Pregenerated sensors for TGIF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047407Ensembl transcript IDs: ENSMUST00000059775.15, ENSMUST00000118283.8, ENSMUST00000156484.2, ENSMUST00000166395.9, ENSMUST00000172229.8, ENSMUST00000186358.6
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTaGACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGAT | + |
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Preference number: 1 (lower is better) Translates to: PIPHGKREVRGRLKY*TVLEHKEEESGGED Trigger: ATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| 3UTR CCA 90 bp | CTGAAAGTTTACTCATTAGACTGTAGGTGGGCGTCCCATTCCACATaGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCTT | + |
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Preference number: 1 (lower is better) Translates to: LKVYSLDCRWASHST*EERGARASKVLHSL Trigger: AAGACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTCTAATGAGTAAACTTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| 3UTR-3UTR TCA 90 bp | GACGGGCGAGCCAAAATGGATCCTGGGGAGGGAGGTTTGGGAGACACTGGTCTCAATAGAGCTAGCTTCTaGAATCTTGGCCCCACGGCG | + |
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Preference number: 2 (lower is better) Translates to: DGRAKMDPGEGGLGDTGLNRASF*NLGPTA Trigger: CGCCGTGGGGCCAAGATTTCAGAAGCTAGCTCTATT...GAGACCAGTGTCTCCCAAACCTCCCTCCCCAGGATCCATTTTGGCTCGCCCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000156484.2 ENSMUST00000186358.6 |
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| 3UTR-3UTR TCA 90 bp | GACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAATAGAGCTAGCTTCTaGAATCTTGGCCCCACGGCG | + |
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Preference number: 2 (lower is better) Translates to: DCRWASHSTWEERGARASNRASF*NLGPTA Trigger: CGCCGTGGGGCCAAGATTTCAGAAGCTAGCTCTATT...AGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186358.6 |
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| 3UTR-3UTR CCA 90 bp | CCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCGCGTCCCATTCCACATaGGAAGAGAGAGGTGCGAGG | + |
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Preference number: 2 (lower is better) Translates to: PIPHGKREVRGRLKYCTVASHST*EERGAR Trigger: CCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGC...GACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| 3UTR-3UTR CCA 90 bp | AGATCACTGACGGGCGAGCCAAAATGGATCCTGGGGAGGGAGGTTTGGGAGACATCCCTAGGGTTGGGTTaGGTCCAACTACGCAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: RSLTGEPKWILGREVWETSLGLG*VQLRRN Trigger: ATTCCTGCGTAGTTGGACCCAACCCAACCCTAGGGA...TGTCTCCCAAACCTCCCTCCCCAGGATCCATTTTGGCTCGCCCGTCAGTGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000156484.2 ENSMUST00000186358.6 |
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| 3UTR-3UTR TCA 90 bp | AGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTAGAGGAGAAGATCACATaGTACTGGGAACCGTCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: RWASHSTWEERGARASKVEEKIT*YWEPSH Trigger: GTGAGACGGTTCCCAGTATCATGTGATCTTCTCCTC...TACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| 3UTR-3UTR TCA 90 bp | TGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGGAGGAGAAGATCACATaGTACTGGGAACCGTCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: WASHSTWEERGARASKVLEEKIT*YWEPSH Trigger: GTGAGACGGTTCCCAGTATCATGTGATCTTCTCCTC...CAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| 3UTR-3UTR CCA 90 bp | GGTGTCTGTAAAGTTGCTGGGTGCTATTTGCGGTACATCTGTACTCTGTCCCACCTGGGGAGGGAGGTTTaGGAGACACTGGTCTCCCTA | + |
|
Preference number: 2 (lower is better) Translates to: GVCKVAGCYLRYICTLSHLGREV*ETLVSL Trigger: TAGGGAGACCAGTGTCTCCCAAACCTCCCTCCCCAG...GTGGGACAGAGTACAGATGTACCGCAAATAGCACCCAGCAACTTTACAGACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000156484.2 ENSMUST00000186358.6 |
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| 3UTR-3UTR CCA 90 bp | CCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCAGCCAAAATGGATCCTaGGGAGGGAGGTTTGGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: PIPHGKREVRGRLKYCTVSQNGS*GGRFGR Trigger: TCTCCCAAACCTCCCTCCCCAGGATCCATTTTGGCT...GACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186358.6 |
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| 3UTR-3UTR TCA 90 bp | TGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGACAGGAAGCTTCGTCTaGGCAATCCCATGTGCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: WASHSTWEERGARASKVLTGSFV*AIPCAN Trigger: ATTTGCACATGGGATTGCTCAGACGAAGCTTCCTGT...CAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| 3UTR-3UTR TCA 90 bp | CCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCGAGGAGAAGATCACATaGTACTGGGAACCGTCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: PIPHGKREVRGRLKYCTVEEKIT*YWEPSH Trigger: GTGAGACGGTTCCCAGTATCATGTGATCTTCTCCTC...GACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| 3UTR-3UTR TCA 90 bp | CCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCACAGGAAGCTTCGTCTaGGCAATCCCATGTGCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: PIPHGKREVRGRLKYCTVTGSFV*AIPCAN Trigger: ATTTGCACATGGGATTGCTCAGACGAAGCTTCCTGT...GACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| 3UTR-3UTR CCA 90 bp | GACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAGTATTGCACAGTCTTaGAACATAAAGAAGAGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: DCRWASHSTWEERGARASSIAQS*NIKKRS Trigger: ACTCCTCTTCTTTATGTTCCAAGACTGTGCAATACT...AGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| 3UTR-3UTR CCA 90 bp | GACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTATCAGGACCGTATTTTaGAGAACTGTTTTGTTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: DCRWASHSTWEERGARASIRTVF*RTVLFE Trigger: TTCAAACAAAACAGTTCTCCAAAATACGGTCCTGAT...AGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| 3UTR-3UTR TCA 90 bp | GGTGTCTGTAAAGTTGCTGGGTGCTATTTGCGGTACATCTGTACTCTGTCCCACAACCAGTTACAGACCTaGAATCACACAGGGTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: GVCKVAGCYLRYICTLSHNQLQT*NHTGSP Trigger: AGGAGACCCTGTGTGATTTCAGGTCTGTAACTGGTT...GTGGGACAGAGTACAGATGTACCGCAAATAGCACCCAGCAACTTTACAGACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156484.2 |
