RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TGFBRAP1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000070939

Ensembl transcript IDs: ENSMUST00000095014.8, ENSMUST00000186694.7, ENSMUST00000188728.2, ENSMUST00000189010.2

Found 366 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTGAAGAGCACACCACCTCAAAGGCAAGGTGCCCAGCTCAGCTCTaGACCCTAGACACAGGCAGACCCCATTTCCAGGCCCCACTGTGT +
Preference number: 1 (lower is better)
Translates to: CEEHTTSKARCPAQL*TLDTGRPHFQAPLC
Trigger: ACACAGTGGGGCCTGGAAATGGGGTCTGCCTGTGTCTAGGGTGCAGAGCTGAGCTGGGCACCTTGCCTTTGAGGTGGTGTGCTCTTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CCA 90 bp CCTGCTCTTCTAAGTTGGCTTGTGCTTTGGATGACTGTAGCCTCCTaGACAGGGAGACTCTGGCCTGTCACTGTCCTGGGTGGGGAGGGA +
Preference number: 1 (lower is better)
Translates to: PALLSWLVLWMTVAS*TGRLWPVTVLGGEG
Trigger: TCCCTCCCCACCCAGGACAGTGACAGGCCAGAGTCTCCCTGTCCAGGAGGCTACAGTCATCCAAAGCACAAGCCAACTTAGAAGAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CCA 90 bp TGTAGCCTCCTGGACAGGGAGACTCTGGCCTGTCACTGTCCTGGGTaGGGAGGGAGGGTGTTCAGGCCTTTTCCATTTACATCCACACAA +
Preference number: 1 (lower is better)
Translates to: CSLLDRETLACHCPG*GGRVFRPFPFTSTQ
Trigger: TTGTGTGGATGTAAATGGAAAAGGCCTGAACACCCTCCCTCCCCACCCAGGACAGTGACAGGCCAGAGTCTCCCTGTCCAGGAGGCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR TCA 90 bp GTGTGTGTGTGTGCATGTGTGCGCGTGCGTGCATGTTCTGGGGATTaGATTCAGGTTGTCAGGCTTGGTGGCAAGTGCCTTTGCCCACTG +
Preference number: 1 (lower is better)
Translates to: VCVCACVRVRACSGD*IQVVRLGGKCLCPL
Trigger: CAGTGGGCAAAGGCACTTGCCACCAAGCCTGACAACCTGAATTCAATCCCCAGAACATGCACGCACGCGCACACATGCACACACACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR TCA 90 bp AAGCAAGGACTGCCCCAGTTGTGCAACAGGTGCCGTGTGACAGTGTaGCCCATTTCTCTGTGCTCCAGGAGTGTCAAGCATGGCTCACAG +
Preference number: 1 (lower is better)
Translates to: KQGLPQLCNRCRVTV*PISLCSRSVKHGSQ
Trigger: CTGTGAGCCATGCTTGACACTCCTGGAGCACAGAGAAATGGGTCACACTGTCACACGGCACCTGTTGCACAACTGGGGCAGTCCTTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR TCA 90 bp CAAGCAGGAAGCAAGGACTGCCCCAGTTGTGCAACAGGTGCCGTGTaGCAGTGTGACCCATTTCTCTGTGCTCCAGGAGTGTCAAGCATG +
Preference number: 1 (lower is better)
Translates to: QAGSKDCPSCATGAV*QCDPFLCAPGVSSM
Trigger: CATGCTTGACACTCCTGGAGCACAGAGAAATGGGTCACACTGTCACACGGCACCTGTTGCACAACTGGGGCAGTCCTTGCTTCCTGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CCA 90 bp GAAAGCTCTGGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTaGCCTCCTAAGATCCTACAGAAACACCTGTGGGCAGAACAGGGA +
Preference number: 1 (lower is better)
Translates to: ESSGQAWKVLADKVA*PPKILQKHLWAEQG
Trigger: TCCCTGTTCTGCCCACAGGTGTTTCTGTAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCCAGAGCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR GCA 90 bp ACGTGTGTGTGCACGTGTGTGTGTGTGTGCATGTGTGCGCGTGCGTaGATGTTCTGGGGATTGAATTCAGGTTGTCAGGCTTGGTGGCAA +
Preference number: 1 (lower is better)
Translates to: TCVCTCVCVCMCARA*MFWGLNSGCQAWWQ
Trigger: TTGCCACCAAGCCTGACAACCTGAATTCAATCCCCAGAACATGCACGCACGCGCACACATGCACACACACACACACGTGCACACACACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CCA 90 bp TGCACGTGTGTGTGTGTGTGCATGTGTGCGCGTGCGTGCATGTTCTaGGGATTGAATTCAGGTTGTCAGGCTTGGTGGCAAGTGCCTTTG +
Preference number: 1 (lower is better)
Translates to: CTCVCVCMCARACMF*GLNSGCQAWWQVPL
Trigger: CAAAGGCACTTGCCACCAAGCCTGACAACCTGAATTCAATCCCCAGAACATGCACGCACGCGCACACATGCACACACACACACACGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CCA 90 bp TTCAGGAAAGCTCTGGGCAGGCATGGAAAGTGCTGGCAGATAAGGTaGCCTGGCCTCCTAAGATCCTACAGAAACACCTGTGGGCAGAAC +
Preference number: 1 (lower is better)
Translates to: FRKALGRHGKCWQIR*PGLLRSYRNTCGQN
Trigger: GTTCTGCCCACAGGTGTTTCTGTAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCCAGAGCTTTCCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CCA 90 bp TGTGACAGTGTGACCCATTTCTCTGTGCTCCAGGAGTGTCAAGCATaGCTCACAGGAGCCTCTCTCTCTCAGCTCTGTGTTCAAACCCAG +
Preference number: 1 (lower is better)
Translates to: CDSVTHFSVLQECQA*LTGASLSQLCVQTQ
Trigger: CTGGGTTTGAACACAGAGCTGAGAGAGAGAGGCTCCTGTGAGCCATGCTTGACACTCCTGGAGCACAGAGAAATGGGTCACACTGTCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR TCA 90 bp ATGACAGATACCAAGTCCAGTTGGTCACAGATGAGACCTTTCCTCTaGGGGTTCAGGAAAGCTCTGGGCAGGCATGGAAAGTGCTGGCAG +
Preference number: 1 (lower is better)
Translates to: MTDTKSSWSQMRPFL*GFRKALGRHGKCWQ
Trigger: CTGCCAGCACTTTCCATGCCTGCCCAGAGCTTTCCTGAACCCTCAGAGGAAAGGTCTCATCTGTGACCAACTGGACTTGGTATCTGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR GCA 90 bp AGAAACCTGCTTCTGGGCCCTCATAAACCTGGGTCTCTTTTCTGTTaGAGTCTTCAGGACAGGCAAAGCAGCTCCCCACTTAGACCTCTC +
Preference number: 1 (lower is better)
Translates to: RNLLLGPHKPGSLFC*SLQDRQSSSPLRPL
Trigger: GAGAGGTCTAAGTGGGGAGCTGCTTTGCCTGTCCTGAAGACTGCAACAGAAAAGAGACCCAGGTTTATGAGGGCCCAGAAGCAGGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CCA 90 bp CGTGCGTGCATGTTCTGGGGATTGAATTCAGGTTGTCAGGCTTGGTaGCAAGTGCCTTTGCCCACTGAATCATTTCACCGTCCCATCTAC +
Preference number: 1 (lower is better)
Translates to: RACMFWGLNSGCQAW*QVPLPTESFHRPIY
Trigger: GTAGATGGGACGGTGAAATGATTCAGTGGGCAAAGGCACTTGCCACCAAGCCTGACAACCTGAATTCAATCCCCAGAACATGCACGCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CCA 90 bp CACCACCCTGGGGGTGGCTCTGAGACTTCAAAGAGAGCAGGGAAATaGCAAGAGCTGCAGTTTGTCTGTGACAATGACAGATACCAAGTC +
Preference number: 1 (lower is better)
Translates to: HHPGGGSETSKRAGK*QELQFVCDNDRYQV
Trigger: GACTTGGTATCTGTCATTGTCACAGACAAACTGCAGCTCTTGCCATTTCCCTGCTCTCTTTGAAGTCTCAGAGCCACCCCCAGGGTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR TCA 90 bp AGAACAGAAGCTATGTCCACTTTAGGGGCAGATGTGAAGACTATGTaGAGAGCACACCACCTCAAAGGCAAGGTGCCCAGCTCAGCTCTG +
Preference number: 1 (lower is better)
Translates to: RTEAMSTLGADVKTM*RAHHLKGKVPSSAL
Trigger: CAGAGCTGAGCTGGGCACCTTGCCTTTGAGGTGGTGTGCTCTTCACATAGTCTTCACATCTGCCCCTAAAGTGGACATAGCTTCTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR TCA 90 bp GTGAGCAGTCACAAGTCCTTTCTGAGACTGCACCCGTTCTGCGCATaGAAAACAGCGCTTTCAGATGAAACCGCCAATTCATGGGCTGTA +
Preference number: 1 (lower is better)
Translates to: VSSHKSFLRLHPFCA*KTALSDETANSWAV
Trigger: TACAGCCCATGAATTGGCGGTTTCATCTGAAAGCGCTGTTTTTCATGCGCAGAACGGGTGCAGTCTCAGAAAGGACTTGTGACTGCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR GCA 90 bp GGGGTGGCTCTGAGACTTCAAAGAGAGCAGGGAAATGGCAAGAGCTaGAGTTTGTCTGTGACAATGACAGATACCAAGTCCAGTTGGTCA +
Preference number: 1 (lower is better)
Translates to: GVALRLQREQGNGKS*SLSVTMTDTKSSWS
Trigger: TGACCAACTGGACTTGGTATCTGTCATTGTCACAGACAAACTGCAGCTCTTGCCATTTCCCTGCTCTCTTTGAAGTCTCAGAGCCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CCA 90 bp GGAAAGGGGCGCAGTCCTCTGAACACTCAAGACGCTTCTACTCCCTaGCTTACTGGGAATCCCAAAGGGACAAGAAATACACCAATCATT +
Preference number: 1 (lower is better)
Translates to: GKGRSPLNTQDASTP*LTGNPKGTRNTPII
Trigger: AATGATTGGTGTATTTCTTGTCCCTTTGGGATTCCCAGTAAGCCAGGGAGTAGAAGCGTCTTGAGTGTTCAGAGGACTGCGCCCCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CCA 90 bp GCGCAGTCCTCTGAACACTCAAGACGCTTCTACTCCCTGGCTTACTaGGAATCCCAAAGGGACAAGAAATACACCAATCATTGTAAGTGC +
Preference number: 1 (lower is better)
Translates to: AQSSEHSRRFYSLAY*ESQRDKKYTNHCKC
Trigger: GCACTTACAATGATTGGTGTATTTCTTGTCCCTTTGGGATTCCCAGTAAGCCAGGGAGTAGAAGCGTCTTGAGTGTTCAGAGGACTGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR GCA 90 bp TACTGGGAATCCCAAAGGGACAAGAAATACACCAATCATTGTAAGTaGAGAGATCCTTTTGTCAAGAATGGACAGGGAATGGGGGTGGGC +
Preference number: 1 (lower is better)
Translates to: YWESQRDKKYTNHCK*RDPFVKNGQGMGVG
Trigger: GCCCACCCCCATTCCCTGTCCATTCTTGACAAAAGGATCTCTGCACTTACAATGATTGGTGTATTTCTTGTCCCTTTGGGATTCCCAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR TCA 90 bp TACATTAACACAGGTAAGCAACAGCAGATAGACAATTCCCAAAACTaGACATTCCTGCTCCCTTCCAGATACGAATGTGACCCAAGCTCA +
Preference number: 1 (lower is better)
Translates to: YINTGKQQQIDNSQN*TFLLPSRYECDPSS
Trigger: TGAGCTTGGGTCACATTCGTATCTGGAAGGGAGCAGGAATGTTCAGTTTTGGGAATTGTCTATCTGCTGTTGCTTACCTGTGTTAATGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CCA 90 bp TGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGTTGTGCAACAGGTGCCGTGGCAGATGGGCTGGGTaGGGTGTGTTCTGGGGCCGC +
Preference number: 2 (lower is better)
Translates to: CGIASRKQGLPQLCNRCRGRWAG*GVFWGR
Trigger: GCGGCCCCAGAACACACCCCACCCAGCCCATCTGCC...ACGGCACCTGTTGCACAACTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR GCA 90 bp GCTAGGAGGACAGATTCCTGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGAGCCGCTCTCCCAGCTaGCAGCTACAGGCTACAGGG +
Preference number: 2 (lower is better)
Translates to: ARRTDSCGIASRKQGLPQSRSPS*QLQATG
Trigger: CCCTGTAGCCTGTAGCTGGCAGCTGGGAGAGCGGCT...CTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACAGGAATCTGTCCTCCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CCA 90 bp TCCCCCACATTAGGAGTGAGCAGTCACAAGTCCTTTCTGAGACTGCACCCGTTCGGCAGATGGGCTGGGTaGGGTGTGTTCTGGGGCCGC +
Preference number: 2 (lower is better)
Translates to: SPTLGVSSHKSFLRLHPFGRWAG*GVFWGR
Trigger: GCGGCCCCAGAACACACCCCACCCAGCCCATCTGCC...GAACGGGTGCAGTCTCAGAAAGGACTTGTGACTGCTCACTCCTAATGTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CCA 90 bp GCTAGGAGGACAGATTCCTGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGGACAGGGAATGGGGGTaGGCAGGGTCTGGCAGATGG +
Preference number: 2 (lower is better)
Translates to: ARRTDSCGIASRKQGLPQDREWG*AGSGRW
Trigger: CCATCTGCCAGACCCTGCCCACCCCCATTCCCTGTC...CTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACAGGAATCTGTCCTCCTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR GCA 90 bp CCCATTTCTCTGTGCTCCAGGAGTGTCAAGCATGGCTCACAGGAGCCTCTCTCTAGCCGCTCTCCCAGCTaGCAGCTACAGGCTACAGGG +
Preference number: 2 (lower is better)
Translates to: PISLCSRSVKHGSQEPLSSRSPS*QLQATG
Trigger: CCCTGTAGCCTGTAGCTGGCAGCTGGGAGAGCGGCT...AGAGAGAGGCTCCTGTGAGCCATGCTTGACACTCCTGGAGCACAGAGAAATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CCA 90 bp TGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGTTGTGCAACAGGTGCCGTTGTCACTGTCCTGGGTaGGGAGGGAGGGTGTTCAGG +
Preference number: 2 (lower is better)
Translates to: CGIASRKQGLPQLCNRCRCHCPG*GGRVFR
Trigger: CCTGAACACCCTCCCTCCCCACCCAGGACAGTGACA...ACGGCACCTGTTGCACAACTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CCA 90 bp CCCATTTCTCTGTGCTCCAGGAGTGTCAAGCATGGCTCACAGGAGCCTCTCTCTAGGATTTGGTGGTGGTaGTGGTGGGGCGGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: PISLCSRSVKHGSQEPLSRIWWW*WWGGWA
Trigger: AGCCCAGCCGCCCCACCACCACCACCACCAAATCCT...AGAGAGAGGCTCCTGTGAGCCATGCTTGACACTCCTGGAGCACAGAGAAATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CCA 90 bp TCCCCCACATTAGGAGTGAGCAGTCACAAGTCCTTTCTGAGACTGCACCCGTTCGCAGGGTCTGGCAGATaGGCTGGGTGGGGTGTGTTC +
Preference number: 2 (lower is better)
Translates to: SPTLGVSSHKSFLRLHPFAGSGR*AGWGVF
Trigger: GAACACACCCCACCCAGCCCATCTGCCAGACCCTGC...GAACGGGTGCAGTCTCAGAAAGGACTTGTGACTGCTCACTCCTAATGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR GCA 90 bp CCCATTTCTCTGTGCTCCAGGAGTGTCAAGCATGGCTCACAGGAGCCTCTCTCTACCTCAAAGGCAAGGTaGCCAGCTCAGCTCTGCACC +
Preference number: 2 (lower is better)
Translates to: PISLCSRSVKHGSQEPLSTSKAR*PAQLCT
Trigger: GGTGCAGAGCTGAGCTGGGCACCTTGCCTTTGAGGT...AGAGAGAGGCTCCTGTGAGCCATGCTTGACACTCCTGGAGCACAGAGAAATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR GCA 90 bp TACAGGGCAGAGGCCAGTGTGAGCCTCTCCTGGAAGGCTCACTGGTTTACTGATACGTGTGTGTGTGTGTaGATGTGTGCGCGTGCGTGC +
Preference number: 2 (lower is better)
Translates to: YRAEASVSLSWKAHWFTDTCVCV*MCARAC
Trigger: GCACGCACGCGCACACATGCACACACACACACACGT...ATCAGTAAACCAGTGAGCCTTCCAGGAGAGGCTCACACTGGCCTCTGCCCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR TCA 90 bp CCCATTTCTCTGTGCTCCAGGAGTGTCAAGCATGGCTCACAGGAGCCTCTCTCTCGGCAGCCCGGGAGATaGTGCTTCTTTTCCAAGCAT +
Preference number: 2 (lower is better)
Translates to: PISLCSRSVKHGSQEPLSRQPGR*CFFSKH
Trigger: ATGCTTGGAAAAGAAGCATCATCTCCCGGGCTGCCG...AGAGAGAGGCTCCTGTGAGCCATGCTTGACACTCCTGGAGCACAGAGAAATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR GCA 90 bp TCCCCCACATTAGGAGTGAGCAGTCACAAGTCCTTTCTGAGACTGCACCCGTTCACCTCAAAGGCAAGGTaGCCAGCTCAGCTCTGCACC +
Preference number: 2 (lower is better)
Translates to: SPTLGVSSHKSFLRLHPFTSKAR*PAQLCT
Trigger: GGTGCAGAGCTGAGCTGGGCACCTTGCCTTTGAGGT...GAACGGGTGCAGTCTCAGAAAGGACTTGTGACTGCTCACTCCTAATGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CCA 90 bp TCCCCCACATTAGGAGTGAGCAGTCACAAGTCCTTTCTGAGACTGCACCCGTTCGGGATAGCATCTTCCTaGCACCCAGATGCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: SPTLGVSSHKSFLRLHPFGIASS*HPDASP
Trigger: AGGGGAGGCATCTGGGTGCCAGGAAGATGCTATCCC...GAACGGGTGCAGTCTCAGAAAGGACTTGTGACTGCTCACTCCTAATGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CCA 90 bp CCCATTTCTCTGTGCTCCAGGAGTGTCAAGCATGGCTCACAGGAGCCTCTCTCTAGGCATGGAAAGTGCTaGCAGATAAGGTGGCCTGGC +
Preference number: 2 (lower is better)
Translates to: PISLCSRSVKHGSQEPLSRHGKC*QIRWPG
Trigger: GCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCT...AGAGAGAGGCTCCTGTGAGCCATGCTTGACACTCCTGGAGCACAGAGAAATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CCA 90 bp GCTAGGAGGACAGATTCCTGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGGGTTCAGGAAAGCTCTaGGCAGGCATGGAAAGTGCT +
Preference number: 2 (lower is better)
Translates to: ARRTDSCGIASRKQGLPQGSGKL*AGMESA
Trigger: AGCACTTTCCATGCCTGCCCAGAGCTTTCCTGAACC...CTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACAGGAATCTGTCCTCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CAA 90 bp TGTGTGTGTGTGTGCATGTGTGCGCGTGCGTGCATGTTCTGGGGATaGAATTCAGGTTGTCAGGCTTGGTGGCAAGTGCCTTTGCCCACT +
Preference number: 2 (lower is better)
Translates to: CVCVCMCARACMFWG*NSGCQAWWQVPLPT
Trigger: AGTGGGCAAAGGCACTTGCCACCAAGCCTGACAACCTGAATTCAATCCCCAGAACATGCACGCACGCGCACACATGCACACACACACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR TCA 90 bp CCCATTTCTCTGTGCTCCAGGAGTGTCAAGCATGGCTCACAGGAGCCTCTCTCTGAGGGTTTCAGAGGTTaGCAGCTGGATGGGAAGAAC +
Preference number: 2 (lower is better)
Translates to: PISLCSRSVKHGSQEPLSEGFRG*QLDGKN
Trigger: GTTCTTCCCATCCAGCTGTCAACCTCTGAAACCCTC...AGAGAGAGGCTCCTGTGAGCCATGCTTGACACTCCTGGAGCACAGAGAAATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR TCA 90 bp AGAGTCACCACCCTGGGGGTGGCTCTGAGACTTCAAAGAGAGCAGGGAAATGGCGAGTGCTTAAGGAAATaGGGCAGAGGGTTTCAGAGG +
Preference number: 2 (lower is better)
Translates to: RVTTLGVALRLQREQGNGECLRK*GRGFQR
Trigger: CCTCTGAAACCCTCTGCCTCATTTCCTTAAGCACTC...GCCATTTCCCTGCTCTCTTTGAAGTCTCAGAGCCACCCCCAGGGTGGTGACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR TCA 90 bp TCCCCCACATTAGGAGTGAGCAGTCACAAGTCCTTTCTGAGACTGCACCCGTTCCGGCAGCCCGGGAGATaGTGCTTCTTTTCCAAGCAT +
Preference number: 2 (lower is better)
Translates to: SPTLGVSSHKSFLRLHPFRQPGR*CFFSKH
Trigger: ATGCTTGGAAAAGAAGCATCATCTCCCGGGCTGCCG...GAACGGGTGCAGTCTCAGAAAGGACTTGTGACTGCTCACTCCTAATGTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR TCA 90 bp TCCCCCACATTAGGAGTGAGCAGTCACAAGTCCTTTCTGAGACTGCACCCGTTCAGGGGCGCAGTCCTCTaGACACTCAAGACGCTTCTA +
Preference number: 2 (lower is better)
Translates to: SPTLGVSSHKSFLRLHPFRGAVL*TLKTLL
Trigger: TAGAAGCGTCTTGAGTGTTCAGAGGACTGCGCCCCT...GAACGGGTGCAGTCTCAGAAAGGACTTGTGACTGCTCACTCCTAATGTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CCA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTAAGTTGGCTTGTGCTTTaGATGACTGTAGCCTCCTGG +
