RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TGFBR3L (Mus musculus)

Ensembl gene IDs: ENSMUSG00000089736

Ensembl transcript IDs: ENSMUST00000110993.2

Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp GGGAGTGAGGACAGGGAGAGGGGAGAGAAGACACGCAGGAGGCCTTCTGAACGGCGGTGCAGGCTCCAGTaGTGCAGGGGCTGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: GSEDRERGEKTRRRPSERRCRLQ*CRGWSG
Trigger: CCCGCTCCAGCCCCTGCAGCACTGGAGCCTGCACCG...CCGTTCAGAAGGCCTCCTGCGTGTCTTCTCTCCCCTCTCCCTGTCCTCACTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS-3UTR CCA 90 bp GGGAGTGAGGACAGGGAGAGGGGAGAGAAGACACGCAGGAGGCCTTCTGAACGGCGCCGGAACCTCCAGTaGCCCTGCGCGGCGAGGGAA +
Preference number: 4 (lower is better)
Translates to: GSEDRERGEKTRRRPSERRRNLQ*PCAARE
Trigger: TTCCCTCGCCGCGCAGGGCCACTGGAGGTTCCGGCG...CCGTTCAGAAGGCCTCCTGCGTGTCTTCTCTCCCCTCTCCCTGTCCTCACTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS-3UTR CCA 90 bp GGGAGTGAGGACAGGGAGAGGGGAGAGAAGACACGCAGGAGGCCTTCTGAACGGCAGTGCTGCAGGGGCTaGAGCGGGTGGCTCCGGGTG +
Preference number: 4 (lower is better)
Translates to: GSEDRERGEKTRRRPSERQCCRG*SGWLRV
Trigger: CACCCGGAGCCACCCGCTCCAGCCCCTGCAGCACTG...CCGTTCAGAAGGCCTCCTGCGTGTCTTCTCTCCCCTCTCCCTGTCCTCACTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS-3UTR GCA 90 bp GGGAGTGAGGACAGGGAGAGGGGAGAGAAGACACGCAGGAGGCCTTCTGAACGGTGCAGGCTCCAGTGCTaGAGGGGCTGGAGCGGGTGG +
Preference number: 4 (lower is better)
Translates to: GSEDRERGEKTRRRPSERCRLQC*RGWSGW
Trigger: CCACCCGCTCCAGCCCCTGCAGCACTGGAGCCTGCA...CCGTTCAGAAGGCCTCCTGCGTGTCTTCTCTCCCCTCTCCCTGTCCTCACTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS-3UTR CCA 90 bp GGGAGTGAGGACAGGGAGAGGGGAGAGAAGACACGCAGGAGGCCTTCTGAACGGCCTACTGGGGGTCTCTaGAGCTGGGGGCCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: GSEDRERGEKTRRRPSERPTGGL*SWGPLR
Trigger: TCTCAGCGGCCCCCAGCTCCAGAGACCCCCAGTAGG...CCGTTCAGAAGGCCTCCTGCGTGTCTTCTCTCCCCTCTCCCTGTCCTCACTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS-3UTR TCA 90 bp GGGAGTGAGGACAGGGAGAGGGGAGAGAAGACACGCAGGAGGCCTTCTGAACGGCGGGCGTGGAGGTGGTaGGAAGCTGACAGAGTCGTC +
Preference number: 4 (lower is better)
Translates to: GSEDRERGEKTRRRPSERRAWRW*EADRVV
Trigger: GACGACTCTGTCAGCTTCTCACCACCTCCACGCCCG...CCGTTCAGAAGGCCTCCTGCGTGTCTTCTCTCCCCTCTCCCTGTCCTCACTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS-3UTR CCA 90 bp GGGAGTGAGGACAGGGAGAGGGGAGAGAAGACACGCAGGAGGCCTTCTGAACGGGCCATCTCTGCCTACTaGGGGTCTCTGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GSEDRERGEKTRRRPSERAISAY*GSLELG
Trigger: CCCCAGCTCCAGAGACCCCCAGTAGGCAGAGATGGC...CCGTTCAGAAGGCCTCCTGCGTGTCTTCTCTCCCCTCTCCCTGTCCTCACTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS-3UTR TCA 90 bp GGGAGTGAGGACAGGGAGAGGGGAGAGAAGACACGCAGGAGGCCTTCTGAACGGGACGGCGGCAACGGCTaGTCTGGCAGTGCAAGAACT +
Preference number: 4 (lower is better)
Translates to: GSEDRERGEKTRRRPSERDGGNG*SGSART