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| 3UTR CAA 90 bp | CATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCTaGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATCACATGATA | + |
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Preference number: 2 (lower is better) Translates to: HGKREVRGRLKYCTV*EHKEEESGGEDHMI Trigger: TATCATGTGATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| 3UTR-3UTR TCA 90 bp | CCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCAACCGTCTCACATTATaGGAAACTACCAAGAAACAT | + |
|
Preference number: 2 (lower is better) Translates to: PIPHGKREVRGRLKYCTVNRLTL*ETTKKH Trigger: ATGTTTCTTGGTAGTTTCTCATAATGTGAGACGGTT...GACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| 3UTR-3UTR CCA 90 bp | CCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCATCAGGACCGTATTTTaGAGAACTGTTTTGTTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: PIPHGKREVRGRLKYCTVIRTVF*RTVLFE Trigger: TTCAAACAAAACAGTTCTCCAAAATACGGTCCTGAT...GACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| 3UTR-3UTR CCA 90 bp | CTAAAGTATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATTCCCTAGGGTTGGGTTaGGTCCAACTACGCAGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: LKYCTVLEHKEEESGGEDSLGLG*VQLRRN Trigger: ATTCCTGCGTAGTTGGACCCAACCCAACCCTAGGGA...ATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATACTTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186358.6 |
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| 3UTR-3UTR TCA 90 bp | AGTATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATCACAACAGGAAGCTTCGTCTaGGCAATCCCATGTGCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: SIAQSWNIKKRSLEEKITTGSFV*AIPCAN Trigger: ATTTGCACATGGGATTGCTCAGACGAAGCTTCCTGT...TGTGATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| 3UTR-3UTR CCA 90 bp | CCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCTTGGAAATCAGGACCGTATTTTaGAGAACTGTTTTGTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: PHGKREVRGRLKYCTVLEIRTVF*RTVLFE Trigger: TTCAAACAAAACAGTTCTCCAAAATACGGTCCTGAT...TTCCAAGACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| 3UTR-3UTR TCA 90 bp | AAAGTTTACTCATTAGACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAAACCGTCTCACATTATaGGAAACTACCAAGAAACAT | + |
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Preference number: 2 (lower is better) Translates to: KVYSLDCRWASHSTWEERNRLTL*ETTKKH Trigger: ATGTTTCTTGGTAGTTTCTCATAATGTGAGACGGTT...TCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTCTAATGAGTAAACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| 3UTR-3UTR CCA 90 bp | TATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATCACATGATCAGGACCGTATTTTaGAGAACTGTTTTGTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: YCTVLEHKEEESGGEDHMIRTVF*RTVLFE Trigger: TTCAAACAAAACAGTTCTCCAAAATACGGTCCTGAT...CATGTGATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| 3UTR-3UTR CAA 90 bp | GACGGGCGAGCCAAAATGGATCCTGGGGAGGGAGGTTTGGGAGACACTGGTCTCCTAGCTTCTGAAATCTaGGCCCCACGGCGGGAAATC | + |
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Preference number: 3 (lower is better) Translates to: DGRAKMDPGEGGLGDTGLLASEI*APRREI Trigger: GATTTCCCGCCGTGGGGCCAAGATTTCAGAAGCTAG...GAGACCAGTGTCTCCCAAACCTCCCTCCCCAGGATCCATTTTGGCTCGCCCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000156484.2 ENSMUST00000186358.6 |
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| 3UTR-3UTR CAA 90 bp | AGATCACTGACGGGCGAGCCAAAATGGATCCTGGGGAGGGAGGTTTGGGAGACACTGGTCTCCCTAGGGTaGGGTTGGGTCCAACTACGC | + |
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Preference number: 3 (lower is better) Translates to: RSLTGEPKWILGREVWETLVSLG*GWVQLR Trigger: GCGTAGTTGGACCCAACCCAACCCTAGGGAGACCAG...TGTCTCCCAAACCTCCCTCCCCAGGATCCATTTTGGCTCGCCCGTCAGTGATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000156484.2 ENSMUST00000186358.6 |
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| 3UTR-3UTR CAA 90 bp | AGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTACTGGTCTCCCTAGGGTaGGGTTGGGTCCAACTACGC | + |
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Preference number: 3 (lower is better) Translates to: RWASHSTWEERGARASKVLVSLG*GWVQLR Trigger: GCGTAGTTGGACCCAACCCAACCCTAGGGAGACCAG...TACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186358.6 |
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| 3UTR-3UTR CAA 90 bp | AGATCACTGACGGGCGAGCCAAAATGGATCCTGGGGAGGGAGGTTTGGGAGACACTAGCTTCTGAAATCTaGGCCCCACGGCGGGAAATC | + |
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Preference number: 3 (lower is better) Translates to: RSLTGEPKWILGREVWETLASEI*APRREI Trigger: GATTTCCCGCCGTGGGGCCAAGATTTCAGAAGCTAG...TGTCTCCCAAACCTCCCTCCCCAGGATCCATTTTGGCTCGCCCGTCAGTGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000156484.2 ENSMUST00000186358.6 |
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| 3UTR-3UTR CAA 90 bp | GGTGTCTGTAAAGTTGCTGGGTGCTATTTGCGGTACATCTGTACTCTGTCCCACCCTGGGGAGGGAGGTTaGGGAGACACTGGTCTCCCT | + |
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Preference number: 3 (lower is better) Translates to: GVCKVAGCYLRYICTLSHPGEGG*GDTGLP Trigger: AGGGAGACCAGTGTCTCCCAAACCTCCCTCCCCAGG...GTGGGACAGAGTACAGATGTACCGCAAATAGCACCCAGCAACTTTACAGACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000156484.2 ENSMUST00000186358.6 |
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| 3UTR-3UTR CAA 90 bp | GACGGGCGAGCCAAAATGGATCCTGGGGAGGGAGGTTTGGGAGACACTGGTCTCGTTGGCATGAAGTTTTaGATACCCATTGCAGCTTCA | + |
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Preference number: 3 (lower is better) Translates to: DGRAKMDPGEGGLGDTGLVGMKF*IPIAAS Trigger: TGAAGCTGCAATGGGTATCAAAAACTTCATGCCAAC...GAGACCAGTGTCTCCCAAACCTCCCTCCCCAGGATCCATTTTGGCTCGCCCGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000156484.2 ENSMUST00000186358.6 |
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| 3UTR-3UTR CAA 90 bp | TGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGGTTGGCATGAAGTTTTaGATACCCATTGCAGCTTCA | + |