Preference number: 2 (lower is better)
Translates to: GQAWKVLADKVAWPPKILSWLVL*MTVASW
Trigger: CCAGGAGGCTACAGTCATCCAAAGCACAAGCCAACT...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CCA 90 bp AGAGTCACCACCCTGGGGGTGGCTCTGAGACTTCAAAGAGAGCAGGGAAATGGCAGTGTGAGCCTCTCCTaGAAGGCTCACTGGTTTACT +
Preference number: 2 (lower is better)
Translates to: RVTTLGVALRLQREQGNGSVSLS*KAHWFT
Trigger: AGTAAACCAGTGAGCCTTCCAGGAGAGGCTCACACT...GCCATTTCCCTGCTCTCTTTGAAGTCTCAGAGCCACCCCCAGGGTGGTGACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CCA 90 bp GCTAGGAGGACAGATTCCTGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGCTACAGAAACACCTGTaGGCAGAACAGGGAAAAGCC +
Preference number: 2 (lower is better)
Translates to: ARRTDSCGIASRKQGLPQLQKHL*AEQGKA
Trigger: GGCTTTTCCCTGTTCTGCCCACAGGTGTTTCTGTAG...CTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACAGGAATCTGTCCTCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR TCA 90 bp CCCATTTCTCTGTGCTCCAGGAGTGTCAAGCATGGCTCACAGGAGCCTCTCTCTGAGTGCTTAAGGAAATaGGGCAGAGGGTTTCAGAGG +
Preference number: 2 (lower is better)
Translates to: PISLCSRSVKHGSQEPLSECLRK*GRGFQR
Trigger: CCTCTGAAACCCTCTGCCTCATTTCCTTAAGCACTC...AGAGAGAGGCTCCTGTGAGCCATGCTTGACACTCCTGGAGCACAGAGAAATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR TCA 90 bp AGAGTCACCACCCTGGGGGTGGCTCTGAGACTTCAAAGAGAGCAGGGAAATGGCGCATGTTCTGGGGATTaGATTCAGGTTGTCAGGCTT +
Preference number: 2 (lower is better)
Translates to: RVTTLGVALRLQREQGNGACSGD*IQVVRL
Trigger: AAGCCTGACAACCTGAATTCAATCCCCAGAACATGC...GCCATTTCCCTGCTCTCTTTGAAGTCTCAGAGCCACCCCCAGGGTGGTGACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR GCA 90 bp CCCATTTCTCTGTGCTCCAGGAGTGTCAAGCATGGCTCACAGGAGCCTCTCTCTAGGCTTGGTGGCAAGTaGCTTTGCCCACTGAATCAT +
Preference number: 2 (lower is better)
Translates to: PISLCSRSVKHGSQEPLSRLGGK*LCPLNH
Trigger: ATGATTCAGTGGGCAAAGGCACTTGCCACCAAGCCT...AGAGAGAGGCTCCTGTGAGCCATGCTTGACACTCCTGGAGCACAGAGAAATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CCA 90 bp CCCATTTCTCTGTGCTCCAGGAGTGTCAAGCATGGCTCACAGGAGCCTCTCTCTAGTGTGAGCCTCTCCTaGAAGGCTCACTGGTTTACT +
Preference number: 2 (lower is better)
Translates to: PISLCSRSVKHGSQEPLSSVSLS*KAHWFT
Trigger: AGTAAACCAGTGAGCCTTCCAGGAGAGGCTCACACT...AGAGAGAGGCTCCTGTGAGCCATGCTTGACACTCCTGGAGCACAGAGAAATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CCA 90 bp TCCCCCACATTAGGAGTGAGCAGTCACAAGTCCTTTCTGAGACTGCACCCGTTCAGCTCTGGGCAGGCATaGAAAGTGCTGGCAGATAAG +
Preference number: 2 (lower is better)
Translates to: SPTLGVSSHKSFLRLHPFSSGQA*KVLADK
Trigger: CTTATCTGCCAGCACTTTCCATGCCTGCCCAGAGCT...GAACGGGTGCAGTCTCAGAAAGGACTTGTGACTGCTCACTCCTAATGTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CCA 90 bp TCCCCCACATTAGGAGTGAGCAGTCACAAGTCCTTTCTGAGACTGCACCCGTTCGTTCTCAGTCATCCTTaGGACACAGCGGAGCTGCAA +
Preference number: 2 (lower is better)
Translates to: SPTLGVSSHKSFLRLHPFVLSHP*DTAELQ
Trigger: TTGCAGCTCCGCTGTGTCCCAAGGATGACTGAGAAC...GAACGGGTGCAGTCTCAGAAAGGACTTGTGACTGCTCACTCCTAATGTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR GCA 90 bp TACCAAGTCCAGTTGGTCACAGATGAGACCTTTCCTCTGAGGGTTCAGGAAAGCGTGCATGTGTGCGCGTaGGTGCATGTTCTGGGGATT +
Preference number: 2 (lower is better)
Translates to: YQVQLVTDETFPLRVQESVHVCA*VHVLGI
Trigger: AATCCCCAGAACATGCACGCACGCGCACACATGCAC...GCTTTCCTGAACCCTCAGAGGAAAGGTCTCATCTGTGACCAACTGGACTTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR GCA 90 bp TGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGTTGTGCAACAGGTGCCGTTGGGCTGTAATGAGATaGAGTGAGAAGTGTTCTCAG +
Preference number: 2 (lower is better)
Translates to: CGIASRKQGLPQLCNRCRWAVMR*SEKCSQ
Trigger: CTGAGAACACTTCTCACTGCATCTCATTACAGCCCA...ACGGCACCTGTTGCACAACTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CCA 90 bp AAGAGCTGCAGTTTGTCTGTGACAATGACAGATACCAAGTCCAGTTGGTCACAGTGTCACTGTCCTGGGTaGGGAGGGAGGGTGTTCAGG +
Preference number: 2 (lower is better)
Translates to: KSCSLSVTMTDTKSSWSQCHCPG*GGRVFR
Trigger: CCTGAACACCCTCCCTCCCCACCCAGGACAGTGACA...CTGTGACCAACTGGACTTGGTATCTGTCATTGTCACAGACAAACTGCAGCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CCA 90 bp AGAGTCACCACCCTGGGGGTGGCTCTGAGACTTCAAAGAGAGCAGGGAAATGGCAGGTTGACAGCTGGATaGGAAGAACAGAAGCTATGT +
Preference number: 2 (lower is better)
Translates to: RVTTLGVALRLQREQGNGRLTAG*EEQKLC
Trigger: ACATAGCTTCTGTTCTTCCCATCCAGCTGTCAACCT...GCCATTTCCCTGCTCTCTTTGAAGTCTCAGAGCCACCCCCAGGGTGGTGACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CCA 90 bp TACCAAGTCCAGTTGGTCACAGATGAGACCTTTCCTCTGAGGGTTCAGGAAAGCTGCTGGCAGATAAGGTaGCCTGGCCTCCTAAGATCC +
Preference number: 2 (lower is better)
Translates to: YQVQLVTDETFPLRVQESCWQIR*PGLLRS
Trigger: GGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCA...GCTTTCCTGAACCCTCAGAGGAAAGGTCTCATCTGTGACCAACTGGACTTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CCA 90 bp AGAGTCACCACCCTGGGGGTGGCTCTGAGACTTCAAAGAGAGCAGGGAAATGGCGATACCAAGTCCAGTTaGTCACAGATGAGACCTTTC +
Preference number: 2 (lower is better)
Translates to: RVTTLGVALRLQREQGNGDTKSS*SQMRPF
Trigger: GAAAGGTCTCATCTGTGACCAACTGGACTTGGTATC...GCCATTTCCCTGCTCTCTTTGAAGTCTCAGAGCCACCCCCAGGGTGGTGACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR GCA 90 bp AAGAGCTGCAGTTTGTCTGTGACAATGACAGATACCAAGTCCAGTTGGTCACAGTGCCCAGCTCAGCTCTaGACCCTAGACACAGGCAGA +
Preference number: 2 (lower is better)
Translates to: KSCSLSVTMTDTKSSWSQCPAQL*TLDTGR
Trigger: TCTGCCTGTGTCTAGGGTGCAGAGCTGAGCTGGGCA...CTGTGACCAACTGGACTTGGTATCTGTCATTGTCACAGACAAACTGCAGCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CCA 90 bp AAGAGCTGCAGTTTGTCTGTGACAATGACAGATACCAAGTCCAGTTGGTCACAGGGGATAGCATCTTCCTaGCACCCAGATGCCTCCCCT +
Preference number: 2 (lower is better)
Translates to: KSCSLSVTMTDTKSSWSQGIASS*HPDASP
Trigger: AGGGGAGGCATCTGGGTGCCAGGAAGATGCTATCCC...CTGTGACCAACTGGACTTGGTATCTGTCATTGTCACAGACAAACTGCAGCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR TCA 90 bp TCCCCCACATTAGGAGTGAGCAGTCACAAGTCCTTTCTGAGACTGCACCCGTTCGATGTGAAGACTATGTaGAGAGCACACCACCTCAAA +
Preference number: 2 (lower is better)
Translates to: SPTLGVSSHKSFLRLHPFDVKTM*RAHHLK
Trigger: TTTGAGGTGGTGTGCTCTTCACATAGTCTTCACATC...GAACGGGTGCAGTCTCAGAAAGGACTTGTGACTGCTCACTCCTAATGTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR TCA 90 bp TACAGGGCAGAGGCCAGTGTGAGCCTCTCCTGGAAGGCTCACTGGTTTACTGATGGACTTTATACCAAGTaGGTGCTTAAGGAAATGAGG +
Preference number: 2 (lower is better)
Translates to: YRAEASVSLSWKAHWFTDGLYTK*VLKEMR
Trigger: CCTCATTTCCTTAAGCACTCACTTGGTATAAAGTCC...ATCAGTAAACCAGTGAGCCTTCCAGGAGAGGCTCACACTGGCCTCTGCCCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR GCA 90 bp TACCAAGTCCAGTTGGTCACAGATGAGACCTTTCCTCTGAGGGTTCAGGAAAGCGGTGGCAAGTGCCTTTaGCCACTGAATCATTTCACC +
Preference number: 2 (lower is better)
Translates to: YQVQLVTDETFPLRVQESGGKCL*PLNHFT
Trigger: GGTGAAATGATTCAGTGGGCAAAGGCACTTGCCACC...GCTTTCCTGAACCCTCAGAGGAAAGGTCTCATCTGTGACCAACTGGACTTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR GCA 90 bp AAGAGCTGCAGTTTGTCTGTGACAATGACAGATACCAAGTCCAGTTGGTCACAGGGCAGGCATGGAAAGTaGTGGCAGATAAGGTGGCCT +
Preference number: 2 (lower is better)
Translates to: KSCSLSVTMTDTKSSWSQGRHGK*WQIRWP
Trigger: AGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCC...CTGTGACCAACTGGACTTGGTATCTGTCATTGTCACAGACAAACTGCAGCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CCA 90 bp AAGAGCTGCAGTTTGTCTGTGACAATGACAGATACCAAGTCCAGTTGGTCACAGTCAGGTTGTCAGGCTTaGTGGCAAGTGCCTTTGCCC +
Preference number: 2 (lower is better)
Translates to: KSCSLSVTMTDTKSSWSQSGCQA*WQVPLP
Trigger: GGGCAAAGGCACTTGCCACCAAGCCTGACAACCTGA...CTGTGACCAACTGGACTTGGTATCTGTCATTGTCACAGACAAACTGCAGCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR TCA 90 bp TACCAAGTCCAGTTGGTCACAGATGAGACCTTTCCTCTGAGGGTTCAGGAAAGCGCATGTTCTGGGGATTaGATTCAGGTTGTCAGGCTT +
Preference number: 2 (lower is better)
Translates to: YQVQLVTDETFPLRVQESACSGD*IQVVRL
Trigger: AAGCCTGACAACCTGAATTCAATCCCCAGAACATGC...GCTTTCCTGAACCCTCAGAGGAAAGGTCTCATCTGTGACCAACTGGACTTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR GCA 90 bp TACCAAGTCCAGTTGGTCACAGATGAGACCTTTCCTCTGAGGGTTCAGGAAAGCGGGTCTCTTTTCTGTTaGAGTCTTCAGGACAGGCAA +
Preference number: 2 (lower is better)
Translates to: YQVQLVTDETFPLRVQESGSLFC*SLQDRQ
Trigger: TTGCCTGTCCTGAAGACTGCAACAGAAAAGAGACCC...GCTTTCCTGAACCCTCAGAGGAAAGGTCTCATCTGTGACCAACTGGACTTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CAA 90 bp TTCTGGGGATTGAATTCAGGTTGTCAGGCTTGGTGGCAAGTGCCTTaGCCCACTGAATCATTTCACCGTCCCATCTACTTCAAGCTTTCT +
Preference number: 2 (lower is better)
Translates to: FWGLNSGCQAWWQVP*PTESFHRPIYFKLS
Trigger: AGAAAGCTTGAAGTAGATGGGACGGTGAAATGATTCAGTGGGCAAAGGCACTTGCCACCAAGCCTGACAACCTGAATTCAATCCCCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CAA 90 bp CAAGAGCTGCAGTTTGTCTGTGACAATGACAGATACCAAGTCCAGTaGGTCACAGATGAGACCTTTCCTCTGAGGGTTCAGGAAAGCTCT +
Preference number: 2 (lower is better)
Translates to: QELQFVCDNDRYQVQ*VTDETFPLRVQESS
Trigger: AGAGCTTTCCTGAACCCTCAGAGGAAAGGTCTCATCTGTGACCAACTGGACTTGGTATCTGTCATTGTCACAGACAAACTGCAGCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CAA 90 bp AAAGGGACAAGAAATACACCAATCATTGTAAGTGCAGAGATCCTTTaGTCAAGAATGGACAGGGAATGGGGGTGGGCAGGGTCTGGCAGA +
Preference number: 2 (lower is better)
Translates to: KGTRNTPIIVSAEIL*SRMDREWGWAGSGR
Trigger: TCTGCCAGACCCTGCCCACCCCCATTCCCTGTCCATTCTTGACAAAAGGATCTCTGCACTTACAATGATTGGTGTATTTCTTGTCCCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CCA 90 bp TACCAAGTCCAGTTGGTCACAGATGAGACCTTTCCTCTGAGGGTTCAGGAAAGCAGGTTGACAGCTGGATaGGAAGAACAGAAGCTATGT +
Preference number: 2 (lower is better)
Translates to: YQVQLVTDETFPLRVQESRLTAG*EEQKLC
Trigger: ACATAGCTTCTGTTCTTCCCATCCAGCTGTCAACCT...GCTTTCCTGAACCCTCAGAGGAAAGGTCTCATCTGTGACCAACTGGACTTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR TCA 90 bp TCCCCCACATTAGGAGTGAGCAGTCACAAGTCCTTTCTGAGACTGCACCCGTTCGATCACATTTCCCTTTaGATTTCCCAAGTATTCAGT +
Preference number: 2 (lower is better)
Translates to: SPTLGVSSHKSFLRLHPFDHISL*ISQVFS
Trigger: ACTGAATACTTGGGAAATTCAAAGGGAAATGTGATC...GAACGGGTGCAGTCTCAGAAAGGACTTGTGACTGCTCACTCCTAATGTGGGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR TCA 90 bp TACCAAGTCCAGTTGGTCACAGATGAGACCTTTCCTCTGAGGGTTCAGGAAAGCGATCACATTTCCCTTTaGATTTCCCAAGTATTCAGT +
Preference number: 2 (lower is better)
Translates to: YQVQLVTDETFPLRVQESDHISL*ISQVFS
Trigger: ACTGAATACTTGGGAAATTCAAAGGGAAATGTGATC...GCTTTCCTGAACCCTCAGAGGAAAGGTCTCATCTGTGACCAACTGGACTTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CCA 72 bp GCAGGGTCTGGCAGATGGGCTGGGTGGGGTGTGTTCTaGGGCCGCCCCGGCAGCCCGGGAGATGATGCTTCT +
Preference number: 3 (lower is better)
Translates to: AGSGRWAGWGVF*GRPGSPGDDAS
Trigger: AGAAGCATCATCTCCCGGGCTGCCGGGGCGGCCCCAGAACACACCCCACCCAGCCCATCTGCCAGACCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR GCA 72 bp CCTGTGGGCAGAACAGGGAAAAGCCGCTCTCCCAGCTaGCAGCTACAGGCTACAGGGCTACAGGGCAGAGGC +
Preference number: 3 (lower is better)
Translates to: PVGRTGKSRSPS*QLQATGLQGRG
Trigger: GCCTCTGCCCTGTAGCCCTGTAGCCTGTAGCTGGCAGCTGGGAGAGCGGCTTTTCCCTGTTCTGCCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR GCA 72 bp CACACCACCTCAAAGGCAAGGTGCCCAGCTCAGCTCTaGACCCTAGACACAGGCAGACCCCATTTCCAGGCC +
Preference number: 3 (lower is better)
Translates to: HTTSKARCPAQL*TLDTGRPHFQA
Trigger: GGCCTGGAAATGGGGTCTGCCTGTGTCTAGGGTGCAGAGCTGAGCTGGGCACCTTGCCTTTGAGGTGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR GCA 72 bp TGCGCGCACACGTGTGTGTGCACGTGTGTGTGTGTGTaGATGTGTGCGCGTGCGTGCATGTTCTGGGGATTG +
Preference number: 3 (lower is better)
Translates to: CAHTCVCTCVCV*MCARACMFWGL
Trigger: CAATCCCCAGAACATGCACGCACGCGCACACATGCACACACACACACACGTGCACACACACGTGTGCGCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CCA 72 bp AGTGCAGAGATCCTTTTGTCAAGAATGGACAGGGAATaGGGGTGGGCAGGGTCTGGCAGATGGGCTGGGTGG +
Preference number: 3 (lower is better)
Translates to: SAEILLSRMDRE*GWAGSGRWAGW
Trigger: CCACCCAGCCCATCTGCCAGACCCTGCCCACCCCCATTCCCTGTCCATTCTTGACAAAAGGATCTCTGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CAA 90 bp TGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGTTGTGCAACAGGTGCCGTTGTTCTCAGTCATCCTaGGGACACAGCGGAGCTGCA +
Preference number: 3 (lower is better)
Translates to: CGIASRKQGLPQLCNRCRCSQSS*GHSGAA
Trigger: TGCAGCTCCGCTGTGTCCCAAGGATGACTGAGAACA...ACGGCACCTGTTGCACAACTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR TCA 72 bp AGCAAGGACTGCCCCAGTTGTGCAACAGGTGCCGTGTaGCAGTGTGACCCATTTCTCTGTGCTCCAGGAGTG +
Preference number: 3 (lower is better)
Translates to: SKDCPSCATGAV*QCDPFLCAPGV
Trigger: CACTCCTGGAGCACAGAGAAATGGGTCACACTGTCACACGGCACCTGTTGCACAACTGGGGCAGTCCTTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CCA 72 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTaGCCTCCTAAGATCCTACAGAAACACCTGTGGGCA +
Preference number: 3 (lower is better)
Translates to: GQAWKVLADKVA*PPKILQKHLWA
Trigger: TGCCCACAGGTGTTTCTGTAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CCA 72 bp GGGTTCAGGAAAGCTCTGGGCAGGCATGGAAAGTGCTaGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTAC +
Preference number: 3 (lower is better)
Translates to: GFRKALGRHGKC*QIRWPGLLRSY
Trigger: GTAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCCAGAGCTTTCCTGAACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CCA 72 bp TTTCCTCTGAGGGTTCAGGAAAGCTCTGGGCAGGCATaGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCT +
Preference number: 3 (lower is better)
Translates to: FPLRVQESSGQA*KVLADKVAWPP
Trigger: AGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCCAGAGCTTTCCTGAACCCTCAGAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CAA 90 bp AGAGTCACCACCCTGGGGGTGGCTCTGAGACTTCAAAGAGAGCAGGGAAATGGCAACTCAGACTCCCCTTaGCAGCCTGAAACCACACGT +
Preference number: 3 (lower is better)
Translates to: RVTTLGVALRLQREQGNGNSDSP*QPETTR
Trigger: ACGTGTGGTTTCAGGCTGCAAAGGGGAGTCTGAGTT...GCCATTTCCCTGCTCTCTTTGAAGTCTCAGAGCCACCCCCAGGGTGGTGACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR TCA 72 bp CTGCCCCAGTTGTGCAACAGGTGCCGTGTGACAGTGTaGCCCATTTCTCTGTGCTCCAGGAGTGTCAAGCAT +
Preference number: 3 (lower is better)
Translates to: LPQLCNRCRVTV*PISLCSRSVKH
Trigger: ATGCTTGACACTCCTGGAGCACAGAGAAATGGGTCACACTGTCACACGGCACCTGTTGCACAACTGGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CCA 72 bp CAGGGCTACAGGGCAGAGGCCAGTGTGAGCCTCTCCTaGAAGGCTCACTGGTTTACTGATCACATTTCCCTT +
Preference number: 3 (lower is better)
Translates to: QGYRAEASVSLS*KAHWFTDHISL
Trigger: AAGGGAAATGTGATCAGTAAACCAGTGAGCCTTCCAGGAGAGGCTCACACTGGCCTCTGCCCTGTAGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CCA 72 bp GCTCTGGGCAGGCATGGAAAGTGCTGGCAGATAAGGTaGCCTGGCCTCCTAAGATCCTACAGAAACACCTGT +
Preference number: 3 (lower is better)
Translates to: ALGRHGKCWQIR*PGLLRSYRNTC
Trigger: ACAGGTGTTTCTGTAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CAA 90 bp TACAGGGCAGAGGCCAGTGTGAGCCTCTCCTGGAAGGCTCACTGGTTTACTGATAACTCAGACTCCCCTTaGCAGCCTGAAACCACACGT +
Preference number: 3 (lower is better)
Translates to: YRAEASVSLSWKAHWFTDNSDSP*QPETTR