Trigger: AGTTCTTGCACTGCCAGATCAGCCGTTGCCGCCGTC...CCGTTCAGAAGGCCTCCTGCGTGTCTTCTCTCCCCTCTCCCTGTCCTCACTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS-3UTR GCA 90 bp GGGAGTGAGGACAGGGAGAGGGGAGAGAAGACACGCAGGAGGCCTTCTGAACGGGGGTGGTGCCATCTCTaGCTACTGGGGGTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: GSEDRERGEKTRRRPSERGWCHL*LLGVSG
Trigger: TCCAGAGACCCCCAGTAGGCAGAGATGGCACCACCC...CCGTTCAGAAGGCCTCCTGCGTGTCTTCTCTCCCCTCTCCCTGTCCTCACTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS-3UTR CCA 90 bp GGGAGTGAGGACAGGGAGAGGGGAGAGAAGACACGCAGGAGGCCTTCTGAACGGTGGGGTCAAAGGCACTaGTGTCAGGCGGACAGCTCG +
Preference number: 4 (lower is better)
Translates to: GSEDRERGEKTRRRPSERWGQRH*CQADSS
Trigger: CGAGCTGTCCGCCTGACACCAGTGCCTTTGACCCCA...CCGTTCAGAAGGCCTCCTGCGTGTCTTCTCTCCCCTCTCCCTGTCCTCACTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS-3UTR TCA 90 bp GGGAGTGAGGACAGGGAGAGGGGAGAGAAGACACGCAGGAGGCCTTCTGAACGGCTGATAACTCCAGACTaGAAAGGGGTCTGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: GSEDRERGEKTRRRPSERLITPD*KGVCAA
Trigger: GGCTGCGCAGACCCCTTTTCAGTCTGGAGTTATCAG...CCGTTCAGAAGGCCTCCTGCGTGTCTTCTCTCCCCTCTCCCTGTCCTCACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS GCA 90 bp CGCAGCACCCAGCACGAAGGCCGCCAACACCAATGCCACCACCGGTaGAGGCTCCAGTGCTGCAGGGGCTGGAGCGGGTGGCTCCGGGTG +
Preference number: 5 (lower is better)
Translates to: RSTQHEGRQHQCHHR*RLQCCRGWSGWLRV
Trigger: CACCCGGAGCCACCCGCTCCAGCCCCTGCAGCACTGGAGCCTGCACCGGTGGTGGCATTGGTGTTGGCGGCCTTCGTGCTGGGTGCTGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS CCA 90 bp CCCCATCTCGGTGAAGGACGGGCCAGGGCCGCCTGCACAAACACATaGCTGTCCGCCGGAACCTCCAGTGGCCCTGCGCGGCGAGGGAAC +
Preference number: 5 (lower is better)
Translates to: PHLGEGRARAACTNT*LSAGTSSGPARRGN
Trigger: GTTCCCTCGCCGCGCAGGGCCACTGGAGGTTCCGGCGGACAGCCATGTGTTTGTGCAGGCGGCCCTGGCCCGTCCTTCACCGAGATGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS CCA 90 bp TGCCACCACCGGTGCAGGCTCCAGTGCTGCAGGGGCTGGAGCGGGTaGCTCCGGGTGTACCGACCTGCCTGGGAGACTCTTGGATGGCCT +
Preference number: 5 (lower is better)
Translates to: CHHRCRLQCCRGWSG*LRVYRPAWETLGWP
Trigger: AGGCCATCCAAGAGTCTCCCAGGCAGGTCGGTACACCCGGAGCCACCCGCTCCAGCCCCTGCAGCACTGGAGCCTGCACCGGTGGTGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS GCA 90 bp CAGGGGCCAGGCGCCCCAGGTAACAGAGGTGCACGTGGTGTACCGTaGTTACTGGAGGTCCCAGGGAGCAGGGCCAGGAGCAGGAGCGCA +
Preference number: 5 (lower is better)
Translates to: QGPGAPGNRGARGVP*LLEVPGSRARSRSA
Trigger: TGCGCTCCTGCTCCTGGCCCTGCTCCCTGGGACCTCCAGTAAGCACGGTACACCACGTGCACCTCTGTTACCTGGGGCGCCTGGCCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS CCA 90 bp CAGGCGCCCCAGGTAACAGAGGTGCACGTGGTGTACCGTGCTTACTaGAGGTCCCAGGGAGCAGGGCCAGGAGCAGGAGCGCAGTGCCCA +
Preference number: 5 (lower is better)
Translates to: QAPQVTEVHVVYRAY*RSQGAGPGAGAQCP
Trigger: TGGGCACTGCGCTCCTGCTCCTGGCCCTGCTCCCTGGGACCTCCAGTAAGCACGGTACACCACGTGCACCTCTGTTACCTGGGGCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS CCA 90 bp CAACACCAATGCCACCACCGGTGCAGGCTCCAGTGCTGCAGGGGCTaGAGCGGGTGGCTCCGGGTGTACCGACCTGCCTGGGAGACTCTT +