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Preference number: 3 (lower is better) Translates to: WASHSTWEERGARASKVLVGMKF*IPIAAS Trigger: TGAAGCTGCAATGGGTATCAAAAACTTCATGCCAAC...CAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186358.6 |
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| 3UTR TCA 72 bp | TTTGATACCCATTGCAGCTTCAATAGAGCTAGCTTCTaGAATCTTGGCCCCACGGCGGGAAATCGTGAACTG | + |
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Preference number: 3 (lower is better) Translates to: FDTHCSFNRASF*NLGPTAGNREL Trigger: CAGTTCACGATTTCCCGCCGTGGGGCCAAGATTTCAGAAGCTAGCTCTATTGAAGCTGCAATGGGTATCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000156484.2 ENSMUST00000186358.6 |
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| 3UTR GCA 72 bp | CATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTaGACAGTCTTGGAACATAAAGAAGAGGAGTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: HGKREVRGRLKY*TVLEHKEEESG Trigger: TCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| 3UTR-3UTR CAA 90 bp | CCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCAAGTATTGCACAGTCTaGGAACATAAAGAAGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: PIPHGKREVRGRLKYCTVKYCTV*EHKEEE Trigger: CTCCTCTTCTTTATGTTCCAAGACTGTGCAATACTT...GACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| 3UTR-3UTR CAA 90 bp | AAAGTTTACTCATTAGACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAAAAATAATGCATCTCTaGCCATCACCCCCGGCAATC | + |
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Preference number: 3 (lower is better) Translates to: KVYSLDCRWASHSTWEERKIMHL*PSPPAI Trigger: GATTGCCGGGGGTGATGGCAAGAGATGCATTATTTT...TCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTCTAATGAGTAAACTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| 3UTR-3UTR CAA 90 bp | AGTATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATCACAAAAATAATGCATCTCTaGCCATCACCCCCGGCAATC | + |
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Preference number: 3 (lower is better) Translates to: SIAQSWNIKKRSLEEKITKIMHL*PSPPAI Trigger: GATTGCCGGGGGTGATGGCAAGAGATGCATTATTTT...TGTGATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| 3UTR-3UTR CAA 90 bp | TATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATCACATGAAAATAATGCATCTCTaGCCATCACCCCCGGCAATC | + |
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Preference number: 3 (lower is better) Translates to: YCTVLEHKEEESGGEDHMKIMHL*PSPPAI Trigger: GATTGCCGGGGGTGATGGCAAGAGATGCATTATTTT...CATGTGATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| 3UTR-3UTR CAA 90 bp | CTAAAGTATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATAAAATAATGCATCTCTaGCCATCACCCCCGGCAATC | + |
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Preference number: 3 (lower is better) Translates to: LKYCTVLEHKEEESGGEDKIMHL*PSPPAI Trigger: GATTGCCGGGGGTGATGGCAAGAGATGCATTATTTT...ATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATACTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| CDS-3UTR GCA 90 bp | TGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCCAGAAGCAGGGTCATaGCTGCCTGCCCGTGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: WASHSTWEERGARASKVLPEAGS*LPARGE Trigger: CTCGCCACGGGCAGGCAGGCATGACCCTGCTTCTGG...CAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166395.9 |
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| CDS-3UTR CCA 90 bp | GACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTCTGGGGAGGGAGGTTTaGGAGACACTGGTCTCCCTA | + |
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Preference number: 4 (lower is better) Translates to: DCRWASHSTWEERGARASLGREV*ETLVSL Trigger: TAGGGAGACCAGTGTCTCCCAAACCTCCCTCCCCAG...AGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
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| CDS-3UTR GCA 90 bp | GACGGGCGAGCCAAAATGGATCCTGGGGAGGGAGGTTTGGGAGACACTGGTCTCGTGGACAGGTGTGTCTaGTGGGACAGCAGTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DGRAKMDPGEGGLGDTGLVDRCV*WDSSAF Trigger: GAAAGCACTGCTGTCCCAGCAGACACACCTGTCCAC...GAGACCAGTGTCTCCCAAACCTCCCTCCCCAGGATCCATTTTGGCTCGCCCGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000156484.2 ENSMUST00000186358.6 |
||
| CDS-3UTR GCA 90 bp | TGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGAAGCAGGGTCATGCCTaGCTGCCCGTGGCGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WASHSTWEERGARASKVLKQGHA*LPVARA Trigger: TGCTCTCGCCACGGGCAGGCAGGCATGACCCTGCTT...CAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166395.9 |
||
| CDS-3UTR TCA 90 bp | AGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTACCCACACCAATCGGCTaGCAGAGAGAGAAAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RWASHSTWEERGARASKVPTPIG*QREKGP Trigger: TGGGCCTTTCTCTCTCTGTCAGCCGATTGGTGTGGG...TACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR GCA 90 bp | GACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTCTGAAGCTCCATCTCTaGCGCTCGTTTGAGTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: DCRWASHSTWEERGARASLKLHL*RSFECN Trigger: GTTGCACTCAAACGAGCGGCAGAGATGGAGCTTCAG...AGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR CCA 90 bp | GACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTTCCCTAGGGTTGGGTTaGGTCCAACTACGCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: DCRWASHSTWEERGARASSLGLG*VQLRRN Trigger: ATTCCTGCGTAGTTGGACCCAACCCAACCCTAGGGA...AGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATCTGGGGAGGGAGGTTTaGGAGACACTGGTCTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: GGRPIPHGKREVRGRLKYLGREV*ETLVSL Trigger: TAGGGAGACCAGTGTCTCCCAAACCTCCCTCCCCAG...ATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR CCA 90 bp | GACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAGCCAAAATGGATCCTaGGGAGGGAGGTTTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: DCRWASHSTWEERGARASSQNGS*GGRFGR Trigger: TCTCCCAAACCTCCCTCCCCAGGATCCATTTTGGCT...AGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCCCACACCAATCGGCTaGCAGAGAGAGAAAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WASHSTWEERGARASKVLPTPIG*QREKGP