Trigger: ACGTGTGGTTTCAGGCTGCAAAGGGGAGTCTGAGTT...ATCAGTAAACCAGTGAGCCTTCCAGGAGAGGCTCACACTGGCCTCTGCCCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CAA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTACCAGATGCCTCCCCTTaGTTCTGGCTCACACAAAAA +
Preference number: 3 (lower is better)
Translates to: GQAWKVLADKVAWPPKILPDASP*FWLTQK
Trigger: TTTTTGTGTGAGCCAGAACAAAGGGGAGGCATCTGG...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CAA 90 bp AGAGTCACCACCCTGGGGGTGGCTCTGAGACTTCAAAGAGAGCAGGGAAATGGCCCAGATGCCTCCCCTTaGTTCTGGCTCACACAAAAA +
Preference number: 3 (lower is better)
Translates to: RVTTLGVALRLQREQGNGPDASP*FWLTQK
Trigger: TTTTTGTGTGAGCCAGAACAAAGGGGAGGCATCTGG...GCCATTTCCCTGCTCTCTTTGAAGTCTCAGAGCCACCCCCAGGGTGGTGACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CAA 90 bp TGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGTTGTGCAACAGGTGCCGTAGAGGGTTTCAGAGGTaGACAGCTGGATGGGAAGAA +
Preference number: 3 (lower is better)
Translates to: CGIASRKQGLPQLCNRCRRGFQR*TAGWEE
Trigger: TTCTTCCCATCCAGCTGTCAACCTCTGAAACCCTCT...ACGGCACCTGTTGCACAACTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CAA 90 bp TGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGTTGTGCAACAGGTGCCGTTGGTGGCAAGTGCCTTaGCCCACTGAATCATTTCAC +
Preference number: 3 (lower is better)
Translates to: CGIASRKQGLPQLCNRCRWWQVP*PTESFH
Trigger: GTGAAATGATTCAGTGGGCAAAGGCACTTGCCACCA...ACGGCACCTGTTGCACAACTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CAA 90 bp AGAGTCACCACCCTGGGGGTGGCTCTGAGACTTCAAAGAGAGCAGGGAAATGGCTGGGTCTCTTTTCTGTaGCAGTCTTCAGGACAGGCA +
Preference number: 3 (lower is better)
Translates to: RVTTLGVALRLQREQGNGWVSFL*QSSGQA
Trigger: TGCCTGTCCTGAAGACTGCAACAGAAAAGAGACCCA...GCCATTTCCCTGCTCTCTTTGAAGTCTCAGAGCCACCCCCAGGGTGGTGACTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR TCA 72 bp GAGGTTCTCATAGAGTCACCACCCTGGGGGTGGCTCTaGGACTTCAAAGAGAGCAGGGAAATGGCAAGAGCT +
Preference number: 3 (lower is better)
Translates to: EVLIESPPWGWL*DFKESREMARA
Trigger: AGCTCTTGCCATTTCCCTGCTCTCTTTGAAGTCTCAGAGCCACCCCCAGGGTGGTGACTCTATGAGAACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CCA 72 bp GTGTGTGTGTGCATGTGTGCGCGTGCGTGCATGTTCTaGGGATTGAATTCAGGTTGTCAGGCTTGGTGGCAA +
Preference number: 3 (lower is better)
Translates to: VCVCMCARACMF*GLNSGCQAWWQ
Trigger: TTGCCACCAAGCCTGACAACCTGAATTCAATCCCCAGAACATGCACGCACGCGCACACATGCACACACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CAA 90 bp TACAGGGCAGAGGCCAGTGTGAGCCTCTCCTGGAAGGCTCACTGGTTTACTGATTGGTGGCAAGTGCCTTaGCCCACTGAATCATTTCAC +
Preference number: 3 (lower is better)
Translates to: YRAEASVSLSWKAHWFTDWWQVP*PTESFH
Trigger: GTGAAATGATTCAGTGGGCAAAGGCACTTGCCACCA...ATCAGTAAACCAGTGAGCCTTCCAGGAGAGGCTCACACTGGCCTCTGCCCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR TCA 72 bp GCTATGTCCACTTTAGGGGCAGATGTGAAGACTATGTaGAGAGCACACCACCTCAAAGGCAAGGTGCCCAGC +
Preference number: 3 (lower is better)
Translates to: AMSTLGADVKTM*RAHHLKGKVPS
Trigger: GCTGGGCACCTTGCCTTTGAGGTGGTGTGCTCTTCACATAGTCTTCACATCTGCCCCTAAAGTGGACATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR TCA 72 bp ACCAAGTCCAGTTGGTCACAGATGAGACCTTTCCTCTaGGGGTTCAGGAAAGCTCTGGGCAGGCATGGAAAG +
Preference number: 3 (lower is better)
Translates to: TKSSWSQMRPFL*GFRKALGRHGK
Trigger: CTTTCCATGCCTGCCCAGAGCTTTCCTGAACCCTCAGAGGAAAGGTCTCATCTGTGACCAACTGGACTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR TCA 72 bp CAGCTCTGTGTTCAAACCCAGTGCCCACAGCCAAGGTaGCAGGCCTACATTAACACAGGTAAGCAACAGCAG +
Preference number: 3 (lower is better)
Translates to: QLCVQTQCPQPR*QAYINTGKQQQ
Trigger: CTGCTGTTGCTTACCTGTGTTAATGTAGGCCTGTCACCTTGGCTGTGGGCACTGGGTTTGAACACAGAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR GCA 72 bp CTTCTGGGCCCTCATAAACCTGGGTCTCTTTTCTGTTaGAGTCTTCAGGACAGGCAAAGCAGCTCCCCACTT +
Preference number: 3 (lower is better)
Translates to: LLGPHKPGSLFC*SLQDRQSSSPL
Trigger: AAGTGGGGAGCTGCTTTGCCTGTCCTGAAGACTGCAACAGAAAAGAGACCCAGGTTTATGAGGGCCCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CCA 72 bp TGGATCCCCCAGGCTAAACTGCCTGCTCTTCTAAGTTaGCTTGTGCTTTGGATGACTGTAGCCTCCTGGACA +
Preference number: 3 (lower is better)
Translates to: WIPQAKLPALLS*LVLWMTVASWT
Trigger: TGTCCAGGAGGCTACAGTCATCCAAAGCACAAGCCAACTTAGAAGAGCAGGCAGTTTAGCCTGGGGGATCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CAA 90 bp TCCCCCACATTAGGAGTGAGCAGTCACAAGTCCTTTCTGAGACTGCACCCGTTCAGAGGGTTTCAGAGGTaGACAGCTGGATGGGAAGAA +
Preference number: 3 (lower is better)
Translates to: SPTLGVSSHKSFLRLHPFRGFQR*TAGWEE
Trigger: TTCTTCCCATCCAGCTGTCAACCTCTGAAACCCTCT...GAACGGGTGCAGTCTCAGAAAGGACTTGTGACTGCTCACTCCTAATGTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CAA 90 bp AGAGTCACCACCCTGGGGGTGGCTCTGAGACTTCAAAGAGAGCAGGGAAATGGCAATAAAAACACTGAGTaGTGTATGTCCGTCGAGGCG +
Preference number: 3 (lower is better)
Translates to: RVTTLGVALRLQREQGNGNKNTE*CMSVEA
Trigger: CGCCTCGACGGACATACACAACTCAGTGTTTTTATT...GCCATTTCCCTGCTCTCTTTGAAGTCTCAGAGCCACCCCCAGGGTGGTGACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CAA 90 bp TCCCCCACATTAGGAGTGAGCAGTCACAAGTCCTTTCTGAGACTGCACCCGTTCTGCATGTTCTGGGGATaGAATTCAGGTTGTCAGGCT +
Preference number: 3 (lower is better)
Translates to: SPTLGVSSHKSFLRLHPFCMFWG*NSGCQA
Trigger: AGCCTGACAACCTGAATTCAATCCCCAGAACATGCA...GAACGGGTGCAGTCTCAGAAAGGACTTGTGACTGCTCACTCCTAATGTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CAA 90 bp CTCTTTTCTGTTGCAGTCTTCAGGACAGGCAAAGCAGCTCCCCACTTAGACCTCTGCATGTTCTGGGGATaGAATTCAGGTTGTCAGGCT +
Preference number: 3 (lower is better)
Translates to: LFSVAVFRTGKAAPHLDLCMFWG*NSGCQA
Trigger: AGCCTGACAACCTGAATTCAATCCCCAGAACATGCA...GAGGTCTAAGTGGGGAGCTGCTTTGCCTGTCCTGAAGACTGCAACAGAAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR TCA 72 bp AGGTTGTCAGGCTTGGTGGCAAGTGCCTTTGCCCACTaGATCATTTCACCGTCCCATCTACTTCAAGCTTTC +
Preference number: 3 (lower is better)
Translates to: RLSGLVASAFAH*IISPSHLLQAF
Trigger: GAAAGCTTGAAGTAGATGGGACGGTGAAATGATTCAGTGGGCAAAGGCACTTGCCACCAAGCCTGACAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR TCA 72 bp CACAAGTCCTTTCTGAGACTGCACCCGTTCTGCGCATaGAAAACAGCGCTTTCAGATGAAACCGCCAATTCA +
Preference number: 3 (lower is better)
Translates to: HKSFLRLHPFCA*KTALSDETANS
Trigger: TGAATTGGCGGTTTCATCTGAAAGCGCTGTTTTTCATGCGCAGAACGGGTGCAGTCTCAGAAAGGACTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR GCA 72 bp CCATTTACATCCACACAAAGAACAATCAGCAGTCAGTaGCCTTGTTTCCCAGGGATAGCATCTTCCTGGCAC +
Preference number: 3 (lower is better)
Translates to: PFTSTQRTISSQ*PCFPGIASSWH
Trigger: GTGCCAGGAAGATGCTATCCCTGGGAAACAAGGGCACTGACTGCTGATTGTTCTTTGTGTGGATGTAAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CCA 72 bp AAGGAAATGAGGCAGAGGGTTTCAGAGGTTGACAGCTaGATGGGAAGAACAGAAGCTATGTCCACTTTAGGG +
Preference number: 3 (lower is better)
Translates to: KEMRQRVSEVDS*MGRTEAMSTLG
Trigger: CCCTAAAGTGGACATAGCTTCTGTTCTTCCCATCCAGCTGTCAACCTCTGAAACCCTCTGCCTCATTTCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CCA 72 bp TGCATGTTCTGGGGATTGAATTCAGGTTGTCAGGCTTaGTGGCAAGTGCCTTTGCCCACTGAATCATTTCAC +
Preference number: 3 (lower is better)
Translates to: CMFWGLNSGCQA*WQVPLPTESFH
Trigger: GTGAAATGATTCAGTGGGCAAAGGCACTTGCCACCAAGCCTGACAACCTGAATTCAATCCCCAGAACATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CAA 90 bp TTGAATTCAGGTTGTCAGGCTTGGTGGCAAGTGCCTTTGCCCACTGAATCATTTAAGTTGGCTTGTGCTTaGGATGACTGTAGCCTCCTG +
Preference number: 3 (lower is better)
Translates to: LNSGCQAWWQVPLPTESFKLACA*DDCSLL
Trigger: CAGGAGGCTACAGTCATCCAAAGCACAAGCCAACTT...AAATGATTCAGTGGGCAAAGGCACTTGCCACCAAGCCTGACAACCTGAATTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR-3UTR CAA 90 bp AAGAGCTGCAGTTTGTCTGTGACAATGACAGATACCAAGTCCAGTTGGTCACAGTGGGTCTCTTTTCTGTaGCAGTCTTCAGGACAGGCA +
Preference number: 3 (lower is better)
Translates to: KSCSLSVTMTDTKSSWSQWVSFL*QSSGQA
Trigger: TGCCTGTCCTGAAGACTGCAACAGAAAAGAGACCCA...CTGTGACCAACTGGACTTGGTATCTGTCATTGTCACAGACAAACTGCAGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR TCA 72 bp ACAGGTAAGCAACAGCAGATAGACAATTCCCAAAACTaGACATTCCTGCTCCCTTCCAGATACGAATGTGAC +
Preference number: 3 (lower is better)
Translates to: TGKQQQIDNSQN*TFLLPSRYECD
Trigger: GTCACATTCGTATCTGGAAGGGAGCAGGAATGTTCAGTTTTGGGAATTGTCTATCTGCTGTTGCTTACCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR GCA 72 bp TCCCAAAGGGACAAGAAATACACCAATCATTGTAAGTaGAGAGATCCTTTTGTCAAGAATGGACAGGGAATG +
Preference number: 3 (lower is better)
Translates to: SQRDKKYTNHCK*RDPFVKNGQGM
Trigger: CATTCCCTGTCCATTCTTGACAAAAGGATCTCTGCACTTACAATGATTGGTGTATTTCTTGTCCCTTTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp GCTAGGAGGACAGATTCCTGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGCGGCAGGCTGCACCCTaGCCCTCGGAGCTCCACAGG +
Preference number: 4 (lower is better)
Translates to: ARRTDSCGIASRKQGLPQRQAAP*PSELHR
Trigger: CCTGTGGAGCTCCGAGGGTCAGGGTGCAGCCTGCCG...CTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACAGGAATCTGTCCTCCTAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTACAGGGCTGGGCGAGCTaGGGGCCGTGTGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GQAWKVLADKVAWPPKILQGWAS*GPCVCW
Trigger: CCAGCAGACACACGGCCCCCAGCTCGCCCAGCCCTG...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGTTGTGCAACAGGTGCCGTCAGGGCTGGGCGAGCTaGGGGCCGTGTGTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: CGIASRKQGLPQLCNRCRQGWAS*GPCVCW
Trigger: CCAGCAGACACACGGCCCCCAGCTCGCCCAGCCCTG...ACGGCACCTGTTGCACAACTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp AGAGTCACCACCCTGGGGGTGGCTCTGAGACTTCAAAGAGAGCAGGGAAATGGCTCCGAGTGCCAGGGCTaGGCGAGCTGGGGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: RVTTLGVALRLQREQGNGSECQG*ASWGPC
Trigger: ACACGGCCCCCAGCTCGCCCAGCCCTGGCACTCGGA...GCCATTTCCCTGCTCTCTTTGAAGTCTCAGAGCCACCCCCAGGGTGGTGACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp AGTTGGCTTGTGCTTTGGATGACTGTAGCCTCCTGGACAGGGAGACTCTGGCCTTCCGAGTGCCAGGGCTaGGCGAGCTGGGGGCCGTGT +
Preference number: 4 (lower is better)
Translates to: SWLVLWMTVASWTGRLWPSECQG*ASWGPC
Trigger: ACACGGCCCCCAGCTCGCCCAGCCCTGGCACTCGGA...AGGCCAGAGTCTCCCTGTCCAGGAGGCTACAGTCATCCAAAGCACAAGCCAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTACTGGGCAGAGGGGCCTaGACGGAGGTACATGGCGAG +
Preference number: 4 (lower is better)
Translates to: GQAWKVLADKVAWPPKILLGRGA*TEVHGE
Trigger: CTCGCCATGTACCTCCGTGCAGGCCCCTCTGCCCAG...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp TGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGTTGTGCAACAGGTGCCGTCTGGGCAGAGGGGCCTaGACGGAGGTACATGGCGAG +
Preference number: 4 (lower is better)
Translates to: CGIASRKQGLPQLCNRCRLGRGA*TEVHGE
Trigger: CTCGCCATGTACCTCCGTGCAGGCCCCTCTGCCCAG...ACGGCACCTGTTGCACAACTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp TACAGGGCAGAGGCCAGTGTGAGCCTCTCCTGGAAGGCTCACTGGTTTACTGATTGGGGGCCGTGTGTCTaGTGGCGGCACAGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: YRAEASVSLSWKAHWFTDWGPCV*WRHSGC
Trigger: ACACCCACTGTGCCGCCAGCAGACACACGGCCCCCA...ATCAGTAAACCAGTGAGCCTTCCAGGAGAGGCTCACACTGGCCTCTGCCCTGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTACTGCTGGCGGCACAGTaGGTGTGCACAAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GQAWKVLADKVAWPPKILLLAAQ*VCTSPP
Trigger: TGGAGGGCTTGTGCACACCCACTGTGCCGCCAGCAG...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTAGCACCAGCAGCCTATTaGGAGCTGAGGCCGCACACA +
Preference number: 4 (lower is better)
Translates to: GQAWKVLADKVAWPPKILAPAAY*ELRPHT
Trigger: TGTGTGCGGCCTCAGCTCTCAATAGGCTGCTGGTGC...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp TGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGTTGTGCAACAGGTGCCGTTTTGATGCGGGCTCCTaGGGGGACTGGCTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: CGIASRKQGLPQLCNRCRFDAGS*GDWLQV
Trigger: AACCTGGAGCCAGTCCCCTCAGGAGCCCGCATCAAA...ACGGCACCTGTTGCACAACTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTAGCGGCACAGTGGGTGTaGACAAGCCCTCCATTTGGG +
Preference number: 4 (lower is better)
Translates to: GQAWKVLADKVAWPPKILAAQWV*TSPPFG
Trigger: CCCAAATGGAGGGCTTGTGCACACCCACTGTGCCGC...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TGTTTCCCAGGGATAGCATCTTCCTGGCACCCAGATGCCTCCCCTTTGTTCTGGCATGCCCAAGCCTCCTaGGCCAGCCAGCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: CFPGIASSWHPDASPLFWHAQAS*ASQQEL
Trigger: GAGTTCCTGCTGGCTGGCCCAGGAGGCTTGGGCATG...CCAGAACAAAGGGGAGGCATCTGGGTGCCAGGAAGATGCTATCCCTGGGAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp TGTTTCCCAGGGATAGCATCTTCCTGGCACCCAGATGCCTCCCCTTTGTTCTGGTCGTGCACCAGGATGTaGAGGGCCTTCTCGTGCTCG +
Preference number: 4 (lower is better)
Translates to: CFPGIASSWHPDASPLFWSCTRM*RAFSCS
Trigger: CGAGCACGAGAAGGCCCTGCACATCCTGGTGCACGA...CCAGAACAAAGGGGAGGCATCTGGGTGCCAGGAAGATGCTATCCCTGGGAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp CCCATTTCTCTGTGCTCCAGGAGTGTCAAGCATGGCTCACAGGAGCCTCTCTCTGCGGCACAGTGGGTGTaGACAAGCCCTCCATTTGGG +
Preference number: 4 (lower is better)
Translates to: PISLCSRSVKHGSQEPLSAAQWV*TSPPFG
Trigger: CCCAAATGGAGGGCTTGTGCACACCCACTGTGCCGC...AGAGAGAGGCTCCTGTGAGCCATGCTTGACACTCCTGGAGCACAGAGAAATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp AGAGTCACCACCCTGGGGGTGGCTCTGAGACTTCAAAGAGAGCAGGGAAATGGCTCCAGGAGGCTGTCGTaGTCAGCCTCTGCATACAGC +
Preference number: 4 (lower is better)
Translates to: RVTTLGVALRLQREQGNGSRRLS*SASAYS
Trigger: GCTGTATGCAGAGGCTGACCACGACAGCCTCCTGGA...GCCATTTCCCTGCTCTCTTTGAAGTCTCAGAGCCACCCCCAGGGTGGTGACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGTTGTGCAACAGGTGCCGTCATCTTTGCCCCCAGTaGATACCCTCTGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: CGIASRKQGLPQLCNRCRHLCPQ*IPSAAA
Trigger: TGCTGCGGCAGAGGGTATCCACTGGGGGCAAAGATG...ACGGCACCTGTTGCACAACTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TACAGGGCAGAGGCCAGTGTGAGCCTCTCCTGGAAGGCTCACTGGTTTACTGATGCTTCCCGTGGAGGATaGCACTTTCCATGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: YRAEASVSLSWKAHWFTDASRGG*HFPWAG
Trigger: GCCTGCCCATGGAAAGTGCCATCCTCCACGGGAAGC...ATCAGTAAACCAGTGAGCCTTCCAGGAGAGGCTCACACTGGCCTCTGCCCTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TCCCCCACATTAGGAGTGAGCAGTCACAAGTCCTTTCTGAGACTGCACCCGTTCCTGCTGGCGGCACAGTaGGTGTGCACAAGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: SPTLGVSSHKSFLRLHPFLLAAQ*VCTSPP
Trigger: TGGAGGGCTTGTGCACACCCACTGTGCCGCCAGCAG...GAACGGGTGCAGTCTCAGAAAGGACTTGTGACTGCTCACTCCTAATGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp GCTAGGAGGACAGATTCCTGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGCCCAATCACATTTTCTaGCCAGTGCACAGGGGCACG +
Preference number: 4 (lower is better)
Translates to: ARRTDSCGIASRKQGLPQPNHIF*PVHRGT
Trigger: CGTGCCCCTGTGCACTGGTCAGAAAATGTGATTGGG...CTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACAGGAATCTGTCCTCCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp TGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGTTGTGCAACAGGTGCCGTCCTCTGCATACAGCTTaGGCAAGGCCGTGTCGATGT +
Preference number: 4 (lower is better)
Translates to: CGIASRKQGLPQLCNRCRPLHTA*ARPCRC
Trigger: ACATCGACACGGCCTTGCTCAAGCTGTATGCAGAGG...ACGGCACCTGTTGCACAACTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp AAGAGCTGCAGTTTGTCTGTGACAATGACAGATACCAAGTCCAGTTGGTCACAGCGGCAGGCTGCACCCTaGCCCTCGGAGCTCCACAGG +
Preference number: 4 (lower is better)
Translates to: KSCSLSVTMTDTKSSWSQRQAAP*PSELHR
