGACAAGGAGAGCATGTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: QLHLWEGCCWLFTLA*VEWHGAHRQGEHVS Trigger: ACTAACATGCTCTCCTTGTCTGTGTGCTCCATGCCACTCCACTCAGGCCAAGGTGAAAAGCCAGCAGCACCCTTCCCACAAGTGGAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081335.13 |
||
| CDS-3UTR CAA 90 bp | ACCCGGGTGAACCTCAGACCACAGTCAGGGCTCCTCACATCTTCTGGTTATTCACTGCTGAAGTCATCCTaGTCCTGCTCTGGGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TRVNLRPQSGLLTSSGYSLLKSS*SCSGGV Trigger: CACACCCCCAGAGCAGGACAAGGATGACTTCAGCAG...TGAATAACCAGAAGATGTGAGGAGCCCTGACTGTGGTCTGAGGTTCACCCGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| CDS-3UTR CAA 90 bp | ACCCGGGTGAACCTCAGACCACAGTCAGGGCTCCTCACATCTTCTGGTTATTCAAGGTGGCGCTGGCTCTaGCTGCTTCTGAAGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TRVNLRPQSGLLTSSGYSRWRWL*LLLKLH Trigger: ATGGAGCTTCAGAAGCAGCAAGAGCCAGCGCCACCT...TGAATAACCAGAAGATGTGAGGAGCCCTGACTGTGGTCTGAGGTTCACCCGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| CDS-3UTR CAA 90 bp | AAGCTCCAGAATAAATCCGAAACAAGCTACAAAGGTGGTGCAGGGTGGGGGTCGATCTTTACTGACTCCTaGGGCAGGTTCCCTCTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: KLQNKSETSYKGGAGWGSIFTDS*GRFPLR Trigger: GCGCAGAGGGAACCTGCCCAAGGAGTCAGTAAAGAT...CGACCCCCACCCTGCACCACCTTTGTAGCTTGTTTCGGATTTATTCTGGAGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| CDS-3UTR CAA 90 bp | AGAGACCGCTCTACCTTTCTGATGCCCTGTTTTATCCCAGGAGGGGGAATGCCAAGGCGACGACGGGCATaGATGAACCAGTTACATATC | + |
|
Preference number: 5 (lower is better) Translates to: RDRSTFLMPCFIPGGGMPRRRRA*MNQLHI Trigger: GATATGTAACTGGTTCATCAATGCCCGTCGTCGCCT...TGGCATTCCCCCTCCTGGGATAAAACAGGGCATCAGAAAGGTAGAGCGGTCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
||
| CDS-3UTR CAA 90 bp | GGAAGACCAAACCAAGAATTAAACAACCACTCTAGTCTGAACTCAGCACCACTGGTGGGTGGTGGCGTATaGAAGAGTCCACCCGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: GRPNQELNNHSSLNSAPLVGGGV*KSPPVG Trigger: CCCCACGGGTGGACTCTTCAATACGCCACCACCCAC...CAGTGGTGCTGAGTTCAGACTAGAGTGGTTGTTTAATTCTTGGTTTGGTCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| CDS-3UTR CAA 90 bp | GCTGGGCATTTCCTTTGTCCTTTGAATAGGTTGGAATGTGCACACCTGGCTCGAAGGCGACGACGGGCATaGATGAACCAGTTACATATC | + |
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Preference number: 5 (lower is better) Translates to: AGHFLCPLNRLECAHLARRRRRA*MNQLHI Trigger: GATATGTAACTGGTTCATCAATGCCCGTCGTCGCCT...TCGAGCCAGGTGTGCACATTCCAACCTATTCAAAGGACAAAGGAAATGCCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| CDS-3UTR CAA 90 bp | GGAAGACCAAACCAAGAATTAAACAACCACTCTAGTCTGAACTCAGCACCACTGAGGTGGCGCTGGCTCTaGCTGCTTCTGAAGCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: GRPNQELNNHSSLNSAPLRWRWL*LLLKLH Trigger: ATGGAGCTTCAGAAGCAGCAAGAGCCAGCGCCACCT...CAGTGGTGCTGAGTTCAGACTAGAGTGGTTGTTTAATTCTTGGTTTGGTCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073352.10 ENSMUST00000081335.13 |
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| CDS CCA 72 bp | GGTCACCAGGGCCTTGGGGGATTCCAGCTCCACTTGTaGGAAGGGTGCTGCTGGCTTTTCACCTTGGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: GHQGLGGFQLHL*EGCCWLFTLAP Trigger: GGGGGCCAAGGTGAAAAGCCAGCAGCACCCTTCCCACAAGTGGAGCTGGAATCCCCCAAGGCCCTGGTGACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073352.10 |
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| CDS CCA 72 bp | TCCACTTGTGGGAAGGGTGCTGCTGGCTTTTCACCTTaGCCTGAGTGGAGTGGCATGGAGCACACAGACAAG | + |
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Preference number: 6 (lower is better) Translates to: STCGKGAAGFSP*PEWSGMEHTDK Trigger: CTTGTCTGTGTGCTCCATGCCACTCCACTCAGGCCAAGGTGAAAAGCCAGCAGCACCCTTCCCACAAGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081335.13 |
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