Trigger: TGGGCCTTTCTCTCTCTGTCAGCCGATTGGTGTGGG...CAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR TCA 90 bp | GACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTTCTCTGCCGCTCGTTTaGGTGCAACATCCACTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: DCRWASHSTWEERGARASSLPLV*VQHPLE Trigger: TTCTAGTGGATGTTGCACTCAAACGAGCGGCAGAGA...AGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGGCTGTGAGTTTGGCCTaGAGCTCCATCTCTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: WASHSTWEERGARASKVLAVSLA*SSISAA Trigger: AGCGGCAGAGATGGAGCTTCAGGCCAAACTCACAGC...CAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR CCA 90 bp | AGATCACTGACGGGCGAGCCAAAATGGATCCTGGGGAGGGAGGTTTGGGAGACATCTGGACTGACTCCTTaGGCAGATTGCCTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSLTGEPKWILGREVWETSGLTP*ADCLSS Trigger: GGAGGAGAGGCAATCTGCCCAAGGAGTCAGTCCAGA...TGTCTCCCAAACCTCCCTCCCCAGGATCCATTTTGGCTCGCCCGTCAGTGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000156484.2 ENSMUST00000186358.6 |
||
| CDS-3UTR TCA 90 bp | GACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTTGCTTTCTCTTGCTCTaGGGGATAGGCGTTGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: DCRWASHSTWEERGARASCFLLL*GIGVVS Trigger: AGATACAACGCCTATCCCTCAGAGCAAGAGAAAGCA...AGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
||
| CDS-3UTR TCA 90 bp | CCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCCCCACACCAATCGGCTaGCAGAGAGAGAAAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PIPHGKREVRGRLKYCTVPTPIG*QREKGP Trigger: TGGGCCTTTCTCTCTCTGTCAGCCGATTGGTGTGGG...GACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR TCA 90 bp | CCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCGCTGTGAGTTTGGCCTaGAGCTCCATCTCTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PIPHGKREVRGRLKYCTVAVSLA*SSISAA Trigger: AGCGGCAGAGATGGAGCTTCAGGCCAAACTCACAGC...GACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR GCA 90 bp | TGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGGTGGACAGGTGTGTCTaGTGGGACAGCAGTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: WASHSTWEERGARASKVLVDRCV*WDSSAF Trigger: GAAAGCACTGCTGTCCCAGCAGACACACCTGTCCAC...CAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
||
| CDS-3UTR GCA 90 bp | AGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTACTGAAGCTCCATCTCTaGCGCTCGTTTGAGTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RWASHSTWEERGARASKVLKLHL*RSFECN Trigger: GTTGCACTCAAACGAGCGGCAGAGATGGAGCTTCAG...TACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTAGACAGGTGTGTCTGCTaGGACAGCAGTGCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RWASHSTWEERGARASKVDRCVC*DSSAFS Trigger: AGAGAAAGCACTGCTGTCCCAGCAGACACACCTGTC...TACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
||
| CDS-3UTR CCA 90 bp | TACTCATTAGACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGACGGGCGAGCCAAAATaGATCCTGGGGAGGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: YSLDCRWASHSTWEERGATGEPK*ILGREV Trigger: AACCTCCCTCCCCAGGATCCATTTTGGCTCGCCCGT...CGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTCTAATGAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR CCA 90 bp | CCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCACGGGCGAGCCAAAATaGATCCTGGGGAGGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PIPHGKREVRGRLKYCTVTGEPK*ILGREV Trigger: AACCTCCCTCCCCAGGATCCATTTTGGCTCGCCCGT...GACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR TCA 90 bp | AGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATCTCTGCCGCTCGTTTaGGTGCAACATCCACTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RWASHSTWEERGARASKVSLPLV*VQHPLE Trigger: TTCTAGTGGATGTTGCACTCAAACGAGCGGCAGAGA...TACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR GCA 90 bp | AGATCACTGACGGGCGAGCCAAAATGGATCCTGGGGAGGGAGGTTTGGGAGACAGTCACTGCCAGATGCTaGAACAAGACCCTTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSLTGEPKWILGREVWETVTARC*NKTLLA Trigger: AGCAAGAAGGGTCTTGTTGCAGCATCTGGCAGTGAC...TGTCTCCCAAACCTCCCTCCCCAGGATCCATTTTGGCTCGCCCGTCAGTGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186358.6 |
||
| CDS-3UTR GCA 90 bp | CCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCGTGGACAGGTGTGTCTaGTGGGACAGCAGTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PIPHGKREVRGRLKYCTVVDRCV*WDSSAF Trigger: GAAAGCACTGCTGTCCCAGCAGACACACCTGTCCAC...GACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
||
| CDS-3UTR CCA 90 bp | TACTCATTAGACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGTCTGGACTGACTCCTTaGGCAGATTGCCTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YSLDCRWASHSTWEERGASGLTP*ADCLSS Trigger: GGAGGAGAGGCAATCTGCCCAAGGAGTCAGTCCAGA...CGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTCTAATGAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
||
| CDS-3UTR CCA 90 bp | CCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCTTGGAAACGGGCGAGCCAAAATaGATCCTGGGGAGGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PHGKREVRGRLKYCTVLETGEPK*ILGREV Trigger: AACCTCCCTCCCCAGGATCCATTTTGGCTCGCCCGT...TTCCAAGACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR TCA 90 bp | AGATCACTGACGGGCGAGCCAAAATGGATCCTGGGGAGGGAGGTTTGGGAGACATGCTTTCTCTTGCTCTaGGGGATAGGCGTTGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: RSLTGEPKWILGREVWETCFLLL*GIGVVS Trigger: AGATACAACGCCTATCCCTCAGAGCAAGAGAAAGCA...TGTCTCCCAAACCTCCCTCCCCAGGATCCATTTTGGCTCGCCCGTCAGTGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000156484.2 ENSMUST00000186358.6 |
||
| CDS-3UTR TCA 90 bp | TACTCATTAGACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAATAGAGCTAGCTTCTaGAATCTTGGCCCCACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: YSLDCRWASHSTWEERGANRASF*NLGPTA Trigger: CGCCGTGGGGCCAAGATTTCAGAAGCTAGCTCTATT...CGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTCTAATGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGTCTCTGCCGCTCGTTTaGGTGCAACATCCACTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WASHSTWEERGARASKVLSLPLV*VQHPLE Trigger: TTCTAGTGGATGTTGCACTCAAACGAGCGGCAGAGA...CAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR GCA 90 bp | CCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCTTGGAACTCTCCTCCTTCTCTTaGCAGAGGCTGCTGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PHGKREVRGRLKYCTVLELSSFS*QRLLMR Trigger: CCTCATCAGCAGCCTCTGGCAAGAGAAGGAGGAGAG...TTCCAAGACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