Trigger: CCTGTGGAGCTCCGAGGGTCAGGGTGCAGCCTGCCG...CTGTGACCAACTGGACTTGGTATCTGTCATTGTCACAGACAAACTGCAGCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTAAAGTCCTGCAGGATGTaGCCCTCCTTAAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GQAWKVLADKVAWPPKILKSCRM*PSLKGR
Trigger: CCTGCCCTTTAAGGAGGGGCACATCCTGCAGGACTT...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp CCCATTTCTCTGTGCTCCAGGAGTGTCAAGCATGGCTCACAGGAGCCTCTCTCTCCTCCGGGCTCCTTTTaGCAAGACCAAAGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PISLCSRSVKHGSQEPLSPPGSF*QDQSLL
Trigger: GAGGAGGCTTTGGTCTTGGCAAAAGGAGCCCGGAGG...AGAGAGAGGCTCCTGTGAGCCATGCTTGACACTCCTGGAGCACAGAGAAATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp TGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGTTGTGCAACAGGTGCCGTGTCGTGGTCAGCCTCTaGATACAGCTTGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: CGIASRKQGLPQLCNRCRVVVSL*IQLEQG
Trigger: GCCTTGCTCAAGCTGTATGCAGAGGCTGACCACGAC...ACGGCACCTGTTGCACAACTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp TGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGTTGTGCAACAGGTGCCGTGCAGTAGTCCTCAGCTaGAGAGAAGTCCCCCATCTC +
Preference number: 4 (lower is better)
Translates to: CGIASRKQGLPQLCNRCRAVVLS*REVPHL
Trigger: GAGATGGGGGACTTCTCTGCAGCTGAGGACTACTGC...ACGGCACCTGTTGCACAACTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp TACCAAGTCCAGTTGGTCACAGATGAGACCTTTCCTCTGAGGGTTCAGGAAAGCTGGGGGCCGTGTGTCTaGTGGCGGCACAGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: YQVQLVTDETFPLRVQESWGPCV*WRHSGC
Trigger: ACACCCACTGTGCCGCCAGCAGACACACGGCCCCCA...GCTTTCCTGAACCCTCAGAGGAAAGGTCTCATCTGTGACCAACTGGACTTGGTA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp AGAGTCACCACCCTGGGGGTGGCTCTGAGACTTCAAAGAGAGCAGGGAAATGGCAGCAAGAGGCTGCTCTaGGGTGGACACTTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: RVTTLGVALRLQREQGNGSKRLL*GGHFLD
Trigger: GTCAAGGAAGTGTCCACCCCAGAGCAGCCTCTTGCT...GCCATTTCCCTGCTCTCTTTGAAGTCTCAGAGCCACCCCCAGGGTGGTGACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp GCTAGGAGGACAGATTCCTGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGGTGGTCCTCCTGGCATaGATACTGTCCCTCATAGCC +
Preference number: 4 (lower is better)
Translates to: ARRTDSCGIASRKQGLPQVVLLA*ILSLIA
Trigger: GGCTATGAGGGACAGTATCCATGCCAGGAGGACCAC...CTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACAGGAATCTGTCCTCCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGTTGTGCAACAGGTGCCGTGTGGTCCTCCTGGCATaGATACTGTCCCTCATAGCC +
Preference number: 4 (lower is better)
Translates to: CGIASRKQGLPQLCNRCRVVLLA*ILSLIA
Trigger: GGCTATGAGGGACAGTATCCATGCCAGGAGGACCAC...ACGGCACCTGTTGCACAACTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp AGTTGGCTTGTGCTTTGGATGACTGTAGCCTCCTGGACAGGGAGACTCTGGCCTCAAGGGCCACCTGTGTaGTCCTCCTGGCATGGATAC +
Preference number: 4 (lower is better)
Translates to: SWLVLWMTVASWTGRLWPQGPPV*SSWHGY
Trigger: GTATCCATGCCAGGAGGACCACACAGGTGGCCCTTG...AGGCCAGAGTCTCCCTGTCCAGGAGGCTACAGTCATCCAAAGCACAAGCCAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTAGGGTTCTGGCAGAGCTaGCAAAGCTCTCGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GQAWKVLADKVAWPPKILGFWQS*QSSRSE
Trigger: CTCAGAACGAGAGCTTTGCCAGCTCTGCCAGAACCC...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TACCAAGTCCAGTTGGTCACAGATGAGACCTTTCCTCTGAGGGTTCAGGAAAGCGGGCCGTGTGTCTGCTaGCGGCACAGTGGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: YQVQLVTDETFPLRVQESGPCVC*RHSGCA
Trigger: TGCACACCCACTGTGCCGCCAGCAGACACACGGCCC...GCTTTCCTGAACCCTCAGAGGAAAGGTCTCATCTGTGACCAACTGGACTTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp TGTTTCCCAGGGATAGCATCTTCCTGGCACCCAGATGCCTCCCCTTTGTTCTGGGTCTGCCTATCCTCTTaGCGATGGGTGGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: CFPGIASSWHPDASPLFWVCLSS*RWVASP
Trigger: AGGAGAAGCCACCCATCGTCAAGAGGATAGGCAGAC...CCAGAACAAAGGGGAGGCATCTGGGTGCCAGGAAGATGCTATCCCTGGGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp TACAGGGCAGAGGCCAGTGTGAGCCTCTCCTGGAAGGCTCACTGGTTTACTGATGTCTGCCTATCCTCTTaGCGATGGGTGGCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: YRAEASVSLSWKAHWFTDVCLSS*RWVASP
Trigger: AGGAGAAGCCACCCATCGTCAAGAGGATAGGCAGAC...ATCAGTAAACCAGTGAGCCTTCCAGGAGAGGCTCACACTGGCCTCTGCCCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp TGTTTCCCAGGGATAGCATCTTCCTGGCACCCAGATGCCTCCCCTTTGTTCTGGCCCAATCACATTTTCTaGCCAGTGCACAGGGGCACG +
Preference number: 4 (lower is better)
Translates to: CFPGIASSWHPDASPLFWPNHIF*PVHRGT
Trigger: CGTGCCCCTGTGCACTGGTCAGAAAATGTGATTGGG...CCAGAACAAAGGGGAGGCATCTGGGTGCCAGGAAGATGCTATCCCTGGGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp AGAGTCACCACCCTGGGGGTGGCTCTGAGACTTCAAAGAGAGCAGGGAAATGGCCGTCATCGAGCGCTATaGCATAGGGGAAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: RVTTLGVALRLQREQGNGRHRAL*HRGSKQ
Trigger: CTGTTTGCTTCCCCTATGTCATAGCGCTCGATGACG...GCCATTTCCCTGCTCTCTTTGAAGTCTCAGAGCCACCCCCAGGGTGGTGACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTACGTCATCGAGCGCTATaGCATAGGGGAAGCAAACAG +
Preference number: 4 (lower is better)
Translates to: GQAWKVLADKVAWPPKILRHRAL*HRGSKQ
Trigger: CTGTTTGCTTCCCCTATGTCATAGCGCTCGATGACG...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTACATTCAGGTAGCTCATaGGGAAGCGCTTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: GQAWKVLADKVAWPPKILHSGSS*GSACTW
Trigger: CCAAGTGCAAGCGCTTCCTCATGAGCTACCTGAATG...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp TGTTTCCCAGGGATAGCATCTTCCTGGCACCCAGATGCCTCCCCTTTGTTCTGGCCTCTGCATACAGCTTaGGCAAGGCCGTGTCGATGT +
Preference number: 4 (lower is better)
Translates to: CFPGIASSWHPDASPLFWPLHTA*ARPCRC
Trigger: ACATCGACACGGCCTTGCTCAAGCTGTATGCAGAGG...CCAGAACAAAGGGGAGGCATCTGGGTGCCAGGAAGATGCTATCCCTGGGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTAAGCAGAAATTCTCAGTaGCCAAGAGGTCCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: GQAWKVLADKVAWPPKILSRNSQ*PRGPGG
Trigger: GCCTCCTGGACCTCTTGGTCACTGAGAATTTCTGCT...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp AGAGTCACCACCCTGGGGGTGGCTCTGAGACTTCAAAGAGAGCAGGGAAATGGCAGCAGAAATTCTCAGTaGCCAAGAGGTCCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: RVTTLGVALRLQREQGNGSRNSQ*PRGPGG
Trigger: GCCTCCTGGACCTCTTGGTCACTGAGAATTTCTGCT...GCCATTTCCCTGCTCTCTTTGAAGTCTCAGAGCCACCCCCAGGGTGGTGACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp GCTAGGAGGACAGATTCCTGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGGTGGCTTCTCCTCACTaGAGTAGGGAAACAGGTCCT +
Preference number: 4 (lower is better)
Translates to: ARRTDSCGIASRKQGLPQVASPH*SRETGP
Trigger: AGGACCTGTTTCCCTACTGCAGTGAGGAGAAGCCAC...CTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACAGGAATCTGTCCTCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp AGAGTCACCACCCTGGGGGTGGCTCTGAGACTTCAAAGAGAGCAGGGAAATGGCGTGGCTTCTCCTCACTaGAGTAGGGAAACAGGTCCT +
Preference number: 4 (lower is better)
Translates to: RVTTLGVALRLQREQGNGVASPH*SRETGP
Trigger: AGGACCTGTTTCCCTACTGCAGTGAGGAGAAGCCAC...GCCATTTCCCTGCTCTCTTTGAAGTCTCAGAGCCACCCCCAGGGTGGTGACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp AGTTGGCTTGTGCTTTGGATGACTGTAGCCTCCTGGACAGGGAGACTCTGGCCTAAGTCCTGCAGGATGTaGCCCTCCTTAAAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SWLVLWMTVASWTGRLWPKSCRM*PSLKGR
Trigger: CCTGCCCTTTAAGGAGGGGCACATCCTGCAGGACTT...AGGCCAGAGTCTCCCTGTCCAGGAGGCTACAGTCATCCAAAGCACAAGCCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp TGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGTTGTGCAACAGGTGCCGTCAGCTGGTTCAGGTCTaGGTACTCATGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: CGIASRKQGLPQLCNRCRQLVQV*VLMKRR
Trigger: CCTCCTCTTCATGAGTACGCAGACCTGAACCAGCTG...ACGGCACCTGTTGCACAACTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp GCTAGGAGGACAGATTCCTGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGCAGCTGGTTCAGGTCTaGGTACTCATGAAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ARRTDSCGIASRKQGLPQQLVQV*VLMKRR
Trigger: CCTCCTCTTCATGAGTACGCAGACCTGAACCAGCTG...CTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACAGGAATCTGTCCTCCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp CCCATTTCTCTGTGCTCCAGGAGTGTCAAGCATGGCTCACAGGAGCCTCTCTCTGCAGTAGTCCTCAGCTaGAGAGAAGTCCCCCATCTC +
Preference number: 4 (lower is better)
Translates to: PISLCSRSVKHGSQEPLSAVVLS*REVPHL
Trigger: GAGATGGGGGACTTCTCTGCAGCTGAGGACTACTGC...AGAGAGAGGCTCCTGTGAGCCATGCTTGACACTCCTGGAGCACAGAGAAATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp TCCCCCACATTAGGAGTGAGCAGTCACAAGTCCTTTCTGAGACTGCACCCGTTCAATGGGCAGAGAAGCTaGACGGACCAGGTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SPTLGVSSHKSFLRLHPFNGQRS*TDQVSG
Trigger: GCCAGACACCTGGTCCGTGCAGCTTCTCTGCCCATT...GAACGGGTGCAGTCTCAGAAAGGACTTGTGACTGCTCACTCCTAATGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTACCTCTTGACGATGGGTaGCTTCTCCTCACTGCAGTA +
Preference number: 4 (lower is better)
Translates to: GQAWKVLADKVAWPPKILPLDDG*LLLTAV
Trigger: TACTGCAGTGAGGAGAAGCCACCCATCGTCAAGAGG...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp AGTTGGCTTGTGCTTTGGATGACTGTAGCCTCCTGGACAGGGAGACTCTGGCCTTCCCGGACATCCAGCTaGCTGCTTCTGAAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SWLVLWMTVASWTGRLWPSRTSS*LLLKSS
Trigger: AGAGCTCTTCAGAAGCAGCCAGCTGGATGTCCGGGA...AGGCCAGAGTCTCCCTGTCCAGGAGGCTACAGTCATCCAAAGCACAAGCCAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTATCACCTTGGGTCAGCTaGTTCAGGTCTGCGTACTCA +
Preference number: 4 (lower is better)
Translates to: GQAWKVLADKVAWPPKILSPWVS*FRSAYS
Trigger: TGAGTACGCAGACCTGAACCAGCTGACCCAAGGTGA...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGTTGTGCAACAGGTGCCGTTTCTCCTGGTCACCTTaGGTCAGCTGGTTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: CGIASRKQGLPQLCNRCRFSWSP*VSWFRS
Trigger: AGACCTGAACCAGCTGACCCAAGGTGACCAGGAGAA...ACGGCACCTGTTGCACAACTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TCCCCCACATTAGGAGTGAGCAGTCACAAGTCCTTTCTGAGACTGCACCCGTTCCATCTTTGCCCCCAGTaGATACCCTCTGCCGCAGCA +
Preference number: 4 (lower is better)
Translates to: SPTLGVSSHKSFLRLHPFHLCPQ*IPSAAA
Trigger: TGCTGCGGCAGAGGGTATCCACTGGGGGCAAAGATG...GAACGGGTGCAGTCTCAGAAAGGACTTGTGACTGCTCACTCCTAATGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TGTTTCCCAGGGATAGCATCTTCCTGGCACCCAGATGCCTCCCCTTTGTTCTGGGGCAGGCCGGCACCCTaGACTTTCTCTTTCAACAAG +
Preference number: 4 (lower is better)
Translates to: CFPGIASSWHPDASPLFWGRPAP*TFSFNK
Trigger: CTTGTTGAAAGAGAAAGTCCAGGGTGCCGGCCTGCC...CCAGAACAAAGGGGAGGCATCTGGGTGCCAGGAAGATGCTATCCCTGGGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TACAGGGCAGAGGCCAGTGTGAGCCTCTCCTGGAAGGCTCACTGGTTTACTGATGGCAGGCCGGCACCCTaGACTTTCTCTTTCAACAAG +
Preference number: 4 (lower is better)
Translates to: YRAEASVSLSWKAHWFTDGRPAP*TFSFNK
Trigger: CTTGTTGAAAGAGAAAGTCCAGGGTGCCGGCCTGCC...ATCAGTAAACCAGTGAGCCTTCCAGGAGAGGCTCACACTGGCCTCTGCCCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTATCAGGTTTTCTGATTTaGCCAGGCCAAGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: GQAWKVLADKVAWPPKILSGFLI*PGQGPP
Trigger: AGGTGGCCCTTGGCCTGGCCAAATCAGAAAACCTGA...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp TGTTTCCCAGGGATAGCATCTTCCTGGCACCCAGATGCCTCCCCTTTGTTCTGGCATTCAGGTAGCTCATaGGGAAGCGCTTGCACTTGG +
Preference number: 4 (lower is better)
Translates to: CFPGIASSWHPDASPLFWHSGSS*GSACTW
Trigger: CCAAGTGCAAGCGCTTCCTCATGAGCTACCTGAATG...CCAGAACAAAGGGGAGGCATCTGGGTGCCAGGAAGATGCTATCCCTGGGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp TCCCCCACATTAGGAGTGAGCAGTCACAAGTCCTTTCTGAGACTGCACCCGTTCGTCGTGGTCAGCCTCTaGATACAGCTTGAGCAAGGC +
Preference number: 4 (lower is better)
Translates to: SPTLGVSSHKSFLRLHPFVVVSL*IQLEQG
Trigger: GCCTTGCTCAAGCTGTATGCAGAGGCTGACCACGAC...GAACGGGTGCAGTCTCAGAAAGGACTTGTGACTGCTCACTCCTAATGTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTAATCTCCTCACTTTTCTaGAGCAGCCAGTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: GQAWKVLADKVAWPPKILISSLF*SSQSAW
Trigger: CCATGCTGACTGGCTGCTGCAGAAAAGTGAGGAGAT...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp AGTTGGCTTGTGCTTTGGATGACTGTAGCCTCCTGGACAGGGAGACTCTGGCCTCACTCAATGCTGATGTaGTCTCTGTCGCCCATCAGC +
Preference number: 4 (lower is better)
Translates to: SWLVLWMTVASWTGRLWPHSMLM*SLSPIS
Trigger: GCTGATGGGCGACAGAGACCACATCAGCATTGAGTG...AGGCCAGAGTCTCCCTGTCCAGGAGGCTACAGTCATCCAAAGCACAAGCCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp AGTTGGCTTGTGCTTTGGATGACTGTAGCCTCCTGGACAGGGAGACTCTGGCCTTCACCTTGGGTCAGCTaGTTCAGGTCTGCGTACTCA +
Preference number: 4 (lower is better)
Translates to: SWLVLWMTVASWTGRLWPSPWVS*FRSAYS
Trigger: TGAGTACGCAGACCTGAACCAGCTGACCCAAGGTGA...AGGCCAGAGTCTCCCTGTCCAGGAGGCTACAGTCATCCAAAGCACAAGCCAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TACAGGGCAGAGGCCAGTGTGAGCCTCTCCTGGAAGGCTCACTGGTTTACTGATTTCTCCTGGTCACCTTaGGTCAGCTGGTTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: YRAEASVSLSWKAHWFTDFSWSP*VSWFRS
Trigger: AGACCTGAACCAGCTGACCCAAGGTGACCAGGAGAA...ATCAGTAAACCAGTGAGCCTTCCAGGAGAGGCTCACACTGGCCTCTGCCCTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp AGTTGGCTTGTGCTTTGGATGACTGTAGCCTCCTGGACAGGGAGACTCTGGCCTTGGCCTGTGTCTCAGTaGCTTCTACATCTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: SWLVLWMTVASWTGRLWPWPVSQ*LLHLCP
Trigger: GGGGCAAAGATGTAGAAGCCACTGAGACACAGGCCA...AGGCCAGAGTCTCCCTGTCCAGGAGGCTACAGTCATCCAAAGCACAAGCCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TGTTTCCCAGGGATAGCATCTTCCTGGCACCCAGATGCCTCCCCTTTGTTCTGGGTAGTCTCCGGAGTTTaGCCTGTGTCTCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: CFPGIASSWHPDASPLFWVVSGV*PVSQWL
Trigger: AAGCCACTGAGACACAGGCCAAACTCCGGAGACTAC...CCAGAACAAAGGGGAGGCATCTGGGTGCCAGGAAGATGCTATCCCTGGGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TCCCCCACATTAGGAGTGAGCAGTCACAAGTCCTTTCTGAGACTGCACCCGTTCGGGTTCTGGCAGAGCTaGCAAAGCTCTCGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: SPTLGVSSHKSFLRLHPFGFWQS*QSSRSE
Trigger: CTCAGAACGAGAGCTTTGCCAGCTCTGCCAGAACCC...GAACGGGTGCAGTCTCAGAAAGGACTTGTGACTGCTCACTCCTAATGTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TTGAATTCAGGTTGTCAGGCTTGGTGGCAAGTGCCTTTGCCCACTGAATCATTTGGGCCGTGTGTCTGCTaGCGGCACAGTGGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: LNSGCQAWWQVPLPTESFGPCVC*RHSGCA
Trigger: TGCACACCCACTGTGCCGCCAGCAGACACACGGCCC...AAATGATTCAGTGGGCAAAGGCACTTGCCACCAAGCCTGACAACCTGAATTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp TGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGTTGTGCAACAGGTGCCGTGCAGGAAATGGTAAATaGAGCAGTCATTGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: CGIASRKQGLPQLCNRCRAGNGK*SSHWCR
Trigger: TCGGCACCAATGACTGCTTCATTTACCATTTCCTGC...ACGGCACCTGTTGCACAACTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp CCCATTTCTCTGTGCTCCAGGAGTGTCAAGCATGGCTCACAGGAGCCTCTCTCTCGTTCACAGGTTTCTTaGAGCCCAGGTGTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: PISLCSRSVKHGSQEPLSRSQVS*SPGVCV
Trigger: TACACAGACACCTGGGCTTCAAGAAACCTGTGAACG...AGAGAGAGGCTCCTGTGAGCCATGCTTGACACTCCTGGAGCACAGAGAAATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp CCCATTTCTCTGTGCTCCAGGAGTGTCAAGCATGGCTCACAGGAGCCTCTCTCTGTAAATCAGGTTTTCTaGTTTGGCCAGGCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: PISLCSRSVKHGSQEPLSVNQVF*FGQAKG