Preference number: 5 (lower is better)
Translates to: QHQCHHRCRLQCCRG*SGWLRVYRPAWETL
Trigger: AAGAGTCTCCCAGGCAGGTCGGTACACCCGGAGCCACCCGCTCCAGCCCCTGCAGCACTGGAGCCTGCACCGGTGGTGGCATTGGTGTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS TCA 90 bp GGTGGGGTCAAAGGCACTGGTGTCAGGCGGACAGCTCGGCGGTGGTaGCTGCTGCGACGGCGGCAACGGCTGATCTGGCAGTGCAAGAAC +
Preference number: 5 (lower is better)
Translates to: GGVKGTGVRRTARRW*LLRRRQRLIWQCKN
Trigger: GTTCTTGCACTGCCAGATCAGCCGTTGCCGCCGTCGCAGCAGTCACCACCGCCGAGCTGTCCGCCTGACACCAGTGCCTTTGACCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS CCA 90 bp TGCTGCAGGGGCTGGAGCGGGTGGCTCCGGGTGTACCGACCTGCCTaGGAGACTCTTGGATGGCCTAGGGGACGGACGAGGTATTGTGAC +
Preference number: 5 (lower is better)
Translates to: CCRGWSGWLRVYRPA*ETLGWPRGRTRYCD
Trigger: GTCACAATACCTCGTCCGTCCCCTAGGCCATCCAAGAGTCTCCCAGGCAGGTCGGTACACCCGGAGCCACCCGCTCCAGCCCCTGCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS GCA 90 bp TCAGCATGTGCAGGTGGGGGCTGTCGGTACCAAGGCTCAAGCTGCTaGCCGCACATGCCTCATCCTGAGGCAGACACCGCAATGGTGCTG +
Preference number: 5 (lower is better)
Translates to: SACAGGGCRYQGSSC*PHMPHPEADTAMVL
Trigger: CAGCACCATTGCGGTGTCTGCCTCAGGATGAGGCATGTGCGGGCAGCAGCTTGAGCCTTGGTACCGACAGCCCCCACCTGCACATGCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS GCA 90 bp GTGTCAGCATGTGCAGGTGGGGGCTGTCGGTACCAAGGCTCAAGCTaGTGCCCGCACATGCCTCATCCTGAGGCAGACACCGCAATGGTG +
Preference number: 5 (lower is better)
Translates to: VSACAGGGCRYQGSS*CPHMPHPEADTAMV
Trigger: CACCATTGCGGTGTCTGCCTCAGGATGAGGCATGTGCGGGCAGCAGCTTGAGCCTTGGTACCGACAGCCCCCACCTGCACATGCTGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS CCA 72 bp TGCCACCACCGGTGCAGGCTCCAGTGCTGCAGGGGCTaGAGCGGGTGGCTCCGGGTGTACCGACCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: CHHRCRLQCCRG*SGWLRVYRPAW
Trigger: CCAGGCAGGTCGGTACACCCGGAGCCACCCGCTCCAGCCCCTGCAGCACTGGAGCCTGCACCGGTGGTGGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS GCA 72 bp CAGCACGAAGGCCGCCAACACCAATGCCACCACCGGTaGAGGCTCCAGTGCTGCAGGGGCTGGAGCGGGTGG +
Preference number: 6 (lower is better)
Translates to: QHEGRQHQCHHR*RLQCCRGWSGW
Trigger: CCACCCGCTCCAGCCCCTGCAGCACTGGAGCCTGCACCGGTGGTGGCATTGGTGTTGGCGGCCTTCGTGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS GCA 72 bp GGCGCCCCAGGTAACAGAGGTGCACGTGGTGTACCGTaGTTACTGGAGGTCCCAGGGAGCAGGGCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: GAPGNRGARGVP*LLEVPGSRARS
Trigger: GCTCCTGGCCCTGCTCCCTGGGACCTCCAGTAAGCACGGTACACCACGTGCACCTCTGTTACCTGGGGCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS CCA 72 bp CTGCACAAACACATGGCTGTCCGCCGGAACCTCCAGTaGCCCTGCGCGGCGAGGGAACGCGTCCTCTGCATC +
Preference number: 6 (lower is better)
Translates to: LHKHMAVRRNLQ*PCAARERVLCI
Trigger: GATGCAGAGGACGCGTTCCCTCGCCGCGCAGGGCCACTGGAGGTTCCGGCGGACAGCCATGTGTTTGTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS CCA 72 bp GTGGTGCCATCTCTGCCTACTGGGGGTCTCTGGAGCTaGGGGCCGCTGAGAGAAGCTCTAGGAGGCGGGCCT +
Preference number: 6 (lower is better)