||
| CDS-3UTR GCA 90 bp | CCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCCTGAAGCTCCATCTCTaGCGCTCGTTTGAGTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PIPHGKREVRGRLKYCTVLKLHL*RSFECN Trigger: GTTGCACTCAAACGAGCGGCAGAGATGGAGCTTCAG...GACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR GCA 90 bp | TACTCATTAGACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGCTGAAGCTCCATCTCTaGCGCTCGTTTGAGTGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: YSLDCRWASHSTWEERGALKLHL*RSFECN Trigger: GTTGCACTCAAACGAGCGGCAGAGATGGAGCTTCAG...CGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTCTAATGAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR GCA 90 bp | TACTCATTAGACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGGTCACTGCCAGATGCTaGAACAAGACCTTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YSLDCRWASHSTWEERGAVTARC*NKTFQL Trigger: GAGCTGGAAGGTCTTGTTGCAGCATCTGGCAGTGAC...CGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTCTAATGAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166395.9 |
||
| CDS-3UTR CCA 90 bp | CCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCTTGGAATCTGGACTGACTCCTTaGGCAGATTGCCTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PHGKREVRGRLKYCTVLESGLTP*ADCLSS Trigger: GGAGGAGAGGCAATCTGCCCAAGGAGTCAGTCCAGA...TTCCAAGACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
||
| CDS-3UTR CCA 90 bp | TACTCATTAGACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGTCCCTAGGGTTGGGTTaGGTCCAACTACGCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YSLDCRWASHSTWEERGASLGLG*VQLRRN Trigger: ATTCCTGCGTAGTTGGACCCAACCCAACCCTAGGGA...CGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTCTAATGAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR CCA 90 bp | TACTCATTAGACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGCCAAAATGGATCCTaGGGAGGGAGGTTTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YSLDCRWASHSTWEERGASQNGS*GGRFGR Trigger: TCTCCCAAACCTCCCTCCCCAGGATCCATTTTGGCT...CGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTCTAATGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR CCA 90 bp | GACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAATCCACTAAAATCCTaGTTGAGGTCTGGTGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: DCRWASHSTWEERGARASNPLKS*LRSGGV Trigger: TACTCCACCAGACCTCAACCAGGATTTTAGTGGATT...AGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR TCA 90 bp | CCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCTTGGAAAATAGAGCTAGCTTCTaGAATCTTGGCCCCACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PHGKREVRGRLKYCTVLENRASF*NLGPTA Trigger: CGCCGTGGGGCCAAGATTTCAGAAGCTAGCTCTATT...TTCCAAGACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR GCA 90 bp | GGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTTGCTGGGTGCTATTTaGGGTACATCTGTACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGRPIPHGKREVRGRLKYLLGAI*GTSVLC Trigger: ACAGAGTACAGATGTACCGCAAATAGCACCCAGCAA...ATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR GCA 90 bp | AGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCTGGGTGCTATTTaGGGTACATCTGTACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RWASHSTWEERGARASKVLLGAI*GTSVLC Trigger: ACAGAGTACAGATGTACCGCAAATAGCACCCAGCAA...TACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR GCA 90 bp | CCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCAGAGTCACTGCCAGATaGTGCAACAAGACCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PIPHGKREVRGRLKYCTVRVTAR*CNKTFQ Trigger: CTGGAAGGTCTTGTTGCAGCATCTGGCAGTGACTCT...GACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166395.9 |
||
| CDS-3UTR CCA 90 bp | CCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCTTGGAAGACAGGTGTGTCTGCTaGGACAGCAGTGCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PHGKREVRGRLKYCTVLEDRCVC*DSSAFS Trigger: AGAGAAAGCACTGCTGTCCCAGCAGACACACCTGTC...TTCCAAGACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
||
| CDS-3UTR CCA 90 bp | CCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCTTGGAATCCCTAGGGTTGGGTTaGGTCCAACTACGCAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PHGKREVRGRLKYCTVLESLGLG*VQLRRN Trigger: ATTCCTGCGTAGTTGGACCCAACCCAACCCTAGGGA...TTCCAAGACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR TCA 90 bp | CCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCTGCTTTCTCTTGCTCTaGGGGATAGGCGTTGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: PIPHGKREVRGRLKYCTVCFLLL*GIGVVS Trigger: AGATACAACGCCTATCCCTCAGAGCAAGAGAAAGCA...GACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
||
| CDS-3UTR TCA 90 bp | TACTCATTAGACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGTGCTTTCTCTTGCTCTaGGGGATAGGCGTTGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: YSLDCRWASHSTWEERGACFLLL*GIGVVS Trigger: AGATACAACGCCTATCCCTCAGAGCAAGAGAAAGCA...CGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTCTAATGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
||
| CDS-3UTR TCA 90 bp | AAAGTTTACTCATTAGACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGCTGTGAGTTTGGCCTaGAGCTCCATCTCTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KVYSLDCRWASHSTWEERAVSLA*SSISAA Trigger: AGCGGCAGAGATGGAGCTTCAGGCCAAACTCACAGC...TCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTCTAATGAGTAAACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR GCA 90 bp | TACTCATTAGACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGAGTCACTGCCAGATaGTGCAACAAGACCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YSLDCRWASHSTWEERGARVTAR*CNKTLL Trigger: AAGAAGGGTCTTGTTGCAGCATCTGGCAGTGACTCT...CGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTCTAATGAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059775.15 ENSMUST00000186358.6 |