Trigger: GCCCTTGGCCTGGCCAAATCAGAAAACCTGATTTAC...AGAGAGAGGCTCCTGTGAGCCATGCTTGACACTCCTGGAGCACAGAGAAATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp TGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGTTGTGCAACAGGTGCCGTCTCCATTTGGGTATCTaGCAAACACAGGTTCACCGA +
Preference number: 4 (lower is better)
Translates to: CGIASRKQGLPQLCNRCRLHLGI*QTQVHR
Trigger: TCGGTGAACCTGTGTTTGTCAGATACCCAAATGGAG...ACGGCACCTGTTGCACAACTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTACGACATAAAGATTCCTaGCACAGCACTCCACACACT +
Preference number: 4 (lower is better)
Translates to: GQAWKVLADKVAWPPKILRHKDS*HSTPHT
Trigger: AGTGTGTGGAGTGCTGTGGCAGGAATCTTTATGTCG...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTATGTATAAAGCCTGCCTaGTGCAGAATCCTCCTGTAC +
Preference number: 4 (lower is better)
Translates to: GQAWKVLADKVAWPPKILCIKPA*CRILLY
Trigger: GTACAGGAGGATTCTGCAGCAGGCAGGCTTTATACA...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp TGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGTTGTGCAACAGGTGCCGTTGTATAAAGCCTGCCTaGTGCAGAATCCTCCTGTAC +
Preference number: 4 (lower is better)
Translates to: CGIASRKQGLPQLCNRCRCIKPA*CRILLY
Trigger: GTACAGGAGGATTCTGCAGCAGGCAGGCTTTATACA...ACGGCACCTGTTGCACAACTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTAGCAAAGTACTTTTTGTaGTTCTCCAGCCAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: GQAWKVLADKVAWPPKILAKYFL*FSSQAA
Trigger: TGCTGCCTGGCTGGAGAAGCACAAAAAGTACTTTGC...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp AGTTGGCTTGTGCTTTGGATGACTGTAGCCTCCTGGACAGGGAGACTCTGGCCTATCTCCTCACTTTTCTaGAGCAGCCAGTCAGCATGG +
Preference number: 4 (lower is better)
Translates to: SWLVLWMTVASWTGRLWPISSLF*SSQSAW
Trigger: CCATGCTGACTGGCTGCTGCAGAAAAGTGAGGAGAT...AGGCCAGAGTCTCCCTGTCCAGGAGGCTACAGTCATCCAAAGCACAAGCCAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp TACCAAGTCCAGTTGGTCACAGATGAGACCTTTCCTCTGAGGGTTCAGGAAAGCAATGGGCAGAGAAGCTaGACGGACCAGGTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: YQVQLVTDETFPLRVQESNGQRS*TDQVSG
Trigger: GCCAGACACCTGGTCCGTGCAGCTTCTCTGCCCATT...GCTTTCCTGAACCCTCAGAGGAAAGGTCTCATCTGTGACCAACTGGACTTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp CTGGATGGGAAGAACAGAAGCTATGTCCACTTTAGGGGCAGATGTGAAGACTATCATGCCCAAGCCTCCTaGGCCAGCCAGCAGGAACTC +
Preference number: 4 (lower is better)
Translates to: LDGKNRSYVHFRGRCEDYHAQAS*ASQQEL
Trigger: GAGTTCCTGCTGGCTGGCCCAGGAGGCTTGGGCATG...ATAGTCTTCACATCTGCCCCTAAAGTGGACATAGCTTCTGTTCTTCCCATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp CTCTTTTCTGTTGCAGTCTTCAGGACAGGCAAAGCAGCTCCCCACTTAGACCTCTCCCGGACATCCAGCTaGCTGCTTCTGAAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: LFSVAVFRTGKAAPHLDLSRTSS*LLLKSS
Trigger: AGAGCTCTTCAGAAGCAGCCAGCTGGATGTCCGGGA...GAGGTCTAAGTGGGGAGCTGCTTTGCCTGTCCTGAAGACTGCAACAGAAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TGTTTCCCAGGGATAGCATCTTCCTGGCACCCAGATGCCTCCCCTTTGTTCTGGGAGCGTGTAGAGTCCTaGATGTCCCCATTCACAATG +
Preference number: 4 (lower is better)
Translates to: CFPGIASSWHPDASPLFWERVES*MSPFTM
Trigger: CATTGTGAATGGGGACATCCAGGACTCTACACGCTC...CCAGAACAAAGGGGAGGCATCTGGGTGCCAGGAAGATGCTATCCCTGGGAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TACCAAGTCCAGTTGGTCACAGATGAGACCTTTCCTCTGAGGGTTCAGGAAAGCTCGCCCAGCTTCCCGTaGAGGATGGCACTTTCCATG +
Preference number: 4 (lower is better)
Translates to: YQVQLVTDETFPLRVQESSPSFP*RMALSM
Trigger: CATGGAAAGTGCCATCCTCCACGGGAAGCTGGGCGA...GCTTTCCTGAACCCTCAGAGGAAAGGTCTCATCTGTGACCAACTGGACTTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TCCCCCACATTAGGAGTGAGCAGTCACAAGTCCTTTCTGAGACTGCACCCGTTCTCACCGAAAGGGTTCTaGCAGAGCTGGCAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: SPTLGVSSHKSFLRLHPFSPKGF*QSWQSS
Trigger: AGAGCTTTGCCAGCTCTGCCAGAACCCTTTCGGTGA...GAACGGGTGCAGTCTCAGAAAGGACTTGTGACTGCTCACTCCTAATGTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp TGTTTCCCAGGGATAGCATCTTCCTGGCACCCAGATGCCTCCCCTTTGTTCTGGGCAGGAAATGGTAAATaGAGCAGTCATTGGTGCCGA +
Preference number: 4 (lower is better)
Translates to: CFPGIASSWHPDASPLFWAGNGK*SSHWCR
Trigger: TCGGCACCAATGACTGCTTCATTTACCATTTCCTGC...CCAGAACAAAGGGGAGGCATCTGGGTGCCAGGAAGATGCTATCCCTGGGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp AAGAGCTGCAGTTTGTCTGTGACAATGACAGATACCAAGTCCAGTTGGTCACAGTTTGATGCGGGCTCCTaGGGGGACTGGCTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: KSCSLSVTMTDTKSSWSQFDAGS*GDWLQV
Trigger: AACCTGGAGCCAGTCCCCTCAGGAGCCCGCATCAAA...CTGTGACCAACTGGACTTGGTATCTGTCATTGTCACAGACAAACTGCAGCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTATGCTGTAGTTCAGGATaGTGTATTGTGTGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: GQAWKVLADKVAWPPKILCCSSG*CIVWSR
Trigger: CCTTGACCACACAATACATCATCCTGAACTACAGCA...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp TACCAAGTCCAGTTGGTCACAGATGAGACCTTTCCTCTGAGGGTTCAGGAAAGCCCAGCTGGCTGCTTCTaGAGAGCTCTTTGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: YQVQLVTDETFPLRVQESPAGCF*RALWLP
Trigger: TGGAAGCCAAAGAGCTCTTCAGAAGCAGCCAGCTGG...GCTTTCCTGAACCCTCAGAGGAAAGGTCTCATCTGTGACCAACTGGACTTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp AGTTGGCTTGTGCTTTGGATGACTGTAGCCTCCTGGACAGGGAGACTCTGGCCTCTCCATTTGGGTATCTaGCAAACACAGGTTCACCGA +
Preference number: 4 (lower is better)
Translates to: SWLVLWMTVASWTGRLWPLHLGI*QTQVHR
Trigger: TCGGTGAACCTGTGTTTGTCAGATACCCAAATGGAG...AGGCCAGAGTCTCCCTGTCCAGGAGGCTACAGTCATCCAAAGCACAAGCCAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTAAAACTGTATAAAGCCTaGCTGCTGCAGAATCCTCCT +
Preference number: 4 (lower is better)
Translates to: GQAWKVLADKVAWPPKILKLYKA*LLQNPP
Trigger: AGGAGGATTCTGCAGCAGGCAGGCTTTATACAGTTT...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp TTGAATTCAGGTTGTCAGGCTTGGTGGCAAGTGCCTTTGCCCACTGAATCATTTTCGTGCACCAGGATGTaGAGGGCCTTCTCGTGCTCG +
Preference number: 4 (lower is better)
Translates to: LNSGCQAWWQVPLPTESFSCTRM*RAFSCS
Trigger: CGAGCACGAGAAGGCCCTGCACATCCTGGTGCACGA...AAATGATTCAGTGGGCAAAGGCACTTGCCACCAAGCCTGACAACCTGAATTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TCCCCCACATTAGGAGTGAGCAGTCACAAGTCCTTTCTGAGACTGCACCCGTTCGAGCGTGTAGAGTCCTaGATGTCCCCATTCACAATG +
Preference number: 4 (lower is better)
Translates to: SPTLGVSSHKSFLRLHPFERVES*MSPFTM
Trigger: CATTGTGAATGGGGACATCCAGGACTCTACACGCTC...GAACGGGTGCAGTCTCAGAAAGGACTTGTGACTGCTCACTCCTAATGTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp GCTAGGAGGACAGATTCCTGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGATGGCAAGGTGGGTGTaGTACTCTTCTTTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: ARRTDSCGIASRKQGLPQMARWV*YSSFCN
Trigger: ATTGCAGAAAGAAGAGTACCACACCCACCTTGCCAT...CTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACAGGAATCTGTCCTCCTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp AAGAGCTGCAGTTTGTCTGTGACAATGACAGATACCAAGTCCAGTTGGTCACAGGCTTCCCGTGGAGGATaGCACTTTCCATGGGCAGGC +
Preference number: 4 (lower is better)
Translates to: KSCSLSVTMTDTKSSWSQASRGG*HFPWAG
Trigger: GCCTGCCCATGGAAAGTGCCATCCTCCACGGGAAGC...CTGTGACCAACTGGACTTGGTATCTGTCATTGTCACAGACAAACTGCAGCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TACCAAGTCCAGTTGGTCACAGATGAGACCTTTCCTCTGAGGGTTCAGGAAAGCCCTGTGTGGTCCTCCTaGCATGGATACTGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: YQVQLVTDETFPLRVQESPVWSS*HGYCPS
Trigger: TGAGGGACAGTATCCATGCCAGGAGGACCACACAGG...GCTTTCCTGAACCCTCAGAGGAAAGGTCTCATCTGTGACCAACTGGACTTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TACAGGGCAGAGGCCAGTGTGAGCCTCTCCTGGAAGGCTCACTGGTTTACTGATCACAAGCCCTCCATTTaGGTATCTGACAAACACAGG +
Preference number: 4 (lower is better)
Translates to: YRAEASVSLSWKAHWFTDHKPSI*VSDKHR
Trigger: CCTGTGTTTGTCAGATACCCAAATGGAGGGCTTGTG...ATCAGTAAACCAGTGAGCCTTCCAGGAGAGGCTCACACTGGCCTCTGCCCTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp TTGAATTCAGGTTGTCAGGCTTGGTGGCAAGTGCCTTTGCCCACTGAATCATTTCCTCCGGGCTCCTTTTaGCAAGACCAAAGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LNSGCQAWWQVPLPTESFPPGSF*QDQSLL
Trigger: GAGGAGGCTTTGGTCTTGGCAAAAGGAGCCCGGAGG...AAATGATTCAGTGGGCAAAGGCACTTGCCACCAAGCCTGACAACCTGAATTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp AGTTGGCTTGTGCTTTGGATGACTGTAGCCTCCTGGACAGGGAGACTCTGGCCTATAAAGCCTGCCTGCTaGAGAATCCTCCTGTACATT +
Preference number: 4 (lower is better)
Translates to: SWLVLWMTVASWTGRLWPIKPAC*RILLYI
Trigger: AATGTACAGGAGGATTCTGCAGCAGGCAGGCTTTAT...AGGCCAGAGTCTCCCTGTCCAGGAGGCTACAGTCATCCAAAGCACAAGCCAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp CCCATTTCTCTGTGCTCCAGGAGTGTCAAGCATGGCTCACAGGAGCCTCTCTCTATAAAGCCTGCCTGCTaGAGAATCCTCCTGTACATT +
Preference number: 4 (lower is better)
Translates to: PISLCSRSVKHGSQEPLSIKPAC*RILLYI
Trigger: AATGTACAGGAGGATTCTGCAGCAGGCAGGCTTTAT...AGAGAGAGGCTCCTGTGAGCCATGCTTGACACTCCTGGAGCACAGAGAAATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTAATAGAGCAGCCCCAGTaGAAAGTACTTTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: GQAWKVLADKVAWPPKILIEQPQ*KVLFVL
Trigger: AAGCACAAAAAGTACTTTGCACTGGGGCTGCTCTAT...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp TCCCCCACATTAGGAGTGAGCAGTCACAAGTCCTTTCTGAGACTGCACCCGTTCAAACTAGTCTGCTGCTaGTCGTCCAAAGGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: SPTLGVSSHKSFLRLHPFKLVCC*SSKGLL
Trigger: CAAGAGACCTTTGGACGAGCAGCAGCAGACTAGTTT...GAACGGGTGCAGTCTCAGAAAGGACTTGTGACTGCTCACTCCTAATGTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp AGTTGGCTTGTGCTTTGGATGACTGTAGCCTCCTGGACAGGGAGACTCTGGCCTTGGTACTCTTCTTTCTaGAATCTCCTGTCGATCACG +
Preference number: 4 (lower is better)
Translates to: SWLVLWMTVASWTGRLWPWYSSF*NLLSIT
Trigger: CGTGATCGACAGGAGATTGCAGAAAGAAGAGTACCA...AGGCCAGAGTCTCCCTGTCCAGGAGGCTACAGTCATCCAAAGCACAAGCCAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TCCCCCACATTAGGAGTGAGCAGTCACAAGTCCTTTCTGAGACTGCACCCGTTCCTGAAATTTCTCCTTTaGAATGTTCCTCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SPTLGVSSHKSFLRLHPFLKFLL*NVPPGS
Trigger: GGAGCCCGGAGGAACATTCCAAAGGAGAAATTTCAG...GAACGGGTGCAGTCTCAGAAAGGACTTGTGACTGCTCACTCCTAATGTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp AAGAGCTGCAGTTTGTCTGTGACAATGACAGATACCAAGTCCAGTTGGTCACAGTCCAGGAGGCTGTCGTaGTCAGCCTCTGCATACAGC +
Preference number: 4 (lower is better)
Translates to: KSCSLSVTMTDTKSSWSQSRRLS*SASAYS
Trigger: GCTGTATGCAGAGGCTGACCACGACAGCCTCCTGGA...CTGTGACCAACTGGACTTGGTATCTGTCATTGTCACAGACAAACTGCAGCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp CTGGATGGGAAGAACAGAAGCTATGTCCACTTTAGGGGCAGATGTGAAGACTATTCGCCCAGCTTCCCGTaGAGGATGGCACTTTCCATG +
Preference number: 4 (lower is better)
Translates to: LDGKNRSYVHFRGRCEDYSPSFP*RMALSM
Trigger: CATGGAAAGTGCCATCCTCCACGGGAAGCTGGGCGA...ATAGTCTTCACATCTGCCCCTAAAGTGGACATAGCTTCTGTTCTTCCCATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp CTGGATGGGAAGAACAGAAGCTATGTCCACTTTAGGGGCAGATGTGAAGACTATCAAGGGCCACCTGTGTaGTCCTCCTGGCATGGATAC +
Preference number: 4 (lower is better)
Translates to: LDGKNRSYVHFRGRCEDYQGPPV*SSWHGY
Trigger: GTATCCATGCCAGGAGGACCACACAGGTGGCCCTTG...ATAGTCTTCACATCTGCCCCTAAAGTGGACATAGCTTCTGTTCTTCCCATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TACCAAGTCCAGTTGGTCACAGATGAGACCTTTCCTCTGAGGGTTCAGGAAAGCTCACCGAAAGGGTTCTaGCAGAGCTGGCAAAGCTCT +
Preference number: 4 (lower is better)
Translates to: YQVQLVTDETFPLRVQESSPKGF*QSWQSS
Trigger: AGAGCTTTGCCAGCTCTGCCAGAACCCTTTCGGTGA...GCTTTCCTGAACCCTCAGAGGAAAGGTCTCATCTGTGACCAACTGGACTTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp AAGAGCTGCAGTTTGTCTGTGACAATGACAGATACCAAGTCCAGTTGGTCACAGAGCAAGAGGCTGCTCTaGGGTGGACACTTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: KSCSLSVTMTDTKSSWSQSKRLL*GGHFLD
Trigger: GTCAAGGAAGTGTCCACCCCAGAGCAGCCTCTTGCT...CTGTGACCAACTGGACTTGGTATCTGTCATTGTCACAGACAAACTGCAGCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp CTCTTTTCTGTTGCAGTCTTCAGGACAGGCAAAGCAGCTCCCCACTTAGACCTCCTGAAATTTCTCCTTTaGAATGTTCCTCCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LFSVAVFRTGKAAPHLDLLKFLL*NVPPGS
Trigger: GGAGCCCGGAGGAACATTCCAAAGGAGAAATTTCAG...GAGGTCTAAGTGGGGAGCTGCTTTGCCTGTCCTGAAGACTGCAACAGAAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TCCCCCACATTAGGAGTGAGCAGTCACAAGTCCTTTCTGAGACTGCACCCGTTCATGGCAAGGTGGGTGTaGTACTCTTCTTTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: SPTLGVSSHKSFLRLHPFMARWV*YSSFCN
Trigger: ATTGCAGAAAGAAGAGTACCACACCCACCTTGCCAT...GAACGGGTGCAGTCTCAGAAAGGACTTGTGACTGCTCACTCCTAATGTGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TTGAATTCAGGTTGTCAGGCTTGGTGGCAAGTGCCTTTGCCCACTGAATCATTTCCTGTGTGGTCCTCCTaGCATGGATACTGTCCCTCA +
Preference number: 4 (lower is better)
Translates to: LNSGCQAWWQVPLPTESFPVWSS*HGYCPS
Trigger: TGAGGGACAGTATCCATGCCAGGAGGACCACACAGG...AAATGATTCAGTGGGCAAAGGCACTTGCCACCAAGCCTGACAACCTGAATTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CAA 72 bp TACATCCACACAAAGAACAATCAGCAGTCAGTGCCCTaGTTTCCCAGGGATAGCATCTTCCTGGCACCCAGA +
Preference number: 4 (lower is better)
Translates to: YIHTKNNQQSVP*FPRDSIFLAPR
Trigger: TCTGGGTGCCAGGAAGATGCTATCCCTGGGAAACAAGGGCACTGACTGCTGATTGTTCTTTGTGTGGATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CAA 72 bp CTTCCAGATACGAATGTGACCCAAGCTCAGCCAGTGTaGCTCCAGCTAGGATGGTTTTACAGAGCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: LPDTNVTQAQPV*LQLGWFYRAVV
Trigger: CACAACAGCTCTGTAAAACCATCCTAGCTGGAGCAACACTGGCTGAGCTTGGGTCACATTCGTATCTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp TGTTTCCCAGGGATAGCATCTTCCTGGCACCCAGATGCCTCCCCTTTGTTCTGGCTCTTGGTGAAAATTTaGACTCCAATCTCCTCACTT +
Preference number: 4 (lower is better)
Translates to: CFPGIASSWHPDASPLFWLLVKI*TPISSL
Trigger: AAGTGAGGAGATTGGAGTTCAAATTTTCACCAAGAG...CCAGAACAAAGGGGAGGCATCTGGGTGCCAGGAAGATGCTATCCCTGGGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp TACAGGGCAGAGGCCAGTGTGAGCCTCTCCTGGAAGGCTCACTGGTTTACTGATCTCTTGGTGAAAATTTaGACTCCAATCTCCTCACTT +
Preference number: 4 (lower is better)
Translates to: YRAEASVSLSWKAHWFTDLLVKI*TPISSL
Trigger: AAGTGAGGAGATTGGAGTTCAAATTTTCACCAAGAG...ATCAGTAAACCAGTGAGCCTTCCAGGAGAGGCTCACACTGGCCTCTGCCCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp TGTTTCCCAGGGATAGCATCTTCCTGGCACCCAGATGCCTCCCCTTTGTTCTGGCCAAAGGTCTCTTGGTaGAAATTTGAACTCCAATCT +
Preference number: 4 (lower is better)
Translates to: CFPGIASSWHPDASPLFWPKVSW*KFELQS
Trigger: AGATTGGAGTTCAAATTTTCACCAAGAGACCTTTGG...CCAGAACAAAGGGGAGGCATCTGGGTGCCAGGAAGATGCTATCCCTGGGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp CTCTTTTCTGTTGCAGTCTTCAGGACAGGCAAAGCAGCTCCCCACTTAGACCTCAAACTGTATAAAGCCTaGCTGCTGCAGAATCCTCCT +
Preference number: 4 (lower is better)
Translates to: LFSVAVFRTGKAAPHLDLKLYKA*LLQNPP
Trigger: AGGAGGATTCTGCAGCAGGCAGGCTTTATACAGTTT...GAGGTCTAAGTGGGGAGCTGCTTTGCCTGTCCTGAAGACTGCAACAGAAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TTGAATTCAGGTTGTCAGGCTTGGTGGCAAGTGCCTTTGCCCACTGAATCATTTCACTCAATGCTGATGTaGTCTCTGTCGCCCATCAGC +
Preference number: 4 (lower is better)
Translates to: LNSGCQAWWQVPLPTESFHSMLM*SLSPIS
Trigger: GCTGATGGGCGACAGAGACCACATCAGCATTGAGTG...AAATGATTCAGTGGGCAAAGGCACTTGCCACCAAGCCTGACAACCTGAATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp AAGAGCTGCAGTTTGTCTGTGACAATGACAGATACCAAGTCCAGTTGGTCACAGTGGCCTGTGTCTCAGTaGCTTCTACATCTTTGCCCC +
Preference number: 4 (lower is better)
Translates to: KSCSLSVTMTDTKSSWSQWPVSQ*LLHLCP