Translates to: VVPSLPTGGLWS*GPLREALGGGP
Trigger: AGGCCCGCCTCCTAGAGCTTCTCTCAGCGGCCCCCAGCTCCAGAGACCCCCAGTAGGCAGAGATGGCACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS GCA 72 bp GCAGGTGGGGGCTGTCGGTACCAAGGCTCAAGCTGCTaGCCGCACATGCCTCATCCTGAGGCAGACACCGCA +
Preference number: 6 (lower is better)
Translates to: AGGGCRYQGSSC*PHMPHPEADTA
Trigger: TGCGGTGTCTGCCTCAGGATGAGGCATGTGCGGGCAGCAGCTTGAGCCTTGGTACCGACAGCCCCCACCTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS TCA 72 bp GAGGGAACGCGTCCTCTGCATCTGATAACTCCAGACTaGAAAGGGGTCTGCGCAGCCAGGGGCCAGGCGCCC +
Preference number: 6 (lower is better)
Translates to: EGTRPLHLITPD*KGVCAARGQAP
Trigger: GGGCGCCTGGCCCCTGGCTGCGCAGACCCCTTTTCAGTCTGGAGTTATCAGATGCAGAGGACGCGTTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS GCA 72 bp TGTGCAGGTGGGGGCTGTCGGTACCAAGGCTCAAGCTaGTGCCCGCACATGCCTCATCCTGAGGCAGACACC +
Preference number: 6 (lower is better)
Translates to: CAGGGCRYQGSS*CPHMPHPEADT
Trigger: GGTGTCTGCCTCAGGATGAGGCATGTGCGGGCAGCAGCTTGAGCCTTGGTACCGACAGCCCCCACCTGCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS CCA 72 bp CAGACACCGCAATGGTGCTGGTGGGGTCAAAGGCACTaGTGTCAGGCGGACAGCTCGGCGGTGGTGACTGCT +
Preference number: 6 (lower is better)
Translates to: QTPQWCWWGQRH*CQADSSAVVTA
Trigger: AGCAGTCACCACCGCCGAGCTGTCCGCCTGACACCAGTGCCTTTGACCCCACCAGCACCATTGCGGTGTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS GCA 72 bp GCTGTCGGTACCAAGGCTCAAGCTGCTGCCCGCACATaGCTCATCCTGAGGCAGACACCGCAATGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: AVGTKAQAAART*LILRQTPQWCW
Trigger: CCAGCACCATTGCGGTGTCTGCCTCAGGATGAGGCATGTGCGGGCAGCAGCTTGAGCCTTGGTACCGACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS CCA 72 bp TGCCTCATCCTGAGGCAGACACCGCAATGGTGCTGGTaGGGTCAAAGGCACTGGTGTCAGGCGGACAGCTCG +
Preference number: 6 (lower is better)
Translates to: CLILRQTPQWCW*GQRHWCQADSS
Trigger: CGAGCTGTCCGCCTGACACCAGTGCCTTTGACCCCACCAGCACCATTGCGGTGTCTGCCTCAGGATGAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS CAA 90 bp CGGCGGCAACGGCTGATCTGGCAGTGCAAGAACTGTACTGAGGCATaGAATACCGGACGCAGGCGAAAGCTGAAGCGTGAGACGCTAGCA +
Preference number: 6 (lower is better)
Translates to: RRQRLIWQCKNCTEA*NTGRRRKLKRETLA
Trigger: TGCTAGCGTCTCACGCTTCAGCTTTCGCCTGCGTCCGGTATTCAATGCCTCAGTACAGTTCTTGCACTGCCAGATCAGCCGTTGCCGCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS TCA 72 bp GCGGCAACGGCTGATCTGGCAGTGCAAGAACTGTACTaGGGCATTGAATACCGGACGCAGGCGAAAGCTGAA +
Preference number: 6 (lower is better)
Translates to: AATADLAVQELY*GIEYRTQAKAE
Trigger: TTCAGCTTTCGCCTGCGTCCGGTATTCAATGCCTCAGTACAGTTCTTGCACTGCCAGATCAGCCGTTGCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2
CDS CAA 72 bp CGGCTGATCTGGCAGTGCAAGAACTGTACTGAGGCATaGAATACCGGACGCAGGCGAAAGCTGAAGCGTGAG +
Preference number: 6 (lower is better)
Translates to: RLIWQCKNCTEA*NTGRRRKLKRE
Trigger: CTCACGCTTCAGCTTTCGCCTGCGTCCGGTATTCAATGCCTCAGTACAGTTCTTGCACTGCCAGATCAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000110993.2