||
| CDS-3UTR CCA 90 bp | GGTGTCTGTAAAGTTGCTGGGTGCTATTTGCGGTACATCTGTACTCTGTCCCACGACAGGTGTGTCTGCTaGGACAGCAGTGCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GVCKVAGCYLRYICTLSHDRCVC*DSSAFS Trigger: AGAGAAAGCACTGCTGTCCCAGCAGACACACCTGTC...GTGGGACAGAGTACAGATGTACCGCAAATAGCACCCAGCAACTTTACAGACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000156484.2 ENSMUST00000186358.6 |
||
| CDS-3UTR CCA 90 bp | AAAGTTTACTCATTAGACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGACTGGGGAGGGAGGTTTaGGAGACACTGGTCTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: KVYSLDCRWASHSTWEERLGREV*ETLVSL Trigger: TAGGGAGACCAGTGTCTCCCAAACCTCCCTCCCCAG...TCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTCTAATGAGTAAACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR CCA 90 bp | GGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATAATCCACTAAAATCCTaGTTGAGGTCTGGTGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: GGRPIPHGKREVRGRLKYNPLKS*LRSGGV Trigger: TACTCCACCAGACCTCAACCAGGATTTTAGTGGATT...ATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR TCA 90 bp | AAAGTTTACTCATTAGACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAAATAGAGCTAGCTTCTaGAATCTTGGCCCCACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KVYSLDCRWASHSTWEERNRASF*NLGPTA Trigger: CGCCGTGGGGCCAAGATTTCAGAAGCTAGCTCTATT...TCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTCTAATGAGTAAACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR TCA 90 bp | TATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATCACATGCCCACACCAATCGGCTaGCAGAGAGAGAAAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YCTVLEHKEEESGGEDHMPTPIG*QREKGP Trigger: TGGGCCTTTCTCTCTCTGTCAGCCGATTGGTGTGGG...CATGTGATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR CCA 90 bp | TATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATCACATGCTGGGGAGGGAGGTTTaGGAGACACTGGTCTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: YCTVLEHKEEESGGEDHMLGREV*ETLVSL Trigger: TAGGGAGACCAGTGTCTCCCAAACCTCCCTCCCCAG...CATGTGATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR CCA 90 bp | TATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATCACATGACGGGCGAGCCAAAATaGATCCTGGGGAGGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: YCTVLEHKEEESGGEDHMTGEPK*ILGREV Trigger: AACCTCCCTCCCCAGGATCCATTTTGGCTCGCCCGT...CATGTGATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR CCA 90 bp | TACTCATTAGACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAATCCACTAAAATCCTaGTTGAGGTCTGGTGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: YSLDCRWASHSTWEERGANPLKS*LRSGGV Trigger: TACTCCACCAGACCTCAACCAGGATTTTAGTGGATT...CGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTCTAATGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR TCA 90 bp | CTAAAGTATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATGCTGTGAGTTTGGCCTaGAGCTCCATCTCTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKYCTVLEHKEEESGGEDAVSLA*SSISAA Trigger: AGCGGCAGAGATGGAGCTTCAGGCCAAACTCACAGC...ATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATACTTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR GCA 90 bp | TATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATCACATGGTGGACAGGTGTGTCTaGTGGGACAGCAGTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YCTVLEHKEEESGGEDHMVDRCV*WDSSAF Trigger: GAAAGCACTGCTGTCCCAGCAGACACACCTGTCCAC...CATGTGATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| CDS-3UTR CCA 90 bp | TATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATCACATGTCTGGACTGACTCCTTaGGCAGATTGCCTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YCTVLEHKEEESGGEDHMSGLTP*ADCLSS Trigger: GGAGGAGAGGCAATCTGCCCAAGGAGTCAGTCCAGA...CATGTGATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| CDS-3UTR CCA 90 bp | CCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCTTGGAAAATCCACTAAAATCCTaGTTGAGGTCTGGTGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PHGKREVRGRLKYCTVLENPLKS*LRSGGV Trigger: TACTCCACCAGACCTCAACCAGGATTTTAGTGGATT...TTCCAAGACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR GCA 90 bp | AAAGTTTACTCATTAGACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAAGAGTCACTGCCAGATaGTGCAACAAGACCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KVYSLDCRWASHSTWEERRVTAR*CNKTLL Trigger: AAGAAGGGTCTTGTTGCAGCATCTGGCAGTGACTCT...TCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTCTAATGAGTAAACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059775.15 ENSMUST00000186358.6 |
||
| CDS-3UTR GCA 90 bp | CTAAAGTATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATGTGGACAGGTGTGTCTaGTGGGACAGCAGTGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKYCTVLEHKEEESGGEDVDRCV*WDSSAF Trigger: GAAAGCACTGCTGTCCCAGCAGACACACCTGTCCAC...ATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATACTTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| CDS-3UTR CCA 90 bp | CTAAAGTATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATTCTGGACTGACTCCTTaGGCAGATTGCCTCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKYCTVLEHKEEESGGEDSGLTP*ADCLSS Trigger: GGAGGAGAGGCAATCTGCCCAAGGAGTCAGTCCAGA...ATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATACTTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| CDS-3UTR CCA 90 bp | AGTATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATCACAGACAGGTGTGTCTGCTaGGACAGCAGTGCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SIAQSWNIKKRSLEEKITDRCVC*DSSAFS Trigger: AGAGAAAGCACTGCTGTCCCAGCAGACACACCTGTC...TGTGATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| CDS-3UTR CCA 90 bp | TATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATCACATGGACAGGTGTGTCTGCTaGGACAGCAGTGCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YCTVLEHKEEESGGEDHMDRCVC*DSSAFS Trigger: AGAGAAAGCACTGCTGTCCCAGCAGACACACCTGTC...CATGTGATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| CDS-3UTR CCA 90 bp | TATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATCACATGAGCCAAAATGGATCCTaGGGAGGGAGGTTTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YCTVLEHKEEESGGEDHMSQNGS*GGRFGR Trigger: TCTCCCAAACCTCCCTCCCCAGGATCCATTTTGGCT...CATGTGATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