Trigger: GGGGCAAAGATGTAGAAGCCACTGAGACACAGGCCA...CTGTGACCAACTGGACTTGGTATCTGTCATTGTCACAGACAAACTGCAGCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp CTGGATGGGAAGAACAGAAGCTATGTCCACTTTAGGGGCAGATGTGAAGACTATGTAGTCTCCGGAGTTTaGCCTGTGTCTCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LDGKNRSYVHFRGRCEDYVVSGV*PVSQWL
Trigger: AAGCCACTGAGACACAGGCCAAACTCCGGAGACTAC...ATAGTCTTCACATCTGCCCCTAAAGTGGACATAGCTTCTGTTCTTCCCATCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TTGAATTCAGGTTGTCAGGCTTGGTGGCAAGTGCCTTTGCCCACTGAATCATTTTCAGGTTTTCTGATTTaGCCAGGCCAAGGGCCACCT +
Preference number: 4 (lower is better)
Translates to: LNSGCQAWWQVPLPTESFSGFLI*PGQGPP
Trigger: AGGTGGCCCTTGGCCTGGCCAAATCAGAAAACCTGA...AAATGATTCAGTGGGCAAAGGCACTTGCCACCAAGCCTGACAACCTGAATTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CAA 72 bp TTGAATTCAGGTTGTCAGGCTTGGTGGCAAGTGCCTTaGCCCACTGAATCATTTCACCGTCCCATCTACTTC +
Preference number: 4 (lower is better)
Translates to: LNSGCQAWWQVP*PTESFHRPIYF
Trigger: GAAGTAGATGGGACGGTGAAATGATTCAGTGGGCAAAGGCACTTGCCACCAAGCCTGACAACCTGAATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp TTGAATTCAGGTTGTCAGGCTTGGTGGCAAGTGCCTTTGCCCACTGAATCATTTCGTTCACAGGTTTCTTaGAGCCCAGGTGTCTGTGTA +
Preference number: 4 (lower is better)
Translates to: LNSGCQAWWQVPLPTESFRSQVS*SPGVCV
Trigger: TACACAGACACCTGGGCTTCAAGAAACCTGTGAACG...AAATGATTCAGTGGGCAAAGGCACTTGCCACCAAGCCTGACAACCTGAATTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp TACCAAGTCCAGTTGGTCACAGATGAGACCTTTCCTCTGAGGGTTCAGGAAAGCTGCTGTAGTTCAGGATaGTGTATTGTGTGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: YQVQLVTDETFPLRVQESCCSSG*CIVWSR
Trigger: CCTTGACCACACAATACATCATCCTGAACTACAGCA...GCTTTCCTGAACCCTCAGAGGAAAGGTCTCATCTGTGACCAACTGGACTTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp TACCAAGTCCAGTTGGTCACAGATGAGACCTTTCCTCTGAGGGTTCAGGAAAGCCAGGAACTGGAGTTGTaGAAACTGTATAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: YQVQLVTDETFPLRVQESQELEL*KLYKAC
Trigger: GCAGGCTTTATACAGTTTGCACAACTCCAGTTCCTG...GCTTTCCTGAACCCTCAGAGGAAAGGTCTCATCTGTGACCAACTGGACTTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp CTCTTTTCTGTTGCAGTCTTCAGGACAGGCAAAGCAGCTCCCCACTTAGACCTCTTGGCTTCCAGGAACTaGAGTTGTGCAAACTGTATA +
Preference number: 4 (lower is better)
Translates to: LFSVAVFRTGKAAPHLDLLASRN*SCANCI
Trigger: TATACAGTTTGCACAACTCCAGTTCCTGGAAGCCAA...GAGGTCTAAGTGGGGAGCTGCTTTGCCTGTCCTGAAGACTGCAACAGAAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp CTCTTTTCTGTTGCAGTCTTCAGGACAGGCAAAGCAGCTCCCCACTTAGACCTCCTCCTGTACATTACCTaGAATTTCTCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: LFSVAVFRTGKAAPHLDLLLYIT*NFSFGM
Trigger: CATTCCAAAGGAGAAATTTCAGGTAATGTACAGGAG...GAGGTCTAAGTGGGGAGCTGCTTTGCCTGTCCTGAAGACTGCAACAGAAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp CTCTTTTCTGTTGCAGTCTTCAGGACAGGCAAAGCAGCTCCCCACTTAGACCTCCCAAAGGTCTCTTGGTaGAAATTTGAACTCCAATCT +
Preference number: 4 (lower is better)
Translates to: LFSVAVFRTGKAAPHLDLPKVSW*KFELQS
Trigger: AGATTGGAGTTCAAATTTTCACCAAGAGACCTTTGG...GAGGTCTAAGTGGGGAGCTGCTTTGCCTGTCCTGAAGACTGCAACAGAAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp AAGAGCTGCAGTTTGTCTGTGACAATGACAGATACCAAGTCCAGTTGGTCACAGGCAAAGTACTTTTTGTaGTTCTCCAGCCAGGCAGCA +
Preference number: 4 (lower is better)
Translates to: KSCSLSVTMTDTKSSWSQAKYFL*FSSQAA
Trigger: TGCTGCCTGGCTGGAGAAGCACAAAAAGTACTTTGC...CTGTGACCAACTGGACTTGGTATCTGTCATTGTCACAGACAAACTGCAGCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp CTGGATGGGAAGAACAGAAGCTATGTCCACTTTAGGGGCAGATGTGAAGACTATAAACTAGTCTGCTGCTaGTCGTCCAAAGGTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LDGKNRSYVHFRGRCEDYKLVCC*SSKGLL
Trigger: CAAGAGACCTTTGGACGAGCAGCAGCAGACTAGTTT...ATAGTCTTCACATCTGCCCCTAAAGTGGACATAGCTTCTGTTCTTCCCATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TTGAATTCAGGTTGTCAGGCTTGGTGGCAAGTGCCTTTGCCCACTGAATCATTTCACAAGCCCTCCATTTaGGTATCTGACAAACACAGG +
Preference number: 4 (lower is better)
Translates to: LNSGCQAWWQVPLPTESFHKPSI*VSDKHR
Trigger: CCTGTGTTTGTCAGATACCCAAATGGAGGGCTTGTG...AAATGATTCAGTGGGCAAAGGCACTTGCCACCAAGCCTGACAACCTGAATTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CAA 72 bp AGAAATACACCAATCATTGTAAGTGCAGAGATCCTTTaGTCAAGAATGGACAGGGAATGGGGGTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: RNTPIIVSAEIL*SRMDREWGWAG
Trigger: CCCTGCCCACCCCCATTCCCTGTCCATTCTTGACAAAAGGATCTCTGCACTTACAATGATTGGTGTATTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp CTGGATGGGAAGAACAGAAGCTATGTCCACTTTAGGGGCAGATGTGAAGACTATGGATTAAAACTAGTCTaGTGCTGCTCGTCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: LDGKNRSYVHFRGRCEDYGLKLV*CCSSKG
Trigger: ACCTTTGGACGAGCAGCAGCAGACTAGTTTTAATCC...ATAGTCTTCACATCTGCCCCTAAAGTGGACATAGCTTCTGTTCTTCCCATCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp AAGAGCTGCAGTTTGTCTGTGACAATGACAGATACCAAGTCCAGTTGGTCACAGGGATTAAAACTAGTCTaGTGCTGCTCGTCCAAAGGT +
Preference number: 4 (lower is better)
Translates to: KSCSLSVTMTDTKSSWSQGLKLV*CCSSKG
Trigger: ACCTTTGGACGAGCAGCAGCAGACTAGTTTTAATCC...CTGTGACCAACTGGACTTGGTATCTGTCATTGTCACAGACAAACTGCAGCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp CTGGATGGGAAGAACAGAAGCTATGTCCACTTTAGGGGCAGATGTGAAGACTATTGGTACTCTTCTTTCTaGAATCTCCTGTCGATCACG +
Preference number: 4 (lower is better)
Translates to: LDGKNRSYVHFRGRCEDYWYSSF*NLLSIT
Trigger: CGTGATCGACAGGAGATTGCAGAAAGAAGAGTACCA...ATAGTCTTCACATCTGCCCCTAAAGTGGACATAGCTTCTGTTCTTCCCATCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR GCA 90 bp CTGGATGGGAAGAACAGAAGCTATGTCCACTTTAGGGGCAGATGTGAAGACTATATAGAGCAGCCCCAGTaGAAAGTACTTTTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: LDGKNRSYVHFRGRCEDYIEQPQ*KVLFVL
Trigger: AAGCACAAAAAGTACTTTGCACTGGGGCTGCTCTAT...ATAGTCTTCACATCTGCCCCTAAAGTGGACATAGCTTCTGTTCTTCCCATCCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CCA 90 bp TTGAATTCAGGTTGTCAGGCTTGGTGGCAAGTGCCTTTGCCCACTGAATCATTTTTGGCTTCCAGGAACTaGAGTTGTGCAAACTGTATA +
Preference number: 4 (lower is better)
Translates to: LNSGCQAWWQVPLPTESFLASRN*SCANCI
Trigger: TATACAGTTTGCACAACTCCAGTTCCTGGAAGCCAA...AAATGATTCAGTGGGCAAAGGCACTTGCCACCAAGCCTGACAACCTGAATTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR TCA 90 bp CTGGATGGGAAGAACAGAAGCTATGTCCACTTTAGGGGCAGATGTGAAGACTATCTCCTGTACATTACCTaGAATTTCTCCTTTGGAATG +
Preference number: 4 (lower is better)
Translates to: LDGKNRSYVHFRGRCEDYLLYIT*NFSFGM
Trigger: CATTCCAAAGGAGAAATTTCAGGTAATGTACAGGAG...ATAGTCTTCACATCTGCCCCTAAAGTGGACATAGCTTCTGTTCTTCCCATCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CAA 72 bp TACGAAGATGATATGAATTCAAATAAAAACACTGAGTaGTGTATGTCCGTCGAGGCGTTTCCAGTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: YEDDMNSNKNTE*CMSVEAFPVRK
Trigger: CTTCCTGACTGGAAACGCCTCGACGGACATACACAACTCAGTGTTTTTATTTGAATTCATATCATCTTCGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
3UTR CAA 72 bp TGTTATATATTCATCTTAAAAATGGGATTTGTGAAATaGCCCCTGGGAGAGTGTGAAGAAGGTAAGGAAGTA +
Preference number: 4 (lower is better)
Translates to: CYIFILKMGFVK*PLGECEEGKEV
Trigger: TACTTCCTTACCTTCTTCACACTCTCCCAGGGGCAATTTCACAAATCCCATTTTTAAGATGAATATATAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS GCA 90 bp GAGGTACATGGCGAGCAACGTGTGGAAGAGGCGCTGACGGCAGGCTaGACCCTGACCCTCGGAGCTCCACAGGCAGTAGTCCTCAGCTGC +
Preference number: 5 (lower is better)
Translates to: EVHGEQRVEEALTAG*TLTLGAPQAVVLSC
Trigger: GCAGCTGAGGACTACTGCCTGTGGAGCTCCGAGGGTCAGGGTGCAGCCTGCCGTCAGCGCCTCTTCCACACGTTGCTCGCCATGTACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS GCA 90 bp CAGCAAGTCCACAGCGGCCACTGTCAGATCCTGGGCAGAGGGGCCTaGACGGAGGTACATGGCGAGCAACGTGTGGAAGAGGCGCTGACG +
Preference number: 5 (lower is better)
Translates to: QQVHSGHCQILGRGA*TEVHGEQRVEEALT
Trigger: CGTCAGCGCCTCTTCCACACGTTGCTCGCCATGTACCTCCGTGCAGGCCCCTCTGCCCAGGATCTGACAGTGGCCGCTGTGGACTTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CCA 90 bp TGCACCAGGATGTGCAGGGCCTTCTCGTGCTCGCCCAGCTTCCCGTaGAGGATGGCACTTTCCATGGGCAGGCCGGCACCCTGGACTTTC +
Preference number: 5 (lower is better)
Translates to: CTRMCRAFSCSPSFP*RMALSMGRPAPWTF
Trigger: GAAAGTCCAGGGTGCCGGCCTGCCCATGGAAAGTGCCATCCTCCACGGGAAGCTGGGCGAGCACGAGAAGGCCCTGCACATCCTGGTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS GCA 90 bp GGCTGCACCCTGACCCTCGGAGCTCCACAGGCAGTAGTCCTCAGCTaGAGAGAAGTCCCCCATCTCGTGCACCAGGATGTGCAGGGCCTT +
Preference number: 5 (lower is better)
Translates to: GCTLTLGAPQAVVLS*REVPHLVHQDVQGL
Trigger: AAGGCCCTGCACATCCTGGTGCACGAGATGGGGGACTTCTCTGCAGCTGAGGACTACTGCCTGTGGAGCTCCGAGGGTCAGGGTGCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CCA 90 bp CCAGGGCTGGGCGAGCTGGGGGCCGTGTGTCTGCTGGCGGCACAGTaGGTGTGCACAAGCCCTCCATTTGGGTATCTGACAAACACAGGT +
Preference number: 5 (lower is better)
Translates to: PGLGELGAVCLLAAQ*VCTSPPFGYLTNTG
Trigger: ACCTGTGTTTGTCAGATACCCAAATGGAGGGCTTGTGCACACCCACTGTGCCGCCAGCAGACACACGGCCCCCAGCTCGCCCAGCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS GCA 90 bp TGGATACTGTCCCTCATAGCCCCCATGAGGAATGGGCAGAGAAGCTaGACGGACCAGGTGTCTGGCAGCAGCTGTAGGACCTGGGTGACA +
Preference number: 5 (lower is better)
Translates to: WILSLIAPMRNGQRS*TDQVSGSSCRTWVT
Trigger: TGTCACCCAGGTCCTACAGCTGCTGCCAGACACCTGGTCCGTGCAGCTTCTCTGCCCATTCCTCATGGGGGCTATGAGGGACAGTATCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CCA 90 bp GCCAGCCAGCAGGAACTCCTGTCTGCCTATCCTCTTGACGATGGGTaGCTTCTCCTCACTGCAGTAGGGAAACAGGTCCTGGGAAAGGCC +
Preference number: 5 (lower is better)
Translates to: ASQQELLSAYPLDDG*LLLTAVGKQVLGKA
Trigger: GGCCTTTCCCAGGACCTGTTTCCCTACTGCAGTGAGGAGAAGCCACCCATCGTCAAGAGGATAGGCAGACAGGAGTTCCTGCTGGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CCA 90 bp TCTGATTTGGCCAGGCCAAGGGCCACCTGTGTGGTCCTCCTGGCATaGATACTGTCCCTCATAGCCCCCATGAGGAATGGGCAGAGAAGC +
Preference number: 5 (lower is better)
Translates to: SDLARPRATCVVLLA*ILSLIAPMRNGQRS
Trigger: GCTTCTCTGCCCATTCCTCATGGGGGCTATGAGGGACAGTATCCATGCCAGGAGGACCACACAGGTGGCCCTTGGCCTGGCCAAATCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp AGAGTCACCACCCTGGGGGTGGCTCTGAGACTTCAAAGAGAGCAGGGAAATGGCAGCACCAGCAGCCTATaGAGAGCTGAGGCCGCACAC +
Preference number: 5 (lower is better)
Translates to: RVTTLGVALRLQREQGNGSTSSL*RAEAAH
Trigger: GTGTGCGGCCTCAGCTCTCAATAGGCTGCTGGTGCT...GCCATTTCCCTGCTCTCTTTGAAGTCTCAGAGCCACCCCCAGGGTGGTGACTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS TCA 90 bp GCTGGTTCAGGTCTGCGTACTCATGAAGAGGAGGGTGAGAGCGGGTaGAGGAGGAGGAGGTGGGCAGCAGAAAGGGGTAGAGAGAGATCA +
Preference number: 5 (lower is better)
Translates to: AGSGLRTHEEEGESG*RRRRWAAERGRERS
Trigger: TGATCTCTCTCTACCCCTTTCTGCTGCCCACCTCCTCCTCCTTCACCCGCTCTCACCCTCCTCTTCATGAGTACGCAGACCTGAACCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000188728.2
CDS TCA 90 bp GAAGCTGCACGGACCAGGTGTCTGGCAGCAGCTGTAGGACCTGGGTaGCATCAAATTCCCTGGCATGATGGTTCAGCAAGTCCACAGCGG +
Preference number: 5 (lower is better)
Translates to: EAARTRCLAAAVGPG*HQIPWHDGSASPQR
Trigger: CCGCTGTGGACTTGCTGAACCATCATGCCAGGGAATTTGATGTCACCCAGGTCCTACAGCTGCTGCCAGACACCTGGTCCGTGCAGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp TACAGGGCAGAGGCCAGTGTGAGCCTCTCCTGGAAGGCTCACTGGTTTACTGATAGCACCAGCAGCCTATaGAGAGCTGAGGCCGCACAC +
Preference number: 5 (lower is better)
Translates to: YRAEASVSLSWKAHWFTDSTSSL*RAEAAH
Trigger: GTGTGCGGCCTCAGCTCTCAATAGGCTGCTGGTGCT...ATCAGTAAACCAGTGAGCCTTCCAGGAGAGGCTCACACTGGCCTCTGCCCTGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp AGAGTCACCACCCTGGGGGTGGCTCTGAGACTTCAAAGAGAGCAGGGAAATGGCTCCTCCGGGCTCCTTTaGCCAAGACCAAAGCCTCCT +
Preference number: 5 (lower is better)
Translates to: RVTTLGVALRLQREQGNGSSGLL*PRPKPP
Trigger: AGGAGGCTTTGGTCTTGGCAAAAGGAGCCCGGAGGA...GCCATTTCCCTGCTCTCTTTGAAGTCTCAGAGCCACCCCCAGGGTGGTGACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp GCTAGGAGGACAGATTCCTGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGTCCTCCGGGCTCCTTTaGCCAAGACCAAAGCCTCCT +
Preference number: 5 (lower is better)
Translates to: ARRTDSCGIASRKQGLPQSSGLL*PRPKPP
Trigger: AGGAGGCTTTGGTCTTGGCAAAAGGAGCCCGGAGGA...CTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACAGGAATCTGTCCTCCTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CCA 90 bp GGAGTTTGGCCTGTGTCTCAGTGGCTTCTACATCTTTGCCCCCAGTaGATACCCTCTGCCGCAGCACTTCCTCCAGGTAGAGGATGGCAA +
Preference number: 5 (lower is better)
Translates to: GVWPVSQWLLHLCPQ*IPSAAALPPGRGWQ
Trigger: TTGCCATCCTCTACCTGGAGGAAGTGCTGCGGCAGAGGGTATCCACTGGGGGCAAAGATGTAGAAGCCACTGAGACACAGGCCAAACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CCA 90 bp AGCTTCCCGTGGAGGATGGCACTTTCCATGGGCAGGCCGGCACCCTaGACTTTCTCTTTCAACAAGTGGACGCGGTACAAGTCAGACTTC +
Preference number: 5 (lower is better)
Translates to: SFPWRMALSMGRPAP*TFSFNKWTRYKSDF
Trigger: GAAGTCTGACTTGTACCGCGTCCACTTGTTGAAAGAGAAAGTCCAGGGTGCCGGCCTGCCCATGGAAAGTGCCATCCTCCACGGGAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CCA 90 bp CGTGTGTCTGCTGGCGGCACAGTGGGTGTGCACAAGCCCTCCATTTaGGTATCTGACAAACACAGGTTCACCGAAAGGGTTCTGGCAGAG +
Preference number: 5 (lower is better)
Translates to: RVSAGGTVGVHKPSI*VSDKHRFTERVLAE
Trigger: CTCTGCCAGAACCCTTTCGGTGAACCTGTGTTTGTCAGATACCCAAATGGAGGGCTTGTGCACACCCACTGTGCCGCCAGCAGACACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp TGTTTCCCAGGGATAGCATCTTCCTGGCACCCAGATGCCTCCCCTTTGTTCTGGCTTCTCCTGGTCACCTaGGGTCAGCTGGTTCAGGTC +
Preference number: 5 (lower is better)
Translates to: CFPGIASSWHPDASPLFWLLLVT*GQLVQV
Trigger: GACCTGAACCAGCTGACCCAAGGTGACCAGGAGAAG...CCAGAACAAAGGGGAGGCATCTGGGTGCCAGGAAGATGCTATCCCTGGGAAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp AGAGTCACCACCCTGGGGGTGGCTCTGAGACTTCAAAGAGAGCAGGGAAATGGCAGTAGTCTCCGGAGTTaGGCCTGTGTCTCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: RVTTLGVALRLQREQGNGSSLRS*ACVSVA
Trigger: AGCCACTGAGACACAGGCCAAACTCCGGAGACTACT...GCCATTTCCCTGCTCTCTTTGAAGTCTCAGAGCCACCCCCAGGGTGGTGACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS TCA 90 bp CCTCATACACCAGAAACATTTGGACAGTCCTGCGCTTCACGGAAATaGTGCACACCTCCACGCAGAACGGGTCCCCATTCACGGGGCTCT +
Preference number: 5 (lower is better)
Translates to: PHTPETFGQSCASRK*CTPPRRTGPHSRGS
Trigger: AGAGCCCCGTGAATGGGGACCCGTTCTGCGTGGAGGTGTGCATCATTTCCGTGAAGCGCAGGACTGTCCAAATGTTTCTGGTGTATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS GCA 90 bp GCCACAGCAAGAGGCTGCTCTGGGGTGGACACTTCCTTGACAATCTaGACTCGGTCCTCATACACCAGAAACATTTGGACAGTCCTGCGC +
Preference number: 5 (lower is better)
Translates to: ATARGCSGVDTSLTI*TRSSYTRNIWTVLR
Trigger: GCGCAGGACTGTCCAAATGTTTCTGGTGTATGAGGACCGAGTGCAGATTGTCAAGGAAGTGTCCACCCCAGAGCAGCCTCTTGCTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS GCA 90 bp ATTCTCAGTGACCAAGAGGTCCAGGAGGCTGTCGTGGTCAGCCTCTaGATACAGCTTGAGCAAGGCCGTGTCGATGTCTTCCTTGTAGCC +
Preference number: 5 (lower is better)
Translates to: ILSDQEVQEAVVVSL*IQLEQGRVDVFLVA
Trigger: GGCTACAAGGAAGACATCGACACGGCCTTGCTCAAGCTGTATGCAGAGGCTGACCACGACAGCCTCCTGGACCTCTTGGTCACTGAGAAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000188728.2
CDS CCA 90 bp AGTCAGACTTCTGGAGTAGTCTCCGGAGTTTGGCCTGTGTCTCAGTaGCTTCTACATCTTTGCCCCCAGTGGATACCCTCTGCCGCAGCA +
Preference number: 5 (lower is better)
Translates to: SQTSGVVSGVWPVSQ*LLHLCPQWIPSAAA