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| CDS-3UTR TCA 90 bp | CTAAAGTATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATAATAGAGCTAGCTTCTaGAATCTTGGCCCCACGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LKYCTVLEHKEEESGGEDNRASF*NLGPTA Trigger: CGCCGTGGGGCCAAGATTTCAGAAGCTAGCTCTATT...ATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATACTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR GCA 90 bp | TATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATCACATGGTCACTGCCAGATGCTaGAACAAGACCCTTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YCTVLEHKEEESGGEDHMVTARC*NKTLLA Trigger: AGCAAGAAGGGTCTTGTTGCAGCATCTGGCAGTGAC...CATGTGATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000059775.15 ENSMUST00000186358.6 |
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| CDS-3UTR CCA 90 bp | CTAAAGTATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATGACAGGTGTGTCTGCTaGGACAGCAGTGCTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKYCTVLEHKEEESGGEDDRCVC*DSSAFS Trigger: AGAGAAAGCACTGCTGTCCCAGCAGACACACCTGTC...ATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATACTTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| CDS-3UTR TCA 90 bp | AGTATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATCACATGCTTTCTCTTGCTCTaGGGGATAGGCGTTGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: SIAQSWNIKKRSLEEKITCFLLL*GIGVVS Trigger: AGATACAACGCCTATCCCTCAGAGCAAGAGAAAGCA...TGTGATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 ENSMUST00000186358.6 |
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| CDS-3UTR GCA 90 bp | CTAAAGTATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATTTGCTGGGTGCTATTTaGGGTACATCTGTACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LKYCTVLEHKEEESGGEDLLGAI*GTSVLC Trigger: ACAGAGTACAGATGTACCGCAAATAGCACCCAGCAA...ATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATACTTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
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| CDS CCA 90 bp | ACAACCCTGGGCCTGGGGGCCGAGATCACCCGTCCCTCTACGCGCTaGCGGAACCCAGAAGCAGGGTCATGCCTGCCTGCCCGTGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: TTLGLGAEITRPSTR*RNPEAGSCLPARGE Trigger: CTCGCCACGGGCAGGCAGGCATGACCCTGCTTCTGGGTTCCGCCAGCGCGTAGAGGGACGGGTGATCTCGGCCCCCAGGCCCAGGGTTGT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166395.9 |
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| CDS CCA 90 bp | TGCCAGATGCTGCAACAAGACCTTCCAGCTCCACAACCCTGGGCCTaGGGGCCGAGATCACCCGTCCCTCTACGCGCTGGCGGAACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CQMLQQDLPAPQPWA*GPRSPVPLRAGGTQ Trigger: CTGGGTTCCGCCAGCGCGTAGAGGGACGGGTGATCTCGGCCCCCAGGCCCAGGGTTGTGGAGCTGGAAGGTCTTGTTGCAGCATCTGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166395.9 |
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| CDS-3UTR CAA 90 bp | GACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTCCTGGGGAGGGAGGTTaGGGAGACACTGGTCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: DCRWASHSTWEERGARASPGEGG*GDTGLP Trigger: AGGGAGACCAGTGTCTCCCAAACCTCCCTCCCCAGG...AGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR CAA 90 bp | GACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTCTGGTCTCCCTAGGGTaGGGTTGGGTCCAACTACGC | + |
|
Preference number: 5 (lower is better) Translates to: DCRWASHSTWEERGARASLVSLG*GWVQLR Trigger: GCGTAGTTGGACCCAACCCAACCCTAGGGAGACCAG...AGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATCCTGGGGAGGGAGGTTaGGGAGACACTGGTCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GGRPIPHGKREVRGRLKYPGEGG*GDTGLP Trigger: AGGGAGACCAGTGTCTCCCAAACCTCCCTCCCCAGG...ATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR CAA 90 bp | TACTCATTAGACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGCCTGGGGAGGGAGGTTaGGGAGACACTGGTCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: YSLDCRWASHSTWEERGAPGEGG*GDTGLP Trigger: AGGGAGACCAGTGTCTCCCAAACCTCCCTCCCCAGG...CGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTCTAATGAGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR CAA 90 bp | GACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTCCACTAAAATCCTGGTaGAGGTCTGGTGGAGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: DCRWASHSTWEERGARASPLKSW*RSGGVG Trigger: CCCTACTCCACCAGACCTCAACCAGGATTTTAGTGG...AGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATGACCACTCTGAGGGTTaGGACTGGGTCCAGATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GGRPIPHGKREVRGRLKYDHSEG*DWVQIC Trigger: GCAAATCTGGACCCAGTCCAAACCCTCAGAGTGGTC...ATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR CAA 90 bp | CCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCTTGGAACTGGTCTCCCTAGGGTaGGGTTGGGTCCAACTACGC | + |
|
Preference number: 5 (lower is better) Translates to: PHGKREVRGRLKYCTVLELVSLG*GWVQLR Trigger: GCGTAGTTGGACCCAACCCAACCCTAGGGAGACCAG...TTCCAAGACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR CAA 90 bp | TACTCATTAGACTGTAGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGCTAGCTTCTGAAATCTaGGCCCCACGGCGGGAAATC | + |
|
Preference number: 5 (lower is better) Translates to: YSLDCRWASHSTWEERGALASEI*APRREI Trigger: GATTTCCCGCCGTGGGGCCAAGATTTCAGAAGCTAG...CGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCTACAGTCTAATGAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGGGCGTCCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTAGAGGTGTCTGTAAAGTaGCTGGGTGCTATTTGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: RWASHSTWEERGARASKVEVSVK*LGAICG Trigger: ACCGCAAATAGCACCCAGCAACTTTACAGACACCTC...TACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGGACGCCCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
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| CDS-3UTR CAA 90 bp | CCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCGACCACTCTGAGGGTTaGGACTGGGTCCAGATTTGC | + |
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Preference number: 5 (lower is better) Translates to: PIPHGKREVRGRLKYCTVDHSEG*DWVQIC Trigger: GCAAATCTGGACCCAGTCCAAACCCTCAGAGTGGTC...GACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
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| CDS-3UTR CAA 90 bp | CCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCTTGGAACTAGCTTCTGAAATCTaGGCCCCACGGCGGGAAATC | + |
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Preference number: 5 (lower is better) Translates to: PHGKREVRGRLKYCTVLELASEI*APRREI Trigger: GATTTCCCGCCGTGGGGCCAAGATTTCAGAAGCTAG...TTCCAAGACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
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| CDS-3UTR CAA 90 bp | CCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCTTGGAAGACCACTCTGAGGGTTaGGACTGGGTCCAGATTTGC | + |
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Preference number: 5 (lower is better) Translates to: PHGKREVRGRLKYCTVLEDHSEG*DWVQIC Trigger: GCAAATCTGGACCCAGTCCAAACCCTCAGAGTGGTC...TTCCAAGACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
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| CDS-3UTR CAA 90 bp | CCCATTCCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCGAGGTGTCTGTAAAGTaGCTGGGTGCTATTTGCGGT | + |
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Preference number: 5 (lower is better) Translates to: PIPHGKREVRGRLKYCTVEVSVK*LGAICG Trigger: ACCGCAAATAGCACCCAGCAACTTTACAGACACCTC...GACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGGAATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
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| CDS-3UTR CAA 90 bp | AGTATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATCACACCTGGGGAGGGAGGTTaGGGAGACACTGGTCTCCCT | + |
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Preference number: 5 (lower is better) Translates to: SIAQSWNIKKRSLEEKITPGEGG*GDTGLP Trigger: AGGGAGACCAGTGTCTCCCAAACCTCCCTCCCCAGG...TGTGATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
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| CDS-3UTR CAA 90 bp | CCACATGGGAAGAGAGAGGTGCGAGGGCGTCTAAAGTATTGCACAGTCTTGGAAGAGGTGTCTGTAAAGTaGCTGGGTGCTATTTGCGGT | + |
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Preference number: 5 (lower is better) Translates to: PHGKREVRGRLKYCTVLEEVSVK*LGAICG Trigger: ACCGCAAATAGCACCCAGCAACTTTACAGACACCTC...TTCCAAGACTGTGCAATACTTTAGACGCCCTCGCACCTCTCTCTTCCCATGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
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| CDS-3UTR CAA 90 bp | AGTATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATCACACTGGTCTCCCTAGGGTaGGGTTGGGTCCAACTACGC | + |
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Preference number: 5 (lower is better) Translates to: SIAQSWNIKKRSLEEKITLVSLG*GWVQLR Trigger: GCGTAGTTGGACCCAACCCAACCCTAGGGAGACCAG...TGTGATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
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| CDS-3UTR CAA 90 bp | AGTATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATCACACTAGCTTCTGAAATCTaGGCCCCACGGCGGGAAATC | + |
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Preference number: 5 (lower is better) Translates to: SIAQSWNIKKRSLEEKITLASEI*APRREI Trigger: GATTTCCCGCCGTGGGGCCAAGATTTCAGAAGCTAG...TGTGATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
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| CDS-3UTR CAA 90 bp | AGTATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATCACAGACCACTCTGAGGGTTaGGACTGGGTCCAGATTTGC | + |
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Preference number: 5 (lower is better) Translates to: SIAQSWNIKKRSLEEKITDHSEG*DWVQIC Trigger: GCAAATCTGGACCCAGTCCAAACCCTCAGAGTGGTC...TGTGATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
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| CDS-3UTR CAA 90 bp | CTAAAGTATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATCTAGCTTCTGAAATCTaGGCCCCACGGCGGGAAATC | + |
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Preference number: 5 (lower is better) Translates to: LKYCTVLEHKEEESGGEDLASEI*APRREI Trigger: GATTTCCCGCCGTGGGGCCAAGATTTCAGAAGCTAG...ATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATACTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
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| CDS-3UTR CAA 90 bp | CTAAAGTATTGCACAGTCTTGGAACATAAAGAAGAGGAGTCTGGAGGAGAAGATCCACTAAAATCCTGGTaGAGGTCTGGTGGAGTAGGG | + |
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Preference number: 5 (lower is better) Translates to: LKYCTVLEHKEEESGGEDPLKSW*RSGGVG Trigger: CCCTACTCCACCAGACCTCAACCAGGATTTTAGTGG...ATCTTCTCCTCCAGACTCCTCTTCTTTATGTTCCAAGACTGTGCAATACTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000059775.15 ENSMUST00000118283.8 ENSMUST00000166395.9 ENSMUST00000172229.8 |
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| CDS CCA 72 bp | GGCCTGGGGGCCGAGATCACCCGTCCCTCTACGCGCTaGCGGAACCCAGAAGCAGGGTCATGCCTGCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: GLGAEITRPSTR*RNPEAGSCLPA Trigger: GGCAGGCAGGCATGACCCTGCTTCTGGGTTCCGCCAGCGCGTAGAGGGACGGGTGATCTCGGCCCCCAGGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166395.9 |
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| CDS CCA 72 bp | CTGCAACAAGACCTTCCAGCTCCACAACCCTGGGCCTaGGGGCCGAGATCACCCGTCCCTCTACGCGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: LQQDLPAPQPWA*GPRSPVPLRAG Trigger: GCCAGCGCGTAGAGGGACGGGTGATCTCGGCCCCCAGGCCCAGGGTTGTGGAGCTGGAAGGTCTTGTTGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166395.9 |
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| CDS CCA 72 bp | CAGATGCTGCAACAAGACCTTCCAGCTCCACAACCCTaGGCCTGGGGGCCGAGATCACCCGTCCCTCTACGC | + |
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Preference number: 6 (lower is better) Translates to: QMLQQDLPAPQP*AWGPRSPVPLR Trigger: GCGTAGAGGGACGGGTGATCTCGGCCCCCAGGCCCAGGGTTGTGGAGCTGGAAGGTCTTGTTGCAGCATCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166395.9 |
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