Trigger: TGCTGCGGCAGAGGGTATCCACTGGGGGCAAAGATGTAGAAGCCACTGAGACACAGGCCAAACTCCGGAGACTACTCCAGAAGTCTGACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CCA 90 bp GGGTATCTGACAAACACAGGTTCACCGAAAGGGTTCTGGCAGAGCTaGCAAAGCTCTCGTTCTGAGAGCCGGACTGCATTGCCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: GYLTNTGSPKGFWQS*QSSRSESRTALPFS
Trigger: GCTGAAGGGCAATGCAGTCCGGCTCTCAGAACGAGAGCTTTGCCAGCTCTGCCAGAACCCTTTCGGTGAACCTGTGTTTGTCAGATACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp TGTTTCCCAGGGATAGCATCTTCCTGGCACCCAGATGCCTCCCCTTTGTTCTGGCTCATGAGGAAGCGCTaGCACTTGGCCATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: CFPGIASSWHPDASPLFWLMRKR*HLAIFS
Trigger: GGAGAAGATGGCCAAGTGCAAGCGCTTCCTCATGAG...CCAGAACAAAGGGGAGGCATCTGGGTGCCAGGAAGATGCTATCCCTGGGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp TGTTTCCCAGGGATAGCATCTTCCTGGCACCCAGATGCCTCCCCTTTGTTCTGGATCAGGTTTTCTGATTaGGCCAGGCCAAGGGCCACC +
Preference number: 5 (lower is better)
Translates to: CFPGIASSWHPDASPLFWIRFSD*ARPRAT
Trigger: GGTGGCCCTTGGCCTGGCCAAATCAGAAAACCTGAT...CCAGAACAAAGGGGAGGCATCTGGGTGCCAGGAAGATGCTATCCCTGGGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS TCA 90 bp TGCCGACATAAAGATTCCTGCCACAGCACTCCACACACTCAATGCTaGTGTGGTCTCTGTCGCCCATCAGCAGTTCCCGTTCCACTGCAG +
Preference number: 5 (lower is better)
Translates to: CRHKDSCHSTPHTQC*CGLCRPSAVPVPLQ
Trigger: CTGCAGTGGAACGGGAACTGCTGATGGGCGACAGAGACCACATCAGCATTGAGTGTGTGGAGTGCTGTGGCAGGAATCTTTATGTCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000189010.2
CDS TCA 90 bp CAGGGTTATAGAGTTGTCACAGAGCACCAGCAGCCTATTGAGAGCTaGGGCCGCACACAGCTCGTTCACAGGTTTCTTGAAGCCCAGGTG +
Preference number: 5 (lower is better)
Translates to: QGYRVVTEHQQPIES*GRTQLVHRFLEAQV
Trigger: CACCTGGGCTTCAAGAAACCTGTGAACGAGCTGTGTGCGGCCTCAGCTCTCAATAGGCTGCTGGTGCTCTGTGACAACTCTATAACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000189010.2
CDS CCA 90 bp AGCAAGCAGAAATTCTCAGTGACCAAGAGGTCCAGGAGGCTGTCGTaGTCAGCCTCTGCATACAGCTTGAGCAAGGCCGTGTCGATGTCT +
Preference number: 5 (lower is better)
Translates to: SKQKFSVTKRSRRLS*SASAYSLSKAVSMS
Trigger: AGACATCGACACGGCCTTGCTCAAGCTGTATGCAGAGGCTGACCACGACAGCCTCCTGGACCTCTTGGTCACTGAGAATTTCTGCTTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000188728.2
CDS-3UTR CAA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTAGTTCAGGATGATGTATaGTGTGGTCAAGGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: GQAWKVLADKVAWPPKILVQDDV*CGQGQA
Trigger: TGCCTGGCCTTGACCACACAATACATCATCCTGAAC...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp GCTAGGAGGACAGATTCCTGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGGTTCAGGATGATGTATaGTGTGGTCAAGGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: ARRTDSCGIASRKQGLPQVQDDV*CGQGQA
Trigger: TGCCTGGCCTTGACCACACAATACATCATCCTGAAC...CTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACAGGAATCTGTCCTCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTACTTCTGAAGAGCTCTTaGGCTTCCAGGAACTGGAGT +
Preference number: 5 (lower is better)
Translates to: GQAWKVLADKVAWPPKILLLKSS*ASRNWS
Trigger: ACTCCAGTTCCTGGAAGCCAAAGAGCTCTTCAGAAG...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp TGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGTTGTGCAACAGGTGCCGTCTTCTGAAGAGCTCTTaGGCTTCCAGGAACTGGAGT +
Preference number: 5 (lower is better)
Translates to: CGIASRKQGLPQLCNRCRLLKSS*ASRNWS
Trigger: ACTCCAGTTCCTGGAAGCCAAAGAGCTCTTCAGAAG...ACGGCACCTGTTGCACAACTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS TCA 90 bp GCTCTCGTTCACTGCAAATGTTGTAGCCCCTTTGATGCGGGCTCCTaGGGGGACTGGCTCCAGGTTCAGCATGTTAACCAGGGTTATAGA +
Preference number: 5 (lower is better)
Translates to: ALVHCKCCSPFDAGS*GDWLQVQHVNQGYR
Trigger: TCTATAACCCTGGTTAACATGCTGAACCTGGAGCCAGTCCCCTCAGGAGCCCGCATCAAAGGGGCTACAACATTTGCAGTGAACGAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS TCA 90 bp CATCCACAGCCACAGCAAGAGGCTGCTCTGGGGTGGACACTTCCTTaGCAATCTGCACTCGGTCCTCATACACCAGAAACATTTGGACAG +
Preference number: 5 (lower is better)
Translates to: HPQPQQEAALGWTLP*QSALGPHTPETFGQ
Trigger: CTGTCCAAATGTTTCTGGTGTATGAGGACCGAGTGCAGATTGTCAAGGAAGTGTCCACCCCAGAGCAGCCTCTTGCTGTGGCTGTGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CCA 90 bp AGTGGACGCGGTACAAGTCAGACTTCTGGAGTAGTCTCCGGAGTTTaGCCTGTGTCTCAGTGGCTTCTACATCTTTGCCCCCAGTGGATA +
Preference number: 5 (lower is better)
Translates to: SGRGTSQTSGVVSGV*PVSQWLLHLCPQWI
Trigger: TATCCACTGGGGGCAAAGATGTAGAAGCCACTGAGACACAGGCCAAACTCCGGAGACTACTCCAGAAGTCTGACTTGTACCGCGTCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CCA 90 bp CCTCCATTTGGGTATCTGACAAACACAGGTTCACCGAAAGGGTTCTaGCAGAGCTGGCAAAGCTCTCGTTCTGAGAGCCGGACTGCATTG +
Preference number: 5 (lower is better)
Translates to: PPFGYLTNTGSPKGF*QSWQSSRSESRTAL
Trigger: CAATGCAGTCCGGCTCTCAGAACGAGAGCTTTGCCAGCTCTGCCAGAACCCTTTCGGTGAACCTGTGTTTGTCAGATACCCAAATGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTATGTCTGTGTAGCTGTTaGGTGGCAACGAATGTAGCT +
Preference number: 5 (lower is better)
Translates to: GQAWKVLADKVAWPPKILCLCSC*VATNVA
Trigger: AGCTACATTCGTTGCCACCAAACAGCTACACAGACA...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp AGAGTCACCACCCTGGGGGTGGCTCTGAGACTTCAAAGAGAGCAGGGAAATGGCCCTCCACTCTCCGGTTaGCTAACAGATCCTGTATTT +
Preference number: 5 (lower is better)
Translates to: RVTTLGVALRLQREQGNGPPLSG*LTDPVF
Trigger: AAATACAGGATCTGTTAGCAAACCGGAGAGTGGAGG...GCCATTTCCCTGCTCTCTTTGAAGTCTCAGAGCCACCCCCAGGGTGGTGACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp TACCAAGTCCAGTTGGTCACAGATGAGACCTTTCCTCTGAGGGTTCAGGAAAGCCTTCTCCTGGTCACCTaGGGTCAGCTGGTTCAGGTC +
Preference number: 5 (lower is better)
Translates to: YQVQLVTDETFPLRVQESLLLVT*GQLVQV
Trigger: GACCTGAACCAGCTGACCCAAGGTGACCAGGAGAAG...GCTTTCCTGAACCCTCAGAGGAAAGGTCTCATCTGTGACCAACTGGACTTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp GGGCAGGCATGGAAAGTGCTGGCAGATAAGGTGGCCTGGCCTCCTAAGATCCTAAGTGCAAAGTACTTTTaGTGCTTCTCCAGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: GQAWKVLADKVAWPPKILSAKYF*CFSSQA
Trigger: TGCCTGGCTGGAGAAGCACAAAAAGTACTTTGCACT...TAGGATCTTAGGAGGCCAGGCCACCTTATCTGCCAGCACTTTCCATGCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp GCTAGGAGGACAGATTCCTGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGAGTGCAAAGTACTTTTaGTGCTTCTCCAGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: ARRTDSCGIASRKQGLPQSAKYF*CFSSQA
Trigger: TGCCTGGCTGGAGAAGCACAAAAAGTACTTTGCACT...CTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACAGGAATCTGTCCTCCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp TCCCCCACATTAGGAGTGAGCAGTCACAAGTCCTTTCTGAGACTGCACCCGTTCCCTGAAATTTCTCCTTaGGAATGTTCCTCCGGGCTC +
Preference number: 5 (lower is better)
Translates to: SPTLGVSSHKSFLRLHPFPEISP*ECSSGL
Trigger: GAGCCCGGAGGAACATTCCAAAGGAGAAATTTCAGG...GAACGGGTGCAGTCTCAGAAAGGACTTGTGACTGCTCACTCCTAATGTGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CCA 90 bp ACTTCCTTGACAATCTGCACTCGGTCCTCATACACCAGAAACATTTaGACAGTCCTGCGCTTCACGGAAATGATGCACACCTCCACGCAG +
Preference number: 5 (lower is better)
Translates to: TSLTICTRSSYTRNI*TVLRFTEMMHTSTQ
Trigger: CTGCGTGGAGGTGTGCATCATTTCCGTGAAGCGCAGGACTGTCCAAATGTTTCTGGTGTATGAGGACCGAGTGCAGATTGTCAAGGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CCA 90 bp ACATCCAGCTGGCTGCTTCTGAAGAGCTCTTTGGCTTCCAGGAACTaGAGTTGTGCAAACTGTATAAAGCCTGCCTGCTGCAGAATCCTC +
Preference number: 5 (lower is better)
Translates to: TSSWLLLKSSLASRN*SCANCIKPACCRIL
Trigger: GAGGATTCTGCAGCAGGCAGGCTTTATACAGTTTGCACAACTCCAGTTCCTGGAAGCCAAAGAGCTCTTCAGAAGCAGCCAGCTGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000188728.2
CDS-3UTR CAA 90 bp TACAGGGCAGAGGCCAGTGTGAGCCTCTCCTGGAAGGCTCACTGGTTTACTGATTTCCAGGAACTGGAGTaGTGCAAACTGTATAAAGCC +
Preference number: 5 (lower is better)
Translates to: YRAEASVSLSWKAHWFTDFQELE*CKLYKA
Trigger: GGCTTTATACAGTTTGCACAACTCCAGTTCCTGGAA...ATCAGTAAACCAGTGAGCCTTCCAGGAGAGGCTCACACTGGCCTCTGCCCTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp CTGGATGGGAAGAACAGAAGCTATGTCCACTTTAGGGGCAGATGTGAAGACTATGCCTCTGCATACAGCTaGAGCAAGGCCGTGTCGATG +
Preference number: 5 (lower is better)
Translates to: LDGKNRSYVHFRGRCEDYASAYS*SKAVSM
Trigger: CATCGACACGGCCTTGCTCAAGCTGTATGCAGAGGC...ATAGTCTTCACATCTGCCCCTAAAGTGGACATAGCTTCTGTTCTTCCCATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS TCA 90 bp AGTAGGGAAACAGGTCCTGGGAAAGGCCTGTGCTGTAGTTCAGGATaGTGTATTGTGTGGTCAAGGCCAGGCACAAGAAATAGCCATCCA +
Preference number: 5 (lower is better)
Translates to: SRETGPGKGLCCSSG*CIVWSRPGTRNSHP
Trigger: TGGATGGCTATTTCTTGTGCCTGGCCTTGACCACACAATACATCATCCTGAACTACAGCACAGGCCTTTCCCAGGACCTGTTTCCCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS GCA 90 bp CTGGCTGCTTCTGAAGAGCTCTTTGGCTTCCAGGAACTGGAGTTGTaGAAACTGTATAAAGCCTGCCTGCTGCAGAATCCTCCTGTACAT +
Preference number: 5 (lower is better)
Translates to: LAASEELFGFQELEL*KLYKACLLQNPPVH
Trigger: ATGTACAGGAGGATTCTGCAGCAGGCAGGCTTTATACAGTTTGCACAACTCCAGTTCCTGGAAGCCAAAGAGCTCTTCAGAAGCAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000188728.2
CDS-3UTR CAA 90 bp GCTAGGAGGACAGATTCCTGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGTGTAAACTCCTTTACTaGTGGCAACAATCACTCTTC +
Preference number: 5 (lower is better)
Translates to: ARRTDSCGIASRKQGLPQCKLLY*WQQSLF
Trigger: GAAGAGTGATTGTTGCCACAAGTAAAGGAGTTTACA...CTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACAGGAATCTGTCCTCCTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp TGTGGGATAGCAAGCAGGAAGCAAGGACTGCCCCAGTTGTGCAACAGGTGCCGTTGTAAACTCCTTTACTaGTGGCAACAATCACTCTTC +
Preference number: 5 (lower is better)
Translates to: CGIASRKQGLPQLCNRCRCKLLY*WQQSLF
Trigger: GAAGAGTGATTGTTGCCACAAGTAAAGGAGTTTACA...ACGGCACCTGTTGCACAACTGGGGCAGTCCTTGCTTCCTGCTTGCTATCCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp TACCAAGTCCAGTTGGTCACAGATGAGACCTTTCCTCTGAGGGTTCAGGAAAGCCCTGAAATTTCTCCTTaGGAATGTTCCTCCGGGCTC +
Preference number: 5 (lower is better)
Translates to: YQVQLVTDETFPLRVQESPEISP*ECSSGL
Trigger: GAGCCCGGAGGAACATTCCAAAGGAGAAATTTCAGG...GCTTTCCTGAACCCTCAGAGGAAAGGTCTCATCTGTGACCAACTGGACTTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp TTGAATTCAGGTTGTCAGGCTTGGTGGCAAGTGCCTTTGCCCACTGAATCATTTCTCATGAGGAAGCGCTaGCACTTGGCCATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LNSGCQAWWQVPLPTESFLMRKR*HLAIFS
Trigger: GGAGAAGATGGCCAAGTGCAAGCGCTTCCTCATGAG...AAATGATTCAGTGGGCAAAGGCACTTGCCACCAAGCCTGACAACCTGAATTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp AAGAGCTGCAGTTTGTCTGTGACAATGACAGATACCAAGTCCAGTTGGTCACAGAGTAGTCTCCGGAGTTaGGCCTGTGTCTCAGTGGCT +
Preference number: 5 (lower is better)
Translates to: KSCSLSVTMTDTKSSWSQSSLRS*ACVSVA
Trigger: AGCCACTGAGACACAGGCCAAACTCCGGAGACTACT...CTGTGACCAACTGGACTTGGTATCTGTCATTGTCACAGACAAACTGCAGCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp TTGAATTCAGGTTGTCAGGCTTGGTGGCAAGTGCCTTTGCCCACTGAATCATTTATCAGGTTTTCTGATTaGGCCAGGCCAAGGGCCACC +
Preference number: 5 (lower is better)
Translates to: LNSGCQAWWQVPLPTESFIRFSD*ARPRAT
Trigger: GGTGGCCCTTGGCCTGGCCAAATCAGAAAACCTGAT...AAATGATTCAGTGGGCAAAGGCACTTGCCACCAAGCCTGACAACCTGAATTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS TCA 90 bp ATTGCCCTTCAGCTTCATCTTATCATACATGTAAATCAGGTTTTCTaGTTTGGCCAGGCCAAGGGCCACCTGTGTGGTCCTCCTGGCATG +
Preference number: 5 (lower is better)
Translates to: IALQLHLIIHVNQVF*FGQAKGHLCGPPGM
Trigger: CATGCCAGGAGGACCACACAGGTGGCCCTTGGCCTGGCCAAATCAGAAAACCTGATTTACATGTATGATAAGATGAAGCTGAAGGGCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp TTGAATTCAGGTTGTCAGGCTTGGTGGCAAGTGCCTTTGCCCACTGAATCATTTACCAGGGTTATAGAGTaGTCACAGAGCACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LNSGCQAWWQVPLPTESFTRVIE*SQSTSS
Trigger: GCTGCTGGTGCTCTGTGACAACTCTATAACCCTGGT...AAATGATTCAGTGGGCAAAGGCACTTGCCACCAAGCCTGACAACCTGAATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp TGTTTCCCAGGGATAGCATCTTCCTGGCACCCAGATGCCTCCCCTTTGTTCTGGTCTCTTGGTGAAAATTaGAACTCCAATCTCCTCACT +
Preference number: 5 (lower is better)
Translates to: CFPGIASSWHPDASPLFWSLGEN*NSNLLT
Trigger: AGTGAGGAGATTGGAGTTCAAATTTTCACCAAGAGA...CCAGAACAAAGGGGAGGCATCTGGGTGCCAGGAAGATGCTATCCCTGGGAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp AAGAGCTGCAGTTTGTCTGTGACAATGACAGATACCAAGTCCAGTTGGTCACAGTGTCTGTGTAGCTGTTaGGTGGCAACGAATGTAGCT +
Preference number: 5 (lower is better)
Translates to: KSCSLSVTMTDTKSSWSQCLCSC*VATNVA
Trigger: AGCTACATTCGTTGCCACCAAACAGCTACACAGACA...CTGTGACCAACTGGACTTGGTATCTGTCATTGTCACAGACAAACTGCAGCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp TTGAATTCAGGTTGTCAGGCTTGGTGGCAAGTGCCTTTGCCCACTGAATCATTTCCTCCACTCTCCGGTTaGCTAACAGATCCTGTATTT +
Preference number: 5 (lower is better)
Translates to: LNSGCQAWWQVPLPTESFPPLSG*LTDPVF
Trigger: AAATACAGGATCTGTTAGCAAACCGGAGAGTGGAGG...AAATGATTCAGTGGGCAAAGGCACTTGCCACCAAGCCTGACAACCTGAATTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS-3UTR CAA 90 bp TTGAATTCAGGTTGTCAGGCTTGGTGGCAAGTGCCTTTGCCCACTGAATCATTTTCTCTTGGTGAAAATTaGAACTCCAATCTCCTCACT +
Preference number: 5 (lower is better)
Translates to: LNSGCQAWWQVPLPTESFSLGEN*NSNLLT
Trigger: AGTGAGGAGATTGGAGTTCAAATTTTCACCAAGAGA...AAATGATTCAGTGGGCAAAGGCACTTGCCACCAAGCCTGACAACCTGAATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS GCA 72 bp GGCGAGCAACGTGTGGAAGAGGCGCTGACGGCAGGCTaGACCCTGACCCTCGGAGCTCCACAGGCAGTAGTC +
Preference number: 6 (lower is better)
Translates to: GEQRVEEALTAG*TLTLGAPQAVV
Trigger: GACTACTGCCTGTGGAGCTCCGAGGGTCAGGGTGCAGCCTGCCGTCAGCGCCTCTTCCACACGTTGCTCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS GCA 72 bp GCTGCAGAGAAGTCCCCCATCTCGTGCACCAGGATGTaGAGGGCCTTCTCGTGCTCGCCCAGCTTCCCGTGG +
Preference number: 6 (lower is better)
Translates to: AAEKSPISCTRM*RAFSCSPSFPW
Trigger: CCACGGGAAGCTGGGCGAGCACGAGAAGGCCCTGCACATCCTGGTGCACGAGATGGGGGACTTCTCTGCAGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CCA 72 bp TCAGATCCTGGGCAGAGGGGCCTGCACGGAGGTACATaGCGAGCAACGTGTGGAAGAGGCGCTGACGGCAGG +
Preference number: 6 (lower is better)
Translates to: SDPGQRGLHGGT*RATCGRGADGR
Trigger: CCTGCCGTCAGCGCCTCTTCCACACGTTGCTCGCCATGTACCTCCGTGCAGGCCCCTCTGCCCAGGATCTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS GCA 72 bp CACAGCGGCCACTGTCAGATCCTGGGCAGAGGGGCCTaGACGGAGGTACATGGCGAGCAACGTGTGGAAGAG +
Preference number: 6 (lower is better)
Translates to: HSGHCQILGRGA*TEVHGEQRVEE
Trigger: CTCTTCCACACGTTGCTCGCCATGTACCTCCGTGCAGGCCCCTCTGCCCAGGATCTGACAGTGGCCGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CCA 72 bp TGGTTCAGCAAGTCCACAGCGGCCACTGTCAGATCCTaGGCAGAGGGGCCTGCACGGAGGTACATGGCGAGC +
Preference number: 6 (lower is better)
Translates to: WFSKSTAATVRS*AEGPARRYMAS
Trigger: GCTCGCCATGTACCTCCGTGCAGGCCCCTCTGCCCAGGATCTGACAGTGGCCGCTGTGGACTTGCTGAACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CCA 72 bp GGCGAGCTGGGGGCCGTGTGTCTGCTGGCGGCACAGTaGGTGTGCACAAGCCCTCCATTTGGGTATCTGACA +
Preference number: 6 (lower is better)
Translates to: GELGAVCLLAAQ*VCTSPPFGYLT
Trigger: TGTCAGATACCCAAATGGAGGGCTTGTGCACACCCACTGTGCCGCCAGCAGACACACGGCCCCCAGCTCGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS GCA 72 bp CTGACCCTCGGAGCTCCACAGGCAGTAGTCCTCAGCTaGAGAGAAGTCCCCCATCTCGTGCACCAGGATGTG +
Preference number: 6 (lower is better)
Translates to: LTLGAPQAVVLS*REVPHLVHQDV
Trigger: CACATCCTGGTGCACGAGATGGGGGACTTCTCTGCAGCTGAGGACTACTGCCTGTGGAGCTCCGAGGGTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS GCA 72 bp TCCCTCATAGCCCCCATGAGGAATGGGCAGAGAAGCTaGACGGACCAGGTGTCTGGCAGCAGCTGTAGGACC +
Preference number: 6 (lower is better)
Translates to: SLIAPMRNGQRS*TDQVSGSSCRT
Trigger: GGTCCTACAGCTGCTGCCAGACACCTGGTCCGTGCAGCTTCTCTGCCCATTCCTCATGGGGGCTATGAGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CCA 72 bp GGCATGGATACTGTCCCTCATAGCCCCCATGAGGAATaGGCAGAGAAGCTGCACGGACCAGGTGTCTGGCAG +
Preference number: 6 (lower is better)
Translates to: GMDTVPHSPHEE*AEKLHGPGVWQ
Trigger: CTGCCAGACACCTGGTCCGTGCAGCTTCTCTGCCCATTCCTCATGGGGGCTATGAGGGACAGTATCCATGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS GCA 72 bp GACCAAGAGGTCCAGGAGGCTGTCGTGGTCAGCCTCTaGATACAGCTTGAGCAAGGCCGTGTCGATGTCTTC +
Preference number: 6 (lower is better)
Translates to: DQEVQEAVVVSL*IQLEQGRVDVF
Trigger: GAAGACATCGACACGGCCTTGCTCAAGCTGTATGCAGAGGCTGACCACGACAGCCTCCTGGACCTCTTGGTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000188728.2
CDS CCA 72 bp CCAATCACATTTTCTGACCAGTGCACAGGGGCACGCTaGGAAATCCCGGCCACGGTGGCAAACATGCCCAAG +
Preference number: 6 (lower is better)
Translates to: PITFSDQCTGAR*EIPATVANMPK
Trigger: CTTGGGCATGTTTGCCACCGTGGCCGGGATTTCCCAGCGTGCCCCTGTGCACTGGTCAGAAAATGTGATTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS TCA 72 bp CCAGGAGGCTGTCGTGGTCAGCCTCTGCATACAGCTTaGGCAAGGCCGTGTCGATGTCTTCCTTGTAGCCAT +
Preference number: 6 (lower is better)
Translates to: PGGCRGQPLHTA*ARPCRCLPCSH
Trigger: ATGGCTACAAGGAAGACATCGACACGGCCTTGCTCAAGCTGTATGCAGAGGCTGACCACGACAGCCTCCTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000188728.2
CDS CCA 72 bp CTCATGAGGAAGCGCTTGCACTTGGCCATCTTCTCCTaGTCACCTTGGGTCAGCTGGTTCAGGTCTGCGTAC +
Preference number: 6 (lower is better)
Translates to: LMRKRLHLAIFS*SPWVSWFRSAY
Trigger: GTACGCAGACCTGAACCAGCTGACCCAAGGTGACCAGGAGAAGATGGCCAAGTGCAAGCGCTTCCTCATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000188728.2
CDS CCA 72 bp CCTGTGTCTCAGTGGCTTCTACATCTTTGCCCCCAGTaGATACCCTCTGCCGCAGCACTTCCTCCAGGTAGA +
Preference number: 6 (lower is better)
Translates to: PVSQWLLHLCPQ*IPSAAALPPGR
Trigger: TCTACCTGGAGGAAGTGCTGCGGCAGAGGGTATCCACTGGGGGCAAAGATGTAGAAGCCACTGAGACACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CCA 72 bp TGGAGGATGGCACTTTCCATGGGCAGGCCGGCACCCTaGACTTTCTCTTTCAACAAGTGGACGCGGTACAAG +
Preference number: 6 (lower is better)
Translates to: WRMALSMGRPAP*TFSFNKWTRYK
Trigger: CTTGTACCGCGTCCACTTGTTGAAAGAGAAAGTCCAGGGTGCCGGCCTGCCCATGGAAAGTGCCATCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CAA 90 bp GAGGGGACTGGCTCCAGGTTCAGCATGTTAACCAGGGTTATAGAGTaGTCACAGAGCACCAGCAGCCTATTGAGAGCTGAGGCCGCACAC +
Preference number: 6 (lower is better)
Translates to: EGTGSRFSMLTRVIE*SQSTSSLLRAEAAH
Trigger: GTGTGCGGCCTCAGCTCTCAATAGGCTGCTGGTGCTCTGTGACAACTCTATAACCCTGGTTAACATGCTGAACCTGGAGCCAGTCCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS TCA 72 bp GAGCTGAGGCCGCACACAGCTCGTTCACAGGTTTCTTaGAGCCCAGGTGTCTGTGTAGCTGTTTGGTGGCAA +
Preference number: 6 (lower is better)
Translates to: ELRPHTARSQVS*SPGVCVAVWWQ
Trigger: TTGCCACCAAACAGCTACACAGACACCTGGGCTTCAAGAAACCTGTGAACGAGCTGTGTGCGGCCTCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000189010.2
CDS TCA 72 bp CACTGCAAATGTTGTAGCCCCTTTGATGCGGGCTCCTaGGGGGACTGGCTCCAGGTTCAGCATGTTAACCAG +
Preference number: 6 (lower is better)
Translates to: HCKCCSPFDAGS*GDWLQVQHVNQ
Trigger: CTGGTTAACATGCTGAACCTGGAGCCAGTCCCCTCAGGAGCCCGCATCAAAGGGGCTACAACATTTGCAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS TCA 72 bp CGGACCAGGTGTCTGGCAGCAGCTGTAGGACCTGGGTaGCATCAAATTCCCTGGCATGATGGTTCAGCAAGT +
Preference number: 6 (lower is better)
Translates to: RTRCLAAAVGPG*HQIPWHDGSAS
Trigger: ACTTGCTGAACCATCATGCCAGGGAATTTGATGTCACCCAGGTCCTACAGCTGCTGCCAGACACCTGGTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CCA 72 bp TTCCTGCCACAGCACTCCACACACTCAATGCTGATGTaGTCTCTGTCGCCCATCAGCAGTTCCCGTTCCACT +
Preference number: 6 (lower is better)
Translates to: FLPQHSTHSMLM*SLSPISSSRST
Trigger: AGTGGAACGGGAACTGCTGATGGGCGACAGAGACCACATCAGCATTGAGTGTGTGGAGTGCTGTGGCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000189010.2
CDS CCA 72 bp CAGGAACTCCTGTCTGCCTATCCTCTTGACGATGGGTaGCTTCTCCTCACTGCAGTAGGGAAACAGGTCCTG +
Preference number: 6 (lower is better)
Translates to: QELLSAYPLDDG*LLLTAVGKQVL
Trigger: CAGGACCTGTTTCCCTACTGCAGTGAGGAGAAGCCACCCATCGTCAAGAGGATAGGCAGACAGGAGTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CCA 72 bp AAATTCTCAGTGACCAAGAGGTCCAGGAGGCTGTCGTaGTCAGCCTCTGCATACAGCTTGAGCAAGGCCGTG +
Preference number: 6 (lower is better)
Translates to: KFSVTKRSRRLS*SASAYSLSKAV
Trigger: CACGGCCTTGCTCAAGCTGTATGCAGAGGCTGACCACGACAGCCTCCTGGACCTCTTGGTCACTGAGAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000188728.2
CDS CCA 72 bp GGGTATCTGACAAACACAGGTTCACCGAAAGGGTTCTaGCAGAGCTGGCAAAGCTCTCGTTCTGAGAGCCGG +
Preference number: 6 (lower is better)
Translates to: GYLTNTGSPKGF*QSWQSSRSESR
Trigger: CCGGCTCTCAGAACGAGAGCTTTGCCAGCTCTGCCAGAACCCTTTCGGTGAACCTGTGTTTGTCAGATACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CCA 72 bp GCTGGCGGCACAGTGGGTGTGCACAAGCCCTCCATTTaGGTATCTGACAAACACAGGTTCACCGAAAGGGTT +
Preference number: 6 (lower is better)
Translates to: AGGTVGVHKPSI*VSDKHRFTERV
Trigger: AACCCTTTCGGTGAACCTGTGTTTGTCAGATACCCAAATGGAGGGCTTGTGCACACCCACTGTGCCGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS TCA 72 bp CCACAGCAAGAGGCTGCTCTGGGGTGGACACTTCCTTaGCAATCTGCACTCGGTCCTCATACACCAGAAACA +
Preference number: 6 (lower is better)
Translates to: PQQEAALGWTLP*QSALGPHTPET
Trigger: TGTTTCTGGTGTATGAGGACCGAGTGCAGATTGTCAAGGAAGTGTCCACCCCAGAGCAGCCTCTTGCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS TCA 72 bp AGCTGTAGGACCTGGGTGACATCAAATTCCCTGGCATaGTGGTTCAGCAAGTCCACAGCGGCCACTGTCAGA +
Preference number: 6 (lower is better)
Translates to: SCRTWVTSNSLA*WFSKSTAATVR
Trigger: TCTGACAGTGGCCGCTGTGGACTTGCTGAACCATCATGCCAGGGAATTTGATGTCACCCAGGTCCTACAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS GCA 72 bp GTGGTCTCTGTCGCCCATCAGCAGTTCCCGTTCCACTaGAGAGACCAAGGTGAAGGCCTTGATGTTCATCAT +
Preference number: 6 (lower is better)
Translates to: VVSVAHQQFPFH*RDQGEGLDVHH
Trigger: ATGATGAACATCAAGGCCTTCACCTTGGTCTCTGCAGTGGAACGGGAACTGCTGATGGGCGACAGAGACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000189010.2
CDS CCA 72 bp ATACCCTCTGCCGCAGCACTTCCTCCAGGTAGAGGATaGCAAGGTGGGTGTGGTACTCTTCTTTCTGCAATC +
Preference number: 6 (lower is better)
Translates to: IPSAAALPPGRG*QGGCGTLLSAI
Trigger: GATTGCAGAAAGAAGAGTACCACACCCACCTTGCCATCCTCTACCTGGAGGAAGTGCTGCGGCAGAGGGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CCA 72 bp TCTGGAGTAGTCTCCGGAGTTTGGCCTGTGTCTCAGTaGCTTCTACATCTTTGCCCCCAGTGGATACCCTCT +
Preference number: 6 (lower is better)
Translates to: SGVVSGVWPVSQ*LLHLCPQWIPS
Trigger: AGAGGGTATCCACTGGGGGCAAAGATGTAGAAGCCACTGAGACACAGGCCAAACTCCGGAGACTACTCCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CAA 90 bp AGCTCGTTCACAGGTTTCTTGAAGCCCAGGTGTCTGTGTAGCTGTTaGGTGGCAACGAATGTAGCTGTCCCTGTAGGCATGGCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: SSFTGFLKPRCLCSC*VATNVAVPVGMAFS
Trigger: GGAGAAGGCCATGCCTACAGGGACAGCTACATTCGTTGCCACCAAACAGCTACACAGACACCTGGGCTTCAAGAAACCTGTGAACGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000189010.2
CDS TCA 72 bp AAAGATTCCTGCCACAGCACTCCACACACTCAATGCTaGTGTGGTCTCTGTCGCCCATCAGCAGTTCCCGTT +
Preference number: 6 (lower is better)
Translates to: KDSCHSTPHTQC*CGLCRPSAVPV
Trigger: AACGGGAACTGCTGATGGGCGACAGAGACCACATCAGCATTGAGTGTGTGGAGTGCTGTGGCAGGAATCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000189010.2
CDS TCA 72 bp AGAGTTGTCACAGAGCACCAGCAGCCTATTGAGAGCTaGGGCCGCACACAGCTCGTTCACAGGTTTCTTGAA +
Preference number: 6 (lower is better)
Translates to: RVVTEHQQPIES*GRTQLVHRFLE
Trigger: TTCAAGAAACCTGTGAACGAGCTGTGTGCGGCCTCAGCTCTCAATAGGCTGCTGGTGCTCTGTGACAACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000189010.2
CDS TCA 72 bp CTACCTCTGTGCTGCGGATTTCATTCAGGTAGCTCATaGGGAAGCGCTTGCACTTGGCCATCTTCTCCTGGT +
Preference number: 6 (lower is better)
Translates to: LPLCCGFHSGSS*GSACTWPSSPG
Trigger: ACCAGGAGAAGATGGCCAAGTGCAAGCGCTTCCTCATGAGCTACCTGAATGAAATCCGCAGCACAGAGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000188728.2
CDS GCA 72 bp GCAACAATCACTCTTCCTTCAAAGTCCTGCAGGATGTaGCCCTCCTTAAAGGGCAGGGTCTGTTTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: ATITLPSKSCRM*PSLKGRVCFCC
Trigger: GCAGCAGAAACAGACCCTGCCCTTTAAGGAGGGGCACATCCTGCAGGACTTTGAAGGAAGAGTGATTGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000188728.2
CDS CCA 72 bp GGTACAAGTCAGACTTCTGGAGTAGTCTCCGGAGTTTaGCCTGTGTCTCAGTGGCTTCTACATCTTTGCCCC +
Preference number: 6 (lower is better)
Translates to: GTSQTSGVVSGV*PVSQWLLHLCP
Trigger: GGGGCAAAGATGTAGAAGCCACTGAGACACAGGCCAAACTCCGGAGACTACTCCAGAAGTCTGACTTGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CAA 90 bp AGCCTATTGAGAGCTGAGGCCGCACACAGCTCGTTCACAGGTTTCTaGAAGCCCAGGTGTCTGTGTAGCTGTTTGGTGGCAACGAATGTA +
Preference number: 6 (lower is better)
Translates to: SLLRAEAAHSSFTGF*KPRCLCSCLVATNV
Trigger: TACATTCGTTGCCACCAAACAGCTACACAGACACCTGGGCTTCAAGAAACCTGTGAACGAGCTGTGTGCGGCCTCAGCTCTCAATAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000189010.2
CDS CAA 90 bp CACTTCCTTGACAATCTGCACTCGGTCCTCATACACCAGAAACATTaGGACAGTCCTGCGCTTCACGGAAATGATGCACACCTCCACGCA +
Preference number: 6 (lower is better)
Translates to: HFLDNLHSVLIHQKH*DSPALHGNDAHLHA
Trigger: TGCGTGGAGGTGTGCATCATTTCCGTGAAGCGCAGGACTGTCCAAATGTTTCTGGTGTATGAGGACCGAGTGCAGATTGTCAAGGAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CAA 90 bp AAACAGGTCCTGGGAAAGGCCTGTGCTGTAGTTCAGGATGATGTATaGTGTGGTCAAGGCCAGGCACAAGAAATAGCCATCCACAGCCAC +
Preference number: 6 (lower is better)
Translates to: KQVLGKACAVVQDDV*CGQGQAQEIAIHSH
Trigger: GTGGCTGTGGATGGCTATTTCTTGTGCCTGGCCTTGACCACACAATACATCATCCTGAACTACAGCACAGGCCTTTCCCAGGACCTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CAA 90 bp CAGCTGGCTGCTTCTGAAGAGCTCTTTGGCTTCCAGGAACTGGAGTaGTGCAAACTGTATAAAGCCTGCCTGCTGCAGAATCCTCCTGTA +
Preference number: 6 (lower is better)
Translates to: QLAASEELFGFQELE*CKLYKACLLQNPPV
Trigger: TACAGGAGGATTCTGCAGCAGGCAGGCTTTATACAGTTTGCACAACTCCAGTTCCTGGAAGCCAAAGAGCTCTTCAGAAGCAGCCAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000188728.2
CDS GCA 72 bp AGAGGCTGCTCTGGGGTGGACACTTCCTTGACAATCTaGACTCGGTCCTCATACACCAGAAACATTTGGACA +
Preference number: 6 (lower is better)
Translates to: RGCSGVDTSLTI*TRSSYTRNIWT
Trigger: TGTCCAAATGTTTCTGGTGTATGAGGACCGAGTGCAGATTGTCAAGGAAGTGTCCACCCCAGAGCAGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS GCA 72 bp AAATTTCTCCTTTGGAATGTTCCTCCGGGCTCCTTTTaGCAAGACCAAAGCCTCCTCCACTCTCCGGTTTGC +
Preference number: 6 (lower is better)
Translates to: KFLLWNVPPGSF*QDQSLLHSPVC
Trigger: GCAAACCGGAGAGTGGAGGAGGCTTTGGTCTTGGCAAAAGGAGCCCGGAGGAACATTCCAAAGGAGAAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000188728.2
CDS CAA 72 bp ACAGGTTTCTTGAAGCCCAGGTGTCTGTGTAGCTGTTaGGTGGCAACGAATGTAGCTGTCCCTGTAGGCATG +
Preference number: 6 (lower is better)
Translates to: TGFLKPRCLCSC*VATNVAVPVGM
Trigger: CATGCCTACAGGGACAGCTACATTCGTTGCCACCAAACAGCTACACAGACACCTGGGCTTCAAGAAACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000189010.2
CDS CAA 72 bp GGCTCCAGGTTCAGCATGTTAACCAGGGTTATAGAGTaGTCACAGAGCACCAGCAGCCTATTGAGAGCTGAG +
Preference number: 6 (lower is better)
Translates to: GSRFSMLTRVIE*SQSTSSLLRAE
Trigger: CTCAGCTCTCAATAGGCTGCTGGTGCTCTGTGACAACTCTATAACCCTGGTTAACATGCTGAACCTGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CAA 72 bp GAAATTTCTCCTTTGGAATGTTCCTCCGGGCTCCTTTaGCCAAGACCAAAGCCTCCTCCACTCTCCGGTTTG +
Preference number: 6 (lower is better)
Translates to: EISPLECSSGLL*PRPKPPPLSGL
Trigger: CAAACCGGAGAGTGGAGGAGGCTTTGGTCTTGGCAAAAGGAGCCCGGAGGAACATTCCAAAGGAGAAATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000188728.2
CDS CAA 90 bp ATGTTAACCAGGGTTATAGAGTTGTCACAGAGCACCAGCAGCCTATaGAGAGCTGAGGCCGCACACAGCTCGTTCACAGGTTTCTTGAAG +
Preference number: 6 (lower is better)
Translates to: MLTRVIELSQSTSSL*RAEAAHSSFTGFLK
Trigger: CTTCAAGAAACCTGTGAACGAGCTGTGTGCGGCCTCAGCTCTCAATAGGCTGCTGGTGCTCTGTGACAACTCTATAACCCTGGTTAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000189010.2
CDS TCA 72 bp ACAGGTCCTGGGAAAGGCCTGTGCTGTAGTTCAGGATaGTGTATTGTGTGGTCAAGGCCAGGCACAAGAAAT +
Preference number: 6 (lower is better)
Translates to: TGPGKGLCCSSG*CIVWSRPGTRN
Trigger: ATTTCTTGTGCCTGGCCTTGACCACACAATACATCATCCTGAACTACAGCACAGGCCTTTCCCAGGACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CAA 72 bp CTGGGAAAGGCCTGTGCTGTAGTTCAGGATGATGTATaGTGTGGTCAAGGCCAGGCACAAGAAATAGCCATC +
Preference number: 6 (lower is better)
Translates to: LGKACAVVQDDV*CGQGQAQEIAI
Trigger: GATGGCTATTTCTTGTGCCTGGCCTTGACCACACAATACATCATCCTGAACTACAGCACAGGCCTTTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS TCA 72 bp TGCTGCTGCTCGTCCAAAGGTCTCTTGGTGAAAATTTaGACTCCAATCTCCTCACTTTTCTGCAGCAGCCAG +
Preference number: 6 (lower is better)
Translates to: CCCSSKGLLVKI*TPISSLFCSSQ
Trigger: CTGGCTGCTGCAGAAAAGTGAGGAGATTGGAGTTCAAATTTTCACCAAGAGACCTTTGGACGAGCAGCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CAA 90 bp ACATTACCTGAAATTTCTCCTTTGGAATGTTCCTCCGGGCTCCTTTaGCCAAGACCAAAGCCTCCTCCACTCTCCGGTTTGCTAACAGAT +
Preference number: 6 (lower is better)
Translates to: TLPEISPLECSSGLL*PRPKPPPLSGLLTD
Trigger: ATCTGTTAGCAAACCGGAGAGTGGAGGAGGCTTTGGTCTTGGCAAAAGGAGCCCGGAGGAACATTCCAAAGGAGAAATTTCAGGTAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000188728.2
CDS TCA 72 bp CAGCTTCATCTTATCATACATGTAAATCAGGTTTTCTaGTTTGGCCAGGCCAAGGGCCACCTGTGTGGTCCT +
Preference number: 6 (lower is better)
Translates to: QLHLIIHVNQVF*FGQAKGHLCGP
Trigger: AGGACCACACAGGTGGCCCTTGGCCTGGCCAAATCAGAAAACCTGATTTACATGTATGATAAGATGAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CAA 72 bp CACAATGTTCACCCACAACTGAACCGCAGAGGCATCTaGTTTGTTGTAATGATAGAGCAGCCCCAGTGCAAA +
Preference number: 6 (lower is better)
Translates to: HNVHPQLNRRGI*FVVMIEQPQCK
Trigger: TTTGCACTGGGGCTGCTCTATCATTACAACAAACAAGATGCCTCTGCGGTTCAGTTGTGGGTGAACATTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
CDS CAA 72 bp CTTTTGCCAAGACCAAAGCCTCCTCCACTCTCCGGTTaGCTAACAGATCCTGTATTTGTTTTTCCAGAGGTA +
Preference number: 6 (lower is better)
Translates to: LLPRPKPPPLSG*LTDPVFVFPEV
Trigger: TACCTCTGGAAAAACAAATACAGGATCTGTTAGCAAACCGGAGAGTGGAGGAGGCTTTGGTCTTGGCAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000188728.2
CDS CAA 90 bp TTTGTTTTTCCAGAGGTAATGGAACCAAGATGTAAACTCCTTTACTaGTGGCAACAATCACTCTTCCTTCAAAGTCCTGCAGGATGTGCC +
Preference number: 6 (lower is better)
Translates to: FVFPEVMEPRCKLLY*WQQSLFLQSPAGCA
Trigger: GGCACATCCTGCAGGACTTTGAAGGAAGAGTGATTGTTGCCACAAGTAAAGGAGTTTACATCTTGGTTCCATTACCTCTGGAAAAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7
ENSMUST00000188728.2
CDS GCA 72 bp AGGGAACTAATAATGTTGTCTGGATTAAAACTAGTCTaGTGCTGCTCGTCCAAAGGTCTCTTGGTGAAAATT +
Preference number: 6 (lower is better)
Translates to: RELIMLSGLKLV*CCSSKGLLVKI
Trigger: AATTTTCACCAAGAGACCTTTGGACGAGCAGCAGCAGACTAGTTTTAATCCAGACAACATTATTAGTTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095014.8
ENSMUST00000186694.7